ClCG05G004070 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G004070
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Arp2/3 complex 34 kDa subunit
Location	CG_Chr05: 3753717 .. 3758092 (-)
RNA-Seq Expression	ClCG05G004070
Synteny	ClCG05G004070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTGGAGTCCTTTCTTCTCATTTAGCATGAAAAAAAAGGAGGTAGAAAGGGCTGTTTGTTCTTGTGAAGATGGCATGCTTTCAGAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGGTGAGAAACAAGTTCATTTGTTCTACATTTTAGGTAAACAGATGAGCATCTTGAAATCCATAAATTCTTTGAGAGAGAAATTTTGAGTTTGGATGAAACTTGGAGAAGGTTTTAGCCTTTAGGCATTAAATTGTATACGTTGTGCTGGAAGATAGCTCTTTTGATTTATTTTTTTTTTTTTCGTTGGATGTGATTACAGTTTGGAGAAGCCCACTGAAATTGAACATCAATTGCATGAATTTGGTTCTGTTCAGTACCATATCAAGGTACAGTCATTCTCATTCATCTGGGATTATGCATGTTGAACATTTGAAATAATGTCCTAATGGCTTGCTGATTGTCTGGCAGTCTTCCATATCAGAAGCACACCACATTTACTTGTCAATTGCCACTCCATTGTTGTCACAAGGGGTTCTTTTATCTGATGGGCTCTCACCGTACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGCTGTTGATATCATTGAACCTGCAAAAGAAGGATACCAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGGTAGTTTCAAACTTGAACAGCTTCAGCCTTCATTAAATAGAAAACTAGTTGATGAAAAAAATTAGTGTCAATGCTACATAGTCTCAGAAAGAAAAGATAAAATTTTTACTACTCGATGATCTCTAGAAGATTGAGGTTAGGCTAATACTTCTCCTGTTGTGCCAAGAATCCCGATAACTATAGTATCAGATTGAAATGTGCGCCTTCTCATAACATTGATTGTTTGATGTGGTTCTACTTTTTGCAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTCCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACCGGCTCCATTTCAAGGAAACTCCAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTCATCAAGCAGGCAAGTCAGAATTTATTTTGTTTCATTTAATCAGAAACTGGAGTTCACAGTGGGAGTGGGAGTATTTTGACGTGATCCAGGTCCCATTCTTTATAAACCCCTTCCTGTGGAAACAGATGAATACTAGCTGACAGAGAAAACAGAGAAACTTGATTGGGGTTATTTCAAATTTTGAGCAAAATACCTTACATTTAAGTTCCACTCTCGATTCATCTTGTACACTGTCATATCTCTTAGTAGACAAATTTCTTGCATTCAGCCCCAAAAGATCCTCATAATCTACCCAATTCGTTTCAAGGAAGATACAGATGTGATCATTGCAACAGCTTTCTTTCGGGTATGTTGCTGAGATCGCAATTCTGGGATCTGTTCTTATTATTTTGATGACTGTATCATTTTATTTTGGATAATACATCTCCTGTAGTCAAAATAGGAACTTATGGATGTGGGAAGCTCTGAAAAATGGTCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCTCCAGAACTGAGAGGCGAACCTATAGAAGAATTGAGCACCAATGGAGGATTTGTCACCTTTGGTACATATATATTTCCATAAATGCTTATGTGTGTGTTACATACAAGTAAAGAATCTGATATCAGTCATATTAAAGTAAAAGACCTCTTGAACTAACGATGGAGCCTATATTTGTCACTTAGTTCAAGTTGATAGATTTGTATGACTATGCTAGACACCCTTTAGCCCTCTCAAACTCTGTGTTGACATAATGTGTCAACAGATATTTCTCTGCACCACGTCGAAGGTAAAAGACTTGACAACACTGTGTGGAGTTTGCTGAACTTTAATGCATATGTTAAGTACCATGTAAAGGTATCGTGTTTGTCCTTTTTATCCAAAACTTGTCTTCCGTGACAACATTTTCCCCCCTTGTCCTTCTGGGAATAACAATAAGGCACTGTATAATATCATCTTTTGTGAACTTTCCACACAGACAACCAAAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGGTAAGTTCAAGTATCCGAATATCAGTGATATTTGGAAGTAGGGGTTTTTCTAAAACAAAAAAATTAATGATGTTTCTCACAACAAATGTCTCGATGTTATATGATTAAGTTTCTTTTCCCAAATGTCTAGATCCTACATCAGAAAACTTCAGATGATGCTGTACTCAACATGGGTCAAGGTATTGTGCTCTTGACAAATATAGAAATGTGTGAATACCATTGTCTTCTCATTTTCCTGTTGGTTTTTCCTTTTTGTTGATTGAATACCATCGTACATTGTTGCTATCATTTTTGATCCCGACCACATTTTACTATAATCTCGAGTGAGTTATGGAAGGATTACAATATATGTAGTTAAGTCAAATAAGTTTTGCAGCATATGGAATTAAAAAGAAGAATTACTTAAGTTTGGCGAGTCATGATTAAACCATCTATTTATCTCATAGCTCAATTCTGTGCAGGCATTATGTATATGAAGAAATTGGTAGCTAGAACTAGACGCATCAAACAGAAATGTCGTAGTTTGGGTAGGAAGATCAAGAGAATCCGATTTCGAATTCGAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGCTGAAGTTCCCAAAGTTTTCTTCTTCAATTCAATACACCAGATTAAAATGAAGTGATTGAATTTAGAATATTGCAACAAGATGAAATGTTTAACATCTCAATGACGCTAATAGAATAACTTTGGAAATAAGATATGTCGTTATACAAGAAATAGATATTTTTACTTCTACTTGCGATGAGGCTTAGAGATTAGTATCTATTAGAATGAACAAACAAACCAAAAGAGAGAGAGTCAATTGTTGCCATTGTCAATTTTCATAGAGAACTTATGTTTAAGATTGCTATTAATCATAATTTGGTTGTAATTTTTATTTATTTACTTGTTGAGTGGTCAAGTCTTTCCAAATTTTATTGCTTCAGTTCAACTAAATAAAGCAAGCTATACTTGAATAAGCAACTTAACAAATGAAGATTCTCTTCTATAAGTTGTTTGGTATATGTACATGAATCTATAAGATTGGACTCCATCATTATCCAATCTAAAAACCAACATTTCATTCTAGTCATCATATACAAAAGCTGCCCATCTCATTCCATCCATCTAACTATATCCATTCCAACAAATGGTGAACATTTGAACTTATGAACTTATACATACATTGACGTCCACTGGACTAAAATATACTTTAAAAAAAAAAAAATTATTACAAAAGTAAATTACATACAACTTAAATTTAAAACGTATCTGGATGGTTCTATCAGAATTTATGTAAATTAAACGTAGGAAATAAGATTTATTAAGCGGCTAGGAAGATGCCGCCTGTAATGAATGGGTTGATAAAAAGGTAGACAGATGGATGCAATCAGGAAAAAGGGCCAATTGAAGTCTGGATTCTGATAATTTTCCAAACCAATAGGGACCATATGTACATACTAAACCAAAATCCAAACCACGAATTTGTGTGGCTCAAAAAATGACTACTCAACTCTCTCTCTCAACTCCATCCAATCTCTCACACAGTTCTACAAAAATATCCCATTTTCACAGAGCATACGAAACCCATTAGAAGCTCCAGCATGCTGGTAAAGACCCTTCAGACATCAGTGGAGACATCTACAAGAACTGCTCTTTGATCTTCCACCCTTTTCATGGCAACTTCAATTGCTGCAACTGGACTTCATAAACCTCTTTCCTCCTCCTTCCATGTAGGCTGGGGAACTTCGATTTGTGGCGACAACAGCATTGTGCTGATCAAGTCAGTCCCGGAAGTGGTTCGAGTTGCAAAGCCTGTAAGATTCAGGCCAATGATGAAGAATATTAATGAAGGGAAAGGTATATTTGCGCCTGTTGTTGTTCTTGCTCGAAATATTATTGGAAAGAAACGTTTCAATCAGTTGAGAGGCAAGGCCATTGCCCTGCACTCGCAGGTAAAATTAGTTAGCCTTCTTCACTTGAATTCTCCTTTACAGGTTTAGCGAGAAAGTTGTGTTGAAGTTTTTCCTTTTGGACAGATAATTACTGAGTTCTGCAAATCTATAGGAGCTGATGCAAAGCAAAGGCAGGGATTGATTAGGTTAGCCAAGAAGAATGGAGAAAGATTAGGATTCCTTGCTTGATCTGATCTGATTTGATCTGATCATGTTTCTGTGATCACCATGGATGCCCTATATAAATCATAGATCTGTCTGAGCTTCCACAAAT

mRNA sequence

ATGTATTGGAGTCCTTTCTTCTCATTTAGCATGAAAAAAAAGGAGGTAGAAAGGGCTGTTTGTTCTTGTGAAGATGGCATGCTTTCAGAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGTTTGGAGAAGCCCACTGAAATTGAACATCAATTGCATGAATTTGGTTCTGTTCAGTACCATATCAAGTCTTCCATATCAGAAGCACACCACATTTACTTGTCAATTGCCACTCCATTGTTGTCACAAGGGGTTCTTTTATCTGATGGGCTCTCACCGTACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGCTGTTGATATCATTGAACCTGCAAAAGAAGGATACCAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTCCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACCGGCTCCATTTCAAGGAAACTCCAGACCCATCAAACTTCCCCAAAAGATCCTCATAATCTACCCAATTCGTTTCAAGGAAGATACAGATGTGATCATTGCAACAGCTTTCTTTCGGGAACTTATGGATGTGGGAAGCTCTGAAAAATGGTCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCTCCAGAACTGAGAGGCGAACCTATAGAAGAATTGAGCACCAATGGAGGATTTGTCACCTTTGGTAAAAGACTTGACAACACTGTGTGGAGTTTGCTGAACTTTAATGCATATGTTAAGTACCATGTAAAGACAACCAAAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGATCCTACATCAGAAAACTTCAGATGATGCTGTACTCAACATGGGTCAAGGCATTATGTATATGAAGAAATTGGTAGCTAGAACTAGACGCATCAAACAGAAATGTCGTAGTTTGGGTAGGAAGATCAAGAGAATCCGATTTCGAATTCGAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGCTGAAACATCAGTGGAGACATCTACAAGAACTGCTCTTTGATCTTCCACCCTTTTCATGGCAACTTCAATTGCTGCAACTGGACTTCATAAACCTCTTTCCTCCTCCTTCCATCATTGTGCTGATCAAGTCAGTCCCGGAAGTGGTTCGAGTTGCAAAGCCTGTAAGATTCAGGCCAATGATGAAGAATATTAATGAAGGGAAAGGTATATTTGCGCCTGTTGTTGTTCTTGCTCGAAATATTATTGGAAAGAAACGTTTCAATCAGTTGAGAGGCAAGGCCATTGCCCTGCACTCGCAGATAATTACTGAGTTCTGCAAATCTATAGGAGCTGATGCAAAGCAAAGGCAGGGATTGATTAGGTTAGCCAAGAAGAATGGAGAAAGATTAGGATTCCTTGCTTGATCTGATCTGATTTGATCTGATCATGTTTCTGTGATCACCATGGATGCCCTATATAAATCATAGATCTGTCTGAGCTTCCACAAAT

Coding sequence (CDS)

ATGGCATGCTTTCAGAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGTTTGGAGAAGCCCACTGAAATTGAACATCAATTGCATGAATTTGGTTCTGTTCAGTACCATATCAAGTCTTCCATATCAGAAGCACACCACATTTACTTGTCAATTGCCACTCCATTGTTGTCACAAGGGGTTCTTTTATCTGATGGGCTCTCACCGTACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGCTGTTGATATCATTGAACCTGCAAAAGAAGGATACCAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTCCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACCGGCTCCATTTCAAGGAAACTCCAGACCCATCAAACTTCCCCAAAAGATCCTCATAATCTACCCAATTCGTTTCAAGGAAGATACAGATGTGATCATTGCAACAGCTTTCTTTCGGGAACTTATGGATGTGGGAAGCTCTGAAAAATGGTCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCTCCAGAACTGAGAGGCGAACCTATAGAAGAATTGAGCACCAATGGAGGATTTGTCACCTTTGGTAAAAGACTTGACAACACTGTGTGGAGTTTGCTGAACTTTAATGCATATGTTAAGTACCATGTAAAGACAACCAAAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGATCCTACATCAGAAAACTTCAGATGATGCTGTACTCAACATGGGTCAAGGCATTATGTATATGAAGAAATTGGTAGCTAGAACTAGACGCATCAAACAGAAATGTCGTAGTTTGGGTAGGAAGATCAAGAGAATCCGATTTCGAATTCGAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGCTGAAACATCAGTGGAGACATCTACAAGAACTGCTCTTTGATCTTCCACCCTTTTCATGGCAACTTCAATTGCTGCAACTGGACTTCATAAACCTCTTTCCTCCTCCTTCCATCATTGTGCTGATCAAGTCAGTCCCGGAAGTGGTTCGAGTTGCAAAGCCTGTAAGATTCAGGCCAATGATGAAGAATATTAATGAAGGGAAAGGTATATTTGCGCCTGTTGTTGTTCTTGCTCGAAATATTATTGGAAAGAAACGTTTCAATCAGTTGAGAGGCAAGGCCATTGCCCTGCACTCGCAGATAATTACTGAGTTCTGCAAATCTATAGGAGCTGATGCAAAGCAAAGGCAGGGATTGATTAGGTTAGCCAAGAAGAATGGAGAAAGATTAGGATTCCTTGCTTGA

Protein sequence

MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLLSQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDIAAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKLPQKILIIYPIRFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTFGKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLNMGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLKHQWRHLQELLFDLPPFSWQLQLLQLDFINLFPPPSIIVLIKSVPEVVRVAKPVRFRPMMKNINEGKGIFAPVVVLARNIIGKKRFNQLRGKAIALHSQIITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA

Homology

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BLAST of ClCG05G004070 vs. NCBI nr
Match: XP_038883843.1 (actin-related protein 2/3 complex subunit 2B isoform X1 [Benincasa hispida])

HSP 1 Score: 587.0 bits (1512), Expect = 1.4e-163
Identity = 307/351 (87.46%), Postives = 317/351 (90.31%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTE+EH LHEFGSVQYHI+SS+S    I+LSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEMEHHLHEFGSVQYHIQSSVSNPQQIFLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQ VLLSDGLSPYTVEMVKQICSHAV+IIEPAKEGYQLTLRIDSAKILHGEESEKIITDI
Sbjct: 61  SQAVLLSDGLSPYTVEMVKQICSHAVEIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRN-VNSPAPFQGNSRPIKL-------------PQKILIIYPIRF 180
           AAVQAVIISSQLKE+LRN VNSPA FQG SRPIKL             PQKIL+IYPIRF
Sbjct: 121 AAVQAVIISSQLKEVLRNVVNSPAHFQGTSRPIKLVYHPREPFFVIKQPQKILVIYPIRF 180

Query: 181 KEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF-- 240
           KEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEP+EELSTNGGFVTF  
Sbjct: 181 KEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDI 240

Query: 241 ------GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVL 300
                 GKRLD TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQKTSDDAVL
Sbjct: 241 SLHHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKTSDDAVL 300

Query: 301 NMGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
           N G+GIMYMKKLVART RIKQKCRSL RKIKRIRFRIRIPGFARFRRRWLK
Sbjct: 301 NKGRGIMYMKKLVARTNRIKQKCRSLSRKIKRIRFRIRIPGFARFRRRWLK 351

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BLAST of ClCG05G004070 vs. NCBI nr
Match: XP_004134045.2 (actin-related protein 2/3 complex subunit 2B [Cucumis sativus] >KGN56823.1 hypothetical protein Csa_011299 [Cucumis sativus])

HSP 1 Score: 582.0 bits (1499), Expect = 4.5e-162
Identity = 301/350 (86.00%), Postives = 317/350 (90.57%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEH LHE+GSVQYHI+SS+ +  HIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQG LLSDGLSPYTVEMVKQICSHA++IIEPAKEGY+LTLRI+SAKILHGEESEKIITDI
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAVQAVIISS+LKE+LRNVNSP  FQG SRPIKL             PQKILIIYPIRFK
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRLDNTVWSLLNFNAYVKYHVKTT+GFIQRRMR+RLEGLVEILHQK+SD AVLN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRRRLEGLVEILHQKSSDVAVLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKLVART+RIKQKCRSL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIKYMKKLVARTKRIKQKCRSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. NCBI nr
Match: XP_008438473.1 (PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis melo])

HSP 1 Score: 573.5 bits (1477), Expect = 1.6e-159
Identity = 300/350 (85.71%), Postives = 314/350 (89.71%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEH LHE+GSVQYHI+SS+ +  HIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYTVEMVKQI SHAV+IIEPAKEGY+LTLRIDSAKILHGEESEKIITDI
Sbjct: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAVQAVIISSQLKE+LRNVNSP  FQG SRPIKL             PQKILIIYPIRFK
Sbjct: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           EDTDVIIATAFFRELMDVGSSEKWS+APPC WSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSEAPPCGWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRLDNTVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQK+SD AVLN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKSSDVAVLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKLVA T+ IKQKCRSL RKIKRIRFRI+IPGFARFR+RWLK
Sbjct: 301 KGQGIKYMKKLVASTKHIKQKCRSLSRKIKRIRFRIKIPGFARFRQRWLK 350

[Close]

BLAST of ClCG05G004070 vs. NCBI nr
Match: XP_023527991.1 (actin-related protein 2/3 complex subunit 2B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 562.8 bits (1449), Expect = 2.8e-156
Identity = 290/350 (82.86%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYS E PTEIEH LHEFGSVQYHI+S IS++ H+YLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSSENPTEIEHHLHEFGSVQYHIQSFISDSLHVYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYT+EMVKQICSHAV+IIEPAKEGY+LTLRID AKI+H EE EKIITDI
Sbjct: 61  SQGVLLSDGLSPYTLEMVKQICSHAVEIIEPAKEGYKLTLRIDFAKIMHEEEPEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAV AVI+SSQLKEML NVNSPA FQG SRPIKL             PQKILI++PIRFK
Sbjct: 121 AAVHAVILSSQLKEMLLNVNSPALFQGTSRPIKLVYHPREPFFVIKQPQKILIVFPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           E+TDVIIATAFFRELMDVGSSEKWSK PPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 ENTDVIIATAFFRELMDVGSSEKWSKTPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                G RL+ TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQKTSDD +LN
Sbjct: 241 VHHVEGNRLEKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKTSDDGLLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKL ART+RIKQKC SL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIKYMKKLAARTKRIKQKCHSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. NCBI nr
Match: XP_022924634.1 (actin-related protein 2/3 complex subunit 2B [Cucurbita moschata])

