ClCG05G007048 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGGCGTTGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCCTGCAATGGTTCGATTGCAGAGTGCTACGAAGAAGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACACATATCGTATGATGTTTTGATTAAAGACAAACCGACTTGCAATAAAGGTGCAGGCAAACCTTACGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGCTGGAATATATAATCGATGTAGGACTTAG ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGGCGTTGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCCTGCAATGGTTCGATTGCAGAGTGCTACGAAGAAGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACACATATCGTATGATGTTTTGATTAAAGACAAACCGACTTGCAATAAAGGTGCAGGCAAACCTTACGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGCTGGAATATATAATCGATGTAGGACTTAG ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGGCGTTGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCCTGCAATGGTTCGATTGCAGAGTGCTACGAAGAAGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACACATATCGTATGATGTTTTGATTAAAGACAAACCGACTTGCAATAAAGGTGCAGGCAAACCTTACGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGCTGGAATATATAATCGATGTAGGACTTAG MKGSFSHQSLGVVLGLLYLLIFSNIVVIAIDSLTSPCNGSIAECYEEEEMLMESEISRRFLEQKTKHISYDVLIKDKPTCNKGAGKPYGKNCKSSEANPYDRGCAGIYNRCRT Homology
BLAST of ClCG05G007048 vs. NCBI nr
Match: KAG6582109.1 (Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018526.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.1 bits (357), Expect = 2.9e-30 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of ClCG05G007048 vs. NCBI nr
Match: XP_022138044.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 118.6 bits (296), Expect = 3.4e-23 Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of ClCG05G007048 vs. NCBI nr
Match: XP_022138261.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 107.8 bits (268), Expect = 6.0e-20 Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of ClCG05G007048 vs. NCBI nr
Match: XP_022138047.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17 Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of ClCG05G007048 vs. NCBI nr
Match: XP_004147646.3 (protein RALF-like 32 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.8e-09 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy Swiss-Prot
Match: O23262 (Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.5e-09 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07 Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy Swiss-Prot
Match: Q2HIM9 (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy TrEMBL
Match: A0A6J1C8Z5 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009300 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23 Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy TrEMBL
Match: A0A6J1C986 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009478 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20 Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy TrEMBL
Match: A0A6J1C9Y4 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009304 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18 Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy TrEMBL
Match: A0A314L8Z7 (Protein ralf-like 32 OS=Nicotiana attenuata OX=49451 GN=RALFL32_1 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of ClCG05G007048 vs. ExPASy TrEMBL
Match: A0A1U7WNT9 (protein RALF-like 32 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104226143 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.6e-16 Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 0
BLAST of ClCG05G007048 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of ClCG05G007048 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 62.4 bits (150), Expect = 2.7e-10 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of ClCG05G007048 vs. TAIR 10
Match: AT4G14010.1 (ralf-like 32 ) HSP 1 Score: 61.6 bits (148), Expect = 4.6e-10 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of ClCG05G007048 vs. TAIR 10
Match: AT3G23805.1 (ralf-like 24 ) HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08 Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of ClCG05G007048 vs. TAIR 10
Match: AT4G13950.1 (ralf-like 31 ) HSP 1 Score: 47.4 bits (111), Expect = 9.0e-06 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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