ClCG05G006380 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCTGCGACAACAGATGAATCAGCAATGAATGATGGAGCTGGAATTGCCAGCAGGGTCGAAATAGAGGGAAACATTTATAGGGAACCTTGCGTGGATTATTGGGGAGGAAGAGAGATTTGGAATATTTTACCAACTTTTAAATGAATTTTCAGCTTATTTTCCATGTAACTAAACAAAATTGATATGTCAGCCAATCAACGTCAACCAATAACAATTGGTCACCATCCCGTAAGGTTAAAGTTAAGATGGGGATTATTTGGAATATTTTGTAATCTTTAGTGATCAAACAGACATCAACCCTAGACTTCTGGGACCAAAAGTGTATTTTGTGGACGTTAAAGAGGTTATGTGGTATTTTTCCCTCTCTAAAACAACATTCATTGTGGTATTGTATCACAACAAATAGATATGAGGTTAACCCCATTGTCTTAGATATTAATGAGGGGTTTTTAATGACTAGGAACCTGCAGAAATGAAATCGCTAGCATCTCCTCTGTTCTCTTGGTTCCTCTATCGACAATAGTAGCAGAATCCATCCAAAGGGGTTTTACTTTTTCCTTTTTTGGTCTCATTACTTCTGTTAGGTACGGAAAGCCCAAATTCAGAAAAAGTTAGGTTCCTTTCATGGTTTGTTGCCCTTAGTAGGAATAATACCTTTGATATCAATTAGGAGTCCTTGGCTGTTGTGCTTCACTTGCAGCGGTGTGTTCTTTATAAGAATGGCGTGGGAAGATTTGGATCATTTATCATATAGGGCTGCTCCTTTTTATTAAGGCGTTCGATGTTGCAACACGATAGACCAAATTTCTCTATCCTCCTTTGGCAAGTGGTCTCTTTGCACTTTCGTGGAGTATTTGGTTGGAAAGAAACTAGAGGTCTTTTTCAGATGTTGAGGATTCTTCGCTTGGATTAATGACTCAAAGGGAGGAATATCATTCGACTCCAAGTAATGGGTTAGTGAGAAGTTCTACACTCCTTTTGAATGGAAATTTATTGGAGGCTACAGAAGATGGAGATTTACCAAATCTTATGCCTATTTATAGTGACACTAACTCTATATCTATTGCCACTTGGTCCATTGTTTTTGTTGTCGTCCCTAACTTTCAAGCCCCAGCTTGCAAATGA ATGGAGGCTGCGACAACAGATGAATCAGCAATGAATGATGGAGCTGGAATTGCCAGCAGGGTACGGAAAGCCCAAATTCAGAAAAAGTTAGGTTCCTTTCATGATGTTGAGGATTCTTCGCTTGGATTAATGACTCAAAGGGAGGAATATCATTCGACTCCAAGTAATGGGTTAGTGAGAAGTTCTACACTCCTTTTGAATGGAAATTTATTGGAGGCTACAGAAGATGGAGATTTACCAAATCTTATGCCTATTTATAGTGACACTAACTCTATATCTATTGCCACTTGGTCCATTGTTTTTGTTGTCGTCCCTAACTTTCAAGCCCCAGCTTGCAAATGA ATGGAGGCTGCGACAACAGATGAATCAGCAATGAATGATGGAGCTGGAATTGCCAGCAGGGTACGGAAAGCCCAAATTCAGAAAAAGTTAGGTTCCTTTCATGATGTTGAGGATTCTTCGCTTGGATTAATGACTCAAAGGGAGGAATATCATTCGACTCCAAGTAATGGGTTAGTGAGAAGTTCTACACTCCTTTTGAATGGAAATTTATTGGAGGCTACAGAAGATGGAGATTTACCAAATCTTATGCCTATTTATAGTGACACTAACTCTATATCTATTGCCACTTGGTCCATTGTTTTTGTTGTCGTCCCTAACTTTCAAGCCCCAGCTTGCAAATGA MEAATTDESAMNDGAGIASRVRKAQIQKKLGSFHDVEDSSLGLMTQREEYHSTPSNGLVRSSTLLLNGNLLEATEDGDLPNLMPIYSDTNSISIATWSIVFVVVPNFQAPACK Homology
BLAST of ClCG05G006380 vs. NCBI nr
Match: XP_008438923.1 (PREDICTED: heparanase-like protein 2 [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 3.8e-22 Identity = 54/70 (77.14%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of ClCG05G006380 vs. NCBI nr
Match: KAA0049528.1 (heparanase-like protein 2 [Cucumis melo var. makuwa] >TYK16206.1 heparanase-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 1.9e-21 Identity = 53/70 (75.71%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of ClCG05G006380 vs. NCBI nr
Match: XP_004134497.1 (heparanase-like protein 2 isoform X2 [Cucumis sativus] >KGN57148.1 hypothetical protein Csa_010747 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 4.2e-21 Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of ClCG05G006380 vs. NCBI nr
Match: XP_011651069.1 (heparanase-like protein 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 4.2e-21 Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of ClCG05G006380 vs. NCBI nr
Match: XP_038882996.1 (heparanase-like protein 1 isoform X3 [Benincasa hispida]) HSP 1 Score: 110.9 bits (276), Expect = 7.1e-21 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.8e-12 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.5e-09 Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy TrEMBL
Match: A0A1S3AY64 (heparanase-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103483878 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.8e-22 Identity = 54/70 (77.14%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy TrEMBL
Match: A0A5A7U2R3 (Heparanase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001350 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.1e-22 Identity = 53/70 (75.71%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy TrEMBL
Match: A0A0A0L5V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165650 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21 Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy TrEMBL
Match: A0A6J1IU86 (heparanase-like protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479365 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.5e-21 Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of ClCG05G006380 vs. ExPASy TrEMBL
Match: A0A6J1IRN1 (heparanase-like protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479365 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.5e-21 Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of ClCG05G006380 vs. TAIR 10
Match: AT5G07830.1 (glucuronidase 2 ) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of ClCG05G006380 vs. TAIR 10
Match: AT5G34940.1 (glucuronidase 3 ) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of ClCG05G006380 vs. TAIR 10
Match: AT5G34940.2 (glucuronidase 3 ) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of ClCG05G006380 vs. TAIR 10
Match: AT5G61250.2 (glucuronidase 1 ) HSP 1 Score: 61.2 bits (147), Expect = 6.0e-10 Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of ClCG05G006380 vs. TAIR 10
Match: AT5G61250.1 (glucuronidase 1 ) HSP 1 Score: 61.2 bits (147), Expect = 6.0e-10 Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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