HSP 1 Score: 562.4 bits (1448), Expect = 3.7e-156
Identity = 291/350 (83.14%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYS E PTEIEH LHEFGSVQYHI+SSIS++ H+YLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSSENPTEIEHHLHEFGSVQYHIQSSISDSLHVYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYT+EMVKQICSHAV+IIEPAKEGY+LTLRID AKILH EE EKIITDI
Sbjct: 61  SQGVLLSDGLSPYTLEMVKQICSHAVEIIEPAKEGYKLTLRIDFAKILHEEEPEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAV AVI+SSQLKEML NVNSPA  QG SRPIKL             PQKILI++PIRFK
Sbjct: 121 AAVHAVILSSQLKEMLINVNSPALCQGTSRPIKLVYHPREPFFVIKQPQKILIVFPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           E+TDVIIATAFFRELMDVGSSEKWSK PPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 ENTDVIIATAFFRELMDVGSSEKWSKTPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRL+ TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQKTSDD +LN
Sbjct: 241 VHHVEGKRLEKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKTSDDGLLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKL ART+ IKQKC SL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIKYMKKLAARTKHIKQKCHSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot
Match: F4IVU1 (Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana OX=3702 GN=ARPC2B PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.4e-81
Identity = 165/360 (45.83%), Postives = 243/360 (67.50%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MA  +RASP LKE LLK+Y  EKP E++   HEFGS++YHIK S+S+ + +++S +T L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           +QG +    +S YT E++K I    +DI++P + G+QLTL ++   I  G+E+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPI------------------KLPQKILIIY 180
           + +QA+I+SSQLKEMLR++N    FQ +SR I                  K P+KI  ++
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+EL++VGS +   KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQELVEVGSQKDMGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TF--------GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKT-S 300
           +F        GKRLD TVW+LLNF A  KYH+K ++G+IQRRMRKR+E LV++L+  +  
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 DDAVLNMGQGIMYMKKLVARTR---RIKQKCRSLGRKIKRIRFRIRIPGFARFR--RRWL 329
           ++A  N      Y+K+ V   +    +KQ+C+ + R++K  +FRI+I G ARFR  +RW+
Sbjct: 301 EEAAQNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRWI 356

[Close]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot
Match: Q8LGI3 (Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana OX=3702 GN=ARPC2A PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.3e-42
Identity = 94/281 (33.45%), Postives = 163/281 (58.01%), Query Frame = 0


Query: 11  LKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLLSQGVLLSDGL 70
           L+ +L +  +L+K  E+++Q  EF  V+YH++ ++   + + LS++ P      +  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDIAAVQAVIISS 130
               +E +K        I++P ++G+ LTL+++ +K+      E+++T +A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEMLRNVNS--PAP---------FQGNSRPIKLPQ--KILIIYPIRFKEDTDVIIATA 190
            LK + +++ S   AP          + N     +PQ  K+ + +P+RFK+  D I+AT+
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATS 191

Query: 191 FFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--------GKRLD 250
           F +E ++   +   + AP C WSP  P EL G P E LS N GFVTF        GK+LD
Sbjct: 192 FLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLD 251

Query: 251 NTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQ 271
            TVW+L  F+AYV YHVK ++GF+  RMR+R+E +++ L Q
Sbjct: 252 RTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQ 289

[Close]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot
Match: Q9SL05 (Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR5 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.7e-35
Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 373 PEVVRVA-KPVRFRPMMKNINEGKGIFAPVVVLARNIIGKKRFNQLRGKAIALHSQIITE 432
           P+  RV+ K +R  PMMKN+NEGKG+FAP+VV+ RN++GKKRFNQLRGKAIALHSQ+ITE
Sbjct: 44  PQQARVSRKAIRAVPMMKNVNEGKGLFAPLVVVTRNLVGKKRFNQLRGKAIALHSQVITE 103

Query: 433 FCKSIGADAKQRQGLIRLAKKNGERLGFLA 462
           FCKSIGADAKQRQGLIRLAKKNGERLGFLA
Sbjct: 104 FCKSIGADAKQRQGLIRLAKKNGERLGFLA 133

[Close]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot
Match: O14241 (Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=arc2 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.3e-10
Identity = 67/299 (22.41%), Postives = 138/299 (46.15%), Query Frame = 0


Query: 13  EILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLLSQGVLLSDGLSP 72
           E+L + +S E P+ I+  + +F  V +HI S+  E   I +S++     +  L++ G   
Sbjct: 13  ELLTERFSSENPSSIDQVVTDFDGVTFHI-STPEEKTKILISLSMKCYPE--LVNYG--- 72

Query: 73  YTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKI-LHGEESEKIITDIAAVQAVIIS-- 132
            T++++KQI  +   + EP + GY  ++ ID  ++    EE E++   I+ ++  +++  
Sbjct: 73  -TLDLLKQI--YGAYVHEP-EMGYNFSILIDLQQLPATDEEKEQLAMSISMLKRNVLAAP 132

Query: 133 --------SQLKEMLRNVNSPAPF---QGNSRPIKL--------------PQKILIIYPI 192
                   ++L ++ R     AP    Q  S+ +                  ++ +++  
Sbjct: 133 FHRAFTKQAELADLARKDPENAPMLDKQATSQELMAIHYRDEETIVLWPEHDRVTVVFST 192

Query: 193 RFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPP-ELRGEPIEELSTNGGFVT 252
           +F+E+TD I    F +E +D         AP   +S   PP E+R     +   + GFVT
Sbjct: 193 KFREETDRIFGKVFLQEFVDARRRPAIQTAPQVLFSYRDPPLEIRDIQGIQKGDDFGFVT 252

Query: 253 F--------GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSD 275
           F         +  ++ +  +  F   + +H+K +K ++ +RMRKR+    ++L++   D
Sbjct: 253 FVLFERHFTPQNREDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVADFQKVLNRAKPD 301

[Close]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot
Match: O96623 (Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium discoideum OX=44689 GN=arcB PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.1e-09
Identity = 59/257 (22.96%), Postives = 124/257 (48.25%), Query Frame = 0


Query: 33  EFGSVQYHIKSSISEAHHIYLSIATPLLSQGVLLSDGLSPYTVEMVKQICSHAVDIIEPA 92
           +F  V++++++S  ++    L ++  L +   LL +G S     ++K +     D+++  
Sbjct: 31  DFDGVKFNVQTSDDKSS---LMVSVSLHAAADLLKNGGS----ALLKSVYG---DMLQAK 90

Query: 93  KE-GYQLTLRIDSAKILHGEESEKIITDIAAVQAVIISSQLKEMLRNVNSPAP------- 152
            E GY +TL I S+        E++   ++ ++  ++++    +   + +  P       
Sbjct: 91  PEGGYDVTLVIQSS---FSGNKEELAKKVSLLKRHLVAAPFLMVFEGIEAKKPLPEIIAI 150

Query: 153 -FQGNSRPIKLPQ--KILIIYPIRFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSP 212
            ++ +      PQ   +++I+ I FK+  DVI++  F +  +DV   +  S  P   +S 
Sbjct: 151 NYRTDETFYLKPQGDNVIVIFDIAFKDADDVILSKIFLQSFVDV--RKTISNVPSITFSQ 210

Query: 213 IPPP-ELRG-EPIEELSTNGGFVTFG------KRLDNTVWSLLNFNAYVKYHVKTTKGFI 271
             PP EL+G + +     N GFV+F       K+   +   +  F  Y+ YH+K  KG++
Sbjct: 211 KDPPLELKGVKGVRAGQANHGFVSFVLFPAHIKKPQESADLIQTFRDYLHYHIKCAKGYM 270

[Close]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL
Match: A0A0A0L4Y8 (Arp2/3 complex 34 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G134720 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 2.2e-162
Identity = 301/350 (86.00%), Postives = 317/350 (90.57%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEH LHE+GSVQYHI+SS+ +  HIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQG LLSDGLSPYTVEMVKQICSHA++IIEPAKEGY+LTLRI+SAKILHGEESEKIITDI
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAVQAVIISS+LKE+LRNVNSP  FQG SRPIKL             PQKILIIYPIRFK
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRLDNTVWSLLNFNAYVKYHVKTT+GFIQRRMR+RLEGLVEILHQK+SD AVLN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRRRLEGLVEILHQKSSDVAVLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKLVART+RIKQKCRSL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIKYMKKLVARTKRIKQKCRSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL
Match: A0A1S3AWJ6 (Arp2/3 complex 34 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103483557 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 7.7e-160
Identity = 300/350 (85.71%), Postives = 314/350 (89.71%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEH LHE+GSVQYHI+SS+ +  HIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYTVEMVKQI SHAV+IIEPAKEGY+LTLRIDSAKILHGEESEKIITDI
Sbjct: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAVQAVIISSQLKE+LRNVNSP  FQG SRPIKL             PQKILIIYPIRFK
Sbjct: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           EDTDVIIATAFFRELMDVGSSEKWS+APPC WSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSEAPPCGWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRLDNTVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQK+SD AVLN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKSSDVAVLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKLVA T+ IKQKCRSL RKIKRIRFRI+IPGFARFR+RWLK
Sbjct: 301 KGQGIKYMKKLVASTKHIKQKCRSLSRKIKRIRFRIKIPGFARFRQRWLK 350

[Close]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL
Match: A0A6J1E9R3 (Arp2/3 complex 34 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111432067 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.8e-156
Identity = 291/350 (83.14%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYS E PTEIEH LHEFGSVQYHI+SSIS++ H+YLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSSENPTEIEHHLHEFGSVQYHIQSSISDSLHVYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYT+EMVKQICSHAV+IIEPAKEGY+LTLRID AKILH EE EKIITDI
Sbjct: 61  SQGVLLSDGLSPYTLEMVKQICSHAVEIIEPAKEGYKLTLRIDFAKILHEEEPEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAV AVI+SSQLKEML NVNSPA  QG SRPIKL             PQKILI++PIRFK
Sbjct: 121 AAVHAVILSSQLKEMLINVNSPALCQGTSRPIKLVYHPREPFFVIKQPQKILIVFPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           E+TDVIIATAFFRELMDVGSSEKWSK PPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 ENTDVIIATAFFRELMDVGSSEKWSKTPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRL+ TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEILHQKTSDD +LN
Sbjct: 241 VHHVEGKRLEKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKTSDDGLLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGI YMKKL ART+ IKQKC SL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIKYMKKLAARTKHIKQKCHSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL
Match: A0A6J1IVZ9 (Arp2/3 complex 34 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111479113 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 8.8e-156
Identity = 289/350 (82.57%), Postives = 308/350 (88.00%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MACFQRASPALKEILLKLYS E PTEIEH LHEFGSVQYHI+S IS++ H+YLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSSENPTEIEHHLHEFGSVQYHIQSFISDSLHVYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYT+EMVKQICSH V+IIEPAKEGY+LTLRID AKILH EE EKIITDI
Sbjct: 61  SQGVLLSDGLSPYTLEMVKQICSHGVEIIEPAKEGYKLTLRIDFAKILHEEEPEKIITDI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAV AVI+SSQLKEML NVNSPA FQG SRPIKL             PQKILI++PIRFK
Sbjct: 121 AAVHAVILSSQLKEMLINVNSPALFQGTSRPIKLVYHPREPFFVIKQPQKILIVFPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           E+TDVIIATAFF ELMDVGSSEKWS+ PPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 ENTDVIIATAFFWELMDVGSSEKWSETPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRL+ TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLV+ILHQKTSDD +LN
Sbjct: 241 VHHVEGKRLEKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVDILHQKTSDDGLLN 300

Query: 301 MGQGIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQGIMYMKKL ART+RIKQKC SL RKIKRIRFRI+IPGFARFRRRWLK
Sbjct: 301 KGQGIMYMKKLAARTKRIKQKCHSLSRKIKRIRFRIKIPGFARFRRRWLK 350

[Close]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL
Match: A0A6J1DLF7 (Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 5.3e-145
Identity = 274/352 (77.84%), Postives = 303/352 (86.08%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MA FQRASPALKEILLKL SLEKPTEIEH LHEFGSVQY I+ S+S+  +IYLSI+TPLL
Sbjct: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           SQG LLSDGLS +TVEMVKQICSH V+I+EPA+EGYQLTL+ID A+ILHG+ESEKIIT+I
Sbjct: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPIKL-------------PQKILIIYPIRFK 180
           AAVQAVI+SSQLKEMLRNVNS A F    RPIKL              QKIL+I+PIRFK
Sbjct: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180

Query: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--- 240
           E TDVIIATAFFRELMDVGSSEKW+KAPPCCWSPIPPPELRGEP+EELSTNGGFVTF   
Sbjct: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 -----GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKTSDDAVLN 300
                GKRLD TVWSLLNFNAYVKYHVKTT+GFIQRRMRKRLEGLVEIL+QK SD+ +LN
Sbjct: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300

Query: 301 MGQ--GIMYMKKLVARTRRIKQKCRSLGRKIKRIRFRIRIPGFARFRRRWLK 330
            GQ  GI+YMKKLVA+T+ +KQKCR+L +KIKR RFRI+IPGFARFRRRWLK
Sbjct: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLK 352

[Close]

BLAST of ClCG05G004070 vs. TAIR 10
Match: AT2G33385.2 (actin-related protein C2B )

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-82
Identity = 165/360 (45.83%), Postives = 243/360 (67.50%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MA  +RASP LKE LLK+Y  EKP E++   HEFGS++YHIK S+S+ + +++S +T L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           +QG +    +S YT E++K I    +DI++P + G+QLTL ++   I  G+E+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPI------------------KLPQKILIIY 180
           + +QA+I+SSQLKEMLR++N    FQ +SR I                  K P+KI  ++
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+EL++VGS +   KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQELVEVGSQKDMGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TF--------GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKT-S 300
           +F        GKRLD TVW+LLNF A  KYH+K ++G+IQRRMRKR+E LV++L+  +  
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 DDAVLNMGQGIMYMKKLVARTR---RIKQKCRSLGRKIKRIRFRIRIPGFARFR--RRWL 329
           ++A  N      Y+K+ V   +    +KQ+C+ + R++K  +FRI+I G ARFR  +RW+
Sbjct: 301 EEAAQNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRWI 356

[Close]

BLAST of ClCG05G004070 vs. TAIR 10
Match: AT2G33385.1 (actin-related protein C2B )

HSP 1 Score: 287.7 bits (735), Expect = 1.6e-77
Identity = 160/360 (44.44%), Postives = 237/360 (65.83%), Query Frame = 0


Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLL 60
           MA  +RASP LKE LLK+Y  EKP E++   HEFGS++YHIK S+S+ + +++S +T L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGVLLSDGLSPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120
           +QG +    +S YT E++K I    +DI++P + G+QLTL ++   I  G+E+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVIISSQLKEMLRNVNSPAPFQGNSRPI------------------KLPQKILIIY 180
           + +QA+I+SSQLKEMLR++N    FQ +SR I                  K P+KI  ++
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+++          KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQDM---------GKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TF--------GKRLDNTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQKT-S 300
           +F        GKRLD TVW+LLNF A  KYH+K ++G+IQRRMRKR+E LV++L+  +  
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 DDAVLNMGQGIMYMKKLVARTR---RIKQKCRSLGRKIKRIRFRIRIPGFARFR--RRWL 329
           ++A  N      Y+K+ V   +    +KQ+C+ + R++K  +FRI+I G ARFR  +RW+
Sbjct: 301 EEAAQNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRWI 347

[Close]

BLAST of ClCG05G004070 vs. TAIR 10
Match: AT1G30825.1 (Arp2/3 complex, 34 kD subunit p34-Arc )

HSP 1 Score: 173.3 bits (438), Expect = 4.4e-43
Identity = 94/281 (33.45%), Postives = 163/281 (58.01%), Query Frame = 0


Query: 11  LKEILLKLYSLEKPTEIEHQLHEFGSVQYHIKSSISEAHHIYLSIATPLLSQGVLLSDGL 70
           L+ +L +  +L+K  E+++Q  EF  V+YH++ ++   + + LS++ P      +  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SPYTVEMVKQICSHAVDIIEPAKEGYQLTLRIDSAKILHGEESEKIITDIAAVQAVIISS 130
               +E +K        I++P ++G+ LTL+++ +K+      E+++T +A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEMLRNVNS--PAP---------FQGNSRPIKLPQ--KILIIYPIRFKEDTDVIIATA 190
            LK + +++ S   AP          + N     +PQ  K+ + +P+RFK+  D I+AT+
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATS 191

Query: 191 FFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPIEELSTNGGFVTF--------GKRLD 250
           F +E ++   +   + AP C WSP  P EL G P E LS N GFVTF        GK+LD
Sbjct: 192 FLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLD 251

Query: 251 NTVWSLLNFNAYVKYHVKTTKGFIQRRMRKRLEGLVEILHQ 271
            TVW+L  F+AYV YHVK ++GF+  RMR+R+E +++ L Q
Sbjct: 252 RTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQ 289

[Close]

BLAST of ClCG05G004070 vs. TAIR 10
Match: AT2G05620.1 (proton gradient regulation 5 )

HSP 1 Score: 149.4 bits (376), Expect = 6.9e-36
Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 373 PEVVRVA-KPVRFRPMMKNINEGKGIFAPVVVLARNIIGKKRFNQLRGKAIALHSQIITE 432
           P+  RV+ K +R  PMMKN+NEGKG+FAP+VV+ RN++GKKRFNQLRGKAIALHSQ+ITE
Sbjct: 44  PQQARVSRKAIRAVPMMKNVNEGKGLFAPLVVVTRNLVGKKRFNQLRGKAIALHSQVITE 103

Query: 433 FCKSIGADAKQRQGLIRLAKKNGERLGFLA 462
           FCKSIGADAKQRQGLIRLAKKNGERLGFLA
Sbjct: 104 FCKSIGADAKQRQGLIRLAKKNGERLGFLA 133

The following BLAST results are available for this feature:

BLAST of ClCG05G004070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883843.1	1.4e-163	87.46	actin-related protein 2/3 complex subunit 2B isoform X1 [Benincasa hispida]	[more]
XP_004134045.2	4.5e-162	86.00	actin-related protein 2/3 complex subunit 2B [Cucumis sativus] >KGN56823.1 hypot...	[more]
XP_008438473.1	1.6e-159	85.71	PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis melo]	[more]
XP_023527991.1	2.8e-156	82.86	actin-related protein 2/3 complex subunit 2B [Cucurbita pepo subsp. pepo]	[more]
XP_022924634.1	3.7e-156	83.14	actin-related protein 2/3 complex subunit 2B [Cucurbita moschata]	[more]

BLAST of ClCG05G004070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IVU1	2.4e-81	45.83	Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8LGI3	6.3e-42	33.45	Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SL05	9.7e-35	81.11	Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
O14241	8.3e-10	22.41	Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces pombe (strain...	[more]
O96623	4.1e-09	22.96	Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of ClCG05G004070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Y8	2.2e-162	86.00	Arp2/3 complex 34 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G134720 PE=3 SV...	[more]
A0A1S3AWJ6	7.7e-160	85.71	Arp2/3 complex 34 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103483557 PE=3 SV=1	[more]
A0A6J1E9R3	1.8e-156	83.14	Arp2/3 complex 34 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111432067 PE=3...	[more]
A0A6J1IVZ9	8.8e-156	82.57	Arp2/3 complex 34 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111479113 PE=3 S...	[more]
A0A6J1DLF7	5.3e-145	77.84	Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=...	[more]

BLAST of ClCG05G004070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33385.2	1.7e-82	45.83	actin-related protein C2B	[more]
AT2G33385.1	1.6e-77	44.44	actin-related protein C2B	[more]
AT1G30825.1	4.4e-43	33.45	Arp2/3 complex, 34 kD subunit p34-Arc	[more]
AT2G05620.1	6.9e-36	81.11	proton gradient regulation 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 152..282 e-value: 5.9E-35 score: 122.2
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 1..137 e-value: 6.4E-26 score: 93.1
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 1..126
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 154..271
IPR007188	Actin-related protein 2/3 complex subunit 2	PFAM	PF04045	P34-Arc	coord: 90..270 e-value: 2.6E-17 score: 63.3
IPR007188	Actin-related protein 2/3 complex subunit 2	PANTHER	PTHR12058	ARP2/3 COMPLEX 34 KDA SUBUNIT	coord: 1..321
None	No IPR available	PANTHER	PTHR12058:SF1	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2B	coord: 1..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G004070.1	ClCG05G004070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
biological_process	GO:0030041	actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005200	structural constituent of cytoskeleton