ClCG05G005950 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G005950
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transcription termination factor MTEF1
Location	CG_Chr05: 5893824 .. 5904157 (-)
RNA-Seq Expression	ClCG05G005950
Synteny	ClCG05G005950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTCACCGACCCACTCCTTTTATTTGTTCTCTTATAGTCTGCCTCACCGCCGCTTGCCGACACTCCTCCGCCGCCAATTTCCTTTTTCGTTCTCTCATCCTCTCGTGAGGCATTCGTGGTTTCTCTCATTCTTCTTCTCAAGAAGGAAACAACATGTCACTTATCATTCTCCTTGCGTTTTTCGCAGTTATGTATCATTTGTTTCGTAGAATTGTTCTTGTTAGACCTCCATCATCAATCTTTGCTCATGGATTTTCTGAAAGTCCGTTGAAATCTCTTAGATACTTATCGACCTCTTAGGAGATTGTATCATCTGCGAAATTTGCTTCGTTGGCTTCTAACTCAGTTCAACTTAAGAACAATGAGAATCCTGTAATTATGTTCTTTGAGAATCACGGATTCTCTAAATCACAGATTTTTGAGATTGTTAAGAAGTTTCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCATTCTTCTATACCAGCCTAGAGTGTTCTTGGTAAGTTCCATCCAATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCCGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGGAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCATTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTTTGAGGATGAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTACTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAATTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAATATGTGAATCTTCCATTGTTGTTTGAGTGTACTGAAAACCGCTTCTTGGACAAATTCATCAACCCCTATAAGACGCGGATACCTGGATTACTGAAGTTGTATGAAGAGAAAGTAAAGGATTTTGAAAGATGAACAGGTTCAATCTCCTTGAAATGTTAACATGTACCTCTTATGTTAGTTGATATATCTATTGATAACTTATGTTCATGAATTTGTGTTTCTACATCATCATCTATACCTTTTAGATTGTTACCCTAGCCAATTTGTTTAAATGATTGTCAGCAGATCAAGTTGTATCTAAATCTATACATATTGTTATCAAATTAGTTTTTATCTTTTTTATCATATATGTATTATCTTCAAGTGTTTGATTTTTTTTAGTTTGCCTTCGATGGATTCCGGTAATTAATTAACATACATTTATAATAGTAGTATGAAAGTATGATATTTAACTAATCTGTATTTACACATACAACATAATTGTAATGTAAAGTTATAAAATTCTAACTAACATTTTTCGTGATTCATGATATAACAAGAATGTGAAATTACCATTTTTGTGATTCTAGATTATAACATAATTTTGTATATTACTAGTCTTTTTTTCCACCAAAATATATATTCAAATCTATTTTATTTTATCAAATTCGATTTTATTTTGTTATTTTTTTTATAAAATATTTGGAATTGGAGAGGTAAAACATTGTTTTTTTAAGCTATAGTTTTTCCCCTTTTATTTTCTATTATGTAACTCCTCGTTTTTATAAATACATTTCTATTTAGTACTACTTGAATGTAGTTCCGATTATACTTATCTCTATGCATCCTTTCAATCATAAAGGAAGCGTATATTAAAAAATATATTTTATAGAAAAGGAAAATTTTATCACATGTCAATTTATGATTAAACACTTTGATGAGTTGAATTCTTAATCAAATTCTAAAACAAAAACTTTTTTTTTTAATTTTTTTTTTTAGTTTTCAAATGTTGGCTTGGTTTTTTAAAACTTTGATACAAGTGGATAACAAAATGAATAATTTTGTAGGCAAAAATAGTGTGTGTAAGCTTAATTTTAAAAAAAAAAAAAAAAACAAAAAAAGACTTAGTTTGGTTGCCCTTTAAATTTTAATTTTTGGTTTTTGAGAATTAAGTATATTTACTCCTACTTCCTTCCATCTTTATCAAGCATAAGAGTCGATTCTCACCCAACTTCCAAAAACAAGAACATATATATATATATATTCAAAACTTGACATAGTTTTTGAAAACGTTGTCACGTTCGTAAAAATTATATAACAAAACAAGAAATTTAGAGGTCGAATATATATTAATAGCCCTCATTTTTTAAAGCTAAAAATAAAAAAATGAAATGATTAAATTGCAAATTTTGATCTATGATTTGAAGAAAGATTTTAGTCTCTATGGTTTATAATTATAGTTTAGTCTCTATGATTTGATAAAACGCTTATAAATAGTCCTTACGATAAGGACTATATATGAAGATTTTATCAGATTATAGAAAATATTTATGAAGTTTTATTAAATCATAAGGATTTAATTTTAATTTTTAAAATTACGTGGAGTAAGTTATGATTTTTTCCACGGATTTATAATTAAACCGTGTTATTAAAAAGACGTTGGTAGTTAATAATAAAAAATGATTATTTCTATTTTATTTTATTTTTAAATAAAAAAACCCTAACCTCCTTCCTTTCCTCTCCTTTTGCTTCTGATTTCTCCGTCTCCAATATTTGCCGGCAGCCGGGTGACCTCACCGGCCCACTCCTTTACTTTGTTCTCTCATAGTCTCCCTCTCTGCTGGTCGCCGGCACTCCTCCGCCGCCAATTTCCTTCTCTGTTCTCTCATAGTTTCATCCTCTCGTGAGGCATTCGTGGTTTCTCCCATTCTTCTTCTCAAGAAGGAAGCAGCAGGTCAGTTTTCCTTCTCCTCGCGTTTTTTACAGTCATGTATCATTTGTTTCGTAGAATCGTTTTTGTTAGACCTCCATCATCAGTCTTTTCTCATGGATTTTTTGAAAGTCCGTTGAAATCTCTGAAATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCTTAAGAACGATGTGAATCCTGTAATTATGTTCTTTGAAAATCATGGATTCTCTAAATCACAGATCTCTGAGCTTGTCAAGAAGCGCCCTCAAATTCTTTCAGCGAAACCCGAGAAAAGCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTACTGTTTTAACACGAAGTTTAAACAGACAAATTATTCCAGCATTTGATTACATTCAAGCCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTTTGCGGGTGTTCTCACTTGGAATCTTCGAAATTCAACTCGTCCCAATATTGAAATTCTGAAACAAATTGGCGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTGTTGGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCCCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCGTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAGGATTGGATGTGAATCTTCTTTTATTGTTAGGAGACCTGCTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCCAAGGGTTTACTTAAGAAAGATGTGAATCTTCCAATGTTGTTTGAGTGTACTGAAAACCGGTTCTTGGACAAATTCATCAACCCCTATAAGAAGCGGATACCTCGATTGTTGAAATTGTATGAAGAGAAAGTAAAGGATTCTAATAGATGAGCAGGTTCAATCTCCTTAAAATATTAATATGTACCTCTCTTCTAATCATCATGGGTTGACCTAATAGTAAAAAGGAGACATAGTCTCAATAAATGTCTAAGAGGTCAAGGGAAACCATGGTAGCCTATATAGGAATTAATTTCTTATGAATTTAGTTAACACCCAAATGTTGTAGGGTAGATATGTATATTGTGTTACTACATTATCATCTATACACCTTTCTTTTTTCTTCCTCTATTTCCTTCTGCAAAATTCATTTACACCGGGGAGAACTAATCCACGAAGTACCATTTAACACAATAATATATGTTATAATGCAAAATAATATTTAAATATTTTCAAATAAATATCATTTAAAATAAGTTGAATTGAATTTAATGTTTTTATTTTAGTACATATATGAGATTTCATTTCAGATTAAAAAAATAAAAACGACAACAACTGCTTATATTTAGAGACTCTGTTTCTTGTTTTTCTATTTCTTTTCTTGCAAATGTGCCAATATTTAGAATTCAATCTCATATAGATTGATGGAATATATATATATATAAATTAACTGTATAAACTTTTGATTTTTCTCTTTTGTCTATTTTATTTAATATTTATACGATGGTTATGATGTTCAATGTTCAGAATGTTTTGTTTATATTGATATTGCTTATGATTTAGATATAATAAGATATATAGTTGGTTTTTTTTTTTGTTTAAGTTTGGCATCTGAATTAATTTTAGATACTCACAAACTTTTTTTAAAATAATATCATTTTAATAAATAATGACAAAAATAAGGTAGAGGTAAAACTATTTTAAAAAATGGGTGGGAAAATCGTAGATGGGTTTCATGATTTTATAAAATTAGCCCACCTGGCATGCAAATTATAGACTCGGTCCACGATTTTGCCCAAATGTCTCGGTCAACCTTGCCATGTGCCACAATGGCATGTTGTCATGCTCTCTCGGTCTCGCTTGTCTCGCTTATCTCGTTCGTCTCCTTCCTTTCCTCACTCACAGTCTTATCTCTCTCGCTCTTGCTTGTCTCCTTCCTTTCTTCACTCACAATCTTATCTCCTCGCTCGTCTTCGTGTCAAAGAAGAAGAAGAAGCTAGAGAAGAATTCGGAGAAGAAGAAGCTAGAGAAGAATTCGGAGAAGAAGAAGAATAGAAAAAAAAGAAAACAAAAAAGAAAAAAGAAGAAGAAAGGGACAGGAGGGAGTCACAAAGAAGATAAAAAAGAAGGAAAAAACAAAAAGAAAAAGAGAAAGAAGAAAACCCGATCAACGTGGTTAAATCGTGGACTCACCAATCTATGTGGTCGGTCCACGATTTGCATGCCATGTGGAAATCGTGAATCCGGTCCATGATTTCACTACCCTACTTTTGTCATCATTTATTAAAATAACATTATTTTTAGAAAACGTTGGATACTCACTCCAATATACAATGAATCTATCTACCACAAAGTAAGAGTATATAGCATTGTACGAGCAAGTTGAGGAATCAATTTGTTTGAGAGGGTTGATTTCTCAAACACGTGGGAAAGCATGACATAACCAAATTGTTCTTAGTTCTTACACATTCGAAAAATTCTCCTTGTCATGACCAAACCAAATATGAGTTCAATTTTTTGGAAGACGAAAGGAAGAATAACATATTAAATTTCAGAAAAGACTGTATTTAAAATTAATCTTGCTTATATGTTTGGAATCTTTTTTAAATTCTCAATAAGTGTGAGCTAATGTTGTTTGTTCGTACTTAAGGTGCTGTATGAGTTTAAGATTGTGTTTTATTTATTTAAAGATATACTTAATCAAAGAGGCGATTAGTTGCAAATTTATTATTATTATTATTATTATTATTATTTATTATTTTTTTAATAAACTATGGAAGGCACTTTGTTTTATTTTATTTTTTATTTTTCAAATACACATGTATTGTTGACAGTTTTGGGCAATAAACTTTATAGTTTATTTTTAGATCATACATTCATTTTTTTTTTTAAATTTAAGTAATCATTTTACAAATTTGTACATGTGACTTTTCCTAGTTAAGTTGGACAAAATTATATTGGATTTGTTGGAATAAAAAAATTTGGATTTTATATTGTAAGAGAAATATCCTCAAAATGTAGTTGAACTATAATGATGCTATCAACGATCATGTTATGTGGTTGGCACAAAATATATGTAACAAATGTCATATTCTCCAATGAAGTTATATGATAAAAAAAAAGTTATATATGACATGCCAACAAAAGGTCAAGTCCACTTATTAAAAAAAACTACATAAACATCTATCTGATAGATATCTTTCACAACTTTCTTCCACGTCCTAAACTTTCATTCATATTATCTTTTTGCCATGATACAAGTTTTTGTTTGGGTTAACTTGGGAAAAAAATATTTTTAAGAAATTCATTTTCATTTAAACATATTTTTATAAAAACTATTTAAAATAAAATCACTAACTTGTCTGTCAACTTTTTAAAAAATGTATTTTTATATACAAGTTTGTTTGGTTTTGCGTTATGAGGGAACTTGTGTACTTTTGTGTCAATAAAGGTGTTTTTATTGAAGTTTATGTGCGTCAACTTAATTTTATATATTTATTGACGTTTTATAACTATCAATAGAGGTGTTCTAGAATTGATAGTTAGTTTTAAACTCTCAATTCCGGTTTTATTTACAATTCTATGCCACAAAATAAAATAAAAAACTCACGTGTCAACAAAACCCAAATTTGTAGTAGTGATAATTGAAAATAGTGGTCATCGAGGTTCGTAGAGGTGGCATATTGGAGTTCGCTGGAGTTGGTTGTCGATGGTGGTAGTTAGACATGGCTGGAGTTGGCCATTGGAAGTGGTGGCCAGAGTTGGACAACAAAAGTATTAATGGTGAATAGGACTGAGTGCACTGTCAGTGAACATGAATATAAAATATTGGTGACATTCAAAATTGGCCTCCTAAATACTGTGATAGCAACTTAGGCCTAAACACCCTTAAAATAGTTAGTAATCAAAATTGATTGTTTTATTTTTAAACGAGCTTACATAAACTTATTTCTAAGAATGACCTAAAATTTAGGTTTAAATTTTATTTTGGTCCCTTAACTTTGAATCTTATCCTATTTTGGTTCCTAAACTTTAAAAAACGTTTGATTTAGTCCATGAACTTTTAAAAAGTGCTTACTTTGGTCCCTGCTGTTAAGCTTCGGTTAACTCTTTAAATGGTGAATTTTTGGATGACTAGGTTACCAAATAAAATTAGACACCCAAAAAAAATCTAAGATTTCAATTTTGAATGAGATAGGTATAAATCAATTTGCTATAGGAGAACTCAAAAGTCATTTTGCGTTCAAGATTTTGGTCGGTCACTATTTTGAGGCGTTGTTCCCTTAAATACGAGGTATTTTTGTGATTCATAGAAGTATTTTTCTTAATCTTCAACCATAGTCTCTTATTTTTGTGCGACCTAACATTTATTTGCAATTTTCTAAAATTTATTTTCTATGTAGATTGCATTTATTTGTACTTTTTAGTTTATTTTATATTCTCACAGGATGTTTTATTCTTGGATTTAAAAGTTTTTGTTGAAAGTAATTGAGAAAAAAGAAAGTTGGAATGGTTACATGAAAAATGGGCAGATAAAAAGAAAAAACAGAAAATAATGAAAGTGTTGATGACACTTTGAGAAAAATACGTAGTCTTAGTCCATTAATAAATTTAGGGATCTAAGTAGAATAACATTCAAAGTTTGAGGACGAAAATAATATTTAAACTTAAAATTTATAAATTCATAAATCCTCACTCCCTTCATTTCCCCTCTTTTTGCTTCTGATTTCTCCGTCTCCCACATTTGCCGGCAGCCGCATAACCTCACCGGCACACTCCTTGTTCTCTCACAGTCTCCCTCTCTGCCGCTTGCGGGCACTCCGCCGCCATTTTCCTTCTCTCATGTGAGGTATTCGTGGTTTCTCCCATTCTTCTTCTCAAGAAGGAAGCAGCAGGTCGGTTTCCTTCTCCTCGCGCTTTTTAACAGTCATGTATCATTTGTTTCGTAGAATCGTTCTTGTTAGACCTCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGAATGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCGTAAGAACAATGAGAAGCCTGTAATTATGTTATTTGAGAATCACGGATTCTCTAAATCACAGATCTCTGAGATTGTCAAGAAGTTCCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTGGTGTTTTAAAACCAAGTTTAAACAGACGAATTATTCCAGCCTTTGATTACATCCAAACCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTCTGTGGGTCTTCTCACATGGGACCTTCAAGTTTCAGTTCGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGAAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGCTTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAGCAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCCTGAAGAAGAGATCCTTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGCTTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTGTAATTTCATTTAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCGTTTGTTGTTTGAGTGTACTGAAAACTGCTTCTTGGACAAATTCATCAACCCCTACAAGAAGCAGATACCTGGATTGTTGAAGTTGTATGAAGAGAAAGTAAAGGGTTCTAAAAGATGAATAGGTTCAATCTCCTTGAAATGTCAACATGTTCCTCTTCTATTAGTTGATATATCTATAAGTTCCTCTTCTATTAGTTGATATATCTATTGACAACTTATGTTTATGAATTTGTGTTTCTACATCATCATCTATACCTTTTAGATTGTTCACTAAATGATGATATGTACTTAATAGGCGGGAGGAACAAACAAGTTTTGCATTCAAACGGTTCAATTACACAAGAATTTTTTTTAATAAAATTAGGCCTTAACATTCATACAACAAATGGGGTTAGGATATTCAAACCTATAACCTTTTGTTGAGTTATATTCAGGTTGACTATTTAGGCTTTGGTTGTTAATATTGTCGCTAATTGAATGATATGTGATATGTTAATAGACTCTATTTTTTTCAATCGTCGGCTCTATCACTTGTCTGTCAGATCATGTTAAATTAGGTCATACTATCATGTAATTAATTATGTAAATTTGAAGTTCAGATAGTTGTGTTGTCAGCTAAACTCTTTTGTGAAAGGAAGAGACCAACCATAAGTTGGTTGAGGGTAGTTTGTAATCTTCCAATTAATTGCTAAAGTGGAATTTTGTTGTTCTGTTAGGGGCCTCAATGGCTGGATGATGTTGAGCAGTTCTATGTAGATTGGAAGCAAGTTAGTACCAATGGCTCTGGATGACATTGCCATTTTTATAAGTAGTATGCGATCTATATTAATACACTATATATTTATTAAAGACATAAATCAATAGAATATAGTTTCAAATAAGTTAAAATTAAATTGGTTGATAAAGTGTCATTCAAAACTAAACATGTTGACCAACCCGGTACAACATATCATTCAAAATCAGGCCAACCTGAGGAAGAATGAGCCACGGGCTTGCAAAGGGCAGACTCTGTGGAGGAATGGCTCGGAGGTGGTGGGCTCGATTGTCTCCTTCTATTGGTTGCCTTCCCCTTCCCCAATAACTGCCCCTGCATTGCTTCAACAAAGAGTTGAATCCGAAAAGGGCCATGGAAACTGGAGGAAGATGAAGTGATTTTGAACCGGCCAAAGACCCAACTTCAAAAAGTAAGAATTGTTGGTTGAAGGCTTCTACTTTAGTTTTTCTTGGTGAATTCGAAGGTGTTTGATTGTGGGTTGAGGTTAAGTTTTTGTTTTATGTAGAGTTTTTTTTTTTTTTGTGCTTGCAAACTGTTTTACAAATCGACCGACAAGAGTAATTTCTGGATTTATGGTGATTCAAGTTGTGGTATGG

mRNA sequence

ATGACCTCACCGACCCACTCCTTTTATTTGTTCTCTTATAGTCTGCCTCACCGCCGCTTGCCGACACTCCTCCGCCGCCAATTTCCTTTTTCGTTCTCTCATCCTCTCGAGATTGTATCATCTGCGAAATTTGCTTCGTTGGCTTCTAACTCAGTTCAACTTAAGAACAATGAGAATCCTGTAATTATGTTCTTTGAGAATCACGGATTCTCTAAATCACAGATTTTTGAGATTGTTAAGAAGTTTCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCATTCTTCTATACCAGCCTAGAGTGTTCTTGGTAAGTTCCATCCAATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCCGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGGAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCATTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTTTGAGGATGAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTACTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAATTTATCAAGTTTTGCTGTCAAAGGTCATGTATCATTTGTTTCGTAGAATCGTTTTTGTTAGACCTCCATCATCAGTCTTTTCTCATGGATTTTTTGAAAGTCCGTTGAAATCTCTGAAATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCTTAAGAACGATGTGAATCCTGTAATTATGTTCTTTGAAAATCATGGATTCTCTAAATCACAGATCTCTGAGCTTGTCAAGAAGCGCCCTCAAATTCTTTCAGCGAAACCCGAGAAAAGCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTACTGTTTTAACACGAAGTTTAAACAGACAAATTATTCCAGCATTTGATTACATTCAAGCCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTTTGCGGGTGTTCTCACTTGGAATCTTCGAAATTCAACTCGTCCCAATATTGAAATTCTGAAACAAATTGGCGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTGTTGGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCCCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCGTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAGGATTGGATGTGAATCTTCTTTTATTGTTAGGAGACCTGCTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCCAAGGGTTTACTTAAGAAAGATGTGAATCTTCCAATGTTGTTTGAGTGTACTGAAAACCGGTTCTTGGACAAATTCATCAACCCCTATAAGAAGCGGATACCTCGATTGTTGAAATTGTATGAAGAGAAACCGCATAACCTCACCGGCACACTCCTTGTTCTCTCACAGTCTCCCTCTCTGCCGCTTGCGGGCACTCCGCCGCCATTTTCCTTCTCTCATGTGAGAATCGTTCTTGTTAGACCTCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGAATGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCGTAAGAACAATGAGAAGCCTGTAATTATGTTATTTGAGAATCACGGATTCTCTAAATCACAGATCTCTGAGATTGTCAAGAAGTTCCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTGGTGTTTTAAAACCAAGTTTAAACAGACGAATTATTCCAGCCTTTGATTACATCCAAACCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTCTGTGGGTCTTCTCACATGGGACCTTCAAGTTTCAGTTCGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGAAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGCTTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAGCAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCCTGAAGAAGAGATCCTTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGCTTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTGTAATTTCATTTAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCGTTTGTTGTTTGAGTGTACTGAAAACTGCTTCTTGGACAAATTCATCAACCCCTACAAGAAGCAGATACCTGGATTGTTGAAGTTGTATGAAGAGAAAGGGCCTCAATGGCTGGATGATGTTGAGCAGTTCTATGTAGATTGGAAGCAAGTTAGTACCAATGGCTCTGGATGACATTGCCATTTTTATAAGTAGTATGCGATCTATATTAATACACTATATATTTATTAAAGACATAAATCAATAGAATATAGTTTCAAATAAGTTAAAATTAAATTGGTTGATAAAGTGTCATTCAAAACTAAACATGTTGACCAACCCGGTACAACATATCATTCAAAATCAGGCCAACCTGAGGAAGAATGAGCCACGGGCTTGCAAAGGGCAGACTCTGTGGAGGAATGGCTCGGAGGTGGTGGGCTCGATTGTCTCCTTCTATTGGTTGCCTTCCCCTTCCCCAATAACTGCCCCTGCATTGCTTCAACAAAGAGTTGAATCCGAAAAGGGCCATGGAAACTGGAGGAAGATGAAGTGATTTTGAACCGGCCAAAGACCCAACTTCAAAAAGTAAGAATTGTTGGTTGAAGGCTTCTACTTTAGTTTTTCTTGGTGAATTCGAAGGTGTTTGATTGTGGGTTGAGGTTAAGTTTTTGTTTTATGTAGAGTTTTTTTTTTTTTTGTGCTTGCAAACTGTTTTACAAATCGACCGACAAGAGTAATTTCTGGATTTATGGTGATTCAAGTTGTGGTATGG

