ClCG05G013640 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG05G013640
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCG_Chr05: 19825948 .. 19826972 (-)
RNA-Seq ExpressionClCG05G013640
SyntenyClCG05G013640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAAGTATTTCAATAAACCTGCAAAGGTAATTCCAAAATGAGTGAGTATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTGTAATTTAAAGCAAACTAGATATTTCATGGCTTGACATGTAGTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGTTATCACAGGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA

mRNA sequence

ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA

Coding sequence (CDS)

ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA

Protein sequence

MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVVSEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAIQT
Homology
BLAST of ClCG05G013640 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-50
Identity = 137/321 (42.68%), Postives = 179/321 (55.76%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
           MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182

Query: 61  KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
           +        GLDE YN V+V              S++L FEKRLKHQN+  K+ G    +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242

Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
            ++N A   + NG +  +   F       NR  +SGQRGN NN             GK  
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNNG------PTCQLCGKYG 302

Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
              L     F+KEFS P  QN+   SS+ S+   NP  F++TQN+ PF  P +T+ DP+W
Sbjct: 303 HSALVCYNRFNKEFSSPLVQNRNEHSSNGSV-SPNPAVFVSTQNATPFATP-DTVVDPNW 362

Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
           Y+DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Sbjct: 363 YIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 408

Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
           CVP IAK+L+S SKL QD  I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 408

BLAST of ClCG05G013640 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-49
Identity = 138/343 (40.23%), Postives = 192/343 (55.98%), Query Frame = 0

Query: 5   VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNN 64
           + +QLMG+  A +LW+A   LF VQSRAEED+L Q              YL++MK +S+ 
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 65  LAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNSA 124
           L QAGSPV  +  +SQ LLGLDE YNPV+               SE+L+FEKRL+HQ++ 
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 125 KSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYN 184
           K+         +N A +R+S+  +  +   F  NN+ N++    GQR         G +N
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQ----GQR---------GGFN 224

Query: 185 NFHGRGKGYAKR-------------LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTA 244
              GRGKG   +             L     F+KEF  P  Q++G  SS+ S    N T 
Sbjct: 225 IGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFS-KHSNLTV 284

Query: 245 FLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK 304
            +  Q+ N F A  +T+ + +WY+DS  TNH+T   +NL+NP+EY G E + +GNG  L 
Sbjct: 285 LVTGQSVNQF-ATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLH 344

Query: 305 ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI 307
           IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD  +
Sbjct: 345 ISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNV 371

BLAST of ClCG05G013640 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-42
Identity = 134/329 (40.73%), Postives = 174/329 (52.89%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
           M + V +Q+MG++T+ ELW A+  LF VQSRAE DYL Q              YLKLMK 
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
           H++NLA AGS V+ + LVSQVL GLDEEYNP+VV              +E+L++EKRL++
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237

Query: 121 QNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNG 180
           QNS KS                    G P NQ    S N ++ RS  + QR NN N  +G
Sbjct: 238 QNSLKS--------------------GIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHG 297

Query: 181 GNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNP 240
            N +    RG GY +        ++   P   Q+K    S+S      P  F A   S  
Sbjct: 298 SNTH----RGGGYQR--GSFGQRNRGRGPQPTQHKNFTPSNS-----GPNVFAAHHTSTT 357

Query: 241 FLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL 300
              P ET+ DPSWY DS  T+HVTAN NN+    +Y G E V + NG+KL ISHIG++ +
Sbjct: 358 VTTP-ETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNI 414

Query: 301 TDGNSKLSLENVLCVPAIAKHLVSTSKLT 302
                 L L++VL VP IAK+L   S  T
Sbjct: 418 HASGGSLKLKDVLRVPDIAKNLDKASGRT 414

BLAST of ClCG05G013640 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-37
Identity = 115/282 (40.78%), Postives = 150/282 (53.19%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
           MT  V +QLMG+    +LWDA    F VQSRAEED+L Q              YL +MK 
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182

Query: 61  HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
           + +NL Q GSPV  + L+SQVLLGLDE YN V+V              S++L FEK LKH
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKH 242

Query: 121 QNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNK 180
           QN+    K  G    + ++N A   + NG +  +   F       NR  +SGQRGN NN 
Sbjct: 243 QNTQKKKKKKGNITQSPALNMAQRFALNGQRNHSNKKFYG----YNRQHFSGQRGNLNNG 302

Query: 181 YNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQN 240
                       GK     L     F+KEFS P  Q++   SS+ S+   NP  F++TQN
Sbjct: 303 ------PTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSV-SPNPAVFVSTQN 362

