Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAAGTATTTCAATAAACCTGCAAAGGTAATTCCAAAATGAGTGAGTATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTGTAATTTAAAGCAAACTAGATATTTCATGGCTTGACATGTAGTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGTTATCACAGGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA
mRNA sequence
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA
Coding sequence (CDS)
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCTTCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGGAATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCAGCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAACAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCATATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATTGCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGGCAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATTTGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA
Protein sequence
MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVVSEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAIQT
Homology
BLAST of ClCG05G013640 vs. NCBI nr
Match:
XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])
HSP 1 Score: 211.5 bits (537), Expect = 1.1e-50
Identity = 137/321 (42.68%), Postives = 179/321 (55.76%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
MT V +QLMG+ +LWDA F VQSRAEED+L Q L+ TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182
Query: 61 KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
+ GLDE YN V+V S++L FEKRLKHQN+ K+ G +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242
Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
++N A + NG + + F NR +SGQRGN NN GK
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNNG------PTCQLCGKYG 302
Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
L F+KEFS P QN+ SS+ S+ NP F++TQN+ PF P +T+ DP+W
Sbjct: 303 HSALVCYNRFNKEFSSPLVQNRNEHSSNGSV-SPNPAVFVSTQNATPFATP-DTVVDPNW 362
Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
Y+DS TNHVT C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+ L L+N+L
Sbjct: 363 YIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 408
Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
CVP IAK+L+S SKL QD I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 408
BLAST of ClCG05G013640 vs. NCBI nr
Match:
TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 206.8 bits (525), Expect = 2.6e-49
Identity = 138/343 (40.23%), Postives = 192/343 (55.98%), Query Frame = 0
Query: 5 VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNN 64
+ +QLMG+ A +LW+A LF VQSRAEED+L Q YL++MK +S+
Sbjct: 45 IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104
Query: 65 LAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNSA 124
L QAGSPV + +SQ LLGLDE YNPV+ SE+L+FEKRL+HQ++
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164
Query: 125 KSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYN 184
K+ +N A +R+S+ + + F NN+ N++ GQR G +N
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQ----GQR---------GGFN 224
Query: 185 NFHGRGKGYAKR-------------LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTA 244
GRGKG + L F+KEF P Q++G SS+ S N T
Sbjct: 225 IGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFS-KHSNLTV 284
Query: 245 FLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK 304
+ Q+ N F A +T+ + +WY+DS TNH+T +NL+NP+EY G E + +GNG L
Sbjct: 285 LVTGQSVNQF-ATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLH 344
Query: 305 ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI 307
IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD +
Sbjct: 345 ISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNV 371
BLAST of ClCG05G013640 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 184.5 bits (467), Expect = 1.4e-42
Identity = 134/329 (40.73%), Postives = 174/329 (52.89%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
M + V +Q+MG++T+ ELW A+ LF VQSRAE DYL Q YLKLMK
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177
Query: 61 HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
H++NLA AGS V+ + LVSQVL GLDEEYNP+VV +E+L++EKRL++
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237
Query: 121 QNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNG 180
QNS KS G P NQ S N ++ RS + QR NN N +G
Sbjct: 238 QNSLKS--------------------GIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHG 297
Query: 181 GNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNP 240
N + RG GY + ++ P Q+K S+S P F A S
Sbjct: 298 SNTH----RGGGYQR--GSFGQRNRGRGPQPTQHKNFTPSNS-----GPNVFAAHHTSTT 357
Query: 241 FLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL 300
P ET+ DPSWY DS T+HVTAN NN+ +Y G E V + NG+KL ISHIG++ +
Sbjct: 358 VTTP-ETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNI 414
Query: 301 TDGNSKLSLENVLCVPAIAKHLVSTSKLT 302
L L++VL VP IAK+L S T
Sbjct: 418 HASGGSLKLKDVLRVPDIAKNLDKASGRT 414
BLAST of ClCG05G013640 vs. NCBI nr
Match:
KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 168.3 bits (425), Expect = 1.0e-37
Identity = 115/282 (40.78%), Postives = 150/282 (53.19%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
MT V +QLMG+ +LWDA F VQSRAEED+L Q YL +MK
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182
Query: 61 HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
+ +NL Q GSPV + L+SQVLLGLDE YN V+V S++L FEK LKH
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKH 242
Query: 121 QNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNK 180
QN+ K G + ++N A + NG + + F NR +SGQRGN NN
Sbjct: 243 QNTQKKKKKKGNITQSPALNMAQRFALNGQRNHSNKKFYG----YNRQHFSGQRGNLNNG 302
Query: 181 YNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQN 240
GK L F+KEFS P Q++ SS+ S+ NP F++TQN
Sbjct: 303 ------PTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSV-SPNPAVFVSTQN 362
Query: 241 SNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK 252
+ PF P +T+ DP+WY+DS TNHVT C+N+ NP EY G+
Sbjct: 363 ATPFATP-DTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392
BLAST of ClCG05G013640 vs. NCBI nr
Match:
XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])
HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 121/332 (36.45%), Postives = 168/332 (50.60%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYL--------------HQYLKLMKL 60
MT +V +Q+MG A +LW +I LF VQSR EEDYL +YL+ MK+
Sbjct: 64 MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123
Query: 61 HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
+++NL QAGSP+ +TLVSQVLLGLDEEYN +V SE+L +E+RL+H
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEH 183
Query: 121 QNSAKSIGAFRH--TTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKY 180
Q++ K+ F S+N +R N +N +N+S GQRG
Sbjct: 184 QSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNS---------SNQSIGGGQRG------ 243
Query: 181 NGGNYNNFHGRGKGYAKRLDILL------------MFDKEFSPPSYQNK----GNGSSSS 240
GG + GRG+ K + + + ++F P S QNK N + +
Sbjct: 244 -GGGHGRGRGRGRNNKKPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKN 303
Query: 241 SLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELV 287
+ P +PTA SNPFL E + D +WY DS +NHVT++ NNL NP EY
Sbjct: 304 TQP--HPTALAIAYGSNPFLTRQENMTDANWY-DSGASNHVTSDFNNLGNPIEYS----- 363
BLAST of ClCG05G013640 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 9.4e-10
Identity = 79/315 (25.08%), Postives = 133/315 (42.22%), Query Frame = 0
Query: 14 TANELWDAIHSLFDVQSRAEEDYLH--------------QYLKLMKLHSNNLAQAGSPVT 73
TA ++W+ + ++ S L Y++ + + LA G P+
Sbjct: 105 TAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMD 164
Query: 74 TKTLVSQVLLGLDEEYNPVV-----------VSEILSFEKRLKHQNSAKSIGAFRHTTSI 133
V +VL L EEY PV+ ++EI E+ L H++ ++ S
Sbjct: 165 HDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEI--HERLLNHESKILAV-------SS 224
Query: 134 NAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFH---GRGKGY 193
++N N +NN N ++Y + NNN+K + NFH + K Y
Sbjct: 225 ATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPY 284
Query: 194 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 253
+ I + S S +S P P+ F Q LA + +W
Sbjct: 285 LGKCQICGVQGHSAKRCSQLQHFLSSVNSQQP---PSPFTPWQ-PRANLALGSPYSSNNW 344
Query: 254 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 301
+DS T+H+T++ NNL+ Y G + V + +G + ISH G++ L+ + L+L N+L
Sbjct: 345 LLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNIL 404
BLAST of ClCG05G013640 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07
Identity = 81/309 (26.21%), Postives = 138/309 (44.66%), Query Frame = 0
Query: 14 TANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDE 73
TA ++W+ + ++ A Y H + LA G P+ V +VL L +
Sbjct: 105 TAAQIWETLRKIY-----ANPSYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPD 164
Query: 74 EYNPVV-----------VSEI----LSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNG 133
+Y PV+ ++EI ++ E +L NSA+ + + N R++N
Sbjct: 165 DYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV-----PITANVVTHRNTNT 224
Query: 134 GK-PSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGR-----GKGY-AKRLDI 193
+ +N+G+ ++ N NNRS S Q ++ ++ + + GR +G+ AKR
Sbjct: 225 NRNQNNRGDNRNYNNNNNRSN-SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQ 284
Query: 194 LLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSV 253
L F S+S P A LA ++P+ A +W +DS
Sbjct: 285 LHQFQ--------STTNQQQSTSPFTPWQPRANLAV--NSPYNA-------NNWLLDSGA 344
Query: 254 TNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIA 301
T+H+T++ NNL+ Y G + V I +G + I+H G++ L + L L VL VP I
Sbjct: 345 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIH 385
BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 5.1e-51
Identity = 137/321 (42.68%), Postives = 179/321 (55.76%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
MT V +QLMG+ +LWDA F VQSRAEED+L Q L+ TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182
Query: 61 KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
+ GLDE YN V+V S++L FEKRLKHQN+ K+ G +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242
Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
++N A + NG + + F NR +SGQRGN NN GK
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNNG------PTCQLCGKYG 302
Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
L F+KEFS P QN+ SS+ S+ NP F++TQN+ PF P +T+ DP+W
Sbjct: 303 HSALVCYNRFNKEFSSPLVQNRNEHSSNGSV-SPNPAVFVSTQNATPFATP-DTVVDPNW 362
Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
Y+DS TNHVT C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+ L L+N+L
Sbjct: 363 YIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 408
Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
CVP IAK+L+S SKL QD I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 408
BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match:
A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)
HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49
Identity = 138/343 (40.23%), Postives = 192/343 (55.98%), Query Frame = 0
Query: 5 VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNN 64
+ +QLMG+ A +LW+A LF VQSRAEED+L Q YL++MK +S+
Sbjct: 45 IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104
