ClCG05G011170 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCACCTTAAATCTTCTGCTCACAAGGTGTATGATTTCTTGAAGAACAAAATGGACTTTGTTATCCAAATGTTCCCTGATATTTATAAGGGCTGTGACGTTCTGGAAGGAAATGGTTTTTCTCATGGAAGCATCGTTCATTTGAAATATAACTTAGGTGAGGTTTTATTTTGATTTTTAAACTTTTTAAATCTTGTATGTTAACCATTACGTTTTTTAGTTTCTGAAAATTGTGTTTGTGTTCTCACAATTTCTTAATCACGGTTCTATATGTTTTTTAAATAAACGTTTGAATTCTTAATCAAATTCTAGAAACAAAGACAAATTTTTAAAGTTTCGTTTTGATAACCATTTGGTTTTTAGTTTTTGGTTTATGAGCTTTAGTTTTTAGAAGAAACAAAACCATACATGTTTTGTTACTGTTACAAAATACTTGATTGATAATTATTTGGAGAATTATTTTAAATTATAAAATTGTTGAAAATATTTACAAATAATTGCAAAATATCACAGTCTATTTGCGATAGATCGTGATAAACTACTATTCATATATGTCTATCATGAAATTGATAAATACAGATAATACTCTATCAATCAAAGAAGTCCTCTCCTCCAGATGTAATGATCCCAGTTTAGCCCTTCCATGCATTCCTCTTTCTTCTCAAGAAGTCAAAAAAAGAATCAACGGCTAATCAATGAACCCCCGAAACCTACTTTCTTTTCTTGTTTTTCTTTGTTAAACTCTCTACGGTGCGATCTATCACAGATGAACAGTGAAATTTTATTATATTTATAAATATTTTGGTTCTTATTATTTTTTGTTTTATGTTTTAGAAAAACAGAAAAGTAAAAACGTTCTTGACTATTGTGTTTTACTTTTCCAGATTTTACAAAATCAAAATAAGTTTGGATTACTTTTTAAGTTTTATATATATATATTTTTACAAAAGTAGAATCAAAATATTCTTACAATATTTTCAATTAATATATATAATTATAAAATTGCATCTTTTATTTTTAACTTCTTAAAAACCCCACATTGATAAAAACAATATCATTCTATCGAATACACTGATTAATCATAAATCAAATAAAAAAATAACCAAAATAAATATATCGACATCATTAAAAAAAAAAAAAAAAAAAAAAAGTCTTATTTTGTTCTATCTATAGTGCTCAAGGTGTCATATATGAACAGTCTTCTCTTATGATATAACAACCGTGAATGTGACACTTTAACCACATATACCTCAACAAACTCCCCAACGATGAAATTAGGGGGAAAATTCTTTTTGTTTTTGTGTGCGTTCAAACTAATAAGAAAACCACATATTTATAAAATACTAACATACTTTTGTTTAGTTTTCTAAACTTAGCTTGAATTTTGACGACACTCCTAAAATGTAAAGAACAAAATACAGAAACTAAACAGGTGATCAAAGTATTGTTTATAGGCTTAATTTTCAAAAACGGAAAATGAAAAATCATACAGTTATCAATTGAGGCCTTAGATATTGCTTTTTTATGTTTCGGCTTTCAAACATATTATATTAGTCCTTACGCACGTACATATGTGGATAGACTATTATTGTTACCCTTTATACACAATCTTAGAACTTACTATTATTTTTGTGTGTACATGATCAAGTTTTAGGTGTAGATTACTTTCAATTTTTGAGTTCAAAATCAAAATTTCCAAATCTAATATTACATCTATAACTTAGTTAAGAACTTTTGTGACGTCATCTATACTTGGTCAATGACATTATTATTTTTTTCCATTGAGGTCAATAAAGAGTGAGGGGTGGGAGAATTAGCCTATGATCTTTTAGTCGAAAACACATGCCTTAACTAATTGGCTATGCTCAGTTGAGTGATATTAATACAATTATTTAAGTATGGGTTTTATGAGTCAAGTGGATTTCTTTTTGTACAACACTGTGAGGATAGAGGATGAAATCTTTGATGTTAAGCGAGATATTAGATGTCAATTGTTGTTGAGCTAAGCTCACTTCACTATCGATTAGATATACACACCCTTATAACTAACTACCAATTTCAAGCTTTTAGGATTTAACTTATTACATTATACTTTTGTCCTTTTTTTTCTTTTTCCTTGTGGAAATTACATAGGTAGCCCAGCAGAGGTAAAGGAGAGGATAGCTATTGATGATGCAAACAAGTCAATAACTTTTGAGTGCCTTGAAGGAGATGTATTCAGAGATTTTGAGGTGTTCAAATTGAAAATTCAAGTTTTTGACAATGGAAGCAATGGAAGCTCAGTTGATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGCCTCCACCACATAGCTACCTCATATTTGCAGATAAAATCAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGAACTAAAAACCATTAATGGCTTGGCTATTGCAATGTGATCTAAATGGCTTGGCTATTGCAATGTGATCTAAATAAATTATTTATGTTCTAATTACCTC AGAAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCACCTTAAATCTTCTGCTCACAAGGTGTATGATTTCTTGAAGAACAAAATGGACTTTGTTATCCAAATGTTCCCTGATATTTATAAGGGCTGTGACGTTCTGGAAGGAAATGGTTTTTCTCATGGAAGCATCGTTCATTTGAAATATAACTTAGGTAGCCCAGCAGAGGTAAAGGAGAGGATAGCTATTGATGATGCAAACAAGTCAATAACTTTTGAGTGCCTTGAAGGAGATGTATTCAGAGATTTTGAGGTGTTCAAATTGAAAATTCAAGTTTTTGACAATGGAAGCAATGGAAGCTCAGTTGATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGCCTCCACCACATAGCTACCTCATATTTGCAGATAAAATCAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGAACTAAAAACCATTAATGGCTTGGCTATTGCAATGTGATCTAAATGGCTTGGCTATTGCAATGTGATCTAAATAAATTATTTATGTTCTAATTACCTC ATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCACCTTAAATCTTCTGCTCACAAGGTGTATGATTTCTTGAAGAACAAAATGGACTTTGTTATCCAAATGTTCCCTGATATTTATAAGGGCTGTGACGTTCTGGAAGGAAATGGTTTTTCTCATGGAAGCATCGTTCATTTGAAATATAACTTAGGTAGCCCAGCAGAGGTAAAGGAGAGGATAGCTATTGATGATGCAAACAAGTCAATAACTTTTGAGTGCCTTGAAGGAGATGTATTCAGAGATTTTGAGGTGTTCAAATTGAAAATTCAAGTTTTTGACAATGGAAGCAATGGAAGCTCAGTTGATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGCCTCCACCACATAGCTACCTCATATTTGCAGATAAAATCAGCAAAGGCCTTGATGATTACCTTTGCAACAATTGA MAQIAKISEQVHLKSSAHKVYDFLKNKMDFVIQMFPDIYKGCDVLEGNGFSHGSIVHLKYNLGSPAEVKERIAIDDANKSITFECLEGDVFRDFEVFKLKIQVFDNGSNGSSVDWSIEFVKANEDVPPPHSYLIFADKISKGLDDYLCNN Homology
BLAST of ClCG05G011170 vs. NCBI nr
Match: KAG6581204.1 (hypothetical protein SDJN03_21206, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017943.1 hypothetical protein SDJN02_19809, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.1 bits (632), Expect = 5.0e-62 Identity = 113/150 (75.33%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of ClCG05G011170 vs. NCBI nr
Match: XP_038893753.1 (kirola-like [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 6.5e-62 Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of ClCG05G011170 vs. NCBI nr
Match: XP_022935319.1 (kirola-like [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 112/150 (74.67%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of ClCG05G011170 vs. NCBI nr
Match: XP_008457055.1 (PREDICTED: major latex protein 149-like [Cucumis melo] >KAA0056082.1 major latex protein 149-like protein [Cucumis melo var. makuwa] >TYK01535.1 major latex protein 149-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61 Identity = 113/151 (74.83%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of ClCG05G011170 vs. NCBI nr
Match: XP_023528799.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.7 bits (605), Expect = 6.7e-59 Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17 Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 5.6e-16 Identity = 49/147 (33.33%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16 Identity = 44/143 (30.77%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy Swiss-Prot
Match: Q41020 (Major latex protein 22 OS=Papaver somniferum OX=3469 GN=MLP22 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy TrEMBL
Match: A0A6J1F532 (kirola-like OS=Cucurbita moschata OX=3662 GN=LOC111442243 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.0e-62 Identity = 112/150 (74.67%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy TrEMBL
Match: A0A5D3BQS1 (Major latex protein 149-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001000 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.1e-62 Identity = 113/151 (74.83%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy TrEMBL
Match: A0A1S3C4L4 (major latex protein 149-like OS=Cucumis melo OX=3656 GN=LOC103496825 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.1e-62 Identity = 113/151 (74.83%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy TrEMBL
Match: A0A0A0LCM8 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G333840 PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.5e-59 Identity = 110/151 (72.85%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of ClCG05G011170 vs. ExPASy TrEMBL
Match: A0A6J1F4J9 (kirola-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442103 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56 Identity = 102/150 (68.00%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of ClCG05G011170 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of ClCG05G011170 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of ClCG05G011170 vs. TAIR 10
Match: AT1G70830.2 (MLP-like protein 28 ) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = 0
BLAST of ClCG05G011170 vs. TAIR 10
Match: AT1G70830.1 (MLP-like protein 28 ) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = 0
BLAST of ClCG05G011170 vs. TAIR 10
Match: AT1G70830.3 (MLP-like protein 28 ) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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