Query: 241 SNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK 252
           + PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G+
Sbjct: 363 ATPFATP-DTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392

BLAST of ClCG05G013640 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 121/332 (36.45%), Postives = 168/332 (50.60%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYL--------------HQYLKLMKL 60
           MT +V +Q+MG   A +LW +I  LF VQSR EEDYL               +YL+ MK+
Sbjct: 64  MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123

Query: 61  HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
           +++NL QAGSP+  +TLVSQVLLGLDEEYN +V               SE+L +E+RL+H
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEH 183

Query: 121 QNSAKSIGAFRH--TTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKY 180
           Q++ K+   F      S+N   +R  N    +N          +N+S   GQRG      
Sbjct: 184 QSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNS---------SNQSIGGGQRG------ 243

Query: 181 NGGNYNNFHGRGKGYAKRLDILL------------MFDKEFSPPSYQNK----GNGSSSS 240
            GG +    GRG+   K +  +              + ++F P S QNK     N  + +
Sbjct: 244 -GGGHGRGRGRGRNNKKPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKN 303

Query: 241 SLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELV 287
           + P  +PTA      SNPFL   E + D +WY DS  +NHVT++ NNL NP EY      
Sbjct: 304 TQP--HPTALAIAYGSNPFLTRQENMTDANWY-DSGASNHVTSDFNNLGNPIEYS----- 363

BLAST of ClCG05G013640 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.4e-10
Identity = 79/315 (25.08%), Postives = 133/315 (42.22%), Query Frame = 0

Query: 14  TANELWDAIHSLFDVQSRAEEDYLH--------------QYLKLMKLHSNNLAQAGSPVT 73
           TA ++W+ +  ++   S      L                Y++ +    + LA  G P+ 
Sbjct: 105 TAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMD 164

Query: 74  TKTLVSQVLLGLDEEYNPVV-----------VSEILSFEKRLKHQNSAKSIGAFRHTTSI 133
               V +VL  L EEY PV+           ++EI   E+ L H++   ++       S 
Sbjct: 165 HDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEI--HERLLNHESKILAV-------SS 224

Query: 134 NAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFH---GRGKGY 193
                 ++N     N     +NN  N  ++Y  +  NNN+K    +  NFH    + K Y
Sbjct: 225 ATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPY 284

Query: 194 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 253
             +  I  +        S       S +S  P   P+ F   Q     LA     +  +W
Sbjct: 285 LGKCQICGVQGHSAKRCSQLQHFLSSVNSQQP---PSPFTPWQ-PRANLALGSPYSSNNW 344

Query: 254 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 301
            +DS  T+H+T++ NNL+    Y G + V + +G  + ISH G++ L+  +  L+L N+L
Sbjct: 345 LLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNIL 404

BLAST of ClCG05G013640 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07
Identity = 81/309 (26.21%), Postives = 138/309 (44.66%), Query Frame = 0

Query: 14  TANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDE 73
           TA ++W+ +  ++     A   Y H          + LA  G P+     V +VL  L +
Sbjct: 105 TAAQIWETLRKIY-----ANPSYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPD 164

Query: 74  EYNPVV-----------VSEI----LSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNG 133
           +Y PV+           ++EI    ++ E +L   NSA+ +       + N    R++N 
Sbjct: 165 DYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV-----PITANVVTHRNTNT 224

Query: 134 GK-PSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGR-----GKGY-AKRLDI 193
            +  +N+G+ ++ N  NNRS  S Q  ++ ++ +      + GR      +G+ AKR   
Sbjct: 225 NRNQNNRGDNRNYNNNNNRSN-SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQ 284

Query: 194 LLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSV 253
           L  F                S+S      P A LA   ++P+ A        +W +DS  
Sbjct: 285 LHQFQ--------STTNQQQSTSPFTPWQPRANLAV--NSPYNA-------NNWLLDSGA 344

Query: 254 TNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIA 301
           T+H+T++ NNL+    Y G + V I +G  + I+H G++ L   +  L L  VL VP I 
Sbjct: 345 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIH 385

BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.1e-51
Identity = 137/321 (42.68%), Postives = 179/321 (55.76%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
           MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182

Query: 61  KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
           +        GLDE YN V+V              S++L FEKRLKHQN+  K+ G    +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242

Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
            ++N A   + NG +  +   F       NR  +SGQRGN NN             GK  
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNNG------PTCQLCGKYG 302

Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
              L     F+KEFS P  QN+   SS+ S+   NP  F++TQN+ PF  P +T+ DP+W
Sbjct: 303 HSALVCYNRFNKEFSSPLVQNRNEHSSNGSV-SPNPAVFVSTQNATPFATP-DTVVDPNW 362

Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
           Y+DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Sbjct: 363 YIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 408

Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
           CVP IAK+L+S SKL QD  I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 408

BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49
Identity = 138/343 (40.23%), Postives = 192/343 (55.98%), Query Frame = 0

Query: 5   VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNN 64
           + +QLMG+  A +LW+A   LF VQSRAEED+L Q              YL++MK +S+ 
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 65  LAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNSA 124
           L QAGSPV  +  +SQ LLGLDE YNPV+               SE+L+FEKRL+HQ++ 
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 125 KSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYN 184
           K+         +N A +R+S+  +  +   F  NN+ N++    GQR         G +N
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQ----GQR---------GGFN 224

Query: 185 NFHGRGKGYAKR-------------LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTA 244
              GRGKG   +             L     F+KEF  P  Q++G  SS+ S    N T 
Sbjct: 225 IGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFS-KHSNLTV 284

Query: 245 FLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK 304
            +  Q+ N F A  +T+ + +WY+DS  TNH+T   +NL+NP+EY G E + +GNG  L 
Sbjct: 285 LVTGQSVNQF-ATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLH 344

Query: 305 ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI 307
           IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD  +
Sbjct: 345 ISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNV 371

BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-43
Identity = 134/329 (40.73%), Postives = 174/329 (52.89%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
           M + V +Q+MG++T+ ELW A+  LF VQSRAE DYL Q              YLKLMK 
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
           H++NLA AGS V+ + LVSQVL GLDEEYNP+VV              +E+L++EKRL++
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237

Query: 121 QNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNG 180
           QNS KS                    G P NQ    S N ++ RS  + QR NN N  +G
Sbjct: 238 QNSLKS--------------------GIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHG 297

Query: 181 GNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNP 240
            N +    RG GY +        ++   P   Q+K    S+S      P  F A   S  
Sbjct: 298 SNTH----RGGGYQR--GSFGQRNRGRGPQPTQHKNFTPSNS-----GPNVFAAHHTSTT 357

Query: 241 FLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL 300
              P ET+ DPSWY DS  T+HVTAN NN+    +Y G E V + NG+KL ISHIG++ +
Sbjct: 358 VTTP-ETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNI 414

Query: 301 TDGNSKLSLENVLCVPAIAKHLVSTSKLT 302
                 L L++VL VP IAK+L   S  T
Sbjct: 418 HASGGSLKLKDVLRVPDIAKNLDKASGRT 414

BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.0e-38
Identity = 115/282 (40.78%), Postives = 150/282 (53.19%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
           MT  V +QLMG+    +LWDA    F VQSRAEED+L Q              YL +MK 
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182

Query: 61  HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
           + +NL Q GSPV  + L+SQVLLGLDE YN V+V              S++L FEK LKH
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKH 242

Query: 121 QNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNK 180
           QN+    K  G    + ++N A   + NG +  +   F       NR  +SGQRGN NN 
Sbjct: 243 QNTQKKKKKKGNITQSPALNMAQRFALNGQRNHSNKKFYG----YNRQHFSGQRGNLNNG 302

Query: 181 YNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQN 240
                       GK     L     F+KEFS P  Q++   SS+ S+   NP  F++TQN
Sbjct: 303 ------PTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSV-SPNPAVFVSTQN 362

Query: 241 SNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK 252
           + PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G+
Sbjct: 363 ATPFATP-DTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392

BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.9e-31
Identity = 112/321 (34.89%), Postives = 143/321 (44.55%), Query Frame = 0

Query: 1   MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
           MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182

Query: 61  KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
           +        GLDE YN V+V              S++L FEKRLKHQN+  K+ G    +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242

Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
            ++N A   + NG +  +   F       NR  +SGQRGN NN                 
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNN----------------- 302

Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
                                              PT  L                    
Sbjct: 303 ----------------------------------GPTCQLC------------------- 344

Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
             DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Sbjct: 363 --DSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 344

Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
           CVP IAK+L+S SKL QD  I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 344

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902197.11.1e-5042.68PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo][more]
TYK05754.12.6e-4940.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
XP_022151683.11.4e-4240.73uncharacterized protein LOC111019598 [Momordica charantia][more]
KAA0026100.11.0e-3740.78uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa][more]
XP_038905161.11.1e-3636.45uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q94HW29.4e-1025.08Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT947.5e-0726.21Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A1S4E1U65.1e-5142.68uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3C3731.3e-4940.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A6J1DCW46.7e-4340.73uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5A7SIT75.0e-3840.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S4E1U95.9e-3134.89uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..155
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 9..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G013640.1ClCG05G013640.1mRNA