ClCG05G011530 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G011530
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	B3 domain-containing protein
Location	CG_Chr05: 13792769 .. 13793480 (+)
RNA-Seq Expression	ClCG05G011530
Synteny	ClCG05G011530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTGTAAGTTCTTCATTCCTTTACAGTTTTCCATTCCAAAAACCATTACAAAAACAACTCTTAAAACCTTGCTCTTTTACCATCTATTACCCATAAATACTCATGCTACTCTTTTTGGGCTGTAGTTCATTTTCGTCTCTTACTTTTCACTTTAAATTCAATTTATATAATCTTTTTGTACTTTCAAAACATGTATTTTCGTTTTGTAATTTCATTCATTTTAATATTTTTACCTTTCAAGGTTTCAACTTTTTGACATCATCAAATCACTAACCTAACAATGATATAACTATTTCATTATTTGTAGTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

mRNA sequence

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

Coding sequence (CDS)

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

Protein sequence

MEPPQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFSGETKDIPIIID

Homology

[Close]

BLAST of ClCG05G011530 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 97/132 (73.48%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS++LKFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of ClCG05G011530 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 3.5e-51
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS+++KFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of ClCG05G011530 vs. NCBI nr
Match: XP_038903804.1 (B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida])

HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQ+GEILPL GK YH FILSKSH  PI ++ LP KFHS+LPA++IP  + C  K W IDY
Sbjct: 16  PQDGEILPLSGKPYHAFILSKSHVAPICSLVLPAKFHSILPAIVIPAVLFCQGKKWTIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LK GDACVFEL+ECSS++LKFRVQILRG IPFQLH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRVQILRGDIPFQLHDKF 135

Query: 124 SGETKDIPIIID 136
           SGETKD PI ++
Sbjct: 136 SGETKDTPIYLE 147

[Close]

BLAST of ClCG05G011530 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG6597214.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028685.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.1 bits (536), Expect = 6.1e-51
Identity = 95/132 (71.97%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ +P KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS+++KFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of ClCG05G011530 vs. NCBI nr
Match: XP_011650806.1 (B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothetical protein Csa_010770 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 5.1e-50
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQNGE +PL GK YH FILSKSH  PIYN+ LP KFHS+LPA++IP  +LC  K WKIDY
Sbjct: 16  PQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           +GNRR KALD KQW+KFVNDN LK GDA VFELLECSS++LKFRVQIL G IP +LH KF
Sbjct: 76  HGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKF 135

Query: 124 SGETKDIPIIID 136
           SGETK+ PI +D
Sbjct: 136 SGETKETPIHLD 147

[Close]

BLAST of ClCG05G011530 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-18
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 9   ILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYGNRR 68
           +LPLLGK Y   I+ KSH  P + + +P  F  +LP+   P  +    + W + + G R 
Sbjct: 84  VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSWRGRSWGMRFTGGRL 143

Query: 69  SKALDPKQWKKFVNDNGLKCGDACVFELL---ECSSTLLKFRVQILRGHIPFQLHHKFSG 128
            + L+   W+ F  DN L+ GD CVFELL         ++FRVQ+LR  IP ++  +  G
Sbjct: 144 IQRLE-AGWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVLRAEIPARIRGRAGG 203

Query: 129 ETKDIPIIID 136
            T   PI+ID
Sbjct: 204 YTSATPIVID 212

[Close]

BLAST of ClCG05G011530 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 14  GKLYHPFILSKSHAPPIYNICLPTKFHSVL--PALMIPTAILCGEKVWKIDYYGNRRSKA 73
           G  +   +++KSH  P + + +P +F   L  P       +  G K W   Y G+ + K 
Sbjct: 52  GNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKK 111

Query: 74  LDPKQWKKFVNDNGLKCGDACVFELLECSST-LLKFRVQILRGHIPFQLHHKFSGETKDI 133
           LD   W +F  DN L  GDACVFEL+   +   L+F+VQILRG +P ++     G T D 
Sbjct: 112 LD-AGWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSDQ 171

Query: 134 PIII 135
           PI+I
Sbjct: 172 PILI 173

[Close]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51
Identity = 97/132 (73.48%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS++LKFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS+++KFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-50
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQNGE +PL GK YH FILSKSH  PIYN+ LP KFHS+LPA++IP  +LC  K WKIDY
Sbjct: 16  PQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           +GNRR KALD KQW+KFVNDN LK GDA VFELLECSS++LKFRVQIL G IP +LH KF
Sbjct: 76  HGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKF 135

Query: 124 SGETKDIPIIID 136
           SGETK+ PI +D
Sbjct: 136 SGETKETPIHLD 147

[Close]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 89/132 (67.42%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           P+N EI PL  K +H  IL+KSH  PIYN+ LP KFHSVLPA++I   + CG K W +DY
Sbjct: 16  PRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWTVDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR K+LD + W+KFVNDN LK GDACVFEL+ECSS+ LKFRVQILRG IP QLH KF
Sbjct: 76  YGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGDIPVQLHDKF 135

Query: 124 SGETKDIPIIID 136
           SGE+KD PI ID
Sbjct: 136 SGESKDTPIKID 147

[Close]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL
Match: A0A5D3CJR1 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27215G00010 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 40  HSVLPALMIPTAILCGEKVWKIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLEC 99
           +SVLP +MIPTAI CGEKVWK++YYGNRRSKAL+ KQWKKFVNDNGLKCGD CVFELLEC
Sbjct: 2   NSVLPGIMIPTAIYCGEKVWKMNYYGNRRSKALESKQWKKFVNDNGLKCGDGCVFELLEC 61

Query: 100 SSTLLKFRVQILRGHIPFQLHHKFSGETKDIPIIID 136
           +++LLKFRVQILRGHIPFQLHHKF+GETKD PI+ID
Sbjct: 62  TASLLKFRVQILRGHIPFQLHHKFTGETKDTPIVID 97

[Close]

BLAST of ClCG05G011530 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 44.3 bits (103), Expect = 9.1e-05
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0


Query: 60  KIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRG 114
           K + +G R S  +    WKKFV DN L+ GD CVFE     +  L   V I RG
Sbjct: 268 KFNIFGARGSGGIS-TGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRG 320

The following BLAST results are available for this feature:

BLAST of ClCG05G011530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974195.1	2.1e-51	73.48	B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196....	[more]
XP_022941967.1	3.5e-51	72.73	B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197...	[more]
XP_038903804.1	4.6e-51	72.73	B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811...	[more]
XP_023539026.1	6.1e-51	71.97	B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG...	[more]
XP_011650806.1	5.1e-50	71.97	B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothet...	[more]

BLAST of ClCG05G011530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLP4	9.2e-18	36.92	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LHY9	2.0e-12	36.29	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of ClCG05G011530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDC2	1.0e-51	73.48	B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FTK2	1.7e-51	72.73	B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0L3V3	2.5e-50	71.97	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ...	[more]
A0A6J1D033	4.8e-46	67.42	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3CJR1	1.7e-43	84.38	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of ClCG05G011530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33280.1	9.1e-05	42.59	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 16..114 e-value: 2.5E-13 score: 51.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 20..109
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 56..102 e-value: 4.8E-9 score: 36.0
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 57..114 score: 9.911184
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 21..112 e-value: 7.49502E-14 score: 60.8045
IPR044837	B3 domain-containing protein REM16-like	PANTHER	PTHR31391	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	coord: 10..127
None	No IPR available	PANTHER	PTHR31391:SF64	B3 DOMAIN-CONTAINING PROTEIN OS04G0386900	coord: 10..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G011530.2	ClCG05G011530.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding