ClCG05G011980 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG05G011980
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr05: 14990655 .. 14991053 (-)
RNA-Seq ExpressionClCG05G011980
SyntenyClCG05G011980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCATCAGCTCCAGAAACTGCGCCGGATTAAACGCCGGCAGCTCGCACCCCTCTGGCCGCCACCTCCATCGGAGGAAGCCGGCATCGGGTCGGCCGTACTTAAGGCAGTTCAGATGGTCGTGAATCGCCCAGCAGGTATCATTAGTGTAGGGGAGAGCGGCGTTAGGGTTGGGATTAGGGATCCAATCGCCGATGGCGAGATCGCAGGGGAGGGCGGAGAGAATGGAGAGATTTCCGGAGGTGAAGATTTGGGGGCGGAAGGCGGCGGAAGCGGCGGCGGCAGGGGATTCGAGAGAGGTCTTGAGGAGGAGGAGGGAGTAATTGAGGAGAGGGAAAGAGAGGGGGATGGTGGTGAGGATCAACAAAGCCAATGCTCCGCCGAGAATGGCCATTAG

mRNA sequence

ATGCCTCATCAGCTCCAGAAACTGCGCCGGATTAAACGCCGGCAGCTCGCACCCCTCTGGCCGCCACCTCCATCGGAGGAAGCCGGCATCGGGTCGGCCGTACTTAAGGCAGTTCAGATGGTCGTGAATCGCCCAGCAGGTATCATTAGTGTAGGGGAGAGCGGCGTTAGGGTTGGGATTAGGGATCCAATCGCCGATGGCGAGATCGCAGGGGAGGGCGGAGAGAATGGAGAGATTTCCGGAGGTGAAGATTTGGGGGCGGAAGGCGGCGGAAGCGGCGGCGGCAGGGGATTCGAGAGAGGTCTTGAGGAGGAGGAGGGAGTAATTGAGGAGAGGGAAAGAGAGGGGGATGGTGGTGAGGATCAACAAAGCCAATGCTCCGCCGAGAATGGCCATTAG

Coding sequence (CDS)

ATGCCTCATCAGCTCCAGAAACTGCGCCGGATTAAACGCCGGCAGCTCGCACCCCTCTGGCCGCCACCTCCATCGGAGGAAGCCGGCATCGGGTCGGCCGTACTTAAGGCAGTTCAGATGGTCGTGAATCGCCCAGCAGGTATCATTAGTGTAGGGGAGAGCGGCGTTAGGGTTGGGATTAGGGATCCAATCGCCGATGGCGAGATCGCAGGGGAGGGCGGAGAGAATGGAGAGATTTCCGGAGGTGAAGATTTGGGGGCGGAAGGCGGCGGAAGCGGCGGCGGCAGGGGATTCGAGAGAGGTCTTGAGGAGGAGGAGGGAGTAATTGAGGAGAGGGAAAGAGAGGGGGATGGTGGTGAGGATCAACAAAGCCAATGCTCCGCCGAGAATGGCCATTAG

Protein sequence

MPHQLQKLRRIKRRQLAPLWPPPPSEEAGIGSAVLKAVQMVVNRPAGIISVGESGVRVGIRDPIADGEIAGEGGENGEISGGEDLGAEGGGSGGGRGFERGLEEEEGVIEEREREGDGGEDQQSQCSAENGH
Homology
The following BLAST results are available for this feature:
BLAST of ClCG05G011980 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G011980 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G011980 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G011980 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G011980.1ClCG05G011980.1mRNA