ClCG05G004378 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G004378
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-H2 finger protein ATL16
Location	CG_Chr05: 4088274 .. 4089251 (+)
RNA-Seq Expression	ClCG05G004378
Synteny	ClCG05G004378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTTCACCAAAATCAAAACTTCCCAACATATTCCTCCATTTCCTCCCCCAAATCTCCCAAATCCATCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGCCACTGCCTTCTTGCTCCTCAGCTACTATATCTTCGTCATCAACTGTTGCCTCAACTGGCATCGCATCGATCTCCTCCGCCGCCTCTCCCCCTCCTCCACGCGGCGCCTCCCGTCTCCGACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTGGACGAATCTGTAATTAGATCAATCCCTTTACTGCAATACAAGAAATCAACGGCGAAAGAAGAAACCTCATCTGAATGCGCCGTTTGTTTGAGCGAATTTGAAGAGGATGAGACGGTTCGAATTATTCCCATTTGTTCACATCTATTTCACATCGATTGCATCGACATTTGGCTGCAAAATAATCCCAATTGCCCACTCTGTAGAACCAGCATTTCCAGTTCTGCTCTGTTTCATCGATTTCCTCTGCCGAACTCCTTGCCGGAGGATCCAATCGGCGGCGGGAGTGAAAGGGATTTCGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAGGGGAATTGCCGGCGGGGAAATCGGAACAGGGGAAAAAACGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAATGAAAGATGAGCAATTTTGCATTCAACCCATTAGACGCTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTGGCGGTGCAGGCGGCGCTGCAGCAGAGCCGCCGTGGAAGTGCGGTTAGTCCCGGCGGCGATGGGTGTAATGGGAGAGGGAGGAGGTCTTTATTTTCTTTTGGAAATGGGAGGAGTTGTAGAAATGCTGTTCAAGTTCAACCACTTCGTTTGGAAGAGAATTAA

mRNA sequence

ATGGATTTCTTCACCAAAATCAAAACTTCCCAACATATTCCTCCATTTCCTCCCCCAAATCTCCCAAATCCATCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGCCACTGCCTTCTTGCTCCTCAGCTACTATATCTTCGTCATCAACTGTTGCCTCAACTGGCATCGCATCGATCTCCTCCGCCGCCTCTCCCCCTCCTCCACGCGGCGCCTCCCGTCTCCGACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTGGACGAATCTGTAATTAGATCAATCCCTTTACTGCAATACAAGAAATCAACGGCGAAAGAAGAAACCTCATCTGAATGCGCCGTTTGTTTGAGCGAATTTGAAGAGGATGAGACGGTTCGAATTATTCCCATTTGTTCACATCTATTTCACATCGATTGCATCGACATTTGGCTGCAAAATAATCCCAATTGCCCACTCTGTAGAACCAGCATTTCCAGTTCTGCTCTGTTTCATCGATTTCCTCTGCCGAACTCCTTGCCGGAGGATCCAATCGGCGGCGGGAGTGAAAGGGATTTCGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAGGGGAATTGCCGGCGGGGAAATCGGAACAGGGGAAAAAACGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAATGAAAGATGAGCAATTTTGCATTCAACCCATTAGACGCTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTGGCGGTGCAGGCGGCGCTGCAGCAGAGCCGCCGTGGAAGTGCGGTTAGTCCCGGCGGCGATGGGTGTAATGGGAGAGGGAGGAGGTCTTTATTTTCTTTTGGAAATGGGAGGAGTTGTAGAAATGCTGTTCAAGTTCAACCACTTCGTTTGGAAGAGAATTAA

Coding sequence (CDS)