Query: 65 LAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNSA 124
L QAGSPV + +SQ LLGLDE YNPV+ SE+L+FEKRL+HQ++
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164
Query: 125 KSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYN 184
K+ +N A +R+S+ + + F NN+ N++ GQR G +N
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQ----GQR---------GGFN 224
Query: 185 NFHGRGKGYAKR-------------LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTA 244
GRGKG + L F+KEF P Q++G SS+ S N T
Sbjct: 225 IGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFS-KHSNLTV 284
Query: 245 FLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK 304
+ Q+ N F A +T+ + +WY+DS TNH+T +NL+NP+EY G E + +GNG L
Sbjct: 285 LVTGQSVNQF-ATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLH 344
Query: 305 ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI 307
IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD +
Sbjct: 345 ISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNV 371
BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 6.7e-43
Identity = 134/329 (40.73%), Postives = 174/329 (52.89%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
M + V +Q+MG++T+ ELW A+ LF VQSRAE DYL Q YLKLMK
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177
Query: 61 HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
H++NLA AGS V+ + LVSQVL GLDEEYNP+VV +E+L++EKRL++
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237
Query: 121 QNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNG 180
QNS KS G P NQ S N ++ RS + QR NN N +G
Sbjct: 238 QNSLKS--------------------GIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHG 297
Query: 181 GNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNP 240
N + RG GY + ++ P Q+K S+S P F A S
Sbjct: 298 SNTH----RGGGYQR--GSFGQRNRGRGPQPTQHKNFTPSNS-----GPNVFAAHHTSTT 357
Query: 241 FLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL 300
P ET+ DPSWY DS T+HVTAN NN+ +Y G E V + NG+KL ISHIG++ +
Sbjct: 358 VTTP-ETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNI 414
Query: 301 TDGNSKLSLENVLCVPAIAKHLVSTSKLT 302
L L++VL VP IAK+L S T
Sbjct: 418 HASGGSLKLKDVLRVPDIAKNLDKASGRT 414
BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match:
A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 5.0e-38
Identity = 115/282 (40.78%), Postives = 150/282 (53.19%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKL 60
MT V +QLMG+ +LWDA F VQSRAEED+L Q YL +MK
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182
Query: 61 HSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKH 120
+ +NL Q GSPV + L+SQVLLGLDE YN V+V S++L FEK LKH
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKH 242
Query: 121 QNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNK 180
QN+ K G + ++N A + NG + + F NR +SGQRGN NN
Sbjct: 243 QNTQKKKKKKGNITQSPALNMAQRFALNGQRNHSNKKFYG----YNRQHFSGQRGNLNNG 302
Query: 181 YNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQN 240
GK L F+KEFS P Q++ SS+ S+ NP F++TQN
Sbjct: 303 ------PTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSV-SPNPAVFVSTQN 362
Query: 241 SNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK 252
+ PF P +T+ DP+WY+DS TNHVT C+N+ NP EY G+
Sbjct: 363 ATPFATP-DTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392
BLAST of ClCG05G013640 vs. ExPASy TrEMBL
Match:
A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 5.9e-31
Identity = 112/321 (34.89%), Postives = 143/321 (44.55%), Query Frame = 0
Query: 1 MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTT 60
MT V +QLMG+ +LWDA F VQSRAEED+L Q L+ TT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ----------------TT 182
Query: 61 KTLVSQVLLGLDEEYNPVVV--------------SEILSFEKRLKHQNS-AKSIGAFRHT 120
+ GLDE YN V+V S++L FEKRLKHQN+ K+ G +
Sbjct: 183 RK-------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 242
Query: 121 TSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGY 180
++N A + NG + + F NR +SGQRGN NN
Sbjct: 243 PALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQRGNLNN----------------- 302
Query: 181 AKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSW 240
PT L
Sbjct: 303 ----------------------------------GPTCQLC------------------- 344
Query: 241 YVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL 300
DS TNHVT C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+ L L+N+L
Sbjct: 363 --DSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNIL 344
Query: 301 CVPAIAKHLVSTSKLTQDKAI 307
CVP IAK+L+S SKL QD I
Sbjct: 423 CVPDIAKNLISVSKLAQDNHI 344
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016902197.1 | 1.1e-50 | 42.68 | PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo] | [more] |
TYK05754.1 | 2.6e-49 | 40.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
XP_022151683.1 | 1.4e-42 | 40.73 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
KAA0026100.1 | 1.0e-37 | 40.78 | uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa] | [more] |
XP_038905161.1 | 1.1e-36 | 36.45 | uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 9.4e-10 | 25.08 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 7.5e-07 | 26.21 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E1U6 | 5.1e-51 | 42.68 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5D3C373 | 1.3e-49 | 40.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A6J1DCW4 | 6.7e-43 | 40.73 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5A7SIT7 | 5.0e-38 | 40.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S4E1U9 | 5.9e-31 | 34.89 | uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |