ClCG05G010020 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGTAAGTTCAAAGATTCATTCTTTTTTCTTCTTTTCTTTACAAGTATACAAACAAGTAGAGGTTCAACCTTTTCTATAATGAGGTGTTTTATCATTACGTTCAGATTCAGGTTGTCGATTTGATGTTTGGTTTTTGAAAATTGAGCTGGTAAACTCTACACCCACATATAAAATTCTTCGTTTTGTTATCTAGTCTCTAGATTCATTTTCTAGAACTGAATTTGACTAAGAATTTAAATTTTTAGCAAAGAAATGGAGAGGAAACAAACATAGCTTTCCAAAATGAAAATTCTTATTATCTTTCTATATACTTACACAAATCAAGAGAGGACAAAAGGAAAAGGAAAATAGAAAAATGTTATTATATTGTCTTTTTGTTTACAGAAGTTGAATTATTGATACTCAAATGGAATGAGCTAAAAAGAAGGTGTTTTTATGTACAGGAATTGTTACTTGAAGAAAGCTAACTCACAGAGATGA ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGAATTGTTACTTGAAGAAAGCTAACTCACAGAGATGA ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGAATTGTTACTTGAAGAAAGCTAACTCACAGAGATGA MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDSSRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSRNEGVLKTVEEEEKTSVFLHEDLINIARKNGNCYLKKANSQR Homology
BLAST of ClCG05G010020 vs. NCBI nr
Match: XP_038877999.1 (uncharacterized protein LOC120070205 [Benincasa hispida]) HSP 1 Score: 304.7 bits (779), Expect = 4.8e-79 Identity = 151/161 (93.79%), Postives = 158/161 (98.14%), Query Frame = 0
BLAST of ClCG05G010020 vs. NCBI nr
Match: XP_011651245.1 (uncharacterized protein LOC105434859 [Cucumis sativus] >KGN57533.1 hypothetical protein Csa_009931 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 1.1e-70 Identity = 143/161 (88.82%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of ClCG05G010020 vs. NCBI nr
Match: XP_008456129.1 (PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo]) HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70 Identity = 142/161 (88.20%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of ClCG05G010020 vs. NCBI nr
Match: XP_022983127.1 (uncharacterized protein LOC111481767 [Cucurbita maxima]) HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66 Identity = 135/161 (83.85%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of ClCG05G010020 vs. NCBI nr
Match: XP_022942817.1 (uncharacterized protein LOC111447733 [Cucurbita moschata]) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65 Identity = 136/162 (83.95%), Postives = 149/162 (91.98%), Query Frame = 0
BLAST of ClCG05G010020 vs. ExPASy TrEMBL
Match: A0A0A0L727 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207340 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 5.2e-71 Identity = 143/161 (88.82%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of ClCG05G010020 vs. ExPASy TrEMBL
Match: A0A1S3C2L8 (uncharacterized protein LOC103496160 OS=Cucumis melo OX=3656 GN=LOC103496160 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 6.8e-71 Identity = 142/161 (88.20%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of ClCG05G010020 vs. ExPASy TrEMBL
Match: A0A6J1IYE6 (uncharacterized protein LOC111481767 OS=Cucurbita maxima OX=3661 GN=LOC111481767 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66 Identity = 135/161 (83.85%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of ClCG05G010020 vs. ExPASy TrEMBL
Match: A0A6J1FRB6 (uncharacterized protein LOC111447733 OS=Cucurbita moschata OX=3662 GN=LOC111447733 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.6e-66 Identity = 136/162 (83.95%), Postives = 149/162 (91.98%), Query Frame = 0
BLAST of ClCG05G010020 vs. ExPASy TrEMBL
Match: A0A5A7T4Q1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001760 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 9.5e-65 Identity = 132/150 (88.00%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of ClCG05G010020 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13 Identity = 58/135 (42.96%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of ClCG05G010020 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 8.3e-13 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of ClCG05G010020 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). ) HSP 1 Score: 70.1 bits (170), Expect = 1.9e-12 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of ClCG05G010020 vs. TAIR 10
Match: AT3G19200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of ClCG05G010020 vs. TAIR 10
Match: AT3G05980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 7.5e-06 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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