ATGGATTTCTTCACCAAAATCAAAACTTCCCAACATATTCCTCCATTTCCTCCCCCAAATCTCCCAAATCCATCCCATTCCAGCTTCCCCATTATCGCCATTGCCATTATTGGAATTCTCGCCACTGCCTTCTTGCTCCTCAGCTACTATATCTTCGTCATCAACTGTTGCCTCAACTGGCATCGCATCGATCTCCTCCGCCGCCTCTCCCCCTCCTCCACGCGGCGCCTCCCGTCTCCGACTGCCTACTCTCCGGCCCTCGAGACTCGGGGTCTGGACGAATCTGTAATTAGATCAATCCCTTTACTGCAATACAAGAAATCAACGGCGAAAGAAGAAACCTCATCTGAATGCGCCGTTTGTTTGAGCGAATTTGAAGAGGATGAGACGGTTCGAATTATTCCCATTTGTTCACATCTATTTCACATCGATTGCATCGACATTTGGCTGCAAAATAATCCCAATTGCCCACTCTGTAGAACCAGCATTTCCAGTTCTGCTCTGTTTCATCGATTTCCTCTGCCGAACTCCTTGCCGGAGGATCCAATCGGCGGCGGGAGTGAAAGGGATTTCGTAGTGATTGAATTGGGTGGAATTAGAAACGACCCATCTGGCCAATTTTCACAAGAGCGGGCGAATTCAGGGGAATTGCCGGCGGGGAAATCGGAACAGGGGAAAAAACGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAATGAAAGATGAGCAATTTTGCATTCAACCCATTAGACGCTCGGTTTCGATGGACTCGTCGGCGGAACGGCAGATGTATCTGGCGGTGCAGGCGGCGCTGCAGCAGAGCCGCCGTGGAAGTGCGGTTAGTCCCGGCGGCGATGGGTGTAATGGGAGAGGGAGGAGGTCTTTATTTTCTTTTGGAAATGGGAGGAGTTGTAGAAATGCTGTTCAAGTTCAACCACTTCGTTTGGAAGAGAATTAA

Protein sequence

MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPEDPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDEWIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRRSLFSFGNGRSCRNAVQVQPLRLEEN

Homology

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BLAST of ClCG05G004378 vs. NCBI nr
Match: XP_038877360.1 (RING-H2 finger protein ATL16 [Benincasa hispida])

HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171
Identity = 304/325 (93.54%), Postives = 314/325 (96.62%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKI+TSQHIPPFPPPNLPNPSHSSFPII IAIIGILATA LLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIRTSQHIPPFPPPNLPNPSHSSFPIIVIAIIGILATALLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HRIDLLRRLSPSSTRRLPSPTAYSPA+E RGLD+SVIRSIPLLQYKKS  KE+TSSECAV
Sbjct: 61  HRIDLLRRLSPSSTRRLPSPTAYSPAIENRGLDDSVIRSIPLLQYKKSVPKEKTSSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP+S PE
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPIGGG ERDFVVIELGG RNDPSGQFSQ+RA+SGELPAGK EQGKKRRKLQKVTSLGDE
Sbjct: 181 DPIGGGGERDFVVIELGGNRNDPSGQFSQDRASSGELPAGKLEQGKKRRKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR
Sbjct: 241 WIDTRQKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCRNAVQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRNAVQVQPVRLEEN 325

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BLAST of ClCG05G004378 vs. NCBI nr
Match: XP_008438538.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0049260.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK17297.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 4.1e-162
Identity = 295/325 (90.77%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKIKTSQHIPPFPP   PNPSHSSFPIIAIAIIGIL TAFLLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPP---PNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HR DL+RRLSPSSTRRLPSPTAYSPA ETRGLDESVIRSIPLL YKKS   E+T SECAV
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSS LFHRFPLP+S PE
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPIG G ERDFVVIELGGIRNDPSGQFSQERANS ELPA K EQGKK +KLQKVTSLGDE
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQF IQPIRRSVSMDSSAERQMYLAVQAALQQSRRGS VSPGGDGCNGRGRR
Sbjct: 241 WIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCR++VQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRSSVQVQPVRLEEN 322

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BLAST of ClCG05G004378 vs. NCBI nr
Match: XP_004134414.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 563.9 bits (1452), Expect = 8.9e-157
Identity = 285/325 (87.69%), Postives = 297/325 (91.38%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKIKTSQHIPPFPP   PNPSHSSFPIIAIAIIGIL TAFLLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPP---PNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HR DL+RRLSPSSTR LPSPTAYSPAL TRGLDESVIRSIPLL Y KS    +TSSECAV
Sbjct: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF+E ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFH FPLP+S PE
Sbjct: 121 CLSEFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPI   +ERDF+VIELGGIRN PSGQFSQERANS ELPA K EQGKK +KLQKVTSLGDE
Sbjct: 181 DPIAAATERDFLVIELGGIRNHPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQFCIQPIRRSVSMDSSAERQMY+AVQAALQQSR G+ VSPGGDGCNGRGRR
Sbjct: 241 WIDTREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCRNAVQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRNAVQVQPVRLEEN 322

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BLAST of ClCG05G004378 vs. NCBI nr
Match: XP_022975064.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 5.4e-146
Identity = 267/327 (81.65%), Postives = 291/327 (88.99%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPN  +   +SFPIIAIAIIGILATAFLLLSYY+FVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HRIDLLRRLS SS RR P+P  +SP ++TRGLDESVIRSIPL+QYK S A+ +TSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSSALFHRFPLP S P 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPA--GKSEQGKKRRKLQKVTSLG 240
           +PIGGG+ERDFVVIELGGIRNDPSGQ SQER NSGE PA  GK EQGKKR KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300
           DEWIDTR KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPLRLEEN 326
           RRSLFSFGNG SCRN V+VQ +RLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

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BLAST of ClCG05G004378 vs. NCBI nr
Match: XP_022942390.1 (RING-H2 finger protein ATL16 [Cucurbita moschata])

HSP 1 Score: 522.3 bits (1344), Expect = 3.0e-144
Identity = 265/327 (81.04%), Postives = 287/327 (87.77%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           M+ F ++K+S ++PPFPPP   +   +SFPIIAIAIIGILATAFLLLSYY+FVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HRIDLLRRLS SS RR P PT +SP + TRGLDESVIRSIPL+QYK S A+ +TSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP S P 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELP--AGKSEQGKKRRKLQKVTSLG 240
           DPIGGG+ERDFVVIELGGIRNDPSGQ SQER NSGE P  AGK EQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300
           DEWIDTR KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPLRLEEN 326
           RRSLFSFGNG SCRN V+VQ +RLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

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BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.7e-74
Identity = 180/360 (50.00%), Postives = 233/360 (64.72%), Query Frame = 0


Query: 14  PPFPPP--NLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRLSP 73
           PP PPP  +  + + +SFPI+A+A+IGILATAFLL+SYY+FVI CCLNWHRID+L R S 
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 74  SSTRRLPSP--TAYSPALETRGLDESVIRSIPLLQYKK-------------STAKEETSS 133
           S  RR        YSP L +RGLDESVIR+IP+ ++KK                +E+ S 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 134 ECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALF--HRFPL 193
           EC+VCLSEF+++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F   R   
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

Query: 194 PNSLPEDPIGGGSERDFVVIELGGI----RNDP-SGQF--SQERANSGEL---------- 253
           P++ PE+ +    E ++VVIELG      R+ P  G+    QER+NSG L          
Sbjct: 197 PSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSIS 256

Query: 254 PAGKS-EQG---KKRRKLQKVTSLGDEWIDTRM-KDEQF-CIQPIRRSVSMDSSAERQMY 313
           P+ K  ++G   +K RKL K+TS+GDE ID R  KDEQF  IQPIRRS+SMDSSA+RQ+Y
Sbjct: 257 PSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLY 316

Query: 314 LAVQAALQQSRRGSAVSPGGDGC--------NGRGRRSLFSFGNGRSCRNAVQVQPLRLE 324
           LAVQ A++++R    V  GG GC        N + +RS FSFG+ R  R++ ++ PL  E
Sbjct: 317 LAVQEAIRKNREVLVVGDGG-GCSSSSGNVSNSKVKRSFFSFGSSRRSRSSSKL-PLYFE 374

[Close]

BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.4e-66
Identity = 172/369 (46.61%), Postives = 213/369 (57.72%), Query Frame = 0


Query: 14  PPFPPPN-------LPNPSHS--SFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRID 73
           PP PPP+        P  S S  +FPI+AIA+IGILATAFLL+SYYIFVI CCLNWH+ID
Sbjct: 17  PPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQID 76

Query: 74  LLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTA------KEETSSEC 133
           + RR   SS +       YSP    RGLDES IR+IP+ ++KK         + + S EC
Sbjct: 77  IFRRRRRSSDQN--PLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQEC 136

Query: 134 AVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALF--------- 193
           +VCL+EF+EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRTS+S  A F         
Sbjct: 137 SVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPS 196

Query: 194 -HRFPLPNSLPEDPIGG---GSERDFVVIELGGIRNDPSGQF-------SQERANSGELP 253
             R   P+S   +   G   G + DFVVIELG    +             QER  S E+ 
Sbjct: 197 SPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVS 256

Query: 254 AGKSEQG--------------KKRRKLQKVTSLGDEWIDTRMKDEQFC-IQPIRRSVSMD 313
            G S +               KK RK  KVTS+GDE IDTR KD  F  IQPIRRS+SMD
Sbjct: 257 TGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMD 316

Query: 314 SSAERQMYLAVQAALQQSRRGSAVSPGGDG----CNGRG-----RRSLFSFGNGRSCRNA 324
           SS +RQ+YLAVQ  +  SRR   +   GDG     +G G     +R  FSFG+ R+ +++
Sbjct: 317 SSVDRQLYLAVQEEI--SRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSS 376

[Close]

BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 7.8e-23
Identity = 88/249 (35.34%), Postives = 124/249 (49.80%), Query Frame = 0


Query: 16  FPPP------NLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRL 75
           FPPP      +  + S S F  + IA+IGILA+AF+L+SYY  +   C   HR    RR 
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HR----RRH 96

Query: 76  SPSST-----RRLPSPTAYSPALETR-----------------GLDESVIRSIPLLQYKK 135
           + SST      R+ S   +                        GLDES+I+SI + +Y+K
Sbjct: 97  NSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK 156

Query: 136 STAKEETSSECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSA 195
                E SS+C+VCLSEF+E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 MDGFVE-SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 216

Query: 196 LFHRFPLPNS---LPEDPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELP----AG 230
                 L N       + I  G   D VV+    + N  S     E  N G  P      
Sbjct: 217 AVEIVDLTNQQIVTENNSISTGD--DSVVVVNLDLENSRS---RNETVNEGSTPKPPEMQ 272

[Close]

BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.3e-21
Identity = 80/266 (30.08%), Postives = 128/266 (48.12%), Query Frame = 0


Query: 15  PFPPPNL-----PNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRL 74
           P PPP+       + S SSF  + IA+IGIL +A +L+SYY  +   C   H+      L
Sbjct: 35  PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETL 94

Query: 75  SPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAVCLSEFEEDE 134
           + +        +    +    GL+ES+I+SI + +YK      +  S+C+VCLSEFEE+E
Sbjct: 95  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD-GSDCSVCLSEFEENE 154

Query: 135 TVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPEDPIGGGSER 194
           ++R++P C+H FH+ CID WL+++ NCPLCR  ++                +P     + 
Sbjct: 155 SLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG-------------VNNPTASVGQN 214

Query: 195 DFVVI-----------ELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLG 254
             VV+            +  I  + +G  SQ       +     E G +    +    L 
Sbjct: 215 VSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLP 274

Query: 255 DEWIDTRMKDEQFCIQPIRRSVSMDS 265
           +E  +T+ +D      PIRRSVS++S
Sbjct: 275 EERRETKDEDS----LPIRRSVSLNS 282

[Close]

BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 8.1e-20
Identity = 90/323 (27.86%), Postives = 147/323 (45.51%), Query Frame = 0


Query: 14  PPFPPPNLPNPS--HSSFPI---IAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLR- 73
           PP PP ++   S   SS P+   + IAIIG+LA+AFLL+SYY F+   C     +  LR 
Sbjct: 35  PPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYC---GTVSSLRG 94

Query: 74  --------------------RLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKK 133
                               R     +R   S     P+    GLDE++I  I + +Y++
Sbjct: 95  RVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPS----GLDETLINKITVCKYRR 154

Query: 134 STAKEETSSECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSA 193
                 T ++C+VCL EF + E++R++P CSH FH  CID WL+++ NCPLCR +I+   
Sbjct: 155 GDGFVHT-TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT 214

Query: 194 LFHRFPLPNSLPEDPIGGGSERDFVVIELGGIRN-DPSGQFSQERANSGELPAGKSEQGK 253
           +    P P        GG +  + VV+ + G+ N     Q +  RA++ +      +  +
Sbjct: 215 VGLASPEPEGCAPGETGGDNTHEVVVV-MDGLENLCEEQQEAVSRASTADDDHDAKDVAE 274

Query: 254 KRRKLQKVTSLGDEWIDTRM--------KDEQFCIQPIRRSVSMDSSAERQMYLAVQAAL 302
              +      + +E    +         +D + CI  +     +  S E ++  A ++ L
Sbjct: 275 GMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADV-----LQESMEDELTAARESGL 334

[Close]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL
Match: A0A5D3D010 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001510 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 295/325 (90.77%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKIKTSQHIPPFPP   PNPSHSSFPIIAIAIIGIL TAFLLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPP---PNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HR DL+RRLSPSSTRRLPSPTAYSPA ETRGLDESVIRSIPLL YKKS   E+T SECAV
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSS LFHRFPLP+S PE
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPIG G ERDFVVIELGGIRNDPSGQFSQERANS ELPA K EQGKK +KLQKVTSLGDE
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQF IQPIRRSVSMDSSAERQMYLAVQAALQQSRRGS VSPGGDGCNGRGRR
Sbjct: 241 WIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCR++VQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL
Match: A0A1S3AWQ9 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 295/325 (90.77%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKIKTSQHIPPFPP   PNPSHSSFPIIAIAIIGIL TAFLLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPP---PNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HR DL+RRLSPSSTRRLPSPTAYSPA ETRGLDESVIRSIPLL YKKS   E+T SECAV
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSS LFHRFPLP+S PE
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPIG G ERDFVVIELGGIRNDPSGQFSQERANS ELPA K EQGKK +KLQKVTSLGDE
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQF IQPIRRSVSMDSSAERQMYLAVQAALQQSRRGS VSPGGDGCNGRGRR
Sbjct: 241 WIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCR++VQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL
Match: A0A0A0L8B0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.3e-157
Identity = 285/325 (87.69%), Postives = 297/325 (91.38%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           MDFFTKIKTSQHIPPFPP   PNPSHSSFPIIAIAIIGIL TAFLLLSYY+FVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPP---PNPSHSSFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HR DL+RRLSPSSTR LPSPTAYSPAL TRGLDESVIRSIPLL Y KS    +TSSECAV
Sbjct: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF+E ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFH FPLP+S PE
Sbjct: 121 CLSEFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPE 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLGDE 240
           DPI   +ERDF+VIELGGIRN PSGQFSQERANS ELPA K EQGKK +KLQKVTSLGDE
Sbjct: 181 DPIAAATERDFLVIELGGIRNHPSGQFSQERANSRELPAVKLEQGKKWQKLQKVTSLGDE 240

Query: 241 WIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRGRR 300
           WIDTR KDEQFCIQPIRRSVSMDSSAERQMY+AVQAALQQSR G+ VSPGGDGCNGRGRR
Sbjct: 241 WIDTREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRGRR 300

Query: 301 SLFSFGNGRSCRNAVQVQPLRLEEN 326
           SLFSFGNGRSCRNAVQVQP+RLEEN
Sbjct: 301 SLFSFGNGRSCRNAVQVQPVRLEEN 322

[Close]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL
Match: A0A6J1IJC3 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.6e-146
Identity = 267/327 (81.65%), Postives = 291/327 (88.99%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPN  +   +SFPIIAIAIIGILATAFLLLSYY+FVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HRIDLLRRLS SS RR P+P  +SP ++TRGLDESVIRSIPL+QYK S A+ +TSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSSALFHRFPLP S P 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELPA--GKSEQGKKRRKLQKVTSLG 240
           +PIGGG+ERDFVVIELGGIRNDPSGQ SQER NSGE PA  GK EQGKKR KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300
           DEWIDTR KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPLRLEEN 326
           RRSLFSFGNG SCRN V+VQ +RLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL
Match: A0A6J1FW76 (RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 265/327 (81.04%), Postives = 287/327 (87.77%), Query Frame = 0


Query: 1   MDFFTKIKTSQHIPPFPPPNLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNW 60
           M+ F ++K+S ++PPFPPP   +   +SFPIIAIAIIGILATAFLLLSYY+FVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAV 120
           HRIDLLRRLS SS RR P PT +SP + TRGLDESVIRSIPL+QYK S A+ +TSSEC+V
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPE 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP S P 
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELP--AGKSEQGKKRRKLQKVTSLG 240
           DPIGGG+ERDFVVIELGGIRNDPSGQ SQER NSGE P  AGK EQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTRMKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300
           DEWIDTR KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300

Query: 301 RRSLFSFGNGRSCRNAVQVQPLRLEEN 326
           RRSLFSFGNG SCRN V+VQ +RLEE+
Sbjct: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of ClCG05G004378 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 4.1e-75
Identity = 180/360 (50.00%), Postives = 233/360 (64.72%), Query Frame = 0


Query: 14  PPFPPP--NLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRLSP 73
           PP PPP  +  + + +SFPI+A+A+IGILATAFLL+SYY+FVI CCLNWHRID+L R S 
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 74  SSTRRLPSP--TAYSPALETRGLDESVIRSIPLLQYKK-------------STAKEETSS 133
           S  RR        YSP L +RGLDESVIR+IP+ ++KK                +E+ S 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 134 ECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALF--HRFPL 193
           EC+VCLSEF+++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F   R   
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

Query: 194 PNSLPEDPIGGGSERDFVVIELGGI----RNDP-SGQF--SQERANSGEL---------- 253
           P++ PE+ +    E ++VVIELG      R+ P  G+    QER+NSG L          
Sbjct: 197 PSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSIS 256

Query: 254 PAGKS-EQG---KKRRKLQKVTSLGDEWIDTRM-KDEQF-CIQPIRRSVSMDSSAERQMY 313
           P+ K  ++G   +K RKL K+TS+GDE ID R  KDEQF  IQPIRRS+SMDSSA+RQ+Y
Sbjct: 257 PSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLY 316

Query: 314 LAVQAALQQSRRGSAVSPGGDGC--------NGRGRRSLFSFGNGRSCRNAVQVQPLRLE 324
           LAVQ A++++R    V  GG GC        N + +RS FSFG+ R  R++ ++ PL  E
Sbjct: 317 LAVQEAIRKNREVLVVGDGG-GCSSSSGNVSNSKVKRSFFSFGSSRRSRSSSKL-PLYFE 374

[Close]

BLAST of ClCG05G004378 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.4e-67
Identity = 172/369 (46.61%), Postives = 213/369 (57.72%), Query Frame = 0


Query: 14  PPFPPPN-------LPNPSHS--SFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRID 73
           PP PPP+        P  S S  +FPI+AIA+IGILATAFLL+SYYIFVI CCLNWH+ID
Sbjct: 17  PPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQID 76

Query: 74  LLRRLSPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTA------KEETSSEC 133
           + RR   SS +       YSP    RGLDES IR+IP+ ++KK         + + S EC
Sbjct: 77  IFRRRRRSSDQN--PLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQEC 136

Query: 134 AVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALF--------- 193
           +VCL+EF+EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRTS+S  A F         
Sbjct: 137 SVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPS 196

Query: 194 -HRFPLPNSLPEDPIGG---GSERDFVVIELGGIRNDPSGQF-------SQERANSGELP 253
             R   P+S   +   G   G + DFVVIELG    +             QER  S E+ 
Sbjct: 197 SPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVS 256

Query: 254 AGKSEQG--------------KKRRKLQKVTSLGDEWIDTRMKDEQFC-IQPIRRSVSMD 313
            G S +               KK RK  KVTS+GDE IDTR KD  F  IQPIRRS+SMD
Sbjct: 257 TGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMD 316

Query: 314 SSAERQMYLAVQAALQQSRRGSAVSPGGDG----CNGRG-----RRSLFSFGNGRSCRNA 324
           SS +RQ+YLAVQ  +  SRR   +   GDG     +G G     +R  FSFG+ R+ +++
Sbjct: 317 SSVDRQLYLAVQEEI--SRRNRQIPVAGDGEDSSSSGGGNSRVMKRCFFSFGSSRTSKSS 376

[Close]

BLAST of ClCG05G004378 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-24
Identity = 88/249 (35.34%), Postives = 124/249 (49.80%), Query Frame = 0


Query: 16  FPPP------NLPNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRL 75
           FPPP      +  + S S F  + IA+IGILA+AF+L+SYY  +   C   HR    RR 
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HR----RRH 96

Query: 76  SPSST-----RRLPSPTAYSPALETR-----------------GLDESVIRSIPLLQYKK 135
           + SST      R+ S   +                        GLDES+I+SI + +Y+K
Sbjct: 97  NSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK 156

Query: 136 STAKEETSSECAVCLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSA 195
                E SS+C+VCLSEF+E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 MDGFVE-SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 216

Query: 196 LFHRFPLPNS---LPEDPIGGGSERDFVVIELGGIRNDPSGQFSQERANSGELP----AG 230
                 L N       + I  G   D VV+    + N  S     E  N G  P      
Sbjct: 217 AVEIVDLTNQQIVTENNSISTGD--DSVVVVNLDLENSRS---RNETVNEGSTPKPPEMQ 272

[Close]

BLAST of ClCG05G004378 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 3.1e-22
Identity = 80/266 (30.08%), Postives = 128/266 (48.12%), Query Frame = 0


Query: 15  PFPPPNL-----PNPSHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLNWHRIDLLRRL 74
           P PPP+       + S SSF  + IA+IGIL +A +L+SYY  +   C   H+      L
Sbjct: 35  PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETL 94

Query: 75  SPSSTRRLPSPTAYSPALETRGLDESVIRSIPLLQYKKSTAKEETSSECAVCLSEFEEDE 134
           + +        +    +    GL+ES+I+SI + +YK      +  S+C+VCLSEFEE+E
Sbjct: 95  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD-GSDCSVCLSEFEENE 154

Query: 135 TVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSALFHRFPLPNSLPEDPIGGGSER 194
           ++R++P C+H FH+ CID WL+++ NCPLCR  ++                +P     + 
Sbjct: 155 SLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG-------------VNNPTASVGQN 214

Query: 195 DFVVI-----------ELGGIRNDPSGQFSQERANSGELPAGKSEQGKKRRKLQKVTSLG 254
             VV+            +  I  + +G  SQ       +     E G +    +    L 
Sbjct: 215 VSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLP 274

Query: 255 DEWIDTRMKDEQFCIQPIRRSVSMDS 265
           +E  +T+ +D      PIRRSVS++S
Sbjct: 275 EERRETKDEDS----LPIRRSVSLNS 282

[Close]

BLAST of ClCG05G004378 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-20
Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 0


Query: 25  SHSSFPIIAIAIIGILATAFLLLSYYIFVINCCLN---------WHRIDLLRRLSPSSTR 84
           S+ +   + IAI GI ATAFLL +YY  V   C N           R D++  L  +S  
Sbjct: 54  SNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDII--LDVNSPE 113

Query: 85  RLPSPTAYSPALETRGLDESVIRSIPLLQYKK-STAKEETSSECAVCLSEFEEDETVRII 144
           R      ++    T GLD+++I+ I   + KK     +   ++C++CL EF EDE++R++
Sbjct: 114 RGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLL 173

Query: 145 PICSHLFHIDCIDIWLQNNPNCPLCRTSI 164
           P C+H FH+ CID WL+++ NCPLCR  I
Sbjct: 174 PKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200

The following BLAST results are available for this feature:

BLAST of ClCG05G004378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877360.1	1.3e-171	93.54	RING-H2 finger protein ATL16 [Benincasa hispida]	[more]
XP_008438538.1	4.1e-162	90.77	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0049260.1 RING-H2 fin...	[more]
XP_004134414.1	8.9e-157	87.69	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_022975064.1	5.4e-146	81.65	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_022942390.1	3.0e-144	81.04	RING-H2 finger protein ATL16 [Cucurbita moschata]	[more]

BLAST of ClCG05G004378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	5.7e-74	50.00	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.4e-66	46.61	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9SRQ8	7.8e-23	35.34	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	4.3e-21	30.08	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	8.1e-20	27.86	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of ClCG05G004378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D010	2.0e-162	90.77	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AWQ9	2.0e-162	90.77	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1	[more]
A0A0A0L8B0	4.3e-157	87.69	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 P...	[more]
A0A6J1IJC3	2.6e-146	81.65	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE...	[more]
A0A6J1FW76	1.4e-144	81.04	RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 ...	[more]

BLAST of ClCG05G004378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	4.1e-75	50.00	RING/U-box superfamily protein	[more]
AT1G04360.1	2.4e-67	46.61	RING/U-box superfamily protein	[more]
AT3G03550.1	5.6e-24	35.34	RING/U-box superfamily protein	[more]
AT5G17600.1	3.1e-22	30.08	RING/U-box superfamily protein	[more]
AT4G17905.1	1.3e-20	37.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 118..159 e-value: 9.8E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 117..160 e-value: 1.1E-12 score: 48.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 118..160 score: 12.489278
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 82..166 e-value: 5.0E-24 score: 85.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..232
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 17..321
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 117..160 e-value: 1.79202E-18 score: 75.8013
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 99..166
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 17..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G004378.1	ClCG05G004378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity