Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATCCAAAACTCAAATCGGTTGCCTTCGTCCCCGACACAAATTACAAATTTATTTATATTTTTTCGCGGCAATTTCTGGAGGGTTCGATGGAGGAGGAGGAGGAGCAAGACCATGGCCTCGCTAATGGAGTTCTTTCCTGCCCTAATCGACTTCCCGGTGATTCTCTCTATTTTATGCATCTGTTTCTACACCCTCGTTTTTTTCACCAAATTGCTACTGATGTTCTTTCTAGGGTTTGCGGGAGCTTTTATCCGCTCGATCTTGATAATGTCCCGTTTCAGTCAAAATAGTTTTGTTGGTTTTGAAATTTTAGACATGCTGTTTTCGTTACTGTATTTGTTTTTTTTTTCCCCTAGTGGATTAGGAAACGAAGATTCGACTAGAAGCTTTCTATTTATTGAGTTTCTAGCTGCAGTATTGAACTGTGTTTGTGCCTCTTAGTTTAACTGCGTCCTTTTGTGGGGGAGGGTAGATGGGATGGTTCATTCTATTTTGTTACTCCTAAGATTCCTTTCGATCTGGGATGTAGTGGTTTGATTCTTGTGATGTTTGTAGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAGAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTAATTTTATTAGTCCCCAATTCAGTCTGAAAAGCACCAATAATTTTCAAATAAGATGGGTTTTGCAATTAAGTATGTGTTAAAAAGAACGGGTTTAGAGTTTTGGACGGGGATATGATGAAATACTTTTTGGAGTATAGAGTTTAGGCTAAAGAATGATGTTACTTATTGTTTATTCTTATGATGATTAGATTTGTTGGGAATTACAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCCAACATGGAGGGCATGTCCCAGAAGGTCCTTACATTCTTCAAAGGTATAAATCAATTGTTACTTTTGCTACATTACATTATAGTTGCTTGCATACAGTAAGCAATAACGTTCTGTCGTGGGGCTCTTGTCCAAACATATTACAACTAGTACAAAGGCTTAAGAGTATATCTATTTTGTGATCCAACAAAAGATTTCTGTTTTCTAGCCATCTAGGCAAGCAAGTATAGGAAATGTGCAATTAGGAAAATAAACAAATAACAAAAATTGCATGGAAAAATAATGTGAACGAAAATCTAATCTAGATTTCCAATTATCCCAGAGAAGTGCTGCTCCTTTATTCAATGCATATGTTCCGAGTCTTCTGACGTTTTTATGCAACTCCTTGATGTCAAATCAGGAAAGTCTCTTCTGTTTCTTTTTCTCCCAAAAATAAATTATGAAGTCCATTTCTTCATTTCTTGGGTATCTAATCCTGGCAAAACATATAATTTGCTTTTCACAGTAAACATATAATAAATTATAAATTGTATGATCTTGTTGTCTCTGATTATCTGTTCTTCCTTTTGTTTTCCTTTGCATTTGCGCTGTAAGTATGTCTTTTGTTGAACTTTCCCTACGGCTCGGTTACATATCAGATAATTTCCACCATTGCTTTATGAGCTCTCACCTCTGTCCTGTAATCCTGTTTATTGTTCTCTTTGAATTGTGAATCTTTTGCCTTGCAGTGGCCAATCGGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGAGCTCTGTCTCAACCAAAAAGTATAATTTGCTTTCTGAAAAATTACATAATTATGGAAATGTTGAAGATCAAAGCACTGAAGACATATGCATTTTTGCTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGTGATTTGCGACATTCCTCTCTTAAGATATGCGCACAAACTATCCTGAATTGTCTACGGCTTTAAGTGGGGAGAAACAATCGATTAATTTTGTTGTAAGTTGTAACTCATATGTTAAAATTAAACTCTTCGGGGAAATTATTATGAATCTGAATCCTTTAATTGATTTACATTTCCTTTCATGGTGAGAAATTCATTATTTTCTTCACATTAATGACTTCATTGGTTTTTTTGAGTCCAAGTGCCATTCATAGATTAATAATAATAATAATATTATTATTATTATTATTATTTTTTTTTAAAGGTTAAAATACGATTTTAGTTCCCATTCTTTGAAGTTTGTTCAATTTTAGTCCTTATACCTTTAATTGTCCAATTTTAGTCCTTGGTCAACAAATCTTAAATTTAGTACTTGGACATTCATTTCTACCGAAATTGGTTAAATAATAACAATAATTTTCATGCAAGGATATATAATGTGTGAACTGTGAACATGTTTTCAAATTTTATATTAAAAATGCTAAAAAATAACAAAATTTTTATAAAATATCAACAATAAAATAGTAGTGGGGACTAAATTTAAGATTTATTGAACATACAAGAACTAAAATTGGACAATTGAGTGTATAAGATGGGGACTAAAATTAAATAAATTTCAAATTATAGGGACTAAAATGGTATTTTAACCTTTTTTTTAAAAAGAAATACCATTCATAGATCTTTGTGCATGCTACGATTTGTTAGATATTTAAATGTTAGGGTTCTCTTTGTTTTTTTTTGAAACATAAACAAAACTTTTCATTGATGAAATGAAAAGAGGCTCAATATACAATATACAAAAGAACAAAATTACAAGAACATAGAAACTTGGGATCAGTAGGTGGATCTATCTAAATATCTCAATTAGGCTTACACATCTATAGCACCCTCGTCACATCCCTATACAAAAGAAGTCCTCCGAATTATCTTGGGAACGTGATTCATAAAGAAGATAAAAACATTCCAATTAAGACAATTATTCTGAATAGAGCAATTTTCAGAGAACTTTGACTGGGAGCTTCATGGAGATGCTTGTAATCTTAGGTATTTTATTTTATCAGTTAGGCTGTTAGTTAGTTACTACGATTAATTTAATTAACTATCTAAATCCCATTAATTCATGATTTAAACCTATATCAAAAGAGTGCTATGAACATAGCTCAACTAGCATAAATTATGAATTATCAAAGGTTAGAGGTTTGAATTCCCACCTCACATATTATTGAACTATAGAAAATAAAAAGTCTACATAGGAAGAGGGAAGGAAGAGTAAGGCTTTCCCTTTTGTACAACTTGTTTTTGATCAATAATAAAGTAACAGCCCCAAGGCTTTTTGACTCCACCACTATTATCTTAAGAAAAAAGGTAGGAGTTCATTTCTTGTCTAGAGTCAATGCTCATCACTAACCTTTTTAATGTTAATCCCAACTAGGATCTGTACTCTGATTATAGAAAAAGTGATGGCACCACCCATAAACCAAAGCACAAATTGTGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCGAGTAGCAGAAACCATTTTGAGGAACCAACTCCCTCTGGTTTTTTTGGGACTGAGGTAAGATATATCATTCTTCTTTCCATCTTACATTTTGAATCTCATTCATTTTTGTCCATGTTGCTATACTTCATAGGATAACATCTGCTTCTTTTGCAATTGAGGCCTAAAGTCTGTGGTAATATCTTATACTGGCGAACGGTTTAAATTTAATAAATATCTATTCTAAATTACCAATGTATGTAAGTACTTTTCTTTAATTAAGGAATGTGATCTGGTTCTCATATTCTAATTGTAGGTTGATGACATGGTATCTTTTGATTAGCCCTCCAACAATTTAAATTTCTATTGTTATAAAATCCCTATAAATTGGTTTGGTATGTTCTGATTTTATTCTGAGGTGACTTTTCTGCTTGAAATGTTATGCACAAATGTGTTAGGCTAACCAACATTCCTCTCCAACAAATGGCCACAAGTAAGAAAGGGCATGGGCTTGCTTTTAAGATTTAACAAATGTTTTGAAGTCTCTGGTAGTAGAAGTGTCAGTAGGTTGATGAGCAGCGGTTATAATCTTTAATAACTATCCTTGCGCACAACCTTTCTCTAGAGTGAATCAATTTTCACATGACTGGGGCCTTAAAAAATTGGATCTAGCAAGTAGGATAAATTATTTGACGTTAGACAGGAGGATTAAGGAACACAAACATCTTCAAATAAGTGTCCAATCCAAGCCAGCTTAGCCACTTGGTTGAGCTCTTGTAAGAGCTTTTGGAAATTGCATAAGATCATGATTCAATAGTATCACACACCCCGTGGTTGAGAGCTCATCAATATTGTTTCTAGCCCAATTAGAGTCCAAATAGGCATGGCATTAAATTTTACTAGCAGGAAAATACGGACTGTAGGATAAAGACTCTTCGATGTATTACAAAATCTCTTCACAGAAACCATACGAGTAAGGGTAGGATAGGGCATGTGTTGACAATTCTTAACAACTGTGGCAATAATATCTAGACGTGACAGGAGTAGAGTATTGAAATGGACCACCAATACTTACATTCTATGCATTTTAGATTCTTTTTAACTAAATGACTTGGGAGAACTAGTTGTAGAACCTTCAATATAAAAAGGAGTTTGACATGATTTGTCTCGGATATAACAAACAATGCAAGATGGTTAAGAGGAGTCATTCGACATATGGGAAAAAGATTTTGAACCCTGATAATAAAATGACTGTATACATGTGAGCGGTATAGCATTTATAACTTTTCGCCACAAACATATATAAACACAATCATGCTTTGAGTTTTTCTCTGCATGGCTACATTTATAGTATAACATTTTGTGTTGGTTCAAAATAAATTCAATCTTAAAAAAGTCTGCTCTAATAAACATTTGTTGAGTGGTTTTCTAACTTTTCAATTTATTAATCTGATTTACTTCTACATTCTCATTGTGGTGTGGGTTGATGACTTGATAAGGTCTGGTTAATCTATAGTCATCCAAGAACTTCAAATCTATTTGCCATAAACTTGTCAATTCATTTAACTTGTTGCTAGGCTTTAACTTAGGAATATTTTGCCTCTGCTAGGAAGAATTGGAAGCTCATTAATCCTGTCTTTTGAAATTCTGAACTGCGGCTGGCTTTGCTTCTATGAGAATGTCAAATCCCACTGCTTAATTGTAGACTATACTATAACATCTTTAATGATTTGCATCTTTGCAATTTTTAATTGAACCAGGACATAATTTCAGAATCTGTTCAAAGGTGTAACTTTTACATTCTTTTCAGCTCACTTTATTTATTCATTTATTAATTAATATGTCATATTCTTACGTCGTCTCCTTTCTTGGGCAATCGATTTCCATTATCATTCTGATGAAATCCTATTTCTGTCTTTTTTGGTATATCATCACTTGAGAAAAGGAGCATTTTTTTTTACCACTAAGAGATTTTTGCCCATATTTCATTTGGATAGCGTGGTAGGTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGACTCTACTATTAAATCTTCAAGGAGACGGCACTGGCTTGTGAATAAAAATTCAAGTGAAGATCATAACAAGCTTGACATTTGGAATTTTGACCGGGATCAGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCGTCTAGCCATTGGGATGATGAAACTGATATTGATGTGGTAAACACTGGAGAACCATCCAATCGTGATCAGTTGTATGACAAAAGGGGACCAGCAAGTGATAGTTTTGAAGGTATTGAAGCTTGTGAGAACCAATCTACTTCCAGAGATATAAACTTATTAGTCGAGAATGCACCAAGAGTGCTATCGATAACTCCAGAAGATGAATTGCACAATTTTAATGATTTACAAAAGAACATTGAGGATCCAGGTGCAGAACTTAATGCGAGCTTACCCTCCACTTCAACGGAGCTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGTAAAAGTTTTATTCAATTTCTATACATGGAGATTCAAGGATCCAATTAAACCTTATGGTATTCTTTTTGCTTCTTGAGCTAAAATTATTATAAAAGCCAGGACCTTCGGCAGCGACCTTTCAATTTATTCAGCATGAGAGTTAGCTTTTCTGACTTCATTAACTAGGTTGCATTTTTTCCTTCATGATTGGGACTAGTGAACAGCTTATTGGAATTTGCCATCGTATTCATAACCTTCTTAATGATAATGTCATATATTTTGTAGTAAAACTCTGGATTATGTTTCGAACATGCTATGGTTGTGTACTAGTCCTTTCTTCGATACATGCAGAAGTAAGGACTTCCAAACAAAAAACAAATAACATTGAGAAACACTATGCTGCCTCCATAATTTTTTTGTATTTTTCCCATTATCTCTCTGCTCTTTTTTTATCTATTTTTGTTTTCTAATTCGAAGGTAAAATTAACTATCTAATTCAACATGAAATGAAATGTGTTTTAGGGTTGGTAATATGTTGCAGAAGTTCAAGTTGAGGATTGTTTGAGCAGTGATGGGATTTGCATGAATGTTAAACACTGGATATTTTAACTGCTTGTCGTGTATGCTTGTATTGGGATTCTTGAACTGTTAGGCAGCATCAGTGATCTAATTAAGAAAAATTAACCTGAAAATTGTGGCTGCTCTATAGTCGTCTATACAATTTTATGCGAGCTCCAAATTTACTTATATTCCTCTAGTGCCTACTTCTACTTTGAAACTCTGAGACTATTAATGATGTTTGTTCTTTGAATTTGTAGAATGAGTTCTGTCATTCTCATTCGATGGATTTACTTATCATCTAACTGCTGTCAATGTTCTAGTATGTACTATAAAGTTCAGTATTAGTTTCTAATTTATTGGTCTGGTATCTTGTAGGCTTTGAGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGATCATCCCTATTGGATATTTACATCCTTCCTGATGAAAGAACTCTTAACAACATTGTTCAGGTCACATATTCTTTTTTATGCTCAGCGTCCTTCATGGTTTTTACTTCATAATACTCATTATGGTGACATGTTTATTTATTACGGTGAAAATGGCCCATCTGGACAAACAACTAATTCTCAATAGTTATTAATAACAGCCCTCTATGGCACCTGTTTGTAGTGCATGCCGATGTCGGGAACCAGAGGACCTCCTCATAAGCTGCCATCTTTGTCAGATTCGACATATTCATTCATATTGTCTGGACCCTCCCTTGTTACCATGGACTTGTATTCACTGTAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTTTTCTTGATATCAGGTAACTTGGCTCCACTTCTGATTCTGTCATATTGTTCTGTATACTTTTCAAAATTCATCTGAGTTGGGTATTGATGGATTTTTCCGTTGGAAGTTGGATTAAAGGGTAGCATTGTTGTGAGCACAAACAAATAGCGAGCTACTTGTCTTGAGCGATAATTTTTATGTCAGACGATCCGGTTTTTCACCTTGTTAGCCATTTTTTCTTTAAAAAACTTTCTGTTAGCTTCTGAAACGTTGTTTTTGATTTCTTGAACTTTTTTTTTTACTTACTTTTTGGCCTTTGCCATGTTGCTTTCTTACTTACTCTAATTTCATAGTTGGTTGTTCTCATACCATATTTCTTAAAAGTAAATGAGAAATTGTGCCCACACTATATATCCTACCTTTTCTATGATGTGATTCATTTGAATATATTTTATTTTCATTGTATTTTTGGTCCCGACGGGGCGGTCCCGTTGCCTAAGGCACACAGTTTCTTGGTAATATCTACTTAGAAGCCACATGTTTGAACCTTTGAGTGACCTTAATAAGAAAAAATCTTTGATTTCTCCAAATTTGGACCTTGGGACAGGCGAAAGGTTCTCTAGGATTAGTGGAGATGGGTCCAATAAATAAGGGTATAAAAAACCTTTTTTTTTTTTTTGGGATAGACGAATAGGACATACTAATATTTTGACAAACTTACCGTTGCATATGTCAGCTTTATCTTATTTTTTCTATTTGTTTTAAAATAAATAATCATCTACATCAGTACTTTTGTGTTGGGTTCACATGTGAAACGAAAAGAAAGTTTCTAACTAAAATTGAGTTTTTCAAAGCCGAGTCTAAAATAGAAAGTAGATGAATAGAGTTTTTAAAAGAATTAAATAAAATAAGAAACATATAAAATCATGTTTAAACCTACTAGTGTTATTAGGACAGTATTCACAGGTGCATTGAGTTGAATTGCATGTGCGCAAACATACTGCTACCATTCTGCTTGTATTAGACGCTAAGAACATGGGATGGGAATTATGAAATAATCCACCGAACTGCAGAATACCCCATTAGGAAGATAGTTTATAAAATCCTTTGTTGAAGCTTTACAATGATTGATAGTGATTTTGTTTTAGGTGATTCCAAAGAGCAATTGAAGTTAGCTGAAGATTTTGAAGCAAAGAAAAGCCAATCTGCCTCCCACAAATCCTTCACTGCTAAGGTTGTGCCCAACACTGATAATTCCATACGTACATCTTTTGGAAATTCTTATGTGCATAAAGCATAATTATTAGTATATTGAAATCATGGACACTCCTTTTTCTAGCTGTTCATGTGAAA
mRNA sequence
AAAAAAATCCAAAACTCAAATCGGTTGCCTTCGTCCCCGACACAAATTACAAATTTATTTATATTTTTTCGCGGCAATTTCTGGAGGGTTCGATGGAGGAGGAGGAGGAGCAAGACCATGGCCTCGCTAATGGAGTTCTTTCCTGCCCTAATCGACTTCCCGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAGAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTAATTTTATTAGTCCCCAATTCAGTCTGAAAAGCACCAATAATTTTCAAATAAGATGGATTTGTTGGGAATTACAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCCAACATGGAGGGCATGTCCCAGAAGGTCCTTACATTCTTCAAAGGTATAAATCAATTGTTACTTTTGCTACATTACATTATAGTTGCTTGCATACACCATCTAGGCAAGCAAATTTCCAATTATCCCAGAGAAGTGCTGCTCCTTTATTCAATGCATATGTTCCGAGTCTTCTGACTGGCCAATCGGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGAGCTCTGTCTCAACCAAAAAGTATAATTTGCTTTCTGAAAAATTACATAATTATGGAAATGTTGAAGATCAAAGCACTGAAGACATATGCATTTTTGCTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGATCTGTACTCTGATTATAGAAAAAGTGATGGCACCACCCATAAACCAAAGCACAAATTGTGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCGAGTAGCAGAAACCATTTTGAGGAACCAACTCCCTCTGGTTTTTTTGGGACTGAGGCTAACCAACATTCCTCTCCAACAAATGGCCACAAAGTGAATCAATTTTCACATGACTGGGGCCTTAAAAAATTGGATCTAGCAAAAACCATACGAGTAAGGCGTGGTAGGTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGACTCTACTATTAAATCTTCAAGGAGACGGCACTGGCTTGTGAATAAAAATTCAAGTGAAGATCATAACAAGCTTGACATTTGGAATTTTGACCGGGATCAGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCGTCTAGCCATTGGGATGATGAAACTGATATTGATGTGGTAAACACTGGAGAACCATCCAATCGTGATCAGTTGTATGACAAAAGGGGACCAGCAAGTGATAGTTTTGAAGGTATTGAAGCTTGTGAGAACCAATCTACTTCCAGAGATATAAACTTATTAGTCGAGAATGCACCAAGAGTGCTATCGATAACTCCAGAAGATGAATTGCACAATTTTAATGATTTACAAAAGAACATTGAGGATCCAGGTGCAGAACTTAATGCGAGCTTACCCTCCACTTCAACGGAGCTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGCCAGGACCTTCGGCAGCGACCTTTCAATTTATTCAGCATGAGATAAAACTCTGGATTATGTTTCGAACATGCTATGGTTGTGTACTAGTCCTTTCTTCGATACATGCAGAAGCTTTGAGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGATCATCCCTATTGGATATTTACATCCTTCCTGATGAAAGAACTCTTAACAACATTGTTCAGCCCTCTATGGCACCTGTTTGTAGTGCATGCCGATGTCGGGAACCAGAGGACCTCCTCATAAGCTGCCATCTTTGTCAGATTCGACATATTCATTCATATTGTCTGGACCCTCCCTTGTTACCATGGACTTGTATTCACTGTAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTTTTCTTGATATCAGGTGATTCCAAAGAGCAATTGAAGTTAGCTGAAGATTTTGAAGCAAAGAAAAGCCAATCTGCCTCCCACAAATCCTTCACTGCTAAGGTTGTGCCCAACACTGATAATTCCATACGTACATCTTTTGGAAATTCTTATGTGCATAAAGCATAATTATTAGTATATTGAAATCATGGACACTCCTTTTTCTAGCTGTTCATGTGAAA
Coding sequence (CDS)