Coding sequence (CDS)

ATGACCTCACCGACCCACTCCTTTTATTTGTTCTCTTATAGTCTGCCTCACCGCCGCTTGCCGACACTCCTCCGCCGCCAATTTCCTTTTTCGTTCTCTCATCCTCTCGAGATTGTATCATCTGCGAAATTTGCTTCGTTGGCTTCTAACTCAGTTCAACTTAAGAACAATGAGAATCCTGTAATTATGTTCTTTGAGAATCACGGATTCTCTAAATCACAGATTTTTGAGATTGTTAAGAAGTTTCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCATTCTTCTATACCAGCCTAGAGTGTTCTTGGTAAGTTCCATCCAATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCCGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGGAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCATTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTTTGAGGATGAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTACTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAATTTATCAAGTTTTGCTGTCAAAGGTCATGTATCATTTGTTTCGTAGAATCGTTTTTGTTAGACCTCCATCATCAGTCTTTTCTCATGGATTTTTTGAAAGTCCGTTGAAATCTCTGAAATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCTTAAGAACGATGTGAATCCTGTAATTATGTTCTTTGAAAATCATGGATTCTCTAAATCACAGATCTCTGAGCTTGTCAAGAAGCGCCCTCAAATTCTTTCAGCGAAACCCGAGAAAAGCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTACTGTTTTAACACGAAGTTTAAACAGACAAATTATTCCAGCATTTGATTACATTCAAGCCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTTTGCGGGTGTTCTCACTTGGAATCTTCGAAATTCAACTCGTCCCAATATTGAAATTCTGAAACAAATTGGCGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTGTTGGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCCCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCTTGAAGAAGAGATCCGTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAGGATTGGATGTGAATCTTCTTTTATTGTTAGGAGACCTGCTCTAATTTCATTGAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCCAAGGGTTTACTTAAGAAAGATGTGAATCTTCCAATGTTGTTTGAGTGTACTGAAAACCGGTTCTTGGACAAATTCATCAACCCCTATAAGAAGCGGATACCTCGATTGTTGAAATTGTATGAAGAGAAACCGCATAACCTCACCGGCACACTCCTTGTTCTCTCACAGTCTCCCTCTCTGCCGCTTGCGGGCACTCCGCCGCCATTTTCCTTCTCTCATGTGAGAATCGTTCTTGTTAGACCTCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGAATGTATCATCTCCGGAATCTGCTTCGTTGGCTTCTAACTTTGTTCAGCGTAAGAACAATGAGAAGCCTGTAATTATGTTATTTGAGAATCACGGATTCTCTAAATCACAGATCTCTGAGATTGTCAAGAAGTTCCCTCAAGTTCTTTCAGCGAAACCCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGGTTGCCAAATTAATAAGTGTTTTTCCTGGTGTTTTAAAACCAAGTTTAAACAGACGAATTATTCCAGCCTTTGATTACATCCAAACCCTGCTTCGAACTGAGGAGAAGACTATCGCAGCCATAAAACGCTCTGTGGGTCTTCTCACATGGGACCTTCAAGTTTCAGTTCGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAACATTTCAACCATTCTTCTGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGAAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGCTTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAGCAATGAGCAAATCTACATGGGATAAGAAGATTGAAGTTTATAGGAAATGGGGATGGCCTGAAGAAGAGATCCTTTTGGCTTTTGGAAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAGCTTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTGTAATTTCATTTAGTTTAAAGAAGAGGATTTTGCCTAGAGGCTCAGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCGTTTGTTGTTTGAGTGTACTGAAAACTGCTTCTTGGACAAATTCATCAACCCCTACAAGAAGCAGATACCTGGATTGTTGAAGTTGTATGAAGAGAAAGGGCCTCAATGGCTGGATGATGTTGAGCAGTTCTATGTAGATTGGAAGCAAGTTAGTACCAATGGCTCTGGATGA

Protein sequence

MTSPTHSFYLFSYSLPHRRLPTLLRRQFPFSFSHPLEIVSSAKFASLASNSVQLKNNENPVIMFFENHGFSKSQIFEIVKKFPQVLSAKPEKTILLYQPRVFLVSSIQFKEIVEEVKEMGFNPLRLKFVLAVFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFVNKIGCESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVNPVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGTLLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTSSENVSSPESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMDFFVNKLGCESSFIARRPAVISFSLKKRILPRGSVYQVLLSKGLIKKDVNLRLLFECTENCFLDKFINPYKKQIPGLLKLYEEKGPQWLDDVEQFYVDWKQVSTNGSG

Homology

[Close]

BLAST of ClCG05G005950 vs. NCBI nr
Match: KAA0049463.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 912.1 bits (2356), Expect = 4.0e-261
Identity = 490/742 (66.04%), Postives = 568/742 (76.55%), Query Frame = 0


Query: 226 MYHLFRRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVN 285
           MY+LFRR + +RP SSVFSHGF E PLKSL+YLSTSS+IVSSP SA LASN +Q KN   
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRK 60

Query: 286 PVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFP 345
            VI    +HGFS+SQIS+L K+ PQILSA PEKSLLPKLLFFQSKGLSSPE+ KL+  FP
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 346 TVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVP 405
            VLT SL+++IIPAFDYIQA+L +EEKT+A+IK+FAG+L  +LR S  PNIEILKQIGVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 406 DSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKI 465
           DSNI   L YQPRV L++ +RFKE VE V EMGFNP +L+FV+AVF LR M+KSTWDKK+
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 466 EVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSL 525
           EVYRKWG  EEEI LAF RHPW MM SEDKING MDFFVN++GCE+SF  RRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 526 KKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKP 585
           KKRILPRG VYQVLLSKGL+KK  NL + FE +EN F++KFINP+K++IP LL+L     
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL----- 360

Query: 586 HNLTGTLLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTS 645
                                          I+L+R PSSVF+HGFSESPLK LR+LSTS
Sbjct: 361 -------------------------------ILLLRYPSSVFSHGFSESPLKFLRFLSTS 420

Query: 646 SENVSSPESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLL 705
           SE VSSP+SASLASN VQ +NN K           S S               +PEK+LL
Sbjct: 421 SEIVSSPKSASLASNAVQLENNRKA-------EAASNS-------------FCEPEKSLL 480

Query: 706 PKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSV 765
           PKLLF QSKGLSSPE+ K +   P VL  SLN+RII  FDYIQ +L +EEKT+AAIK+  
Sbjct: 481 PKLLFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA 540

Query: 766 GLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNP 825
           G+L  DL++SV PNIEILKQ GVPDSNI   L YQPRVFL +SIRFK+IVE V EMGFNP
Sbjct: 541 GILAQDLRISVGPNIEILKQNGVPDSNILKYLQYQPRVFLTSSIRFKEIVERVAEMGFNP 600

Query: 826 LRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMD 885
            +L+FV+AVFALRAM+KSTWDKK+EVYRKWG  EEEI LAF RHPWCMM SEDKING MD
Sbjct: 601 QQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMVSEDKINGAMD 660

Query: 886 FFVNKLGCESSFIARRPAVISFSLKKRILPRGSVYQVLLSKGLIKKDVNLRLLFECTENC 945
           FFVNK+GCESSF ARRP V+S SLKKRILPRG VYQVLLSKGLIKK  NL L F  +E+ 
Sbjct: 661 FFVNKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHR 686

Query: 946 FLDKFINPYKKQIPGLLKLYEE 968
           F++KFINP+K+QIPGLL+LYE+
Sbjct: 721 FIEKFINPHKEQIPGLLELYEQ 686

[Close]

BLAST of ClCG05G005950 vs. NCBI nr
Match: KAB2095310.1 (hypothetical protein ES319_A01G027900v1, partial [Gossypium barbadense])

HSP 1 Score: 630.6 bits (1625), Expect = 2.4e-176
Identity = 401/1080 (37.13%), Postives = 582/1080 (53.89%), Query Frame = 0


Query: 41   SAKFASLASNSVQLKNNENP--VIMFFENHGFSKSQIFEIVKKFPQVLSAKPEKTIL--- 100
            S + AS AS  V  +  E P  + +F ENHGFSK+QI  ++KK P++L    EKT+L   
Sbjct: 58   STELASFASKYVHFETPERPDSLFVFLENHGFSKTQILNLIKKRPRLLVCDTEKTLLPKI 117

Query: 101  ------------------------------------------------------------ 160
                                                                        
Sbjct: 118  EYLHSLGFSRPELAKILSSYPTLLMHSLKNQIIPNFNLLRNLFHSDDKAIKAIKRFTPIL 177

Query: 161  -------LY----------------------QPRVFLVSSIQFKEIVEEVKEMGFNPLRL 220
                   LY                      QPR  L + ++ KEIVEE K MGF+    
Sbjct: 178  VYDLESYLYPNMNVLSGIGVPESNILVLLNRQPRSLLYNPVRLKEIVEEAKRMGFDSSTK 237

Query: 221  KFVLAVFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFV 280
             F+  V A ++M+KST +KK  VYR+WGW ++EIH AF RHP CM   ED++  +MDF V
Sbjct: 238  MFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEAFRRHPLCMTVSEDKVMAIMDFLV 297

Query: 281  NKIGCESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHG 340
            NK+G  S+ IA++P+++  S +K I+PR    + LLS+ + +  +  V       VF   
Sbjct: 298  NKMGYSSTLIAKQPSILRQSFRKNIVPRALFARELLSQGLVNDLKLSVLFDTSEKVFIRM 357

Query: 341  F-----------------------------------FESPLKSLKYL------------S 400
            F                                   F SP+   K+L            +
Sbjct: 358  FVDRFVNKAPDLLKLYKEKLKISEKKQTLEPVPAVSFTSPILWRKFLILSLGSHKRGCSN 417

Query: 401  TSSEIVS--------SPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELVKKRP 460
             +S  VS        +PE AS AS +V  +    P  +  F ENHG              
Sbjct: 418  QNSFTVSYLMNKCGFTPEFASFASKYVHFETPERPDSLFAFLENHG-------------- 477

Query: 461  QILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRT 520
             +L    EK+LLPKL FF S G S PE+ K+++ +P VL  SL +QIIP+F+ ++ L ++
Sbjct: 478  -LLIYDTEKTLLPKLEFFYSIGFSRPELTKILTSYPAVLICSLKKQIIPSFNLLRNLFQS 537

Query: 521  EEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKE 580
            ++K I  IKR+  +  ++   +  PN+ +L+ IGVP+SNI  +L +QPR LL   +R KE
Sbjct: 538  DDKAIKTIKRYGAIFVYDFERNLIPNMNLLRGIGVPESNILMLLNHQPRPLLYDQVRLKE 597

Query: 581  IVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCM 640
            IVEEVK MGF+    KFV  V AL +MSKST +KK +VYR+WGW ++EI  AF R+P CM
Sbjct: 598  IVEEVKRMGFDSSTKKFVDVVIALSSMSKSTLEKKFDVYRRWGWSDQEIHEAFQRYPMCM 657

Query: 641  MASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDV 700
              SEDKI  VMDF VN++G  S+ I ++ +++  SL+KRI+PR    Q LLS+GL+ KD+
Sbjct: 658  AVSEDKIMAVMDFLVNKMGYSSTLIAKQSSILRQSLEKRIVPRALFAQELLSQGLV-KDL 717

Query: 701  NLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGTLLVLSQSPSLPLAGTPPP 760
             L +LF+ +E  F+         RI  LL   +    + +  L ++  S +L        
Sbjct: 718  KLSVLFDTSEKVFI---------RITSLLHGRQAMASSQSFNLSIIKISSTLRF------ 777

Query: 761  FSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTSSENVSSPESASLASNFVQRKNNEK 820
            FS S               H F+ S L         ++   SPESAS  SN+V  +  EK
Sbjct: 778  FSISSNE------------HSFTVSYL--------INKCGFSPESASRTSNYVHFETPEK 837

Query: 821  P--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISV 880
            P  +I+  ENHGFSK+QI  ++K+ P++L +  EKTLLPKL F  S G S PE+AKL+S 
Sbjct: 838  PDSLIIFLENHGFSKTQIKNLIKRQPKLLHSDTEKTLLPKLEFLYSIGFSRPELAKLLSD 897

Query: 881  FPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIG 940
            +P +L+ SL +RIIP+F+ ++ L ++++K + +IKR  G+L  D + ++ PN+ IL+ IG
Sbjct: 898  YPTLLRASLEKRIIPSFNLLRNLFQSDDKAVKSIKRFAGILVSDFEKNLLPNMNILRGIG 957

Query: 941  VPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWDK 968
            VP++NI   L  +PR  + N +R ++IVEEVK MG +  R KF+  VFA+++M+KST DK
Sbjct: 958  VPETNILLQLHRKPRTLMFNPVRLEEIVEEVKRMGIDTSRKKFLDVVFAMKSMTKSTLDK 1017

[Close]

BLAST of ClCG05G005950 vs. NCBI nr
Match: KJB12621.1 (hypothetical protein B456_002G027700 [Gossypium raimondii])

HSP 1 Score: 597.4 bits (1539), Expect = 2.2e-166
Identity = 384/1095 (35.07%), Postives = 571/1095 (52.15%), Query Frame = 0


Query: 41   SAKFASLASNSVQLKNNENP--VIMFFENHGFSKSQIFEIVKKFPQVLSAKPEKTIL--- 100
            S + AS AS+ V  +  E P  + +F ENHGFS++QI  ++KK P++L    EKT+L   
Sbjct: 58   STELASRASSYVHFETPEKPDSLFVFLENHGFSRTQILNLIKKRPRLLVCDTEKTLLPKI 117

Query: 101  ------------------------------------------------------------ 160
                                                                        
Sbjct: 118  EYLHSLGFSRPELAKILSSYPTLLMHSLKNQIIPNFNLLRNLFHSDDKAIKAIKRFTPIL 177

Query: 161  -------LY----------------------QPRVFLVSSIQFKEIVEEVKEMGFNPLRL 220
                   LY                      QPR  L + ++ KEIVEE + MGF+P   
Sbjct: 178  VYDLESYLYPNMNVLRVIGVPESNILVLLNRQPRSLLYNPVRLKEIVEEAERMGFDPSTK 237

Query: 221  KFVLAVFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFV 280
             F+  V A ++M+KST +KK  VYR+WGW ++EIH A  RHP CM   ED++  +MDF V
Sbjct: 238  MFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEALRRHPLCMTVSEDKVMAIMDFLV 297

Query: 281  NKIGCESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHG 340
             K+G  S+ IA++P+++  S +K I+PR    + LLS+ + +  +  V       VF   
Sbjct: 298  KKMGYSSTLIAKQPSILRKSFRKNIIPRALFARELLSQGLVNDLKLSVLFDTSEKVFIRM 357

Query: 341  F-----------------------------------FESPLKSLKYL------------- 400
            F                                   F SP+   K+L             
Sbjct: 358  FVDRFVNKAPELLKLYKEKLKISEKKQTLEPVPAVSFSSPILWGKFLILSLGSHKRGCSN 417

Query: 401  ---STSSEIVS----SPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELVKKRP 460
                T S +++    S E AS AS++V  +    P  +  F ENHG              
Sbjct: 418  GHSFTVSYLINKCGFSTELASRASSYVHFETPEKPDSLFAFLENHG-------------- 477

Query: 461  QILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRT 520
             +L    EK+LLPK+ +  S G S P++AK++S +P++L RSL  QIIP F+ ++ L  +
Sbjct: 478  -LLVCDTEKTLLPKIEYLHSLGFSRPKLAKILSSYPSLLMRSLKNQIIPNFNLLRNLFHS 537

Query: 521  EEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKE 580
            ++K I  IKR+  +L ++L +   PN+ +L+ IGVP+SNI  +L  QPR LL + +R KE
Sbjct: 538  DDKAIKVIKRYTPILVYDLESYLYPNMNVLRGIGVPESNILVLLNRQPRSLLYNPVRLKE 597

Query: 581  IVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCM 640
            IVEE + MGF+P    F+  V AL++M+KST +KK +VYR+WGW ++EI  AF RHP CM
Sbjct: 598  IVEEAERMGFDPSTKMFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEAFRRHPLCM 657

Query: 641  MASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDV 700
              SEDK+  +MDF V ++G  S+ I ++P+++  S +K I+PR    + LLS+GL+  D+
Sbjct: 658  TVSEDKVMAIMDFLVKKLGYSSTLIAKQPSILWKSFRKNIVPRALFARELLSQGLV-NDL 717

Query: 701  NLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGTLLVLSQSPSLPLAGTPPP 760
             L +LF+ +E  F+         RI                                   
Sbjct: 718  KLSVLFDTSEKVFI---------RIT---------------------------------- 777

Query: 761  FSFSHVRIVLVRPPSSVFAHGFSESPLK---SLRYLSTSSENVS------------SPES 820
             SF H R  +  P S      F+ S +K   +LR+ S +S   S            +PE 
Sbjct: 778  -SFLHGRQAMACPQS------FNLSMIKKSTTLRFFSKTSNQNSFTVSYLMNKCGFTPEF 837

Query: 821  ASLASNFVQRKNNEKP--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQ 880
            AS AS +V  +  E+P  +    ENHGFSK+QI  ++K+ P++L    EKTLLPKL FF 
Sbjct: 838  ASFASKYVHFETPERPDSLFAFLENHGFSKTQILNLIKRRPRLLIYDTEKTLLPKLEFFY 897

Query: 881  SKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDL 940
            S G S PE+ K+++ +P VL  SL ++IIP+F+ ++ L ++++K I  IKR   +  ++ 
Sbjct: 898  SIGFSRPELTKILTSYPAVLICSLKKQIIPSFNLLRNLFQSDDKAIKTIKRYGAIFVYEF 957

Query: 941  QVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVL 968
            + ++ PN+ +L+ IGVP+SNI  +L +QPR  L + +R K+IVEEVK MGF+    KF+ 
Sbjct: 958  ERNLIPNMNVLRGIGVPESNILMLLNHQPRPLLYDQVRLKEIVEEVKRMGFDSSTKKFID 1017

[Close]

BLAST of ClCG05G005950 vs. NCBI nr
Match: KAG4160852.1 (hypothetical protein ERO13_D01G023463v2 [Gossypium hirsutum])

HSP 1 Score: 586.6 bits (1511), Expect = 3.9e-163
Identity = 377/1054 (35.77%), Postives = 562/1054 (53.32%), Query Frame = 0


Query: 32   FSHPLEIVSSAKFASLASNSVQLKNNENPVIMFFENHGFSKSQIFEIVKKFPQVL----- 91
            FS P      + + +L  +S  LKN   P      N   S  +  + +K+F  +L     
Sbjct: 125  FSRPELAKILSSYPTLLMHS--LKNQIIPNFNLLRNLFHSDDKAIKAIKRFTPILVYDLE 184

Query: 92   ------------SAKPEKTILLY---QPRVFLVSSIQFKEIVEEVKEMGFNPLRLKFVLA 151
                           PE  IL+    QPR  L + ++ KEIVEE + MGF+P    F+  
Sbjct: 185  SYLYPNMNVLRGIGVPESNILVLLNRQPRSLLYNPVRLKEIVEEAERMGFDPSTKMFLSV 244

Query: 152  VFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFVNKIGC 211
            V A ++M+KST +KK  VYR+WGW ++EIH A  RHP CM   ED++  +MDF V K+G 
Sbjct: 245  VIALKSMTKSTLEKKFDVYRRWGWSDQEIHEALRRHPLCMTVSEDKVMAIMDFLVKKMGY 304

Query: 212  ESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHGF---- 271
             S+ IA++P+++  S +K I+PR    + LLS+ + +  +  V       VF   F    
Sbjct: 305  SSTLIAKQPSILRKSFRKNIIPRALFARELLSQGLVNDLKLSVLFDTSEKVFIRMFVDRF 364