ATGGAGGAGGAGGAGGAGCAAGACCATGGCCTCGCTAATGGAGTTCTTTCCTGCCCTAATCGACTTCCCGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAGAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTAATTTTATTAGTCCCCAATTCAGTCTGAAAAGCACCAATAATTTTCAAATAAGATGGATTTGTTGGGAATTACAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCCAACATGGAGGGCATGTCCCAGAAGGTCCTTACATTCTTCAAAGGTATAAATCAATTGTTACTTTTGCTACATTACATTATAGTTGCTTGCATACACCATCTAGGCAAGCAAATTTCCAATTATCCCAGAGAAGTGCTGCTCCTTTATTCAATGCATATGTTCCGAGTCTTCTGACTGGCCAATCGGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGAGCTCTGTCTCAACCAAAAAGTATAATTTGCTTTCTGAAAAATTACATAATTATGGAAATGTTGAAGATCAAAGCACTGAAGACATATGCATTTTTGCTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGATCTGTACTCTGATTATAGAAAAAGTGATGGCACCACCCATAAACCAAAGCACAAATTGTGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCGAGTAGCAGAAACCATTTTGAGGAACCAACTCCCTCTGGTTTTTTTGGGACTGAGGCTAACCAACATTCCTCTCCAACAAATGGCCACAAAGTGAATCAATTTTCACATGACTGGGGCCTTAAAAAATTGGATCTAGCAAAAACCATACGAGTAAGGCGTGGTAGGTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGACTCTACTATTAAATCTTCAAGGAGACGGCACTGGCTTGTGAATAAAAATTCAAGTGAAGATCATAACAAGCTTGACATTTGGAATTTTGACCGGGATCAGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCGTCTAGCCATTGGGATGATGAAACTGATATTGATGTGGTAAACACTGGAGAACCATCCAATCGTGATCAGTTGTATGACAAAAGGGGACCAGCAAGTGATAGTTTTGAAGGTATTGAAGCTTGTGAGAACCAATCTACTTCCAGAGATATAAACTTATTAGTCGAGAATGCACCAAGAGTGCTATCGATAACTCCAGAAGATGAATTGCACAATTTTAATGATTTACAAAAGAACATTGAGGATCCAGGTGCAGAACTTAATGCGAGCTTACCCTCCACTTCAACGGAGCTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGCCAGGACCTTCGGCAGCGACCTTTCAATTTATTCAGCATGAGATAAAACTCTGGATTATGTTTCGAACATGCTATGGTTGTGTACTAGTCCTTTCTTCGATACATGCAGAAGCTTTGAGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGATCATCCCTATTGGATATTTACATCCTTCCTGATGAAAGAACTCTTAACAACATTGTTCAGCCCTCTATGGCACCTGTTTGTAGTGCATGCCGATGTCGGGAACCAGAGGACCTCCTCATAAGCTGCCATCTTTGTCAGATTCGACATATTCATTCATATTGTCTGGACCCTCCCTTGTTACCATGGACTTGTATTCACTGTAAGGATCTGCAGACACTCTACCATCGAAGCCATTAA
Protein sequence
MEEEEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHGGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSAGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLYSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHKVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSSEDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQTLYHRSH
Homology
BLAST of ClCG05G011930 vs. NCBI nr
Match:
XP_038887153.1 (uncharacterized protein LOC120077302 [Benincasa hispida])
HSP 1 Score: 889.4 bits (2297), Expect = 1.9e-254
Identity = 470/675 (69.63%), Postives = 493/675 (73.04%), Query Frame = 0
Query: 4 EEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM 63
EEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM
Sbjct: 2 EEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM 61
Query: 64 SRSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQ 123
SRSITHL ICWELQGRKFNLAKKFRTIIVNHRWLEDCI+
Sbjct: 62 SRSITHL----------------------ICWELQGRKFNLAKKFRTIIVNHRWLEDCIK 121
Query: 124 HGGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQ 183
HG VPEGPY+LQ +GQ
Sbjct: 122 HGKRVPEGPYVLQ--------------------------------------------SGQ 181
Query: 184 SAGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKD 243
AGPLSMKLPLA+K SVSTKK NLL EKLHNYGNV+DQS +DIC F DSILPHSSLLDKD
Sbjct: 182 LAGPLSMKLPLAEKGSVSTKKNNLLCEKLHNYGNVDDQSIKDICSFDDSILPHSSLLDKD 241
Query: 244 LYSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNG 303
LYSD+R SD T HK K L +RISKQED SSSSSRNHFEEPTPSGFF E
Sbjct: 242 LYSDFRNSDVTAHKAKDILRRRISKQEDSSSSSSRNHFEEPTPSGFFAIE---------- 301
Query: 304 HKVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKN 363
RG SS LARDERKGESSNQDST+ SSRR LVNKN
Sbjct: 302 ------------------------RGSSSRLARDERKGESSNQDSTVNSSRRCRRLVNKN 361
Query: 364 SSEDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPA 423
S+EDHNK DIWNFD + HLGTRNSLT PSSHWDDET+I+VVN G S+RDQL+D+RG +
Sbjct: 362 STEDHNKADIWNFDLRRNHLGTRNSLTGPSSHWDDETNIEVVNIGGTSDRDQLWDERGLS 421
Query: 424 SDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLP 483
SDSFEGIEACE+QSTSRD NL VENAPR SIT EDELHN N+LQKNIEDP ELNASLP
Sbjct: 422 SDSFEGIEACEDQSTSRDTNLQVENAPRGSSITSEDELHNINNLQKNIEDPVIELNASLP 481
Query: 484 STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIM 543
STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 482 STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM-------------------- 539
Query: 544 FRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSL 603
ALSRKISTCPLCKA+FLSITKVEDAATSDQKIYSQTIPCG SL
Sbjct: 542 -----------------ALSRKISTCPLCKATFLSITKVEDAATSDQKIYSQTIPCGPSL 539
Query: 604 LDIYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWT 663
LDIYILPDERTLNN+VQPS+A VCSACRCREPEDLL+SCHLCQIRHIHSYCLDPPLLPWT
Sbjct: 602 LDIYILPDERTLNNVVQPSVAAVCSACRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWT 539
Query: 664 CIHCKDLQTLYHRSH 679
CIHCKDLQ LYHRSH
Sbjct: 662 CIHCKDLQILYHRSH 539
BLAST of ClCG05G011930 vs. NCBI nr
Match:
XP_011651366.1 (uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharacterized protein LOC101213123 [Cucumis sativus] >XP_031739474.1 uncharacterized protein LOC101213123 [Cucumis sativus] >KGN57738.1 hypothetical protein Csa_011190 [Cucumis sativus])
HSP 1 Score: 862.1 bits (2226), Expect = 3.3e-246
Identity = 459/677 (67.80%), Postives = 485/677 (71.64%), Query Frame = 0
Query: 2 EEEEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG 61
EEE E+DHGLAN +LSCPNR+PGCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG
Sbjct: 3 EEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVG 62
Query: 62 AMSRSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDC 121
AMSRSITHL ICWELQGRKF+LA+KFRTIIVNHRWLEDC
Sbjct: 63 AMSRSITHL----------------------ICWELQGRKFDLAEKFRTIIVNHRWLEDC 122
Query: 122 IQHGGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLT 181
I+HG VPEGPYILQ +
Sbjct: 123 IKHGKRVPEGPYILQ--------------------------------------------S 182
Query: 182 GQSAGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLD 241
GQS GPLSMKLPLADK VS KKYNLLSEKLHNYGNVEDQS +DIC F DSILP SSLLD
Sbjct: 183 GQSIGPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLD 242
Query: 242 KDLYSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPT 301
KDL SD+RKSD T HK KHK+ KRISK EDPSSSSSRN FEEPT +G F E
Sbjct: 243 KDLSSDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIEC------- 302
Query: 302 NGHKVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVN 361
G SSLARDERKGESSNQDST+KSSRRR LV+
Sbjct: 303 ---------------------------GSPSSLARDERKGESSNQDSTVKSSRRRRLLVS 362
Query: 362 KNSSEDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRG 421
NS EDHNK DI NFD + Y LGTRNSLTVPS WD ETDI+VVN G S+R+QL D+RG
Sbjct: 363 NNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVVNIGGTSDREQLCDERG 422
Query: 422 PASDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNAS 481
AS FEG+EACENQSTS+D NLLV+NAPRVLSIT EDELHN NDLQKNIEDP EL+AS
Sbjct: 423 LASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDAS 482
Query: 482 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLW 541
LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM------------------ 542
Query: 542 IMFRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGS 601
ALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCGS
Sbjct: 543 -------------------ALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGS 542
Query: 602 SLLDIYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLP 661
SLLDIY+L DERTLNN+VQPS+A VCSACRCREPEDLL+SCHLCQIR IHSYCLDPPLLP
Sbjct: 603 SLLDIYLLSDERTLNNVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLP 542
Query: 662 WTCIHCKDLQTLYHRSH 679
WTCIHCKDLQTLYHRSH
Sbjct: 663 WTCIHCKDLQTLYHRSH 542
BLAST of ClCG05G011930 vs. NCBI nr
Match:
XP_022983591.1 (E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima])
HSP 1 Score: 811.2 bits (2094), Expect = 6.6e-231
Identity = 430/673 (63.89%), Postives = 470/673 (69.84%), Query Frame = 0
Query: 6 EQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSR 65
EQD+GLAN V+ CPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3 EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
Query: 66 SITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHG 125
SITHL ICWEL+GRKFNLAKKF+TIIVNHRWLEDCI+ G
Sbjct: 63 SITHL----------------------ICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQG 122
Query: 126 GHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSA 185
VPE PYILQ +GQSA
Sbjct: 123 MRVPEDPYILQ--------------------------------------------SGQSA 182
Query: 186 GPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLY 245
GPLSMKLP +DK SVSTKKY + SEKLHN GNVEDQ + +C F DSILPHSSLLDK++Y
Sbjct: 183 GPLSMKLPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMY 242
Query: 246 SDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHK 305
D+R SD T HK KHKL KRISK E+PSSSSS+NHF+EPTPS FF
Sbjct: 243 PDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFA-------------- 302
Query: 306 VNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSS 365
+ G SSSLARDE KG+ N++ST++SSRR LV KNSS
Sbjct: 303 --------------------IGCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 362
Query: 366 EDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASD 425
EDHN D+WNFD +QYHL TRNSLTV SSH DDETD +VVN G ++RDQL D+RG ASD
Sbjct: 363 EDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVVNVGGTADRDQLCDERGLASD 422
Query: 426 SFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPST 485
SFEG+EACENQSTSR NLLVENAPR+L++T EDELH DLQK IEDP ELN S+PST
Sbjct: 423 SFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--KDLQKIIEDPVIELNESIPST 482
Query: 486 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFR 545
+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 TTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM---------------------- 536
Query: 546 TCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLD 605
A SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLD
Sbjct: 543 ---------------ASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLD 536
Query: 606 IYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCI 665
IYILPDERTL+++VQPS+A VCS CRC+EPEDLL+SCHLCQIRHIHSYCLDPPLLPW CI
Sbjct: 603 IYILPDERTLDSVVQPSVAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICI 536
Query: 666 HCKDLQTLYHRSH 679
HCKDLQTLYHR H
Sbjct: 663 HCKDLQTLYHRRH 536
BLAST of ClCG05G011930 vs. NCBI nr
Match:
XP_022935568.1 (uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 uncharacterized protein LOC111442404 [Cucurbita moschata])
HSP 1 Score: 805.8 bits (2080), Expect = 2.8e-229
Identity = 427/673 (63.45%), Postives = 468/673 (69.54%), Query Frame = 0
Query: 6 EQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSR 65
EQD+GLANGV+ CPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3 EQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
Query: 66 SITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHG 125
SITHL ICWEL+GRKFNLAKKF+TIIVNHRWLEDCI+HG
Sbjct: 63 SITHL----------------------ICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHG 122
Query: 126 GHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSA 185
VPE PYILQ +GQSA
Sbjct: 123 KRVPEDPYILQ--------------------------------------------SGQSA 182
Query: 186 GPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLY 245
GPLSMKLP +D+ SVSTKKY + SEKLHN GN+EDQ + +C F DSILPHSSLLDK++Y
Sbjct: 183 GPLSMKLPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMY 242
Query: 246 SDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHK 305
D+R SD T HK KHKL KRISK E+PSSSSS+NHF+EPTPS FF
Sbjct: 243 PDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFA-------------- 302
Query: 306 VNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSS 365
+ G SSSLARDE KG+ N++ST++SSRR LV KNSS
Sbjct: 303 --------------------IGCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 362
Query: 366 EDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASD 425
EDHN+ D+WNFD +QYHL RNS TV SSH DDETDI+ VN G ++ DQL D+RG ASD
Sbjct: 363 EDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGLASD 422
Query: 426 SFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPST 485
SFEG+EAC NQSTSR NLLVENAPR+L+ T EDELH N LQKNIED ELN S+PST
Sbjct: 423 SFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--NGLQKNIEDSVIELNTSIPST 482
Query: 486 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFR 545
STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM---------------------- 536
Query: 546 TCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLD 605
A RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SLLD
Sbjct: 543 ---------------ASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLD 536
Query: 606 IYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCI 665
IYILPDERTL+++VQPS+A VCS CRCREPEDLL+SCHLCQIRHIHSYCLDPPLLPW CI
Sbjct: 603 IYILPDERTLDSVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICI 536
Query: 666 HCKDLQTLYHRSH 679
HCKDLQTLYHR H
Sbjct: 663 HCKDLQTLYHRRH 536
BLAST of ClCG05G011930 vs. NCBI nr
Match:
KAG6581172.1 (BRCT domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 805.4 bits (2079), Expect = 3.6e-229
Identity = 427/673 (63.45%), Postives = 469/673 (69.69%), Query Frame = 0
Query: 6 EQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSR 65
EQD+ LANGV+ CPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3 EQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
Query: 66 SITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHG 125
SITHL ICWEL+GRKFNLAKKF+TIIVNHRWLEDCI+HG
Sbjct: 63 SITHL----------------------ICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHG 122
Query: 126 GHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSA 185
VPE PYILQ +GQSA
Sbjct: 123 KRVPEDPYILQ--------------------------------------------SGQSA 182
Query: 186 GPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLY 245
GPLSMKLP +D+ SVSTKKY + SEKLHN GN+EDQ + +C F DSILPHSSLLDK++Y
Sbjct: 183 GPLSMKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMY 242
Query: 246 SDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHK 305
D+R SD T HK KHKL KRISK E+PSSSSS+NHF+EPTPS FF +
Sbjct: 243 PDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVD---------- 302
Query: 306 VNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSS 365
D+ G SSSLARDE KG+ N++ST++SSRR LV KNSS
Sbjct: 303 -------------DMC-------GSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 362
Query: 366 EDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASD 425
EDHN+ D+WNFD +QYHL RNS TV SSH DDETDI+ VN G ++ DQL D+RGPASD
Sbjct: 363 EDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGPASD 422
Query: 426 SFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPST 485
SFEG+EAC NQSTSR NLLVENAPR+L+ T EDELH N LQKNIED ELN S+PST
Sbjct: 423 SFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--NGLQKNIEDSVIELNTSIPST 482
Query: 486 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFR 545
STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM---------------------- 540
Query: 546 TCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLD 605
A RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SL D
Sbjct: 543 ---------------ASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLFD 540
Query: 606 IYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCI 665
IYILPDERTL+++VQPS+A VCS CRCREPEDLL+SCHLCQIRHIHSYCLDPPLLPW CI
Sbjct: 603 IYILPDERTLDSVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICI 540
Query: 666 HCKDLQTLYHRSH 679
HCKDLQTLYHR H
Sbjct: 663 HCKDLQTLYHRRH 540
BLAST of ClCG05G011930 vs. ExPASy Swiss-Prot
Match:
O04251 (BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3)
HSP 1 Score: 70.1 bits (170), Expect = 1.1e-10
Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 0
Query: 12 ANGVLSCPNR-LPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM-SRSITH 71
AN +L P R L G P G +++V ++GY G +R ++++M+ G + + + +TH
Sbjct: 92 ANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTH 151
Query: 72 LVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTI-IVNHRWLEDCIQHGGHV 131
L IC++ +G K+ LAK+ + I +VNHRWLEDC+++ +
Sbjct: 152 L----------------------ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLL 211
Query: 132 PEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSAGPL 191
PE Y + Y+ + A+ S + A+ + + S L VP++ + + P
Sbjct: 212 PEVDYEISGYELDIMEASARDS--EDEAEDASVKPANTSPLGLRVGAVPAV---EISKPG 266
Query: 192 SMKLPLADKSSV-STKKYNLLSEK 212
PL + SS+ +T K N L+ K
Sbjct: 272 GKDFPLEEGSSLCNTSKDNWLTPK 266
BLAST of ClCG05G011930 vs. ExPASy TrEMBL
Match:
A0A0A0L7F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1)
HSP 1 Score: 862.1 bits (2226), Expect = 1.6e-246
Identity = 459/677 (67.80%), Postives = 485/677 (71.64%), Query Frame = 0
Query: 2 EEEEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG 61
EEE E+DHGLAN +LSCPNR+PGCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG
Sbjct: 3 EEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVG 62
Query: 62 AMSRSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDC 121
AMSRSITHL ICWELQGRKF+LA+KFRTIIVNHRWLEDC
Sbjct: 63 AMSRSITHL----------------------ICWELQGRKFDLAEKFRTIIVNHRWLEDC 122
Query: 122 IQHGGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLT 181
I+HG VPEGPYILQ +
Sbjct: 123 IKHGKRVPEGPYILQ--------------------------------------------S 182
Query: 182 GQSAGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLD 241
GQS GPLSMKLPLADK VS KKYNLLSEKLHNYGNVEDQS +DIC F DSILP SSLLD
Sbjct: 183 GQSIGPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLD 242
Query: 242 KDLYSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPT 301
KDL SD+RKSD T HK KHK+ KRISK EDPSSSSSRN FEEPT +G F E
Sbjct: 243 KDLSSDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIEC------- 302
Query: 302 NGHKVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVN 361
G SSLARDERKGESSNQDST+KSSRRR LV+
Sbjct: 303 ---------------------------GSPSSLARDERKGESSNQDSTVKSSRRRRLLVS 362
Query: 362 KNSSEDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRG 421
NS EDHNK DI NFD + Y LGTRNSLTVPS WD ETDI+VVN G S+R+QL D+RG
Sbjct: 363 NNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVVNIGGTSDREQLCDERG 422
Query: 422 PASDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNAS 481
AS FEG+EACENQSTS+D NLLV+NAPRVLSIT EDELHN NDLQKNIEDP EL+AS
Sbjct: 423 LASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDAS 482
Query: 482 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLW 541
LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM------------------ 542
Query: 542 IMFRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGS 601
ALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCGS
Sbjct: 543 -------------------ALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGS 542
Query: 602 SLLDIYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLP 661
SLLDIY+L DERTLNN+VQPS+A VCSACRCREPEDLL+SCHLCQIR IHSYCLDPPLLP
Sbjct: 603 SLLDIYLLSDERTLNNVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLP 542
Query: 662 WTCIHCKDLQTLYHRSH 679
WTCIHCKDLQTLYHRSH
Sbjct: 663 WTCIHCKDLQTLYHRSH 542
BLAST of ClCG05G011930 vs. ExPASy TrEMBL
Match:
A0A6J1J2R6 (E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482151 PE=4 SV=1)
HSP 1 Score: 811.2 bits (2094), Expect = 3.2e-231
Identity = 430/673 (63.89%), Postives = 470/673 (69.84%), Query Frame = 0
Query: 6 EQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSR 65
EQD+GLAN V+ CPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3 EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
Query: 66 SITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHG 125
SITHL ICWEL+GRKFNLAKKF+TIIVNHRWLEDCI+ G
Sbjct: 63 SITHL----------------------ICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQG 122
Query: 126 GHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSA 185
VPE PYILQ +GQSA
Sbjct: 123 MRVPEDPYILQ--------------------------------------------SGQSA 182
Query: 186 GPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLY 245
GPLSMKLP +DK SVSTKKY + SEKLHN GNVEDQ + +C F DSILPHSSLLDK++Y
Sbjct: 183 GPLSMKLPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMY 242
Query: 246 SDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHK 305
D+R SD T HK KHKL KRISK E+PSSSSS+NHF+EPTPS FF
Sbjct: 243 PDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFA-------------- 302
Query: 306 VNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSS 365
+ G SSSLARDE KG+ N++ST++SSRR LV KNSS
Sbjct: 303 --------------------IGCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 362
Query: 366 EDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASD 425
EDHN D+WNFD +QYHL TRNSLTV SSH DDETD +VVN G ++RDQL D+RG ASD
Sbjct: 363 EDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVVNVGGTADRDQLCDERGLASD 422
Query: 426 SFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPST 485
SFEG+EACENQSTSR NLLVENAPR+L++T EDELH DLQK IEDP ELN S+PST
Sbjct: 423 SFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--KDLQKIIEDPVIELNESIPST 482
Query: 486 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFR 545
+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 TTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM---------------------- 536
Query: 546 TCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLD 605
A SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLD
Sbjct: 543 ---------------ASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLD 536
Query: 606 IYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCI 665
IYILPDERTL+++VQPS+A VCS CRC+EPEDLL+SCHLCQIRHIHSYCLDPPLLPW CI
Sbjct: 603 IYILPDERTLDSVVQPSVAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICI 536
Query: 666 HCKDLQTLYHRSH 679
HCKDLQTLYHR H
Sbjct: 663 HCKDLQTLYHRRH 536
BLAST of ClCG05G011930 vs. ExPASy TrEMBL
Match:
A0A6J1FAW6 (uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC111442404 PE=4 SV=1)
HSP 1 Score: 805.8 bits (2080), Expect = 1.4e-229
Identity = 427/673 (63.45%), Postives = 468/673 (69.54%), Query Frame = 0
Query: 6 EQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSR 65
EQD+GLANGV+ CPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3 EQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
Query: 66 SITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHG 125
SITHL ICWEL+GRKFNLAKKF+TIIVNHRWLEDCI+HG
Sbjct: 63 SITHL----------------------ICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHG 122
Query: 126 GHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSA 185
VPE PYILQ +GQSA
Sbjct: 123 KRVPEDPYILQ--------------------------------------------SGQSA 182
Query: 186 GPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDLY 245
GPLSMKLP +D+ SVSTKKY + SEKLHN GN+EDQ + +C F DSILPHSSLLDK++Y
Sbjct: 183 GPLSMKLPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMY 242
Query: 246 SDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHK 305
D+R SD T HK KHKL KRISK E+PSSSSS+NHF+EPTPS FF
Sbjct: 243 PDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFA-------------- 302
Query: 306 VNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSS 365
+ G SSSLARDE KG+ N++ST++SSRR LV KNSS
Sbjct: 303 --------------------IGCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 362
Query: 366 EDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASD 425
EDHN+ D+WNFD +QYHL RNS TV SSH DDETDI+ VN G ++ DQL D+RG ASD
Sbjct: 363 EDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGLASD 422
Query: 426 SFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPST 485
SFEG+EAC NQSTSR NLLVENAPR+L+ T EDELH N LQKNIED ELN S+PST
Sbjct: 423 SFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--NGLQKNIEDSVIELNTSIPST 482
Query: 486 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFR 545
STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM---------------------- 536
Query: 546 TCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLD 605
A RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SLLD
Sbjct: 543 ---------------ASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLD 536
Query: 606 IYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCI 665
IYILPDERTL+++VQPS+A VCS CRCREPEDLL+SCHLCQIRHIHSYCLDPPLLPW CI
Sbjct: 603 IYILPDERTLDSVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICI 536
Query: 666 HCKDLQTLYHRSH 679
HCKDLQTLYHR H
Sbjct: 663 HCKDLQTLYHRRH 536
BLAST of ClCG05G011930 vs. ExPASy TrEMBL
Match:
A0A6J1D4V1 (uncharacterized protein LOC111016967 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016967 PE=4 SV=1)
HSP 1 Score: 743.8 bits (1919), Expect = 6.3e-211
Identity = 412/677 (60.86%), Postives = 456/677 (67.36%), Query Frame = 0
Query: 5 EEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMS 64
EEQ LA G LSCPNR GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMS
Sbjct: 2 EEQHQNLAYGALSCPNRHYGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMS 61
Query: 65 RSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQH 124
RSITHL ICW+L+GRKF+LAKKF+TIIVNHRWLEDCI+
Sbjct: 62 RSITHL----------------------ICWKLEGRKFSLAKKFKTIIVNHRWLEDCIRQ 121
Query: 125 GGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQS 184
G VPEGPYILQ +GQS
Sbjct: 122 GKRVPEGPYILQ--------------------------------------------SGQS 181
Query: 185 AGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLDKDL 244
AGPLS++LPLA K SVST KYN+LSEK N GNVE+QS + I F +I P S LLDKDL
Sbjct: 182 AGPLSIELPLAAKDSVSTTKYNVLSEKSQNCGNVEEQSIKSIYSFG-AIWPRSCLLDKDL 241
Query: 245 YSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGH 304
+SD+ KSD T+HK KHKL K+ISKQEDPS+SSSRN+F+EPTPS F
Sbjct: 242 FSDFGKSDDTSHKSKHKLRKKISKQEDPSNSSSRNNFQEPTPSEF--------------- 301
Query: 305 KVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNS 364
+ + RG SSSLARDERKGE+SN T+KSSRRR L+N+N+
Sbjct: 302 -------------------LEIERGSSSSLARDERKGENSNLSPTVKSSRRRR-LLNRNT 361
Query: 365 SEDHNKLDIWNFDRDQYHLGTR---NSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRG 424
SEDH K D+W+FD + YHLGTR N+ TV S H ++E DI+VV G S+ L D+ G
Sbjct: 362 SEDHCKPDVWDFDPECYHLGTRNHGNNFTVLSCHLNNERDIEVVGIGGSSDHGLLCDEGG 421
Query: 425 PASDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNAS 484
SDSFEG+EA ENQ TS+D NL VENAP VL I+ EDEL N + LQK IEDP E NAS
Sbjct: 422 IVSDSFEGVEARENQFTSKDANLPVENAPGVLMISSEDELSNIDTLQKEIEDPAVEHNAS 481
Query: 485 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLW 544
LP TS ELSCVICWTDFSS RGVLPCGHRFCYSCIQNWADHM
Sbjct: 482 LP-TSAELSCVICWTDFSSMRGVLPCGHRFCYSCIQNWADHM------------------ 538
Query: 545 IMFRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGS 604
A SRKISTCPLCKASFLSITKVE+AATSDQKIYSQTIPCG
Sbjct: 542 -------------------ASSRKISTCPLCKASFLSITKVEEAATSDQKIYSQTIPCGP 538
Query: 605 SLLDIYILPDERTLNNIVQPSMAPVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLP 664
SLLDI+ILPDERTLN+ VQ S+ VCSACRCREPEDLL+SCHLCQIRHIHSYCLDPPLLP
Sbjct: 602 SLLDIFILPDERTLNSGVQASVGGVCSACRCREPEDLLMSCHLCQIRHIHSYCLDPPLLP 538
Query: 665 WTCIHCKDLQTLYHRSH 679
WTCIHCKDLQTLYHRSH
Sbjct: 662 WTCIHCKDLQTLYHRSH 538
BLAST of ClCG05G011930 vs. ExPASy TrEMBL
Match:
A0A5D3DV52 (BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold86G00240 PE=4 SV=1)
HSP 1 Score: 737.6 bits (1903), Expect = 4.5e-209
Identity = 402/619 (64.94%), Postives = 430/619 (69.47%), Query Frame = 0
Query: 2 EEEEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVG 61
EEE E+DHG AN +LSCPNR+PGCPIEGMESVV TVSGY GTERFNLIKMISYTGASYVG
Sbjct: 3 EEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASYVG 62
Query: 62 AMSRSITHLVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTIIVNHRWLEDC 121
AMSRSITHL ICWELQGRKF+LAKKFRTIIVNH WLEDC
Sbjct: 63 AMSRSITHL----------------------ICWELQGRKFDLAKKFRTIIVNHHWLEDC 122
Query: 122 IQHGGHVPEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLT 181
I+HG VPEGPYILQ +
Sbjct: 123 IKHGKRVPEGPYILQ--------------------------------------------S 182
Query: 182 GQSAGPLSMKLPLADKSSVSTKKYNLLSEKLHNYGNVEDQSTEDICIFADSILPHSSLLD 241
GQS GPLSMKLPLADK SVS KKYNLLSEKLHNYGNVEDQS DIC +DSILP SLLD
Sbjct: 183 GQSVGPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLD 242
Query: 242 KDLYSDYRKSDGTTHKPKHKLWKRISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPT 301
KDL SD+RKSD T +KPK+K+ KRISKQEDPS SSSRN FEEPT SGF
Sbjct: 243 KDLSSDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGF------------ 302
Query: 302 NGHKVNQFSHDWGLKKLDLAKTIRVRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVN 361
+ ++RG SSSLARD+RKGESSNQDST+KSSRRRH LV+
Sbjct: 303 ----------------------LAIKRGSSSSLARDKRKGESSNQDSTVKSSRRRHLLVS 362
Query: 362 KNSSEDHNKLDIWNFDRDQYHLGTRNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRG 421
NSSEDHNK DIWNFD ++YHLGT NSL VPSSHW ETD++VVN G S+ ++L D+RG
Sbjct: 363 NNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAETDMEVVNIGGTSDCERLCDERG 422
Query: 422 PASDSFEGIEACENQSTSRDINLLVENAPRVLSITPEDELHNFNDLQKNIEDPGAELNAS 481
AS FEGIEA ENQSTS D NLLV+NAPRVL ITPEDELHN NDLQKNIEDP ELNAS
Sbjct: 423 LASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPEDELHNMNDLQKNIEDPVIELNAS 482
Query: 482 LPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLW 541
LP TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 483 LPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM------------------ 484
Query: 542 IMFRTCYGCVLVLSSIHAEALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGS 601
ALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG
Sbjct: 543 -------------------ALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGP 484
Query: 602 SLLDIYILPDERTLNNIVQ 621
SLLDIY+L DERTLNN+VQ
Sbjct: 603 SLLDIYLLSDERTLNNVVQ 484
BLAST of ClCG05G011930 vs. TAIR 10
Match:
AT1G67180.1 (zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein )
HSP 1 Score: 284.6 bits (727), Expect = 2.0e-76
Identity = 202/653 (30.93%), Postives = 294/653 (45.02%), Query Frame = 0
Query: 30 MESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLVGFNFISPQFSLKSTNNFQ 89
ME+VVATVSGYHG++RF LIK+IS++GASYVGAMSRSITHLV
Sbjct: 1 MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLV------------------ 60
Query: 90 IRWICWELQGRKFNLAKKFRTIIVNHRWLEDCIQHGGHVPEGPYILQRYKSIVTFATLHY 149
CW+ +G+K++LAKKF T++VNHRW+E+C++ G V E PY+
Sbjct: 61 ----CWKFEGKKYDLAKKFGTVVVNHRWVEECVKEGRRVSETPYMFD------------- 120
Query: 150 SCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSAGPLSMKLPLADKSSVSTKKYNLLS 209
+G+ GPL ++LP + + TKK N S
Sbjct: 121 -------------------------------SGEEVGPLMIELPAVSEEAKVTKKVNKAS 180
Query: 210 EKLHNY----GNVEDQSTEDICIFADSILPHSSLLDKDLYSDYRKSDGTTHKPKHKLWKR 269
E Y G ST ++ ++ ++K++ ++ T +P L
Sbjct: 181 ETFDKYFSNGGENRSGSTSEL----------ATWMEKNVEANRHSVRLRTKRPSSIL--- 240
Query: 270 ISKQEDPSSSSSRNHFEEPTPSGFFGTEANQHSSPTNGHKVNQFSHDWGLKKLDLAKTIR 329
+K+ + SSR G K + ++
Sbjct: 241 ENKENSGVAESSR-----------------------KGKK----------------RVVK 300
Query: 330 VRRGRSSSLARDERKGESSNQDSTIKSSRRRHWLVNKNSSEDHNKLDIWNFDRDQYHLGT 389
R R+ + + ++++ D++ + N+N ++DH + N + G
Sbjct: 301 QRSYRNLIDLESDEESDNNHHDNSDE---------NQNETQDHREPADENVRGFVFEQGE 360
Query: 390 RNSLTVPSSHWDDETDIDVVNTGEPSNRDQLYDKRGPASDSFEGIEACENQSTSRDINLL 449
++L P D+D + E + ++ + P S S E I+ ++ ++R+
Sbjct: 361 TSALRHPGDLATPNWDVDEIEESENWSHSAVFKR--PRSFSPE-IKPQDDDESTREETEA 420
Query: 450 VENAPRVLSITPEDELHNFNDLQKNIEDPGAELNASLPSTSTELSCVICWTDFSSTRGVL 509
E AP ++SC+ICWT+FSS+RG+L
Sbjct: 421 TEKAP------------------------------------AQVSCIICWTEFSSSRGIL 450
Query: 510 PCGHRFCYSCIQNWADHMPGPSAATFQFIQHEIKLWIMFRTCYGCVLVLSSIHAEALSRK 569
PCGHRFCYSCIQ WAD + RK
Sbjct: 481 PCGHRFCYSCIQKWADRL-------------------------------------VSERK 450
Query: 570 ISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDI-YILPDERTLNNIVQP-SM 629
+TCPLCK++F++ITK+EDA +SDQKIYSQT+P SS +I +LP+E + P +
Sbjct: 541 KTTCPLCKSNFITITKIEDADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTR 450
Query: 630 APVCSACRCREPEDLLISCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQTLYHR 677
A CS C EPE+LLI CHLC R IHSYCLDP LLPWTC HC DLQ +YHR
Sbjct: 601 ASGCSRCYLTEPEELLIRCHLCNFRRIHSYCLDPYLLPWTCNHCNDLQMMYHR 450
BLAST of ClCG05G011930 vs. TAIR 10
Match:
AT4G02110.1 (transcription coactivators )
HSP 1 Score: 70.1 bits (170), Expect = 7.8e-12
Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 0
Query: 12 ANGVLSCPNR-LPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM-SRSITH 71
AN +L P R L G P G +++V ++GY G +R ++++M+ G + + + +TH
Sbjct: 92 ANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTH 151
Query: 72 LVGFNFISPQFSLKSTNNFQIRWICWELQGRKFNLAKKFRTI-IVNHRWLEDCIQHGGHV 131
L IC++ +G K+ LAK+ + I +VNHRWLEDC+++ +
Sbjct: 152 L----------------------ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLL 211
Query: 132 PEGPYILQRYKSIVTFATLHYSCLHTPSRQANFQLSQRSAAPLFNAYVPSLLTGQSAGPL 191
PE Y + Y+ + A+ S + A+ + + S L VP++ + + P
Sbjct: 212 PEVDYEISGYELDIMEASARDS--EDEAEDASVKPANTSPLGLRVGAVPAV---EISKPG 266
Query: 192 SMKLPLADKSSV-STKKYNLLSEK 212
PL + SS+ +T K N L+ K
Sbjct: 272 GKDFPLEEGSSLCNTSKDNWLTPK 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887153.1 | 1.9e-254 | 69.63 | uncharacterized protein LOC120077302 [Benincasa hispida] | [more] |
XP_011651366.1 | 3.3e-246 | 67.80 | uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharact... | [more] |
XP_022983591.1 | 6.6e-231 | 63.89 | E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1... | [more] |
XP_022935568.1 | 2.8e-229 | 63.45 | uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 unchar... | [more] |
KAG6581172.1 | 3.6e-229 | 63.45 | BRCT domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
O04251 | 1.1e-10 | 27.94 | BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L7F3 | 1.6e-246 | 67.80 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1 | [more] |
A0A6J1J2R6 | 3.2e-231 | 63.89 | E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
A0A6J1FAW6 | 1.4e-229 | 63.45 | uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC1114424... | [more] |
A0A6J1D4V1 | 6.3e-211 | 60.86 | uncharacterized protein LOC111016967 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A5D3DV52 | 4.5e-209 | 64.94 | BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
Match Name | E-value | Identity | Description | |
AT1G67180.1 | 2.0e-76 | 30.93 | zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing pro... | [more] |
AT4G02110.1 | 7.8e-12 | 27.94 | transcription coactivators | [more] |