Query: 272  ----------FESPLK--------------SLKYLSTSSE-------------------- 331
                      ++  LK               +KY+S  +E                    
Sbjct: 365  VNKAPELLKLYKEKLKISEKKQTLEFNLNLYIKYISLKTEKEYTSEGLAGAGSELQLSHS 424

Query: 332  -----IVS-------------------------SPESASLASNFVQLKNDVNP--VIMFF 391
                 I+S                         S E AS AS++V  +    P  + +F 
Sbjct: 425  LGKFLILSLGSHKRGCSNGHSCTVSYLINKCGFSTELASRASSYVHFETPEKPDSLFVFL 484

Query: 392  ENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRS 451
            ENHG               +L    EK+LLPK+ +  S G S P++AK++S +P++L RS
Sbjct: 485  ENHG---------------LLVCDTEKTLLPKIEYLHSLGFSRPKLAKILSSYPSLLIRS 544

Query: 452  LNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNIST 511
            L  QIIP F+ ++ L  +++K I  IKR+  +L ++L +   PN+ +L+ IGVP+SNI  
Sbjct: 545  LKNQIIPNFNLLRNLFHSDDKAIKVIKRYTPILVYDLESYLYPNMNVLRGIGVPESNILV 604

Query: 512  ILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKW 571
            +L  QPR LL + +R KEIVEE + MGF+P    F+  V AL++M+KST +KK +VYR+W
Sbjct: 605  LLNRQPRSLLYNPVRLKEIVEEAERMGFDPSTKMFLSVVIALKSMTKSTLEKKFDVYRRW 664

Query: 572  GWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILP 631
            GW ++EI  AF RHP CM  SEDK+  +MDF V ++G  S+ I ++P+++  S +K I+P
Sbjct: 665  GWSDQEIHEAFRRHPLCMTVSEDKVMAIMDFLVKKMGYSSTLIAKQPSILWKSFRKNIVP 724

Query: 632  RGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGT 691
            R    + LLS+GL+  D+ L +LF+ +E  F+         RI                 
Sbjct: 725  RALFARELLSQGLV-NDLKLSVLFDTSEKVFI---------RIT---------------- 784

Query: 692  LLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLK---SLRYLSTSSEN 751
                               SF H R  +  P S      F+ S +K   +LR  S +S  
Sbjct: 785  -------------------SFLHGRQAMACPQS------FNLSMIKKSTTLRCFSNTSNQ 844

Query: 752  VS------------SPESASLASNFVQRKNNEKP--VIMLFENHGFSKSQISEIVKKFPQ 811
             S            +PE AS AS +V  +  E+P  +    ENHGFSK+QI  ++K+ P+
Sbjct: 845  NSFTVSYLMNKCGFTPEFASFASKYVHFETPERPDSLFAFLENHGFSKTQILNLIKRRPR 904

Query: 812  VLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTE 871
            +L    EKTLLPKL FF S G S PE+ K+++ +P VL  SL ++IIP+F+ ++ L +++
Sbjct: 905  LLIYDTEKTLLPKLEFFYSIGFSRPELTKILTSYPAVLICSLKKQIIPSFNLLRNLFQSD 964

Query: 872  EKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKI 931
            +K I  IKR   +  ++ + ++ PN+ +L+ IGVP+SNI  +L +QPR  L + +R K+I
Sbjct: 965  DKAIKTIKRYGAIFVYEFERNLIPNMNVLRGIGVPESNILMLLNHQPRPLLYDQVRLKEI 1024

Query: 932  VEEVKEMGFNPLRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMM 969
            VEEVK MGF+    KF+  V AL +MSKST +KK +VYR+WGW ++EI  AF R+P CM 
Sbjct: 1025 VEEVKRMGFDSSTKKFIDVVIALSSMSKSTLEKKFDVYRRWGWSDQEIHEAFQRYPMCMA 1084

[Close]

BLAST of ClCG05G005950 vs. NCBI nr
Match: KAA0049482.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16162.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 571.2 bits (1471), Expect = 1.7e-158
Identity = 342/641 (53.35%), Postives = 402/641 (62.71%), Query Frame = 0


Query: 226 MYHLFRRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVN 285
           M +LFRRI+ +R PSSVFSHGF   PLKSL++LSTSSEIVSSP+SASLASN         
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSGCPLKSLRFLSTSSEIVSSPKSASLASNAA------- 60

Query: 286 PVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFP 345
            ++    NHGFS+SQIS++ K++ +ILS  P+K L PKLLFFQSKGLSSPE+ KL+   P
Sbjct: 61  -LVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 346 TVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVP 405
            VLT SLN++IIP FDY+QA+L +EEKT+A IK+FAG+L  +LR S  PNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 406 DSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKI 465
           DSNI   L YQPR+ L++SIRFKE+VE V EMGFNP RL+FV+AVFALR+M+KSTWDKK+
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 466 EVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSL 525
           EVYRKWG  EEE  +AF R+P CM  SEDKIN                            
Sbjct: 241 EVYRKWGLSEEEFSIAFRRNPLCMAFSEDKINA--------------------------- 300

Query: 526 KKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKP 585
               LP  S      S  LL     LP+L                               
Sbjct: 301 ---FLPSSSQQGTNTSLFLL-----LPLL------------------------------- 360

Query: 586 HNLTGTLLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTS 645
                TL+                 S    RI+L+R PS VF+ GFSESPLKSLRYLSTS
Sbjct: 361 -----TLM-----------------SNLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTS 420

Query: 646 SENVSSPESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLL 705
           SE VSSP SA LASN VQ KN  K  I L  NHGFS+SQIS++ KK+PQ+LSA PEKTLL
Sbjct: 421 SEIVSSPTSAPLASNAVQLKNKRKDAIALLSNHGFSESQISDLDKKYPQILSANPEKTLL 480

Query: 706 PKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSV 765
           PKLLF +SK                                   +  +EEKT+  IKR  
Sbjct: 481 PKLLFLESK----------------------------------AVFGSEEKTLITIKRFA 511

Query: 766 GLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNP 825
           G+L WDL++SV PNIEILKQIGVPDSNI   L  QPR FLINSIRFK+ VE V EMGFNP
Sbjct: 541 GILVWDLRISVGPNIEILKQIGVPDSNILKYLQRQPRSFLINSIRFKETVERVTEMGFNP 511

Query: 826 LRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAF 867
            ++ FV A+F LR M+KSTWDKK+EVYRKWG  EEEI LAF
Sbjct: 601 QQMLFVFALFGLRGMTKSTWDKKVEVYRKWGLSEEEIRLAF 511

[Close]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-08
Identity = 56/246 (22.76%), Postives = 110/246 (44.72%), Query Frame = 0


Query: 231 RRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVNPVIMF 290
           R++  V   S + + G        L  L  + E + +      A  +  L   + PV+ F
Sbjct: 179 RKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEF 238

Query: 291 FENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTR 350
             + G  KS I  ++ KRPQI       +L P + F ++ G+   + AK+IS FP +LT 
Sbjct: 239 LLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTY 298

Query: 351 SLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNIS 410
           S  +++    +++     TEE+    + R   ++++++ +  RP +E  + + V   +++
Sbjct: 299 S-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV---DVA 358

Query: 411 TILLYQPRVLLVS-SIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYR 470
            +L   P+   +S     K + E   E GF    +  +++    R  +  T+  K  V  
Sbjct: 359 VLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMIS----RYGALYTFSLKENVMP 416

Query: 471 KWGWLE 476
           KW + +
Sbjct: 419 KWDYFQ 416

[Close]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-08
Identity = 56/287 (19.51%), Postives = 126/287 (43.90%), Query Frame = 0


Query: 283 DVNPVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLIS 342
           D+ PV+ + +      + +  ++++ P++L  K E ++   + +    G+   +V  +I+
Sbjct: 170 DLAPVVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVIT 229

Query: 343 VFPTVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQI 402
            FP VL   + + I P  ++++ +          I++   VL + L+   +PNIE L  I
Sbjct: 230 RFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDI 289

Query: 403 GVPDSNISTILLYQPRVL-------LVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRT 462
           GV    +++I++  P VL       LV+     E    V    F  +  +   A+    +
Sbjct: 290 GVRKEALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAI----S 349

Query: 463 MSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIV 522
           + ++   K +      G++  ++       P  +  + D +    ++F N +  +   +V
Sbjct: 350 LGRAAVLKHVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELV 409

Query: 523 RRPALISLSLKKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRF 563
             PA  +  ++  + PR   ++++  KGL     +L  L  C++ +F
Sbjct: 410 EFPAFFTYGIESTVRPR---HEMVSRKGL---TCSLAWLLNCSDAKF 446

[Close]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-08
Identity = 54/287 (18.82%), Postives = 127/287 (44.25%), Query Frame = 0


Query: 670 PVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISVFP 729
           PV+   +      S +  +++++P+VL  K E T+   + +    G++  E+  +++ +P
Sbjct: 217 PVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYP 276

Query: 730 GVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIGVP 789
            +L   + R I P  +Y++ L          I++   +L ++L  +V+PN++IL+   V 
Sbjct: 277 EILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVR 336

Query: 790 DSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRL------KFVLAVFALRAMSKS 849
           ++++ +I+   P +     I  K  ++  +++  + + L        +  +    ++S+S
Sbjct: 337 ETSLPSIIAQYPEII---GIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSES 396

Query: 850 TWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMDFFVNKLGCESSFIARRPA 909
              K I+   K G+  ++        P  +  +   +    ++F  ++      +   PA
Sbjct: 397 PMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPA 456

Query: 910 VISFSLKKRILPRGSVYQVLLSKGLIKKDVNLRLLFECTENCFLDKF 951
             ++ L+  + PR         K +IKK +   L +    NC  +KF
Sbjct: 457 FFTYGLESTVKPR--------HKKIIKKGIKCSLAWML--NCSDEKF 490

[Close]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 9.7e-08
Identity = 55/299 (18.39%), Postives = 123/299 (41.14%), Query Frame = 0


Query: 283 DVNPVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLIS 342
           D+ PV+ + +        +  ++++ P++L  K E ++   + +    G++  +V  +I+
Sbjct: 179 DLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVIT 238

Query: 343 VFPTVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQI 402
            FP VL   + + I P  ++++ +          I++   VL + L +  +PNIE L + 
Sbjct: 239 RFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEF 298

Query: 403 GVPDSNISTILLYQPRVL-------------------LVSSIRFKEIVEEVKEMGFNPLR 462
           GV    ++ I+   P +L                   LVSS  F  ++E + +       
Sbjct: 299 GVRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQ------- 358

Query: 463 LKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFF 522
                      ++ ++   K +      G+L  ++       P  +  + D +    ++F
Sbjct: 359 ---------AISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYF 418

Query: 523 VNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRF 563
            N +  +   +V  PA  +  L+  + PR   ++++  KG      +L  L  C++ +F
Sbjct: 419 QNEMERDLEELVEFPAFFTYGLESTVRPR---HEMVAKKGF---TCSLAWLLNCSDAKF 455

[Close]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-06
Identity = 30/141 (21.28%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 283 DVNPVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLIS 342
           + + ++ FF + GF    I ++++K  Q+  A+ + +           G+   ++  ++S
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 343 VFPTVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQI 402
             P +LT  L+ ++IP  + + +L R   +  +AI +F  +L+ ++     P +   + +
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 403 GVPDSNISTILLYQPRVLLVS 424
           GVP++ +  ++L+ PR++  S
Sbjct: 125 GVPETQLGKMILFNPRLISYS 145

[Close]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL
Match: A0A5A7U0V4 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00670 PE=3 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 2.0e-261
Identity = 490/742 (66.04%), Postives = 568/742 (76.55%), Query Frame = 0


Query: 226 MYHLFRRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVN 285
           MY+LFRR + +RP SSVFSHGF E PLKSL+YLSTSS+IVSSP SA LASN +Q KN   
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRK 60

Query: 286 PVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFP 345
            VI    +HGFS+SQIS+L K+ PQILSA PEKSLLPKLLFFQSKGLSSPE+ KL+  FP
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 346 TVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVP 405
            VLT SL+++IIPAFDYIQA+L +EEKT+A+IK+FAG+L  +LR S  PNIEILKQIGVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 406 DSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKI 465
           DSNI   L YQPRV L++ +RFKE VE V EMGFNP +L+FV+AVF LR M+KSTWDKK+
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 466 EVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSL 525
           EVYRKWG  EEEI LAF RHPW MM SEDKING MDFFVN++GCE+SF  RRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 526 KKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKP 585
           KKRILPRG VYQVLLSKGL+KK  NL + FE +EN F++KFINP+K++IP LL+L     
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL----- 360

Query: 586 HNLTGTLLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTS 645
                                          I+L+R PSSVF+HGFSESPLK LR+LSTS
Sbjct: 361 -------------------------------ILLLRYPSSVFSHGFSESPLKFLRFLSTS 420

Query: 646 SENVSSPESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLL 705
           SE VSSP+SASLASN VQ +NN K           S S               +PEK+LL
Sbjct: 421 SEIVSSPKSASLASNAVQLENNRKA-------EAASNS-------------FCEPEKSLL 480

Query: 706 PKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSV 765
           PKLLF QSKGLSSPE+ K +   P VL  SLN+RII  FDYIQ +L +EEKT+AAIK+  
Sbjct: 481 PKLLFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA 540

Query: 766 GLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNP 825
           G+L  DL++SV PNIEILKQ GVPDSNI   L YQPRVFL +SIRFK+IVE V EMGFNP
Sbjct: 541 GILAQDLRISVGPNIEILKQNGVPDSNILKYLQYQPRVFLTSSIRFKEIVERVAEMGFNP 600

Query: 826 LRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMD 885
            +L+FV+AVFALRAM+KSTWDKK+EVYRKWG  EEEI LAF RHPWCMM SEDKING MD
Sbjct: 601 QQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMVSEDKINGAMD 660

Query: 886 FFVNKLGCESSFIARRPAVISFSLKKRILPRGSVYQVLLSKGLIKKDVNLRLLFECTENC 945
           FFVNK+GCESSF ARRP V+S SLKKRILPRG VYQVLLSKGLIKK  NL L F  +E+ 
Sbjct: 661 FFVNKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHR 686

Query: 946 FLDKFINPYKKQIPGLLKLYEE 968
           F++KFINP+K+QIPGLL+LYE+
Sbjct: 721 FIEKFINPHKEQIPGLLELYEQ 686

[Close]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL
Match: F6HDG2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01630 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 3.5e-178
Identity = 342/719 (47.57%), Postives = 486/719 (67.59%), Query Frame = 0


Query: 267 SPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKL 326
           S + A  AS  ++ +    P  V+ FF +HGFSKSQ S++VK  P++L++ P+K+LLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 327 LFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVL 386
            FF SKG S P+VAK++   P +L RSL  QIIP+F++++  L+++E  I  +KRF+ +L
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 387 TWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRL 446
            ++L      N+  L++ GVP SNI+ +L+Y+P   +V+   F++ +EEVK+MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 447 KFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFV 506
           KFVLA+ A+R   +S W++KI++Y+KWGW EEEIRLAF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 507 NRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLD 566
           N++G ESS I  RP LI LSL+KRI+PR SV QVLLSKGL+ KD++L +LFE TE  FL+
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 567 KFINPYKKRIPRLLKLYEEKPHNLTGTLL---VLSQSPSLPLAGTPPPFSFSHVRIVLVR 626
           +F+N YK+  P+L+KL       + G L    VL    +L  + TP    F    + L  
Sbjct: 367 RFVNAYKEEAPQLIKLM------MIGFLRKAPVLQVRFNLTASPTPQSLHFLLDHLYLFS 426

Query: 627 PPSSVFAHGFSESPLKSLRYLSTSSENVSSPESASLASNFVQRKNNEKP--VIMLFENHG 686
             SS       +    ++ YL  S     S + A  AS +V  +  +KP  V+ LF +HG
Sbjct: 427 SSSSTSISTSEKPHPFTVSYLINSCG--LSHKDARSASKYVHFETPDKPNSVLALFNSHG 486

Query: 687 FSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRR 746
           FSK+Q S+IVKK PQ+L + P+KTLLPKL FF SKG S P++AK++   P +LK SL  +
Sbjct: 487 FSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKRSLENQ 546

Query: 747 IIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIGVPDSNISTILLY 806
           IIP+F++ +  L++++  I  +KR   +L +DL   V  N+  L++ GVP SNI+ +L+ 
Sbjct: 547 IIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMN 606

Query: 807 QPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPE 866
           QP  F++    F++ +EEVK+MG NP ++KFV+A+ A+RA  KS+W++KI++Y++WGW E
Sbjct: 607 QPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKRWGWSE 666

Query: 867 EEILLAFGRHPWCMMASEDKINGVMDFFVNKLGCESSFIARRPAVISFSLKKRILPRGSV 926
           EEI LAF + PWCM+ SEDKI   MDFFVNK+G ESS IARRP +IS SL+KRI+PR SV
Sbjct: 667 EEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSV 726

Query: 927 YQVLLSKGLIKKDVNLRLLFECTENCFLDKFINPYKKQIPGLLKLYEEKGPQWLDDVEQ 979
            QVLLSKGLI KD +L  +F+ TE  FL KF++ YK++ P LL L  E     L+DV +
Sbjct: 727 VQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNL--EHKEMKLNDVAE 775

[Close]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL
Match: A0A5J5WSE7 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A01G027900v1 PE=3 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.1e-176
Identity = 401/1080 (37.13%), Postives = 582/1080 (53.89%), Query Frame = 0


Query: 41   SAKFASLASNSVQLKNNENP--VIMFFENHGFSKSQIFEIVKKFPQVLSAKPEKTIL--- 100
            S + AS AS  V  +  E P  + +F ENHGFSK+QI  ++KK P++L    EKT+L   
Sbjct: 58   STELASFASKYVHFETPERPDSLFVFLENHGFSKTQILNLIKKRPRLLVCDTEKTLLPKI 117

Query: 101  ------------------------------------------------------------ 160
                                                                        
Sbjct: 118  EYLHSLGFSRPELAKILSSYPTLLMHSLKNQIIPNFNLLRNLFHSDDKAIKAIKRFTPIL 177

Query: 161  -------LY----------------------QPRVFLVSSIQFKEIVEEVKEMGFNPLRL 220
                   LY                      QPR  L + ++ KEIVEE K MGF+    
Sbjct: 178  VYDLESYLYPNMNVLSGIGVPESNILVLLNRQPRSLLYNPVRLKEIVEEAKRMGFDSSTK 237

Query: 221  KFVLAVFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFV 280
             F+  V A ++M+KST +KK  VYR+WGW ++EIH AF RHP CM   ED++  +MDF V
Sbjct: 238  MFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEAFRRHPLCMTVSEDKVMAIMDFLV 297

Query: 281  NKIGCESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHG 340
            NK+G  S+ IA++P+++  S +K I+PR    + LLS+ + +  +  V       VF   
Sbjct: 298  NKMGYSSTLIAKQPSILRQSFRKNIVPRALFARELLSQGLVNDLKLSVLFDTSEKVFIRM 357

Query: 341  F-----------------------------------FESPLKSLKYL------------S 400
            F                                   F SP+   K+L            +
Sbjct: 358  FVDRFVNKAPDLLKLYKEKLKISEKKQTLEPVPAVSFTSPILWRKFLILSLGSHKRGCSN 417

Query: 401  TSSEIVS--------SPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELVKKRP 460
             +S  VS        +PE AS AS +V  +    P  +  F ENHG              
Sbjct: 418  QNSFTVSYLMNKCGFTPEFASFASKYVHFETPERPDSLFAFLENHG-------------- 477

Query: 461  QILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRT 520
             +L    EK+LLPKL FF S G S PE+ K+++ +P VL  SL +QIIP+F+ ++ L ++
Sbjct: 478  -LLIYDTEKTLLPKLEFFYSIGFSRPELTKILTSYPAVLICSLKKQIIPSFNLLRNLFQS 537

Query: 521  EEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKE 580
            ++K I  IKR+  +  ++   +  PN+ +L+ IGVP+SNI  +L +QPR LL   +R KE
Sbjct: 538  DDKAIKTIKRYGAIFVYDFERNLIPNMNLLRGIGVPESNILMLLNHQPRPLLYDQVRLKE 597

Query: 581  IVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCM 640
            IVEEVK MGF+    KFV  V AL +MSKST +KK +VYR+WGW ++EI  AF R+P CM
Sbjct: 598  IVEEVKRMGFDSSTKKFVDVVIALSSMSKSTLEKKFDVYRRWGWSDQEIHEAFQRYPMCM 657

Query: 641  MASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDV 700
              SEDKI  VMDF VN++G  S+ I ++ +++  SL+KRI+PR    Q LLS+GL+ KD+
Sbjct: 658  AVSEDKIMAVMDFLVNKMGYSSTLIAKQSSILRQSLEKRIVPRALFAQELLSQGLV-KDL 717

Query: 701  NLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGTLLVLSQSPSLPLAGTPPP 760
             L +LF+ +E  F+         RI  LL   +    + +  L ++  S +L        
Sbjct: 718  KLSVLFDTSEKVFI---------RITSLLHGRQAMASSQSFNLSIIKISSTLRF------ 777

Query: 761  FSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTSSENVSSPESASLASNFVQRKNNEK 820
            FS S               H F+ S L         ++   SPESAS  SN+V  +  EK
Sbjct: 778  FSISSNE------------HSFTVSYL--------INKCGFSPESASRTSNYVHFETPEK 837

Query: 821  P--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQSKGLSSPEVAKLISV 880
            P  +I+  ENHGFSK+QI  ++K+ P++L +  EKTLLPKL F  S G S PE+AKL+S 
Sbjct: 838  PDSLIIFLENHGFSKTQIKNLIKRQPKLLHSDTEKTLLPKLEFLYSIGFSRPELAKLLSD 897

Query: 881  FPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDLQVSVRPNIEILKQIG 940
            +P +L+ SL +RIIP+F+ ++ L ++++K + +IKR  G+L  D + ++ PN+ IL+ IG
Sbjct: 898  YPTLLRASLEKRIIPSFNLLRNLFQSDDKAVKSIKRFAGILVSDFEKNLLPNMNILRGIG 957

Query: 941  VPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWDK 968
            VP++NI   L  +PR  + N +R ++IVEEVK MG +  R KF+  VFA+++M+KST DK
Sbjct: 958  VPETNILLQLHRKPRTLMFNPVRLEEIVEEVKRMGIDTSRKKFLDVVFAMKSMTKSTLDK 1017

[Close]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL
Match: A0A0D2Q720 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G027700 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 1.1e-166
Identity = 384/1095 (35.07%), Postives = 571/1095 (52.15%), Query Frame = 0


Query: 41   SAKFASLASNSVQLKNNENP--VIMFFENHGFSKSQIFEIVKKFPQVLSAKPEKTIL--- 100
            S + AS AS+ V  +  E P  + +F ENHGFS++QI  ++KK P++L    EKT+L   
Sbjct: 58   STELASRASSYVHFETPEKPDSLFVFLENHGFSRTQILNLIKKRPRLLVCDTEKTLLPKI 117

Query: 101  ------------------------------------------------------------ 160
                                                                        
Sbjct: 118  EYLHSLGFSRPELAKILSSYPTLLMHSLKNQIIPNFNLLRNLFHSDDKAIKAIKRFTPIL 177

Query: 161  -------LY----------------------QPRVFLVSSIQFKEIVEEVKEMGFNPLRL 220
                   LY                      QPR  L + ++ KEIVEE + MGF+P   
Sbjct: 178  VYDLESYLYPNMNVLRVIGVPESNILVLLNRQPRSLLYNPVRLKEIVEEAERMGFDPSTK 237

Query: 221  KFVLAVFAPRTMSKSTWDKKIGVYRKWGWLEEEIHLAFGRHPWCMMAFEDEINGVMDFFV 280
             F+  V A ++M+KST +KK  VYR+WGW ++EIH A  RHP CM   ED++  +MDF V
Sbjct: 238  MFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEALRRHPLCMTVSEDKVMAIMDFLV 297

Query: 281  NKIGCESSFIARRPTLISLSLKKRILPRGSIYQVLLSKVMYHLFRRIVFVRPPSSVFSHG 340
             K+G  S+ IA++P+++  S +K I+PR    + LLS+ + +  +  V       VF   
Sbjct: 298  KKMGYSSTLIAKQPSILRKSFRKNIIPRALFARELLSQGLVNDLKLSVLFDTSEKVFIRM 357

Query: 341  F-----------------------------------FESPLKSLKYL------------- 400
            F                                   F SP+   K+L             
Sbjct: 358  FVDRFVNKAPELLKLYKEKLKISEKKQTLEPVPAVSFSSPILWGKFLILSLGSHKRGCSN 417

Query: 401  ---STSSEIVS----SPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELVKKRP 460
                T S +++    S E AS AS++V  +    P  +  F ENHG              
Sbjct: 418  GHSFTVSYLINKCGFSTELASRASSYVHFETPEKPDSLFAFLENHG-------------- 477

Query: 461  QILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQALLRT 520
             +L    EK+LLPK+ +  S G S P++AK++S +P++L RSL  QIIP F+ ++ L  +
Sbjct: 478  -LLVCDTEKTLLPKIEYLHSLGFSRPKLAKILSSYPSLLMRSLKNQIIPNFNLLRNLFHS 537

Query: 521  EEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSIRFKE 580
            ++K I  IKR+  +L ++L +   PN+ +L+ IGVP+SNI  +L  QPR LL + +R KE
Sbjct: 538  DDKAIKVIKRYTPILVYDLESYLYPNMNVLRGIGVPESNILVLLNRQPRSLLYNPVRLKE 597

Query: 581  IVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKIEVYRKWGWLEEEIRLAFGRHPWCM 640
            IVEE + MGF+P    F+  V AL++M+KST +KK +VYR+WGW ++EI  AF RHP CM
Sbjct: 598  IVEEAERMGFDPSTKMFLSVVIALKSMTKSTLEKKFDVYRRWGWSDQEIHEAFRRHPLCM 657

Query: 641  MASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGLLKKDV 700
              SEDK+  +MDF V ++G  S+ I ++P+++  S +K I+PR    + LLS+GL+  D+
Sbjct: 658  TVSEDKVMAIMDFLVKKLGYSSTLIAKQPSILWKSFRKNIVPRALFARELLSQGLV-NDL 717

Query: 701  NLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKPHNLTGTLLVLSQSPSLPLAGTPPP 760
             L +LF+ +E  F+         RI                                   
Sbjct: 718  KLSVLFDTSEKVFI---------RIT---------------------------------- 777

Query: 761  FSFSHVRIVLVRPPSSVFAHGFSESPLK---SLRYLSTSSENVS------------SPES 820
             SF H R  +  P S      F+ S +K   +LR+ S +S   S            +PE 
Sbjct: 778  -SFLHGRQAMACPQS------FNLSMIKKSTTLRFFSKTSNQNSFTVSYLMNKCGFTPEF 837

Query: 821  ASLASNFVQRKNNEKP--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQ 880
            AS AS +V  +  E+P  +    ENHGFSK+QI  ++K+ P++L    EKTLLPKL FF 
Sbjct: 838  ASFASKYVHFETPERPDSLFAFLENHGFSKTQILNLIKRRPRLLIYDTEKTLLPKLEFFY 897

Query: 881  SKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDL 940
            S G S PE+ K+++ +P VL  SL ++IIP+F+ ++ L ++++K I  IKR   +  ++ 
Sbjct: 898  SIGFSRPELTKILTSYPAVLICSLKKQIIPSFNLLRNLFQSDDKAIKTIKRYGAIFVYEF 957

Query: 941  QVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVL 968
            + ++ PN+ +L+ IGVP+SNI  +L +QPR  L + +R K+IVEEVK MGF+    KF+ 
Sbjct: 958  ERNLIPNMNVLRGIGVPESNILMLLNHQPRPLLYDQVRLKEIVEEVKRMGFDSSTKKFID 1017

[Close]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL
Match: A0A5A7U135 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00900 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 8.2e-159
Identity = 342/641 (53.35%), Postives = 402/641 (62.71%), Query Frame = 0


Query: 226 MYHLFRRIVFVRPPSSVFSHGFFESPLKSLKYLSTSSEIVSSPESASLASNFVQLKNDVN 285
           M +LFRRI+ +R PSSVFSHGF   PLKSL++LSTSSEIVSSP+SASLASN         
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSGCPLKSLRFLSTSSEIVSSPKSASLASNAA------- 60

Query: 286 PVIMFFENHGFSKSQISELVKKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFP 345
            ++    NHGFS+SQIS++ K++ +ILS  P+K L PKLLFFQSKGLSSPE+ KL+   P
Sbjct: 61  -LVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 346 TVLTRSLNRQIIPAFDYIQALLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVP 405
            VLT SLN++IIP FDY+QA+L +EEKT+A IK+FAG+L  +LR S  PNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 406 DSNISTILLYQPRVLLVSSIRFKEIVEEVKEMGFNPLRLKFVLAVFALRTMSKSTWDKKI 465
           DSNI   L YQPR+ L++SIRFKE+VE V EMGFNP RL+FV+AVFALR+M+KSTWDKK+
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 466 EVYRKWGWLEEEIRLAFGRHPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSL 525
           EVYRKWG  EEE  +AF R+P CM  SEDKIN                            
Sbjct: 241 EVYRKWGLSEEEFSIAFRRNPLCMAFSEDKINA--------------------------- 300

Query: 526 KKRILPRGSVYQVLLSKGLLKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLYEEKP 585
               LP  S      S  LL     LP+L                               
Sbjct: 301 ---FLPSSSQQGTNTSLFLL-----LPLL------------------------------- 360

Query: 586 HNLTGTLLVLSQSPSLPLAGTPPPFSFSHVRIVLVRPPSSVFAHGFSESPLKSLRYLSTS 645
                TL+                 S    RI+L+R PS VF+ GFSESPLKSLRYLSTS
Sbjct: 361 -----TLM-----------------SNLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTS 420

Query: 646 SENVSSPESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLL 705
           SE VSSP SA LASN VQ KN  K  I L  NHGFS+SQIS++ KK+PQ+LSA PEKTLL
Sbjct: 421 SEIVSSPTSAPLASNAVQLKNKRKDAIALLSNHGFSESQISDLDKKYPQILSANPEKTLL 480

Query: 706 PKLLFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSV 765
           PKLLF +SK                                   +  +EEKT+  IKR  
Sbjct: 481 PKLLFLESK----------------------------------AVFGSEEKTLITIKRFA 511

Query: 766 GLLTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNP 825
           G+L WDL++SV PNIEILKQIGVPDSNI   L  QPR FLINSIRFK+ VE V EMGFNP
Sbjct: 541 GILVWDLRISVGPNIEILKQIGVPDSNILKYLQRQPRSFLINSIRFKETVERVTEMGFNP 511

Query: 826 LRLKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAF 867
            ++ FV A+F LR M+KSTWDKK+EVYRKWG  EEEI LAF
Sbjct: 601 QQMLFVFALFGLRGMTKSTWDKKVEVYRKWGLSEEEIRLAF 511

[Close]

BLAST of ClCG05G005950 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 250.8 bits (639), Expect = 4.7e-66
Identity = 149/397 (37.53%), Postives = 237/397 (59.70%), Query Frame = 0


Query: 196 IARRPTLISLSLKKRILPRGSIYQVLLS---KVMYHLFRRIVFVRPPSSVFSHGFFESPL 255
           I +  +L +L    +++PRGS   +L     K ++    +  F  P +++ S    +   
Sbjct: 5   IPQATSLTNLVFLTKLIPRGSFTTILPKHHRKPIFVFSLQTQFSSPVTTLTSKNPKDDEQ 64

Query: 256 K-----SLKYLSTSSEIVSSPESASLASNFVQLKNDVNP--VIMFFENHGFSKSQISELV 315
           +     +L YL  S  +  SP+SA++AS  + L +   P  V+    +HGF+ +QIS LV
Sbjct: 65  QQKLSFTLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLV 124

Query: 316 KKRPQILSAKPEKSLLPKLLFFQSKGLSSPEVAKLISVFPTVLTRSLNRQIIPAFDYIQA 375
           KKRP +L A  E  LLPKL FF S G+S   +A+ ++  PT+LTRSL  Q+IP+++++++
Sbjct: 125 KKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKS 184

Query: 376 LLRTEEKTIAAIKRFAGVLTWNLRNSTRPNIEILKQIGVPDSNISTILLYQPRVLLVSSI 435
           +L ++EK +AA++R   V   +   +  PNI  + + GVP+  I  +L + P  ++  + 
Sbjct: 185 VLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNH 244

Query: 436 RFKEIVEEVKEMGFNPLRLKFVLAVFALRTM-SKSTWDKKIEVYRKWGWLEEEIRLAFGR 495
            F+ I ++ +EMGFNP +  FVLA+ AL    +KS WDK  EVY++WGW E++I  AF +
Sbjct: 245 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 304

Query: 496 HPWCMMASEDKINGVMDFFVNRIGCESSFIVRRPALISLSLKKRILPRGSVYQVLLSKGL 555
           HP CMM SE KIN  M++FVN +      I + P ++  SL+KRI+PR SV +VL+S GL
Sbjct: 305 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 364

Query: 556 LKKDVNLPMLFECTENRFLDKFINPYKKRIPRLLKLY 582
           +K+D +L  L    E  FL+K +  Y++ +P L+ LY
Sbjct: 365 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of ClCG05G005950 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 223.4 bits (568), Expect = 8.1e-58
Identity = 114/316 (36.08%), Postives = 194/316 (61.39%), Query Frame = 0


Query: 651 SPESASLASNFVQRKNNEKP--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKL 710
           S ESA   S FV+  +++KP  V+ LF++HGF+  QI+ ++K FP+VLS  PE  + PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 711 LFFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLL 770
           +FF S G S+ + AK+IS  P +L  SL++R+IP +D ++++L  EE  +  +KR +   
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 771 TWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRL 830
           +  +   V   + I +++GVPD +I  ++   P  F     RF +++  V   GF+P + 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 831 KFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMDFFV 890
            FV A+ A    S+S  ++K ++++ +GW +E+ + A  R P C+  S++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 891 NKLGCESSFIARRPAVISFSLKKRILPRGSVYQVLLSKGLIKK-DVNLRLLFECTENCFL 950
           N +G ++  I  RP V+S S++KRI PR  V  +LLSKGL+KK D+N   + +   + F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 951 DKFINPYKKQIPGLLK 964
           DKF+  Y+ ++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of ClCG05G005950 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-40
Identity = 94/315 (29.84%), Postives = 180/315 (57.14%), Query Frame = 0


Query: 652 PESASLASNFVQRKNNEKP--VIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLL 711
           P + ++A  +   K+ E+P  VI + +++ FS +QI + ++  P+++    EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 712 FFQSKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVG--L 771
           FF+  G +   + K +S    V+  SL +++IP  + +++++  + + +  I    G  L
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 772 LTWDLQVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLR 831
           L+ D  + + PNI  L+  G+  S ++++L  QPR+F ++  + +  V    ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 832 LKFVLAVFALRAMSKSTWDKKIEVYRKWGWPEEEILLAFGRHPWCMMASEDKINGVMDFF 891
              V AV +L ++S+ T+D+K++++   G+ E+EI     R P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 892 VNKLGCESSFIARRPAVISFSLKKRILPRGSVYQVLLSKGLI----KKDVNLRLLFECTE 951
           + ++G E   +A+RP V+S++L+KR++PR  V Q+L  KGL+    KK  N+  + E TE
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 952 NCFLDKFINPYKKQI 959
             FL+K++  +  +I
Sbjct: 353 EAFLEKYVVRFGDEI 367

[Close]

BLAST of ClCG05G005950 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-36
Identity = 105/351 (29.91%), Postives = 190/351 (54.13%), Query Frame = 0


Query: 653 ESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQ 712
           ES S   +F + KNN   V+ L  +HGF+ SQIS I++ +PQ+L A  EK+L PKL F Q
Sbjct: 70  ESISRKVSF-EDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQ 129

Query: 713 SKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDL 772
           S+G SS E+ +++S  P +L    ++ I   +D+I+  L   EK+    K    L   +L
Sbjct: 130 SRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLL--EKSSKNEKLCHSLPQGNL 189

Query: 773 QVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVL 832
           +  +R N+ +L+++G+P   + ++L+   +  +    +F++ +++V EMGF+P   KFV 
Sbjct: 190 ENKIR-NVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKKVVEMGFDPTTSKFVE 249

Query: 833 AVFALRAMSKSTWDKKIEVYRKWG------------WP------EEEIL--------LAF 892
           A+  +  M++ T ++K+ +Y+  G            WP      E+++L        L F
Sbjct: 250 ALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGF 309

Query: 893 GR---------HPWCMMASEDKINGVMDFFVNKLGCESSFIARRPAVISFSLKKRILPRG 952
            R          P C+  S + +    +F V K+      +   PAV  +SL+KRI+PRG
Sbjct: 310 SRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRG 369

Query: 953 SVYQVLLSKGLIKKDV-NLRLLFECTENCFLDKFINPY--KKQIPGLLKLY 966
           +V + L+SKGL++ ++ ++  +  CT+  FL++++  +  K+ +  L+ +Y
Sbjct: 370 NVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

BLAST of ClCG05G005950 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-36
Identity = 105/351 (29.91%), Postives = 190/351 (54.13%), Query Frame = 0


Query: 653 ESASLASNFVQRKNNEKPVIMLFENHGFSKSQISEIVKKFPQVLSAKPEKTLLPKLLFFQ 712
           ES S   +F + KNN   V+ L  +HGF+ SQIS I++ +PQ+L A  EK+L PKL F Q
Sbjct: 70  ESISRKVSF-EDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQ 129

Query: 713 SKGLSSPEVAKLISVFPGVLKPSLNRRIIPAFDYIQTLLRTEEKTIAAIKRSVGLLTWDL 772
           S+G SS E+ +++S  P +L    ++ I   +D+I+  L   EK+    K    L   +L
Sbjct: 130 SRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLL--EKSSKNEKLCHSLPQGNL 189

Query: 773 QVSVRPNIEILKQIGVPDSNISTILLYQPRVFLINSIRFKKIVEEVKEMGFNPLRLKFVL 832
           +  +R N+ +L+++G+P   + ++L+   +  +    +F++ +++V EMGF+P   KFV 
Sbjct: 190 ENKIR-NVSVLRELGMPHKLLFSLLISDSQP-VCGKEKFEETLKKVVEMGFDPTTSKFVE 249

Query: 833 AVFALRAMSKSTWDKKIEVYRKWG------------WP------EEEIL--------LAF 892
           A+  +  M++ T ++K+ +Y+  G            WP      E+++L        L F
Sbjct: 250 ALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGF 309

Query: 893 GR---------HPWCMMASEDKINGVMDFFVNKLGCESSFIARRPAVISFSLKKRILPRG 952
            R          P C+  S + +    +F V K+      +   PAV  +SL+KRI+PRG
Sbjct: 310 SRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRG 369

Query: 953 SVYQVLLSKGLIKKDV-NLRLLFECTENCFLDKFINPY--KKQIPGLLKLY 966
           +V + L+SKGL++ ++ ++  +  CT+  FL++++  +  K+ +  L+ +Y
Sbjct: 370 NVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

The following BLAST results are available for this feature:

BLAST of ClCG05G005950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049463.1	4.0e-261	66.04	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 tr...	[more]
KAB2095310.1	2.4e-176	37.13	hypothetical protein ES319_A01G027900v1, partial [Gossypium barbadense]	[more]
KJB12621.1	2.2e-166	35.07	hypothetical protein B456_002G027700 [Gossypium raimondii]	[more]
KAG4160852.1	3.9e-163	35.77	hypothetical protein ERO13_D01G023463v2 [Gossypium hirsutum]	[more]
KAA0049482.1	1.7e-158	53.35	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16162.1 tr...	[more]

BLAST of ClCG05G005950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.2e-08	22.76	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	1.5e-08	19.51	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9ZT96	2.6e-08	18.82	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	9.7e-08	18.39	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
Q9SZL6	1.1e-06	21.28	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of ClCG05G005950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0V4	2.0e-261	66.04	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
F6HDG2	3.5e-178	47.57	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01630 PE=3 SV=...	[more]
A0A5J5WSE7	1.1e-176	37.13	Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A01G...	[more]
A0A0D2Q720	1.1e-166	35.07	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G027700 PE=3 ...	[more]
A0A5A7U135	8.2e-159	53.35	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of ClCG05G005950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.7e-66	37.53	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	8.1e-58	36.08	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.6e-40	29.84	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.3e-36	29.91	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	2.3e-36	29.91	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 338..369 e-value: 3.6 score: 16.6 coord: 758..789 e-value: 680.0 score: 5.2 coord: 895..929 e-value: 0.51 score: 19.4 coord: 686..717 e-value: 2.2E-5 score: 33.9 coord: 511..545 e-value: 0.16 score: 21.1 coord: 794..824 e-value: 120.0 score: 11.0 coord: 863..894 e-value: 1.8 score: 17.6 coord: 722..753 e-value: 63.0 score: 12.4 coord: 161..192 e-value: 190.0 score: 9.6 coord: 302..333 e-value: 2.1E-4 score: 30.6 coord: 479..510 e-value: 0.94 score: 18.5 coord: 193..228 e-value: 220.0 score: 9.1 coord: 76..122 e-value: 19.0 score: 14.2 coord: 410..440 e-value: 56.0 score: 12.6 coord: 374..405 e-value: 120.0 score: 11.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 674..825 e-value: 8.4E-21 score: 74.2 coord: 840..946 e-value: 1.8E-12 score: 46.9 coord: 456..563 e-value: 2.3E-13 score: 49.8 coord: 96..226 e-value: 2.7E-7 score: 29.8 coord: 289..442 e-value: 2.1E-23 score: 82.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 94..235 coord: 650..970 coord: 40..95
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 263..586
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 735..958 e-value: 1.4E-45 score: 157.6 coord: 368..579 e-value: 4.2E-43 score: 149.4 coord: 36..234 e-value: 1.5E-30 score: 108.2
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 94..235 coord: 40..95
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 263..586
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 650..970

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G005950.2	ClCG05G005950.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding