ClCG05G003110 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G003110
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DNA repair protein RAD50
Location	CG_Chr05: 2961846 .. 2977371 (-)
RNA-Seq Expression	ClCG05G003110
Synteny	ClCG05G003110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGACATCTGTTGGTATCGTAAGGACAAAGCTAGCGAAACCATGGCGACGAAGCGATGAACTGATACTCTACGCATGACGACGAAGTGAAGTCCGCAAGCTTCTTCTGAAGCGTCTTCTTCACTGCCAGCATTCTAAATACCGAACCGAGTTTTGAGCCCTTTTCGATTCTCAGAGTGAGAATTTAAAACCCCTTTCCCGCCATGGTTGCAGTTGTTTATCGGTGAAACTTTTTCGTACGATCGTTGTCCGTGGAATTTGCGCACTCTGTATTTTGAAAAGAATTTTCGGATAGCAGGGAAAAGTAGTAAAGATGAGTACAGTGGACAAGATGTTGATAAAAGGTATTAGGAGTTTCGACCCCGAAAATAGGAACGTCATCACCTTCTTCAAGCCATTGACGCTGATCGTTGGCCCTAACGGTGCTGGGAAAACTGTAATTTCTTCTCGAACTCCATTTTAATATTTAAGTAACCAGTGTTCATGGTCTTTGATGTACTTTACTCAAATATATTGGAACATTTGCTTTGGGGGCGACTTGGTTTTTTTTTTTTTTTTTTCCCAGACCATAATTGAGTGCTTGAAGCTCTCTTGTACCGGCGAGTTGCCTCCCAATGCGAGGTCCGGCCACAGCTTCATTCACGACCCTAAGGTCCGTCTGTTTTTGCACTTTCAGTTCCTTTGATCTGCTTATGTTTTGTGATCAGTTGATAGCTGTCATTTTCGTTGACGTAATATTGGATTTGGACGAGAGGTGAAAGGGTTATCCATATGTAGGCTTTCCAATATTCTCAGCTCATGTAGCTTCTTCGTTAAATAGAGAATTTGGATTTTGTTTTCTTAAAAGCTCACTTGTTCGTCTATCTGGGTCTTCTTGGACGCTCGTGTAGGTTGCAGGAGAGACAGAGACAAAGGGACAAATCAAGCTTCGGTTTAAGACAGCTGCAGGTAAGGACGTGGTTTGCATAAGGTCATTCCAACTTACTCAGAAGGCATCCAAAATGGAGTATAAAGCAATTGAAAGCGTGCTTCAGACAATAAATCCACATACTGGAGAGGTGATGCATATTTATTATTTACATTTTTACATTAGTAATTTTTTACTTATCGCTCACACGGATTAAGAAGGTTTCTCAAGGTGAAGAAAAGAGGATGGTAGTTTGAAATAAAGGGAGTGTTGAGTGGAATTACAAAGCTTCTTCTTGCTCAAAAGAAGCTTGGGCATTTAGAATTTCCTTTGATATGCAAGATTTAGAAAAAGTAGAATTGGGATCAAGGAATCCGGCATGGTAATATCTTCAATAACTATTCAGTTGGTGTCGGCGGTATTTCTAGAGGATGGAAATGAAAAGCTAGTGGACAGTCCAAGAAATGACAAATTCTTCATGATGAATGTGGGGGTATGTTGGAAGTGTGAAAACTTAATTCGTATGATGGATAAGAGAGTATTTTCAATTCAGAAGGAAGGGAAATGGAGGTTTGGAGGAAGTTCAAACAATTAAATGATTTTGTGTTTAAACTTAAAAGAAGTTGAGGACCACGGATCTAAAGAGGAAAGAGGAAAGAGAGTGGGAAAAGGCAATTTGGAGTATACAATCTTTGAAGATTTCACTTTGAATTCGATAAGATGCCATGATGGATTTAGTAGACGAACATACAAAGAAAGTTATGGTGTTGTTCACCTACTGGTTTCATCATTGATGTTGAGAGGGCATCCTTGCTTTTGTTATTATTCTCTTGTACAATCTTTTGGTGCCAACTTTTCATTTTAACGTGGTCACTACTTTAGATAAAGGCAGTCAGTCCTTCCTGACTATCAGTAACCCAATTTCTTGGTAATTGTTATTTTCCCTTTTCTTAAAAAGAGCACTGCGATGTTTTCTTACAGAACTTTCATGTTTTCTTGTTATAGAAATGTGGCATCCTTTTCCTGATGCATTGACATATCCTCAGATTGTAAATGTTGTTAATAATTTTGTTTGCTTTTAATGAGGTTGGTAAATAAAAATGATGCAGTGATTATTGTTTGTGCTGTTGATCATGCATACTTGTTGACGGAGTAGTGGCAAGGGGATGTGGTGATTTGAGCTTTATGCTTTTGGTTAAAACTTTACATCCTTAATTTCAATTATCATCGTTTCTATTGTTGTAAAATTGCAGAAAGTTTGTCTGAGCTATAGATGTGCAGACATGGATAGGGAGATTCCTGCGTTAATGGGTGTGTCAAAGGCTGTTCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCCAACTGGCCATTGCAAGATCCTTCGACACTAAAGAAGAAATTTGATGATATCTTCTCTGCTACAAGGTACTGTTTCTATTTTTTGATGAAGTTGAGGTCATTTGATGACTTATCTCGACATAATAAATAATATGGCTAAGTCGTGTCCTGAATAGTAAATATATACAACAGTGAATCCTCAAACAGAGTAGTGCCATTGGCCAGAATAAGTGACAACCTTTATTCAAGTTAAGACTATATTGTCAATATCTTCTCTCTCTCTCTCTCCCTCCCTCCCTGGTATGAATTAAAAATATTTATGAAAAATTATCACCAGATCGCCACTTCTCTATTTCCTACGATGCATAAATACTTTTTCTCTTGCCGTTCTTAGAGAATCCGTTGACTTTCACTCTAGCTTCATAAGTCATAACTAAGACTATCTATAACATCACCTTTAGGAAATTTGTTTTGTCAATGTACTGGAAAGCCTTTTTCACATTCCTGTTCTCTGGTCTTTGATTCTCACTTATTCTTCCATGGTTGGGTGATCGGTGATTGATGACATGAGTTCATATTTTAATTTTTGAGCATATTAATGACCAGATATACAAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGGTTATTGCTCATGTTTTCCATTCATGTGTTGATAACTGATAATTTTTTATCTTCTCGGCTAGCATTTTCCTTTTTGGTGGAGTTTGGTCCTACTGTCTGGGATCTTACACATCCCAAAGTATGGTGGAGCAGTAATTCTTAGTTTTAAACTGTTGTGGCAAGTAATTTTTAAAAGATATTCAAGGTCTATGATTGCCCTTTTGTGAATAGAATTCGATGTGGCTGTCACTTTTTAAACCGTTGCAAATATGGTGGAACAATAATTCTCAGTTTCTCCCTCCTACTCCTCATGGTTTACAGTACTGCCAACCACATTGTATTAGCTTGCATACTTTCTCCTTTGTAAAGATTGTTACATCGAGGAACAAATGTGGTTGGCCTGAAAGAGTGACTGAAATTTAATACACTATTCAACTTCAGTTTTACATTCTTACTTGGTCCTTCGTTCAGTTCACTCTCTTAGATGCATTATCTAGCTAGTCTTCTCTCTCTTGTTACTGAATGGTGGCACGTAACCATTAGCTGCATTTTCATCCATTACTTTTTTGGTCCTGTGATCTGTCCAAATTTTTATTTCATATTTTAATTGTGGAAGAGAGAAAGATGTTAGATGTCTAGGAGTTGTCTCACTGACATTCTCTCACTATTACAGCTCAGGGAAAGCATTTCTCAAGATCAGGAAAAAACAGAATCTGTTAAAAGTCAAATGCAGGAACTGGAGAAGAACATCCAAGATTTTGATGCCAAAATTCATCATGCTGAAACACTCCTGAAAGATGTGCGAAAAATACAAGATCAGATATCTACTAAGACTGCCGAAAGAAGCACATTATTTAAGGAGCAGCAGAAGCAGTATGCTGCTCTCGCTGAGGAAAATGAAGGTCAGTTCTAGTTGGAGCAGAATAAGTAGTTCAAGGTTCTTAATGGAGTAGTAGGAACTTGATAAAGAACTGGGGGGGACTAGGATCCTTTGCTTAGTTTATATGGAGCAAGCAATTACTTAATGCCAATATATTCAATCATTAAAAATGCTTAAGAGTGGTTGGATTTGTTTGTTTCATTGTTTGGATTTGGTATTTAAAGCATCAAAGTGGTTTTCTTTGCTCTTCCTAATTTAGGTGCAAACCTGTTTTGTATTTTTTACAATATCATTGTGTTGCTTTCATTTTATTTTCCTACTTAGGAAAAGGATAAAAGAGAAACTAATTCCCATGAGAATTTAGGGGGCACTGTCTTCTGAAATTTTTGTTGTCTGTATATTACTAATTTATATAGTTTCTTTCCTTCGCCTGGTGACATCATCACATTTTTATCTTTCTCACTATAGTCTTCAGTCTGTTGATTTTTCTTTTTGGTTGTGGGTTTCCTTCTAATTGACCTATCTCCATTTTGTAGACACTGATGAAGAGTTGAGGGAATGGAAAACCAAGTTTGAAGAAAGAATTGCTATTTTGGAGTCTAAGGTAAGTAAGTTGGAGAGGGAGATGAATGACATGGAGACAAAAAGTTCCTTTCTTAAGCAGACAATTAATGAATATATATGGGAGATTAGCAAGCTTCAAACAGAAGCCGAGGTCAGTCATCTTTTCCCAAAATTTTAACAATTCTGTCCCTGCTTTTTCCCACAAAAAAGAATGGGTATGCATTGCCTTTAAATGTAGAAGGTGACGCCTCAGTACTTCTGGAGCCAACATCTGGAATTGTTTAACCTTTCGACTCCAGGTGCACATGTCATTGAAGAATGAACGCGATTCTACTATCCAAGAACTTTTTGCCAGACATAATCTTGGTTCTGTGCCAAATACTCCTTTCGGTGATGAAGTTGCATCCAACCTAACCAATAGAATAAAATCAAGACTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGGTAGCTTTCTTGCTTTCAATTGACTTTATTTTATCTAAATTGGAGAATGATTTAGTATAGAACCTGTTTGTATCTCTCTCTCTCTCCCGCAAAAACCTTTTCTTGAGAACCAATATACTAAGGGAGATGGAATTGCAGATTTCAAATGATGTTGAACTGAAGACAGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATATCGAGGCCCAAAAACATGCTAAAGCAGACATTAAAGTATGTTTGAAACTTCAAAAAAGGAAATTTCAACTATATGTTGTTTATTCTATTAATTGACCTTATGCAGAGAGGAATCGTGAAAAGAATTGAAGAGAAGGAGAGCGAGCGTGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGGTAGGTAGTAGTTATCCTACTTCAGATTTTTCAAAAATTGGAATTGCACAGTTCCTTTTGGAGGGATAGACAGAGATGATCCATATGGACATCATCTCTTGGTTATTGCAGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAAAGTGAACTATATGGCATTGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGATTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCGGAGTTAGATAATCATAAAAAGAAGCATAGAAAGATGTAAGTGAAGTATCTTTTTCTGGCCTATGTTTCATGGCATGTCAGCTTCTAACCAAGGGTTGAACAAAATGGTGAAGGTATGAGGATGCAACCAAGTTGAGTTTAAAAATTTAAATCTTGGACTAATTTTGTGGGGGTACTGTGAATCTCATACCTTGCCGAATTGTCAAAGTGTTATAGGCCAGTGGTATCACTATTAATAGACCTGGTCAACGTTGAGTGTTTGGGAGTTTCTGCATAAATAAGTTTTGTCAGCTTCAATCACGGATGTTTATGTTTTTTGCTTTCCTCTCCATATTTGTTTCTTCAGAATTGACGAGTACAAGGACAAAATTAGAGGAGTGCTGAAGGGGAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGTTCTTCTAGTTCTAGTCTCAATACCTTTCTGCATCTATTTGAAGAATAATTCTATAGTTGAATGCTGTCTGGGGTTTGCTGATGATTATTTTGTTTACTTCAACCGATGAATCGGTGTTACAAGAGATATCTCTAACCTGTTAAAATAAAGAACAGTGGAACAATATAGACCATACCAATGTATCTATAATTAAGGATCACATGAGCGGCATGGAATTTGTTCAATTTCATATCTATCCTATTACATTCTATGTCATCGTATTTGTGGAATGCATTTTAAGATGATGGTTCTCTTTACACATTGTTTACAGCTCGTGGATGGAGTTGCTATGCTATAATGTGTTATTCTTGGAATTGTGTTCTTAACCTCACATAGATGTGTTACACACACACAAACACGAATTTAATTCTCTCTTGCAAAGACATAATATCCTCCTTGGTAGAATATTAGGTTCTGCATTAAAGCATTGGCCAAATGAATTGCCTTAGTTCTCAAGATTGTAATATCTGTACTTGCATTATCCATCATTTTTTAGTCCCATATTGACTTGATCTCATTCCCCCTTTCTTCTTTTTTTAGCTTCTCGAATTGGGATGTTTTCACAAATTCAGTCTTAATTATAGGCTAACATCTCTAGTCTTGGGGCGATTATGTTTAGCATAAAAAAGATTGGTCTTGTTGGGATGATTCAATGGAATGAGCTTTATATTCTTTGCAACAGGCATGACCTTACCTTCCTTCCAAAGAGCAAGCTTAATCTTCTTTTCTCTTATCTCAGGGCTGTTGGTATGGAGTATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTTAATTACAACCTTTCCAGATATCAAAAGGAAATGGAGTGTGAGTTTTCCTTCTTGGCAGTATTTTAGGAATGATACCATTCTTAAATATTTTCTCTTCATTCATATTTTTAGATGTTTGTTATTGAATTATTGTTACGTGAATGGTTTTTCTACTTTTGTTTTATTTCATTCTTATTATGTTGGTTTCAATATGTTTCTTGTTGATGTAAGGAGAATTAGGGAAATAATGGTTAATCTTGGGTAATTCCATGGTTAATCCTTTTTAGTTTCTTATTTGGATTATAATTCCTTTTCTGTTTCCTTTTAGGATTTTATTCTCCATAAATAGGAGTCCCCTCTCATGTAGTCTTTATACTTTGACTGATAATAAAGATTCTTAAGCTTGATTCTTGGAGAGTGACTGAGGCTACCTAGCCATCATGAATATTTAAGCAACGCATCAAAGTAACCTGATAAAAGAAGTTCAAGTGTCTAATATTTGGAGAAAAAGGCTCTCATAAGATGGCTTTTATTTACAGTTCTAATGAACTGGAAGTATTTGAGTTGTAAATCTTTTAGCTTTCCTCCCCGCTTTCTCAATCTCACTGGATACCACCATTTTTTGTATATAAGATTGTTTGATTGCAAACATCTTTTCCATCATTTGTTTTGATGCAGCAAGAAAGAGATTTGTTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTATATCTCAAGGCTCTGGAAGGGGCTAAGGAGAAAAAAGATGTGCAAAAAAGGTTACAGTCGTGGCCTTGAACTTCACGATGCTGCCATTTTTGAGATTTTAATTTCTATTGATCTATCTTCTCTCCGATGACCATTCACAAGGTTTTTGGTGCATTATCTGCAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTTGAAAGAGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGTCCCTTCACAGCAGAAGAAGAAGACGAATTTGTTAAAAAGGTTGAAATACTGTATCATTCGAACCCTCGATTGTTTTTTCCACCTGAATCCTCTTATGCTTTTTCCTCCACATTTTCTCTTATGATTTACTCTGCTATATCTCTAAGTTGTTCTTGTTCTTCTCTATTTTGGTATATTTCTTTAATGCAAATTGTATCAAATAGGAGAAAGTTCTTCACTTGAATGTTGCTTTAACTCAGTGAGTTATTTCTATCTACGTAAAGGCTCTTTATTTTTTGATGTTTGGTTGGTCTTTTCTAATTTCAGCAAAGAGTGAAGGCTGCAAGTTCCGCTGAGCATATGAAAGTGCTTGCAGTGGAGTCTTCAACGGCTGACTCCCATTTTCAGCAACTGGATAAGCTCCGCATGGTATTTGAAGAATATGTCAAACTTAGCAATGAAACAATTCCTAATGCAGAGAAAGAACTTCATCAGCTTAATGAAGAGCTGGATGAAAAGTCACAGGCCCTTGATGATGTAATTACTTTTATATGCTGCCTTTTCTTCTTCTTTCACTAAGGAAGAATAGAAAATATTGAAACTTAAGATATTCAAATGATTACTTTCTTTATTCTTCTTTCTAGTATTGAGAATTGACTTTATGAAAGAGTCCTGAATCCAGGTTAGCCAATTTTGCCTGCTTGGCCGTGGTCTTTTAGACAGGAAAAGTTTGTGTCTACGAAAGCCTCCAGCCACGTACTAAGAAAGTTTTTCGGTTGAAGGAGATTTTCGTCATAGAATTAAATTTCCTTTTCTAGAGGAAACAAATTTCGTTAAGATCTTTGTCTTAGAATTAATTTCTTTTCTTAGAGGAAATATAATTTGATCAAGATCTTTGTCATGAATTTTTTAATTCTTTTTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTTGTTTTTTTCTTTTTTGGTTTTTTTTCCTTGTGGAAGGTTCCCAAATGGGTAGGGTTAAAGTCTTCTTTCAATTCAGTTGAATAGATGTCTCTTTTTACCTGTAGGTGGTGGGTGTCTTAGCTCAAGTAAAGGCTGACCGGGACTCAGTTGAGAACTTGGTGCAACCAATTGACACTGCCGACAGGCTTTACCAAGAAATTCAAACTTGGCAAAAGCAAGTTGACGACTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACATTGGAAGAAATTCAGTCGGAGCTGAATGCATTGCAAAACACCAAGTAACAAACTCACTTGATGTTATATATTTTTTGTAAATTTATACTTGAAGTTCTAGAGTACGCAAAATTTTCATGTTTCCACTCTTTGCATTTCCAGTGTCACTCACGTTATTAGTTTACCCTTTTAGTCAACTGCTAAGTGCTTGTAGCTGTTTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTGGTCTTCTCTTTCATAGATCTATAGAATGACTTGTGCTTTTTGGAAACAGAGATGGTTTACACAATGAACTGGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGGCCAACATTCAGATAAGGTGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATGTTAGGAAGGCAGAAGAAGAGTTGGACCGTCTGACTGAGGAAAAAAGTCAAGTTGATCTTGATGAAAAGGTAATTTTTTTTTCTTGCTAGAAAACAAGGAAAAATATGAATGAGTGAAACAAATTTCAAAGGTAAAAGAGGTCAAGCAGTTCTCTTAAAAGAGGTTAAGCAAAAAACTTGTCCATCCAAATGCGAGGTAGAAGAACCAAAGTATAAAAAGTTATTCTCTTACAGTCAGCGAGTGAAAAAAAAATCCATTGCCGACAGCATTAACACCTGTGGTTCTTTATAAAAATTCTTGGTTTTCTCCAAAAGAAAAAGTTCGATGTGAAGTAGAAAGGGAAAATTTCTTTTTTCTTTCGGTCTGCTTTGCTCCCACAAATATTCTCAGAAAAGAGAGAATAACATATCTCAGGAATATTCTAGTATATGTAAAACAGATGTAGAAATTTTCTTGATAGCCTGTAAGCAAAATGATTTTGGGAGAATTAGGTTAGTCTTGGATAATCCTAGGTTAATCCTCTTTTACTACGTTTTTGTGTATTCATTTTCTACAAATAGGTTATAGATTTTGATTCTTGGGTAATTCCAAAACTTAATTCATAACGAAAATTTCTGGACTTTGATTCTTAGAATTCTCCCTTTGACATCACTTAGGCTACACCATTTTGGTGTTAGATCTCTTTGAAGCAAGGGCCTGATGGCTGGCAGAAACCCATCCCTCAACTCAGTGAAGATGCCATTTAAACCAGCCAAAAACCCATCCCTCAACTCAGTGTTTTATCCCTTTGCATAGTGACCATCCGTGTGCTATGGGTCGAAAGTACAATGAAGCAAATGAAGAATGAAATTCAGGGGATATGAAAGATGATAAACACCACATTTTGTCAAATGAAAATCTTAACCTTCCTCAAGATACTAAATTTCAAAATCATCTTAATCAACCGGGCTTTAAGCTTGTGGGTGGTTTTAGTGAGTTTGTGGAATGCCAAACAGGTAGAGAAAACACAAGAATTTTCCAAAGACGAATGAGCTCTATCAATATCGTCCCCCACTTTGATAGCATCAATCATCGAAAGAAGGCCCAACCTACTTTCAAACTCTCTATCTCTAATTCCCCTCCAGAAGCCAAGATCTCAATTTCCAATAATCAGTGACCGCTTGCGAGAAATGAGGAAAAGATCCAGAAAACTTTCCTTCAAAGGCAAAGCTTGTAACCATCGGTCATGCCAAAGTTTGATTTTCGCCCCATTGTTCACTCCAAACTGAAAGAAGCTCAAGAATAAAGTACTGTTCTTAGGTATCTCCACCCAAGGTCTAGCTCCACTGACCACCAAACCCCATATTGGAGAGGGAGAGATGTTCAGCTCCACTTAACTAAGTGACTACCTGAACAAAAGGCACCACTCGTCCAGATAAAATCTCTCACTAGCTTCTCCATAACATTGATCACCATATCCGGGCCTTGAAAAGCGAGAAGCTGTAAATTGGAAGGCTGTTAAGGGTAGAGTTTGCTAGTGTAGGCCTTGCAGCTTTTGGAAGAGGAGTATGCTTCCATTTATCAAGCTTAGCTTTAAATTTGTCAGTAATAGGATCCCAAAAGCGCTTCGATTGAAAATTACCTCTTAGGGGCACACCGAAATAATTAGAAGGGAGATCATCTTGCAACCCAACAAAGCAGCCTCCTCACTGCCAATTTCCTCACCTATATTGATGCCTTCTAAAGATGATTTAGAGGTATTTTGGGACAGTCCCACACCATTAGAAAAAATGGTCACAAAGTCCCACCAATTCTGCAGACAGTCTAGATTGTTTGGGCAAAAAATCCAAGTGTCATCTGCAGACTGTAGATGGCTGAGCATGATCTGTTTGTTGCCCACTCGGAACCCTTCACCTGTTTCTCACAACAATAGTGAATAGAACAGCTGAGAGTGTCCCCAATGATTGTAGAAAAGAATGGAGAAATCGAATCCCCTTGTCTAATCACTCTTTCAGCAAAGAATTTACTTTTTGGACGTCTATTATTTGGAATGGAGAAGTTAGTATTATTATGAAATAAAAAACCCTTCACCCACCTCCTCCATCTTTGGCCAAACCCTGAGTTCAAGAATGGCATCAAGATAGACCCAGTTGATCTTGTTGTAAGCTTTTTCCAGATAATGCTTCAGAAGGGAACCCTCCTTCAAAACCTCACACCCACATTTGTCCTGCTTCTCGTTATACGTAGCAAAATAAAATATAAAATTAAACAGAAAAATGCAAAGGTGAGTTAGTTTTATGTAACTCTTTAACATGCCCTGGGCTAATTGTAGGACTAAGTTAAGCTGTAGAACAGAGGCAGTTGGAATATCAATGCGAATAAAATGTCATGGTCATGGAGAATGATTATTCTGAAAGTTTCTGATTGAAGATCATAATTTCTTTCTTCCTTTCTTTGTTTTCATCTGGTCTGATTTTACCTTCCCAGTGTTTCTAATTTTGTTATAATGATGTTCTTTCCTGCACTTGCAGCATTTGGCAGAAGCCCTTATCCCTTTATCAAAGGAAAAAGATAAATTGCTTAATGACTACAATGAACGAAAAGATAAACTTAATTGTGAATATGAGGAGCTGGGTGAGAAAAAGAGGAAATTTCAGCAGGAAGTTGAGACACTTCTTAGAACAACTTCCAAGATTAAAGAGTACGTTCACTGAGTTTTAGAGTGATCTTAAATGTTCTTTCATGCCTTCAAAGCTGATGTTTGGTTTTCAGGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTGCAGGAAAAGAAGGCTCAGGCTGAATCTCAACTTCAAGGTTGTGACAGTAGGAAGCAGGAAATATTGGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGATAACTTGAACTACCGGAAAACAAAAGCTGATGTTGATGAGCTTGCCCGTGATATTGAATCATTGGAAGAGCAAATTCTAAAGATTGGAGGGGTTTCGACCGTTGAGGCTGAAATAGGAAAACTGTCTCAGGAAAGAGAGAGGCTATTGTCTGAGGTTCTTCTATTCCTCTGCTTACAAATATGAAATCTTATTTTTCTTTTCCATCTAGGCTGTGCATCCAATTAATATATAAGCGATATGTGTTACGTTGACACACAGGACTTTAATATTTGGAATAACAGGATTTGTTGTCGTAATCGTCAATGGATAATTTTTTTGAACTGATCAATGTGGAGACTGCTGAATTTGTGAGGTGGTAAAAGGGCAAGGCCAAATAATTCTTGAGTTGGGGGAATGAAGAATGAGACTGAACTATTTTGTGAATTACATTAAAAAAAGCAGACATTTACTTTTCTTGGGCTAGAGAGTTTTACTTCACTTGAGTTAGAGCAACATTGGTCTGATAGAGTTAGAATGCATTTGCGATTTGTCCATCAAAGACGGTCAATTCATTGGGTAGTTCTGTATCACTGAAGCTAAACTTTTGTTCTAACACCAATAATGTATGAAGTTTCCAGTTAAATACTGATATGTATGTTAGTTAATCTTGTGAATTGTGATATTTCAATTTGAATTTTAAACCCTGTTGATTTTGGCAATTTCTTAGTCTATTTTCTATGTTGCCTTGATCTTTTCTAACTTCACAAGTTTTCTCCCACTCATTACTCATTCGTTATATATATTTTCTGAATGGTTTTGTGTATAAATCTTGTAACAGCTAAACAGGTTTCATGGGACAATGTCAGTCTATCAAAGCAATATTTCAAAAAATAAAATTGATTTGAAACATGCGCAATATAAGGACATTGACAAGCGGTATTTTGATCAGCTAATCCAGCTTAAGGTTAGATTTTTTTTTTTCAGCTGCTAATAGGTTCATCTTTCTAATTTGGTTCTACTGATAAACTTAAGATTTAATGACAGACAACTGAGATGGCAAACAAGGACTTGGACAGATATTACAATGCCCTTGACAAGTGAGCTTCTATTATGAGTTATAATTTTGATTTCTTTTACATATATATATATATTTTATTGGCAACAAATTTCTTGCTATCCTTCCTCGTTATCATCTCATGTTTTAACTGATGATGAGTTCCCATTTTCCCGTAATCATTCTTTGTTACCCAACAAGTCTGAAGTTGGAGACAATTTTAAAAAATAATTAACGATTTCTATGTTGGTGCATCATATTCACTATTAAAATGTTATGAAATAATTATTTTCTTTCTCATTAAACTTGCTACTCAAATTATTCTCATAATTTCTGAGCTCACCTACCTCCTTAGAGTTCATAGGCAAGCGGAAACTATATTCAGGCCTGTTACTGTAAATTTTTTTAGCAATAGAAACCCATAGATATTCACTGTTATATTTATAACTTCTAATATGCAATAAATCATAATAAGTTGTTTTAAGGAGAGATGAATATTCAGCAGTTTGGTTCGTTCGTCCATATTTTCTCTGGCAGGATATATTAATTTGAGTCCTGTTATTTTCTTTATTTATATTTGTATCCTGTGACTTCTTTCCAGAGCACTCATGCGCTTTCATACCATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCACTCAGATTCAGAGGGTGCAGGAACTCGTTCATATAGCTACAAGGTCTGTTAGCTTTCTATTAGCCCAACTTTCTATACCTTTGGGCCAAGATCAAGTGCTTTAGCAAAACTTTCTTTGTTATTATTCTTCTTTACTATATATTCAATATTAGCAGTGTATACTTTTCAGGTTCTCATGCAGACTGGAGATGCAGAACTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTAGGGTCCAATTCAATTCCTCTACTTATTATTTGCCCTTTTTCCTTTGAAGAGTTAATATTAATATTGTAGTTACAGGTTCTTGCTTCTCTTATAATTCGATTAGCATTGGCTGAAACGTTCTGCCTCAATTGTGGAATACTCGCTCTAGATGAGCCAACCACTAATCTAGATGGTCCAAACGCCGAAAGTCTTGCTGCAGCTCTTCTACGGTATCAATATATTTATACAATCATTTTATTTCATTTTGATTCAGTTTTAAATGTTGAGTTCCAACCCAATAAAAGAACTATGCTGTTGACTGTTAAGAAACTAGACCCTATAATTGAGCCGAACAAAAAATCACCTGTGCAACCAAACATATGTTAGGTATGATTCGATCTTTTTCTGCAGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATCGGTCAGAGACAGCATGCTGAGAAATATTATCGTGTTACGAAGGACGACCAGTAAGGCTCTTACTATATATGCATCAATTTGGTGTATTTGTGTTTGTACAGATTTTATTCTCATTTTGGTTGGTTGTCATTTGGTTTTCACCTAATTCTTCTCATTACTAACTTGTCCAATTCTGTTTTACAGCCAGCATAGTATAATAGAAAGCCAAGAGATATTTGATTGAAGCCATTTGAACTTCAATTGAATTTGAGTAGCTGCAACCTAAAGCATGGGTTTGTGTGGAAACAGGTCAGTTAATAACAAACCAAAGAGTTGACTATGCTGTTGCTTCTAAATTACTGACTTATATTGGTTGGTTCCAATTGGTTTCACAAGTTTAACTCTCTTTGGAAGCCAACTCTGATAACTTGGAAGCCAGACATTCTTCCTACCTAATAACATGTGTATACATACCCACATGTGCATGCATGTATGATTATATAATTTTGTTTTGTTGTGAAAATTTTAACCTAGTTATTTCATGGAGGTAGGATTAGGATAATTTAGGTGTATCTCTAGGTTAATCCATTTTACCTTTATTTGTGTATTAATCCCTTGTAAATAGGGAGTCCTCTCGTGTATTTGACACTTTTAATTGACATTAATATTTTATATTGTATGGTTTGATTCGGGGAAA

mRNA sequence

GCGACATCTGTTGGTATCGTAAGGACAAAGCTAGCGAAACCATGGCGACGAAGCGATGAACTGATACTCTACGCATGACGACGAAGTGAAGTCCGCAAGCTTCTTCTGAAGCGTCTTCTTCACTGCCAGCATTCTAAATACCGAACCGAGTTTTGAGCCCTTTTCGATTCTCAGAGTGAGAATTTAAAACCCCTTTCCCGCCATGGTTGCAGTTGTTTATCGGTGAAACTTTTTCGTACGATCGTTGTCCGTGGAATTTGCGCACTCTGTATTTTGAAAAGAATTTTCGGATAGCAGGGAAAAGTAGTAAAGATGAGTACAGTGGACAAGATGTTGATAAAAGGTATTAGGAGTTTCGACCCCGAAAATAGGAACGTCATCACCTTCTTCAAGCCATTGACGCTGATCGTTGGCCCTAACGGTGCTGGGAAAACTACCATAATTGAGTGCTTGAAGCTCTCTTGTACCGGCGAGTTGCCTCCCAATGCGAGGTCCGGCCACAGCTTCATTCACGACCCTAAGGTTGCAGGAGAGACAGAGACAAAGGGACAAATCAAGCTTCGGTTTAAGACAGCTGCAGGTAAGGACGTGGTTTGCATAAGGTCATTCCAACTTACTCAGAAGGCATCCAAAATGGAGTATAAAGCAATTGAAAGCGTGCTTCAGACAATAAATCCACATACTGGAGAGTTGGTGTCGGCGGTATTTCTAGAGGATGGAAATGAAAAGCTAGTGGACAGTCCAAGAAATGACAAATTCTTCATGATGAATGTGGGGAAAGTTTGTCTGAGCTATAGATGTGCAGACATGGATAGGGAGATTCCTGCGTTAATGGGTGTGTCAAAGGCTGTTCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCCAACTGGCCATTGCAAGATCCTTCGACACTAAAGAAGAAATTTGATGATATCTTCTCTGCTACAAGATATACAAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGCTCAGGGAAAGCATTTCTCAAGATCAGGAAAAAACAGAATCTGTTAAAAGTCAAATGCAGGAACTGGAGAAGAACATCCAAGATTTTGATGCCAAAATTCATCATGCTGAAACACTCCTGAAAGATGTGCGAAAAATACAAGATCAGATATCTACTAAGACTGCCGAAAGAAGCACATTATTTAAGGAGCAGCAGAAGCAGTATGCTGCTCTCGCTGAGGAAAATGAAGACACTGATGAAGAGTTGAGGGAATGGAAAACCAAGTTTGAAGAAAGAATTGCTATTTTGGAGTCTAAGGTAAGTAAGTTGGAGAGGGAGATGAATGACATGGAGACAAAAAGTTCCTTTCTTAAGCAGACAATTAATGAATATATATGGGAGATTAGCAAGCTTCAAACAGAAGCCGAGGTGCACATGTCATTGAAGAATGAACGCGATTCTACTATCCAAGAACTTTTTGCCAGACATAATCTTGGTTCTGTGCCAAATACTCCTTTCGGTGATGAAGTTGCATCCAACCTAACCAATAGAATAAAATCAAGACTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGATTTCAAATGATGTTGAACTGAAGACAGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATATCGAGGCCCAAAAACATGCTAAAGCAGACATTAAAAGAGGAATCGTGAAAAGAATTGAAGAGAAGGAGAGCGAGCGTGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAAAGTGAACTATATGGCATTGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGATTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCGGAGTTAGATAATCATAAAAAGAAGCATAGAAAGATAATTGACGAGTACAAGGACAAAATTAGAGGAGTGCTGAAGGGGAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGCATGACCTTACCTTCCTTCCAAAGAGCAAGCTTAATCTTCTTTTCTCTTATCTCAGGGCTGTTGGTATGGAGTATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTTAATTACAACCTTTCCAGATATCAAAAGGAAATGGAGTCAAGAAAGAGATTTGTTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTATATCTCAAGGCTCTGGAAGGGGCTAAGGAGAAAAAAGATGTGCAAAAAAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTTGAAAGAGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGTCCCTTCACAGCAGAAGAAGAAGACGAATTTGTTAAAAAGCAAAGAGTGAAGGCTGCAAGTTCCGCTGAGCATATGAAAGTGCTTGCAGTGGAGTCTTCAACGGCTGACTCCCATTTTCAGCAACTGGATAAGCTCCGCATGGTATTTGAAGAATATGTCAAACTTAGCAATGAAACAATTCCTAATGCAGAGAAAGAACTTCATCAGCTTAATGAAGAGCTGGATGAAAAGTCACAGGCCCTTGATGATGTGGTGGGTGTCTTAGCTCAAGTAAAGGCTGACCGGGACTCAGTTGAGAACTTGGTGCAACCAATTGACACTGCCGACAGGCTTTACCAAGAAATTCAAACTTGGCAAAAGCAAGTTGACGACTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACATTGGAAGAAATTCAGTCGGAGCTGAATGCATTGCAAAACACCAAAGATGGTTTACACAATGAACTGGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGGCCAACATTCAGATAAGGTGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATCATTTGGCAGAAGCCCTTATCCCTTTATCAAAGGAAAAAGATAAATTGCTTAATGACTACAATGAACGAAAAGATAAACTTAATTGTGAATATGAGGAGCTGGGTGAGAAAAAGAGGAAATTTCAGCAGGAAGTTGAGACACTTCTTAGAACAACTTCCAAGATTAAAGAGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTGCAGGAAAAGAAGGCTCAGGCTGAATCTCAACTTCAAGGTTGTGACAGTAGGAAGCAGGAAATATTGGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGATAACTTGAACTACCGGAAAACAAAAGCTGATGTTGATGAGCTTGCCCGTGATATTGAATCATTGGAAGAGCAAATTCTAAAGATTGGAGGGGTTTCGACCGTTGAGGCTGAAATAGGAAAACTGTCTCAGGAAAGAGAGAGGCTATTGTCTGAGCTAAACAGGTTTCATGGGACAATGTCAGTCTATCAAAGCAATATTTCAAAAAATAAAATTGATTTGAAACATGCGCAATATAAGGACATTGACAAGCGGTATTTTGATCAGCTAATCCAGCTTAAGACAACTGAGATGGCAAACAAGGACTTGGACAGATATTACAATGCCCTTGACAAAGCACTCATGCGCTTTCATACCATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCACTCAGATTCAGAGGGTGCAGGAACTCGTTCATATAGCTACAAGGTTCTCATGCAGACTGGAGATGCAGAACTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTTCTTGCTTCTCTTATAATTCGATTAGCATTGGCTGAAACGTTCTGCCTCAATTGTGGAATACTCGCTCTAGATGAGCCAACCACTAATCTAGATGGTCCAAACGCCGAAAGTCTTGCTGCAGCTCTTCTACGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATCGGTCAGAGACAGCATGCTGAGAAATATTATCGTGTTACGAAGGACGACCACCAGCATAGTATAATAGAAAGCCAAGAGATATTTGATTGAAGCCATTTGAACTTCAATTGAATTTGAGTAGCTGCAACCTAAAGCATGGGTTTGTGTGGAAACAGGTCAGTTAATAACAAACCAAAGAGTTGACTATGCTGTTGCTTCTAAATTACTGACTTATATTGGTTGGTTCCAATTGGTTTCACAAGTTTAACTCTCTTTGGAAGCCAACTCTGATAACTTGGAAGCCAGACATTCTTCCTACCTAATAACATGTGTATACATACCCACATGTGCATGCATGTATGATTATATAATTTTGTTTTGTTGTGAAAATTTTAACCTAGTTATTTCATGGAGGTAGGATTAGGATAATTTAGGTGTATCTCTAGGTTAATCCATTTTACCTTTATTTGTGTATTAATCCCTTGTAAATAGGGAGTCCTCTCGTGTATTTGACACTTTTAATTGACATTAATATTTTATATTGTATGGTTTGATTCGGGGAAA

Coding sequence (CDS)

ATGAGTACAGTGGACAAGATGTTGATAAAAGGTATTAGGAGTTTCGACCCCGAAAATAGGAACGTCATCACCTTCTTCAAGCCATTGACGCTGATCGTTGGCCCTAACGGTGCTGGGAAAACTACCATAATTGAGTGCTTGAAGCTCTCTTGTACCGGCGAGTTGCCTCCCAATGCGAGGTCCGGCCACAGCTTCATTCACGACCCTAAGGTTGCAGGAGAGACAGAGACAAAGGGACAAATCAAGCTTCGGTTTAAGACAGCTGCAGGTAAGGACGTGGTTTGCATAAGGTCATTCCAACTTACTCAGAAGGCATCCAAAATGGAGTATAAAGCAATTGAAAGCGTGCTTCAGACAATAAATCCACATACTGGAGAGTTGGTGTCGGCGGTATTTCTAGAGGATGGAAATGAAAAGCTAGTGGACAGTCCAAGAAATGACAAATTCTTCATGATGAATGTGGGGAAAGTTTGTCTGAGCTATAGATGTGCAGACATGGATAGGGAGATTCCTGCGTTAATGGGTGTGTCAAAGGCTGTTCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCCAACTGGCCATTGCAAGATCCTTCGACACTAAAGAAGAAATTTGATGATATCTTCTCTGCTACAAGATATACAAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGCTCAGGGAAAGCATTTCTCAAGATCAGGAAAAAACAGAATCTGTTAAAAGTCAAATGCAGGAACTGGAGAAGAACATCCAAGATTTTGATGCCAAAATTCATCATGCTGAAACACTCCTGAAAGATGTGCGAAAAATACAAGATCAGATATCTACTAAGACTGCCGAAAGAAGCACATTATTTAAGGAGCAGCAGAAGCAGTATGCTGCTCTCGCTGAGGAAAATGAAGACACTGATGAAGAGTTGAGGGAATGGAAAACCAAGTTTGAAGAAAGAATTGCTATTTTGGAGTCTAAGGTAAGTAAGTTGGAGAGGGAGATGAATGACATGGAGACAAAAAGTTCCTTTCTTAAGCAGACAATTAATGAATATATATGGGAGATTAGCAAGCTTCAAACAGAAGCCGAGGTGCACATGTCATTGAAGAATGAACGCGATTCTACTATCCAAGAACTTTTTGCCAGACATAATCTTGGTTCTGTGCCAAATACTCCTTTCGGTGATGAAGTTGCATCCAACCTAACCAATAGAATAAAATCAAGACTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGATTTCAAATGATGTTGAACTGAAGACAGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATATCGAGGCCCAAAAACATGCTAAAGCAGACATTAAAAGAGGAATCGTGAAAAGAATTGAAGAGAAGGAGAGCGAGCGTGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAAAGTGAACTATATGGCATTGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGATTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCGGAGTTAGATAATCATAAAAAGAAGCATAGAAAGATAATTGACGAGTACAAGGACAAAATTAGAGGAGTGCTGAAGGGGAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGCATGACCTTACCTTCCTTCCAAAGAGCAAGCTTAATCTTCTTTTCTCTTATCTCAGGGCTGTTGGTATGGAGTATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTTAATTACAACCTTTCCAGATATCAAAAGGAAATGGAGTCAAGAAAGAGATTTGTTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTATATCTCAAGGCTCTGGAAGGGGCTAAGGAGAAAAAAGATGTGCAAAAAAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTTGAAAGAGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGTCCCTTCACAGCAGAAGAAGAAGACGAATTTGTTAAAAAGCAAAGAGTGAAGGCTGCAAGTTCCGCTGAGCATATGAAAGTGCTTGCAGTGGAGTCTTCAACGGCTGACTCCCATTTTCAGCAACTGGATAAGCTCCGCATGGTATTTGAAGAATATGTCAAACTTAGCAATGAAACAATTCCTAATGCAGAGAAAGAACTTCATCAGCTTAATGAAGAGCTGGATGAAAAGTCACAGGCCCTTGATGATGTGGTGGGTGTCTTAGCTCAAGTAAAGGCTGACCGGGACTCAGTTGAGAACTTGGTGCAACCAATTGACACTGCCGACAGGCTTTACCAAGAAATTCAAACTTGGCAAAAGCAAGTTGACGACTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACATTGGAAGAAATTCAGTCGGAGCTGAATGCATTGCAAAACACCAAAGATGGTTTACACAATGAACTGGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGGCCAACATTCAGATAAGGTGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATCATTTGGCAGAAGCCCTTATCCCTTTATCAAAGGAAAAAGATAAATTGCTTAATGACTACAATGAACGAAAAGATAAACTTAATTGTGAATATGAGGAGCTGGGTGAGAAAAAGAGGAAATTTCAGCAGGAAGTTGAGACACTTCTTAGAACAACTTCCAAGATTAAAGAGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTGCAGGAAAAGAAGGCTCAGGCTGAATCTCAACTTCAAGGTTGTGACAGTAGGAAGCAGGAAATATTGGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGATAACTTGAACTACCGGAAAACAAAAGCTGATGTTGATGAGCTTGCCCGTGATATTGAATCATTGGAAGAGCAAATTCTAAAGATTGGAGGGGTTTCGACCGTTGAGGCTGAAATAGGAAAACTGTCTCAGGAAAGAGAGAGGCTATTGTCTGAGCTAAACAGGTTTCATGGGACAATGTCAGTCTATCAAAGCAATATTTCAAAAAATAAAATTGATTTGAAACATGCGCAATATAAGGACATTGACAAGCGGTATTTTGATCAGCTAATCCAGCTTAAGACAACTGAGATGGCAAACAAGGACTTGGACAGATATTACAATGCCCTTGACAAAGCACTCATGCGCTTTCATACCATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCACTCAGATTCAGAGGGTGCAGGAACTCGTTCATATAGCTACAAGGTTCTCATGCAGACTGGAGATGCAGAACTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTTCTTGCTTCTCTTATAATTCGATTAGCATTGGCTGAAACGTTCTGCCTCAATTGTGGAATACTCGCTCTAGATGAGCCAACCACTAATCTAGATGGTCCAAACGCCGAAAGTCTTGCTGCAGCTCTTCTACGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATCGGTCAGAGACAGCATGCTGAGAAATATTATCGTGTTACGAAGGACGACCACCAGCATAGTATAATAGAAAGCCAAGAGATATTTGATTGA

Protein sequence

MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTINPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQDQISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGDEVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIKRGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNMLQMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDHLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD

Homology

[Close]

BLAST of ClCG05G003110 vs. NCBI nr
Match: XP_038891799.1 (DNA repair protein RAD50 isoform X1 [Benincasa hispida] >XP_038891805.1 DNA repair protein RAD50 isoform X1 [Benincasa hispida])

HSP 1 Score: 2397.1 bits (6211), Expect = 0.0e+00
Identity = 1273/1364 (93.33%), Postives = 1282/1364 (93.99%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVKSQM+ELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMEELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTLFKEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARH+LGSVPN PF D
Sbjct: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHHLGSVPNAPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIKSRLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNIEAQKHAK DIK
Sbjct: 421  EVASNLTNRIKSRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIEAQKHAKVDIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGI+KRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIR VLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRAVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LR VGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRGVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN NLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNCNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            STADSHFQQLDKLRMVFEEYVKL NETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  STADSHFQQLDKLRMVFEEYVKLRNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HL EALIPLSKEKDKLLNDYNE KDKLN EYEELGEKKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLTEALIPLSKEKDKLLNDYNELKDKLNREYEELGEKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. NCBI nr
Match: XP_008438322.1 (PREDICTED: DNA repair protein RAD50 [Cucumis melo])

HSP 1 Score: 2393.2 bits (6201), Expect = 0.0e+00
Identity = 1269/1364 (93.04%), Postives = 1283/1364 (94.06%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVK QMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTL+KEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLYKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINE+IWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEHIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIK RLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNI+AQKHAKADIK
Sbjct: 421  EVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKD+MAGDSEDRVKLALKKAELD+HKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDVMAGDSEDRVKLALKKAELDSHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN+NLSRYQKEMESRKRFVESKLQ LDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNHNLSRYQKEMESRKRFVESKLQFLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELN LQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNTLQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVS VEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSAVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. NCBI nr
Match: XP_022980190.1 (DNA repair protein RAD50 [Cucurbita maxima])

HSP 1 Score: 2383.2 bits (6175), Expect = 0.0e+00
Identity = 1264/1364 (92.67%), Postives = 1281/1364 (93.91%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTLFKEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIKSRLVDLDKDMQDKR+SNDVELKTAWDCYM ANDRWKNIEAQKHAKADIK
Sbjct: 421  EVASNLTNRIKSRLVDLDKDMQDKRVSNDVELKTAWDCYMGANDRWKNIEAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIE KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEVKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRLPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN NLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQ LDKLRMVFEEYVKLSNETIP AEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRD+VENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKT+EEIQSELNALQNT
Sbjct: 841  ADRDAVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDL+N+QIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLSNLQIRWHTLREEKVKAANTLRDVRKAEEELDLLTEER 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLL+TT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRKFQQEVETLLKTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEIL ELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAE+GKLSQ+RERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFH+
Sbjct: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHS 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDD QHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. NCBI nr
Match: XP_004133980.1 (DNA repair protein RAD50 isoform X1 [Cucumis sativus] >KGN56710.1 hypothetical protein Csa_010500 [Cucumis sativus])

HSP 1 Score: 2383.2 bits (6175), Expect = 0.0e+00
Identity = 1265/1364 (92.74%), Postives = 1281/1364 (93.91%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVK QMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTL+KEQQKQYAAL+EENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLYKEQQKQYAALSEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            D+ETKSSFLKQ INEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DLETKSSFLKQAINEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIK RLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNI+AQKHAKADIK
Sbjct: 421  EVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGI+KRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN+NLSRYQKEMESRKRFVESKLQSLDP SFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S++DSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQT QKQVDDLVYKLDFRGKGVKTLEEIQSELN LQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLEEIQSELNTLQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSY+VLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. NCBI nr
Match: XP_023527295.1 (DNA repair protein RAD50 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2382.1 bits (6172), Expect = 0.0e+00
Identity = 1264/1364 (92.67%), Postives = 1280/1364 (93.84%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTLFKEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIKELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIKSRLVDLDKDMQDKR+SNDVELKTAWDCYM ANDRWKNIEAQKHAKADIK
Sbjct: 421  EVASNLTNRIKSRLVDLDKDMQDKRVSNDVELKTAWDCYMGANDRWKNIEAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIE KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEAKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRLPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN NLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLA+ES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAMES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQ LDKLRMVFEEYVKLSNETIP AEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRD+VENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKT+EEIQSELNALQNT
Sbjct: 841  ADRDAVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEER 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HL EALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLEEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEIL ELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAE+GKLSQ+RERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFH+
Sbjct: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHS 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDD QHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot
Match: Q9SL02 (DNA repair protein RAD50 OS=Arabidopsis thaliana OX=3702 GN=RAD50 PE=1 SV=2)

HSP 1 Score: 1876.7 bits (4860), Expect = 0.0e+00
Identity = 990/1364 (72.58%), Postives = 1135/1364 (83.21%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPEN+NV+TFF+PLTLIVG NGAGKTTIIECLK+SCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETK QIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDE+NWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQA EIKT+KLKL
Sbjct: 181  LENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESI+QDQE+TES K QM ELE ++Q  DA++H+ E +LKD+RK+QD
Sbjct: 241  ENLQTLKDAAYKLRESIAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLKDLRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            Q+S KTAERSTLFKEQQ+QYAAL EENEDT EEL+EWK+KFEER+A+L +K+ K+EREM 
Sbjct: 301  QVSIKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREMV 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            D ET  S L      Y+ EISKLQTEAE HM LKNERDSTIQ +F  +NLG+VP+TPF  
Sbjct: 361  DTETTISSLHNAKTNYMLEISKLQTEAEAHMLLKNERDSTIQNIFFHYNLGNVPSTPFST 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EV  NLTNRIKSRL +L+ D+ DK+ SN+  L TAWDCYMDANDRWK+IEAQK AK +IK
Sbjct: 421  EVVLNLTNRIKSRLGELEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
             GI KRIEEKE ERDSFE +IS VD+   DEREK +Q+E+ERKT Q +ER FES I QKQ
Sbjct: 481  MGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
             E+Y +E KIK +NRE+D+MAGD+EDRVKL+LKK E +N KKKH+KIIDE KD+IRGVLK
Sbjct: 541  HEIYSLEHKIKTLNRERDVMAGDAEDRVKLSLKKTEQENLKKKHKKIIDECKDRIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKD+K+EI QA                   LR++  EYDDL+ KSREAEK+VNML
Sbjct: 601  GRLPPEKDMKREIVQA-------------------LRSIEREYDDLSLKSREAEKEVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN +L ++ K+ ESRKR++ESKLQ+L   S ++D Y K LE AK+K+D +K +Y
Sbjct: 661  QMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLESAKDKRDDRKREY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            N+A+GMRQMF+PFE+ AR  H CPCCER FTA+EE  F+KKQRVKA+S+ EH+K LAVES
Sbjct: 721  NMANGMRQMFEPFEKRARQEHSCPCCERSFTADEEASFIKKQRVKASSTGEHLKALAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S ADS FQQLDKLR VFEEY KL+ E IP AEK L +  EEL +KS+ALDDV+G+ AQ+K
Sbjct: 781  SNADSVFQQLDKLRAVFEEYSKLTTEIIPLAEKTLQEHTEELGQKSEALDDVLGISAQIK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            AD+DS+E LVQP++ ADR++QEI ++QKQ++DL YKLDFRG GVKT+EEIQSEL++LQ++
Sbjct: 841  ADKDSIEALVQPLENADRIFQEIVSYQKQIEDLEYKLDFRGLGVKTMEEIQSELSSLQSS 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KD LH ELEKLRD+Q YME D++ +Q RWH +REEK KAAN LRD               
Sbjct: 901  KDKLHGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    +L EAL PLSKEK++LL+DYN+ K + N EYEEL EKKR +QQEVE LL+ +
Sbjct: 961  SQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRNYQQEVEALLKAS 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
             KI EY DLKKGERL ++QEK+  ++SQLQ C++RK E+  ELN++KDLMRNQDQLRRNI
Sbjct: 1021 YKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNELAGELNRNKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYR TKA V+EL R+IESLEEQIL IGG++ VEAEI K+ +ERERLLSELNR  GT
Sbjct: 1081 EDNLNYRTTKAKVEELTREIESLEEQILNIGGIAAVEAEIVKILRERERLLSELNRCRGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            +SVY+S+ISKN+++LK AQYKDIDKR+FDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 VSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQD+DYI IHSDSEGAGTRSYSYKVLMQTGD ELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQTGDTELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN+ESLA ALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQ+IGQRQHAEKYYRV KDD QHSIIE+QEIFD
Sbjct: 1321 QLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot
Match: Q92878 (DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.8e-156
Identity = 412/1390 (29.64%), Postives = 704/1390 (50.65%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM I G+RSF  + +++ +ITFF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ +   RS   TQK+ K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVI- 120

Query: 121  TINPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSK 180
            T   H GE                             KV LS +CA++DRE+ + +GVSK
Sbjct: 121  TRTKH-GE-----------------------------KVSLSSKCAEIDREMISSLGVSK 180

Query: 181  AVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKL 240
            AVL NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q  ++K Y++
Sbjct: 181  AVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQM 240

Query: 241  KLENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKI 300
            +L+ L+  K+ A ++R+ I+  + +  S K  ++  E  +     ++   E  L  + K+
Sbjct: 241  ELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKL 300

Query: 301  QDQISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLERE 360
             ++I    + +  + K+  +    + +  + TDE+L +     +  +   E K+    RE
Sbjct: 301  DNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRE 360

Query: 361  MNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPF 420
            +  +  +S  L Q  +E + E  +LQ +A+ H      RDS IQ L  +  L      PF
Sbjct: 361  LEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPF 420

Query: 421  GDEVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKAD 480
             +    N    ++ R               + E KTA     D  ++    + Q     D
Sbjct: 421  SERQIKNFHKLVRER--------------QEGEAKTANQLMNDFAEKETLKQKQIDEIRD 480

Query: 481  IKRGIVKRIE---------EKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAE 540
             K G+ + IE         + E +   +ELQ        I E ++ + I+ ER+ ++  +
Sbjct: 481  KKTGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQEL-IKAERELSKAEK 540

Query: 541  REFESTIRQK----QSELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHR 600
                 T++ +    Q+E   +++ ++ +++E + +   +  R ++ +   +  +  ++ R
Sbjct: 541  NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 600

Query: 601  KIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDD 660
            KI   + D++  +L G FP +K L+                        +L +   E + 
Sbjct: 601  KIKSRHSDELTSLL-GYFPNKKQLE-----------------------DWLHSKSKEINQ 660

Query: 661  LNSKSREAEKDVNMLQMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKA 720
               +  +  K++   +     +N  L R ++++ S   + +          F  D     
Sbjct: 661  TRDRLAKLNKELASSEQNKNHINNELKRKEEQLSS---YEDKLFDVCGSQDFESD----- 720

Query: 721  LEGAKEKKDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFTAEEE-DEFVKKQ 780
            L+  KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   
Sbjct: 721  LDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDL 780

Query: 781  RVKAASSAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEEL 840
            + K   + + +K    E    +    ++  L  + +  + L  + IP    +L  +N ++
Sbjct: 781  QSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDI 840

Query: 841  DEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGK 900
                  +++   +L  +  + +S +  +  +   +R   E++  ++++     KL    +
Sbjct: 841  QRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKL----Q 900

Query: 901  GV---KTLEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKA 960
            G+   +T++++  E    Q+  D + +++E  R   +  +  + +++   + L+ EK++ 
Sbjct: 901  GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQI 960

Query: 961  ANTL--RDHLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLL--- 1020
            +  L  R  L E  + LS E   L  +  + K++++     L     KFQQE E L+   
Sbjct: 961  STNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVS----PLETTLEKFQQEKEELINKK 1020

Query: 1021 RTTSK----------------------IKEYLDLKKGERLKELQEKKAQAESQLQGCDSR 1080
             T++K                      I+ Y+   K +  K+ + +  +  +QL  C+  
Sbjct: 1021 NTSNKIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKH 1080

Query: 1081 KQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKADVDELARDIESLEEQILKIGG--- 1140
            K++I  ++   +  +  Q    R ++DNL  RK     +E  +++E   +Q LK  G   
Sbjct: 1081 KEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKR----NEELKEVEEERKQHLKEMGQMQ 1140

Query: 1141 VSTVEAEIGKLSQERERLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLI 1200
            V  +++E  KL +  + +    N   G    Y+  I   K +L+  Q++D +++Y + +I
Sbjct: 1141 VLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMI 1200

Query: 1201 QLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSD- 1260
             ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD 
Sbjct: 1201 VMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDA 1260

Query: 1261 ----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA 1320
                S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+A
Sbjct: 1261 DENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIA 1299

Query: 1321 LDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV 1335
            LDEPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+
Sbjct: 1321 LDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRI 1299

[Close]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot
Match: Q54CS9 (DNA repair protein RAD50 OS=Dictyostelium discoideum OX=44689 GN=rad50 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.7e-154
Identity = 394/1387 (28.41%), Postives = 714/1387 (51.48%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            M++++K+L++GIRSFDP   +VI F+ PLTLIVG NGAGKTTIIECLK +CTGE+PPN  
Sbjct: 1    MTSIEKLLVQGIRSFDPREASVIDFYSPLTLIVGQNGAGKTTIIECLKYTCTGEMPPNCS 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKAS-KMEYKAIESVLQT 120
            SG +FIHD K+AGE+E K QIKLRFK   GK +V  RS  L QK++ K EYK I++ LQ+
Sbjct: 61   SGQAFIHDTKIAGESEVKAQIKLRFKNPIGKPIVASRSLSLIQKSNKKQEYKQIDASLQS 120

Query: 121  INPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKA 180
                        +  DG                   KV  S+RC+DMD+EIP LMGV+K 
Sbjct: 121  ------------YTSDGQ------------------KVSKSFRCSDMDKEIPDLMGVAKP 180

Query: 181  VLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLK 240
            +L++VIF HQ+++NWPL + + LK KFD+IFSA +YTKAL+ +K   K+    IK  KL+
Sbjct: 181  ILKHVIFCHQEDSNWPLSESAKLKLKFDEIFSAVKYTKALKSLKDKRKELTTLIKELKLR 240

Query: 241  LENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQ 300
            LE +    +   ++R+ + + +E   +    +++++  I +    +   +     +++++
Sbjct: 241  LETISANIEHCNRIRKELIKAEEIYSNGNKSLEDIKIAIIEKQKTLSTIKIAESKLQELK 300

Query: 301  DQISTKTAERSTLFKEQQKQYAALAE-ENEDTDEELREWKTKFEERIAILESKVSKLERE 360
            ++++   A +  + + + + + +L E    +TDEEL   +++F      + +   +L   
Sbjct: 301  NEVTVLNARKLEMERVKNQLFNSLTEVYQNETDEELVFMQSEFNRECETMATAEKELLEN 360

Query: 361  MNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSV--PNT 420
               + ++   +   I E   +  +LQ+      S+ ++RD  ++EL  R+ +        
Sbjct: 361  SEVLLSQKEVINNLIKENSSQKGRLQSLISQQDSILSDRDKQMKELVTRYKMSDFIQIQL 420

Query: 421  PFGDEVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAK 480
            P+  E+     N I  +   L   + +   +N  +L       M  N   K +++ +   
Sbjct: 421  PYQKEIVIKFINEITQKFDTLTSGISNYSKTNKQKLNA---IQMKINQ--KRVDSNQFTS 480

Query: 481  ADIKRGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQI---EVERKTNQLAEREFE 540
            +  ++     +  K+ +    E+Q     +  ID  EK +Q    E+    +    +E +
Sbjct: 481  SSNEKMSTITLNSKKIQSLDQEIQQHTNSIGEIDTLEKQIQFSQSELSILKSDANLQEIQ 540

Query: 541  STIRQKQSELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAEL-DNHKKKHRKIIDEYK 600
             ++    +E   IE++I+++     ++   +  R +L +K+ E+  N +  + ++  +  
Sbjct: 541  QSLDNLTTEKLEIEKEIQSLQSSLKLLNLQASSRTRLNIKRKEIQQNQQNINSQLNSQII 600

Query: 601  DKIRGVLKGRF-------PPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDD 660
            + I  +L   F         +   +  I Q +   +  + K +L +  + L  +  ++  
Sbjct: 601  NSINLILPNEFNNDNNNDDDDDQFRFNIIQRIEPIVPLINKKRL-IFTNQLNELKQQFQI 660

Query: 661  LNSKSREAEKDV-NMLQMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHS-------- 720
            L +K  + +  + + ++ ++++    L  Y+K +   K    +  ++++ ++        
Sbjct: 661  LQNKKNQIDAQLTSSIEPQLKKKQIELESYEKLINDSKLKQSNLFENVNSNNNNNNNNNN 720

Query: 721  -FSVDLYLKALEGAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEE 780
              +V L+   +   K   +  +  + + +    ++  +   A     C  C+      E 
Sbjct: 721  GITVLLFENKINEMKLSLEKLEKSFIVLESEDILYKEYIEKANQDKECSLCKNEMNGNEL 780

Query: 781  DEFVKKQRVKAASSAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLSNETIPNAEKEL 840
              FV             +K L +E S +    ++ +KL  +  +  +L  ++IP  ++  
Sbjct: 781  TSFVHTLETHCNDIPNQLKQLKIEISNSKIQLEKFNKLLPIIVKREELIEKSIPELKESQ 840

Query: 841  HQLNEELDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVY 900
              L E+  + ++ + +    +  +++     + +       D+  Q IQ+ + ++     
Sbjct: 841  KNLLEQQLKSNEMVLEKQNQIESLESQSVLYQQVTLVFQYIDQTKQSIQSIESEIQKEEK 900

Query: 901  KLDFRGKGVKTLEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREE 960
            ++  +   ++T+EE+  +L   Q     +  E+    ++Q+  +  +   + +  +++ +
Sbjct: 901  EIMKQSSDLRTIEEVDKDLEIQQEQLKTIEKEISNFTNKQKNDQIGIFEKERQLISIKNQ 960

Query: 961  --KVKAANTLRDHLAEALIPLSKEKDKL----------LNDYNERKDKLNCEYEEL---- 1020
               +K+A+ + DHL +    L     +L          ++  N    +L  E+++L    
Sbjct: 961  LTTIKSASGIIDHLRDTKKELQSNNQQLQLEIENLQQSIDQSNNDAKQLENEFQQLEIEF 1020

Query: 1021 -------GEKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSR 1080
                    ++K  F   ++++    SKI +  +L K  +L E+QEK  + ES L      
Sbjct: 1021 EKKIDAYSKEKNTFSVRLDSINSLQSKILDPSELCK--QLNEIQEKNQELESNLSTLSQD 1080

Query: 1081 KQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKADVDELARDIESLEEQILKIGGVST 1140
                   ++  +  + ++D  +R I DN+++R+ K +V+++ R I S + +++K    S 
Sbjct: 1081 YLIGQQHISTIQQNLSSKDITKRAISDNISFRQHKNNVEQIIRQI-SRKNELIKEMMQSQ 1140

Query: 1141 VEAEIGKLSQERERLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLK 1200
            +E +  KL QE   L S+ ++  G  +V QS I+ N+ +L    YK+ID    D LI+L+
Sbjct: 1141 LEIDSNKLEQEINSLKSKFDQITGQTAVLQSQINSNRQELSKPTYKNIDDVNKDLLIKLQ 1200

Query: 1201 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGA 1260
            TTE   KDLD+YY ALDK+LM++HT+KM+EIN+ I+E+WQ TY+G DID I I S+  G 
Sbjct: 1201 TTETVGKDLDKYYKALDKSLMKYHTLKMDEINRSIKEIWQTTYKGSDIDTIEIRSEESGT 1260

Query: 1261 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1320
              ++ +Y+V+M  GD EL+MRGRCSAGQKVLA L+IRLALAE FC NCGILALDEPT++L
Sbjct: 1261 ANKTINYRVVMIKGDVELDMRGRCSAGQKVLACLVIRLALAENFCSNCGILALDEPTSHL 1320

Query: 1321 DGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHS 1340
            D  N ES A +LL I+E RK Q+ FQLI+ITHDE F Q + +  + + Y+RVTK+ +QHS
Sbjct: 1321 DRANIESFANSLLNIIESRKSQKGFQLIIITHDEEFVQYLSRGNYCDYYWRVTKNANQHS 1348

[Close]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot
Match: Q9JIL8 (DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.9e-154
Identity = 409/1393 (29.36%), Postives = 698/1393 (50.11%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM   G+RSF  + +++ +I+FF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSTLGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ V+  RS   +QK+ K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVLVQRSMLCSQKSKKTEFKTLEGVIT 120

Query: 121  TINPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSK 180
             I    GE                             KV LS +CA++DRE+ + +GVSK
Sbjct: 121  RIK--HGE-----------------------------KVSLSSKCAEIDREMISCLGVSK 180

Query: 181  AVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKL 240
            +VL NVIF HQ+++NWPL +   LK+KFD+IFSATRY KAL+ ++++ + Q  ++K  + 
Sbjct: 181  SVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQT 240

Query: 241  KLENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKI 300
            +L+ L+  K+ A ++R+ I+  + +  S +  ++  E  ++    ++   E  L  + ++
Sbjct: 241  ELKYLRQNKEKACEIRDQITSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRL 300

Query: 301  QDQISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLERE 360
             ++I    + +  + K+  +    + +  + TDE+L +     +  +   E ++   +RE
Sbjct: 301  DNEIKALDSRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRE 360

Query: 361  MNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPF 420
            +  +  ++  L Q   E + E  +LQ +A+ H      RDS IQ L A   L      PF
Sbjct: 361  LEKLSKEARLLNQERAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPF 420

Query: 421  GDEVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKAD 480
             +    N    ++ R               + E KTA     D  D+    + Q     D
Sbjct: 421  SERQIKNFHELVRER--------------QEREAKTASQLLSDLTDKEALKQRQMDEMRD 480

Query: 481  IKRGIVKRIEEKESERDSFELQISHV-----DLSHIDEREKNMQIEVERKTNQLAEREFE 540
             K G+ + IE K       + ++ +V      L    +R   +  E+ +   +L++ E  
Sbjct: 481  KKSGLGRMIELKTEILTKKQTELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKN 540

Query: 541  STIR-------QKQSELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRK 600
            S+I          QSE   +++ ++ +++E + +   +  R ++ +   +  +  ++ RK
Sbjct: 541  SSIETLKAEILNLQSEKADLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRK 600

Query: 601  IIDEYKDKIRGVLKGRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDL 660
            I   + D++  +L G FP +K L+                        +L +   E +  
Sbjct: 601  IKSRHSDELTSLL-GYFPNKKQLE-----------------------DWLHSKSKEINQT 660

Query: 661  NSKSREAEKDVNMLQMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKAL 720
              +  +  K++   +     +N  L + ++++ S   + +          F  DL     
Sbjct: 661  RDRLAKLNKELASAEQNKNHINNELKKKEEQLSS---YEDKLFDVCGSQDFESDL----- 720

Query: 721  EGAKEKKDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVCPCCERPFTAEEE-DEFVKK 780
               + K+D++KS    A   G   ++  F  +        CP C+R F  E E  E +  
Sbjct: 721  --DRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPGCQRVFQTEAELQEVISD 780

Query: 781  QRVKAASSAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEE 840
             + K   + + +K    E    +    ++  L  + +  + L  + IP     L  +N +
Sbjct: 781  LQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIPELRNRLQSVNRD 840

Query: 841  LDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRG 900
            +      +++   +L  V  + +S +  +  +   +R   E++  ++++     KL    
Sbjct: 841  IQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKL---- 900

Query: 901  KGV---KTLEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVK 960
            +GV   +T++++  E    Q+  D + +++E  R   +  +  + +++ + + L+ EK++
Sbjct: 901  QGVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQ 960

Query: 961  AANTL--RDHLAEALIPLSKEKDKLLNDYNERK----------DKLNCEYEELGEKK--- 1020
             A  L  R  + E  + LS E   L  +  + K          +KL  E EEL  +K   
Sbjct: 961  IATNLQRRQQMEEQTVELSTEVQSLNREIKDAKEQINPLEIALEKLQQEKEELIHRKNTS 1020

Query: 1021 --------RKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQE 1080
                       +++V+ +      I+ Y+   K +  K+ + +  +   QL  CD  K++
Sbjct: 1021 NKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNEVVIQLNECDKHKEK 1080

Query: 1081 ILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEA 1140
            I  E+   +  +  +    R ++DNL  RK + ++    +++E   +Q LK  G   V  
Sbjct: 1081 INKEMGTMRQDIDTKKIQERWLQDNLTLRKRREEL----KEVEEERKQHLKEMGQMQV-L 1140

Query: 1141 EIGKLSQERERLLSELNRFH----GTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQL 1200
            ++    Q+ E  +  + R H    G    Y+  I   K +L+  Q++D +++Y + +I +
Sbjct: 1141 QMKNEHQKLEENIDTIKRNHSLALGRQKGYEEEILHFKKELREPQFRDAEEKYREMMIVM 1200

Query: 1201 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSD--- 1260
            +TTE+ NKDLD YY  LD A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD   
Sbjct: 1201 RTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADE 1260

Query: 1261 --SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1320
              S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALD
Sbjct: 1261 NVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1304

Query: 1321 EPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTK 1340
            EPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YRV K
Sbjct: 1321 EPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRVKK 1304

[Close]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot
Match: P70388 (DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 8.8e-153
Identity = 414/1396 (29.66%), Postives = 703/1396 (50.36%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM I G+RSF  + +++ +I+FF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ V   RS   +QK  K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRSMLCSQKNKKTEFKTLEGVIT 120

Query: 121  TINPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSK 180
                                            M +  KV LS +CA++DRE+ + +GVSK
Sbjct: 121  R-------------------------------MKHGEKVSLSSKCAEIDREMISCLGVSK 180

Query: 181  AVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKL 240
            +VL NVIF HQ+++NWPL +   LK+KFD+IFSATRY KAL+ ++++ + Q  ++K  + 
Sbjct: 181  SVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQT 240

Query: 241  KLENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKI 300
            +L+ L+  K+ A ++R+ I+  + +  S +  ++  E  ++    ++   E  L  + K+
Sbjct: 241  ELKYLKQNKEKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEIEHNLSKIMKL 300

Query: 301  QDQISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLERE 360
             ++I    + +  + K+  +    + +  + TDE+L +     +  +   E ++   +RE
Sbjct: 301  DNEIKALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRE 360

Query: 361  MNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPF 420
            +  +  ++  L Q   E + E  +LQ +A+ H      RDS IQ L     L      PF
Sbjct: 361  LEKLNKEARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPF 420

Query: 421  GDEVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKAD 480
             +    N    +K R               + E KTA     D  D+    + Q     D
Sbjct: 421  SERQIKNFHELVKER--------------QEREAKTASQLLSDLTDKEALKQRQLDELRD 480

Query: 481  IKRGIVKRIEEKESERDSFELQISHV-----DLSHIDEREKNMQIEVERKTNQLAEREFE 540
             K G+ + IE K       + ++ HV      L    +R   +  E+ +   +L++ E  
Sbjct: 481  RKSGLGRTIELKTEILTKKQSELRHVRSELQQLEGSSDRILELDQELTKAERELSKAEKN 540

Query: 541  STIR-------QKQSELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRK 600
            S+I          Q+E   +++ ++ +++E + +   +  R ++ +   +  +  ++ RK
Sbjct: 541  SSIETLKAEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRK 600

Query: 601  IIDEYKDKIRGVLKGRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDL 660
            I   + D++  +L G FP +K L+                                 D L
Sbjct: 601  IKSRHSDELTSLL-GYFPNKKQLE---------------------------------DWL 660

Query: 661  NSKSREAEKDVNMLQMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKAL 720
            +SKS    K++N  + ++ ++N  L+      E  K  + ++L+  +    S +  L  +
Sbjct: 661  HSKS----KEINQTRDRLAKLNKELA----SAEQNKNHINNELKKKEEQLSSYEDKLFDV 720

Query: 721  EGAKE--------KKDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVCPCCERPFTAEE 780
             G+++        K++++KS    A   G   ++  F  +        CP C+R F  E 
Sbjct: 721  CGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEA 780

Query: 781  E-DEFVKKQRVKAASSAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLSNETIPNAEK 840
            E  E +   + K   + + +K    E    +    ++  L  V +  + L  + IP    
Sbjct: 781  ELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPVRQSIIDLKEKEIPELRN 840

Query: 841  ELHQLNEELDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDL 900
             L  +N ++      +++   +L  +  + +S +  +  +   +R   E++  ++++   
Sbjct: 841  RLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQ 900

Query: 901  VYKLDFRGKGV---KTLEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWH 960
              KL    +GV   +T++++  E    Q+  D + +++E  R   +  +  + +++ + +
Sbjct: 901  AAKL----QGVDLDRTVQQVNQEKQEKQHRLDTVTSKIELNRKLIQDQQEQIQHLKSKTN 960

Query: 961  TLREEKVKAANTL--RDHLAEALIPLSKEKDKLLNDYNERK----------DKLNCEYEE 1020
             L+ EK++ A  L  R  + E  + LS E   L  +  + K          +KL  E EE
Sbjct: 961  ELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREIKDAKEQISPLETALEKLQQEKEE 1020

Query: 1021 LGEKK-----------RKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQ 1080
            L  +K              +++V+ +      I+ Y+   K +  K+ + +      QL 
Sbjct: 1021 LIHRKHTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNGVAVQLN 1080

Query: 1081 GCDSRKQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKADVDELARDIESLEEQILKI 1140
             C+  +++I  ++   +  +  Q    R ++DNL  RK +   DEL +++E   +Q LK 
Sbjct: 1081 ECEKHREKINKDMGTMRQDIDTQKIQERWLQDNLTLRKRR---DEL-KEVEEEPKQHLKE 1140

Query: 1141 GGVSTVEAEIGKLSQERERLLSELNRFH----GTMSVYQSNISKNKIDLKHAQYKDIDKR 1200
             G   V  ++    Q+ E  +  + R H    G    Y+  I   K +L+  Q++D +++
Sbjct: 1141 MGQMQV-LQMKNEHQKLEENIDTIKRNHSLALGRQKGYEDEILHFKKELREPQFRDAEEK 1200

Query: 1201 YFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1260
            Y + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI
Sbjct: 1201 YREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYI 1260

Query: 1261 SIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1320
             I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCL
Sbjct: 1261 EIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCL 1299

Query: 1321 NCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHA 1335
            NCGILALDEPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+G+ ++ 
Sbjct: 1321 NCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYV 1299

[Close]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL
Match: A0A1S3AWR7 (DNA repair protein RAD50 OS=Cucumis melo OX=3656 GN=LOC103483462 PE=3 SV=1)

HSP 1 Score: 2393.2 bits (6201), Expect = 0.0e+00
Identity = 1269/1364 (93.04%), Postives = 1283/1364 (94.06%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVK QMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTL+KEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLYKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINE+IWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEHIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIK RLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNI+AQKHAKADIK
Sbjct: 421  EVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKD+MAGDSEDRVKLALKKAELD+HKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDVMAGDSEDRVKLALKKAELDSHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN+NLSRYQKEMESRKRFVESKLQ LDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNHNLSRYQKEMESRKRFVESKLQFLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELN LQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNTLQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVS VEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSAVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL
Match: A0A6J1IVK4 (DNA repair protein RAD50 OS=Cucurbita maxima OX=3661 GN=LOC111479648 PE=3 SV=1)

HSP 1 Score: 2383.2 bits (6175), Expect = 0.0e+00
Identity = 1264/1364 (92.67%), Postives = 1281/1364 (93.91%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTLFKEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIKSRLVDLDKDMQDKR+SNDVELKTAWDCYM ANDRWKNIEAQKHAKADIK
Sbjct: 421  EVASNLTNRIKSRLVDLDKDMQDKRVSNDVELKTAWDCYMGANDRWKNIEAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIE KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEVKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRLPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN NLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQ LDKLRMVFEEYVKLSNETIP AEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRD+VENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKT+EEIQSELNALQNT
Sbjct: 841  ADRDAVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDL+N+QIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLSNLQIRWHTLREEKVKAANTLRDVRKAEEELDLLTEER 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLL+TT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRKFQQEVETLLKTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEIL ELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAE+GKLSQ+RERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFH+
Sbjct: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHS 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDD QHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL
Match: A0A0A0L416 (Zinc-hook domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129670 PE=3 SV=1)

HSP 1 Score: 2383.2 bits (6175), Expect = 0.0e+00
Identity = 1265/1364 (92.74%), Postives = 1281/1364 (93.91%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVK QMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTL+KEQQKQYAAL+EENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLYKEQQKQYAALSEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            D+ETKSSFLKQ INEYIWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DLETKSSFLKQAINEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIK RLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNI+AQKHAKADIK
Sbjct: 421  EVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGI+KRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN+NLSRYQKEMESRKRFVESKLQSLDP SFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S++DSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQT QKQVDDLVYKLDFRGKGVKTLEEIQSELN LQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLEEIQSELNTLQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSY+VLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL
Match: A0A6J1E9E7 (DNA repair protein RAD50 OS=Cucurbita moschata OX=3662 GN=LOC111432029 PE=3 SV=1)

HSP 1 Score: 2375.9 bits (6156), Expect = 0.0e+00
Identity = 1260/1364 (92.38%), Postives = 1279/1364 (93.77%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTLFKEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINE+IWEISKLQTEAEVHMSLKNERDS I+ELFARHNLGSVPNT F D
Sbjct: 361  DMETKSSFLKQTINEHIWEISKLQTEAEVHMSLKNERDSNIEELFARHNLGSVPNTSFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIKSRLVDLDKDMQDKR+SNDVELKTAWDCYM ANDRWKNIEAQKHAKADIK
Sbjct: 421  EVASNLTNRIKSRLVDLDKDMQDKRVSNDVELKTAWDCYMGANDRWKNIEAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIV+RIE KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVRRIEAKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRLPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN NLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLA+ES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAMES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQ LDKLRMVFEEYVKLSNETIP AEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRD++ENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKT+EEIQSELNALQNT
Sbjct: 841  ADRDAIENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEER 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEIL ELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVSTVEAE+GKLSQ+RERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFH+
Sbjct: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHS 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDD QHSIIESQEIFD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL
Match: A0A5D3D3I4 (DNA repair protein RAD50 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002930 PE=3 SV=1)

HSP 1 Score: 2366.3 bits (6131), Expect = 0.0e+00
Identity = 1255/1351 (92.89%), Postives = 1269/1351 (93.93%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKAV
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAV 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL
Sbjct: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESISQDQEKTESVK QMQELEKNIQD DAKIHHAETLLKDVRK+QD
Sbjct: 241  ENLQTLKDAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            QISTKTAERSTL+KEQQKQYAALAEENEDTDEEL+EWKTKFEERIAILESKVSKLEREMN
Sbjct: 301  QISTKTAERSTLYKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMN 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            DMETKSSFLKQTINE+IWEISKLQTEAEVHMSLKNERDSTI+ELFARHNLGSVPNTPF D
Sbjct: 361  DMETKSSFLKQTINEHIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSD 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EVASNLTNRIK RLVDLDKDMQDKR+SNDVELKTAWDCYMDANDRWKNI+AQKHAKADIK
Sbjct: 421  EVASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
            RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ
Sbjct: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
            S+LYGIEQKIKAVNREKD+MAGDSEDRVKLALKKAELD+HKKKHRKIIDEYKDKIRGVLK
Sbjct: 541  SDLYGIEQKIKAVNREKDVMAGDSEDRVKLALKKAELDSHKKKHRKIIDEYKDKIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GRFPPEKDLKKEITQA                   LRAVGMEYDDLNSKSREAEKDVNML
Sbjct: 601  GRFPPEKDLKKEITQA-------------------LRAVGMEYDDLNSKSREAEKDVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN+NLSRYQKEMESRKRFVESKLQ LDPHSFSVDLYLKALEGAKEKKDVQKSKY
Sbjct: 661  QMKIQEVNHNLSRYQKEMESRKRFVESKLQFLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES
Sbjct: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S+ADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK
Sbjct: 781  SSADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELN LQNT
Sbjct: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNTLQNT 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD               
Sbjct: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    HLAEALIPLSKEKDKLLNDYNE KDKLN EYEELG+KKRKFQQEVETLLRTT
Sbjct: 961  GQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLLRTT 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
            SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI
Sbjct: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYRKTKA+VDELARDIESLEEQILKIGGVS VEAEIGKLSQERERLLSELNRFHGT
Sbjct: 1081 EDNLNYRKTKAEVDELARDIESLEEQILKIGGVSAVEAEIGKLSQERERLLSELNRFHGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            M VYQSNISKNKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 MCVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1303

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDD 1329
            QLIVITHDERFAQLIGQRQHAEKYYRVTKDD
Sbjct: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDD 1303

[Close]

BLAST of ClCG05G003110 vs. TAIR 10
Match: AT2G31970.1 (DNA repair-recombination protein (RAD50) )

HSP 1 Score: 1876.7 bits (4860), Expect = 0.0e+00
Identity = 990/1364 (72.58%), Postives = 1135/1364 (83.21%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPEN+NV+TFF+PLTLIVG NGAGKTTIIECLK+SCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETK QIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGELVSAVFLEDGNEKLVDSPRNDKFFMMNVGKVCLSYRCADMDREIPALMGVSKAV 180
            NPHTGE                             KVCLSYRCADMDREIPALMGVSKA+
Sbjct: 121  NPHTGE-----------------------------KVCLSYRCADMDREIPALMGVSKAI 180

Query: 181  LENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL 240
            LENVIFVHQDE+NWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQA EIKT+KLKL
Sbjct: 181  LENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKL 240

Query: 241  ENLQTLKDAAYKLRESISQDQEKTESVKSQMQELEKNIQDFDAKIHHAETLLKDVRKIQD 300
            ENLQTLKDAAYKLRESI+QDQE+TES K QM ELE ++Q  DA++H+ E +LKD+RK+QD
Sbjct: 241  ENLQTLKDAAYKLRESIAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLKDLRKLQD 300

Query: 301  QISTKTAERSTLFKEQQKQYAALAEENEDTDEELREWKTKFEERIAILESKVSKLEREMN 360
            Q+S KTAERSTLFKEQQ+QYAAL EENEDT EEL+EWK+KFEER+A+L +K+ K+EREM 
Sbjct: 301  QVSIKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREMV 360

Query: 361  DMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKNERDSTIQELFARHNLGSVPNTPFGD 420
            D ET  S L      Y+ EISKLQTEAE HM LKNERDSTIQ +F  +NLG+VP+TPF  
Sbjct: 361  DTETTISSLHNAKTNYMLEISKLQTEAEAHMLLKNERDSTIQNIFFHYNLGNVPSTPFST 420

Query: 421  EVASNLTNRIKSRLVDLDKDMQDKRISNDVELKTAWDCYMDANDRWKNIEAQKHAKADIK 480
            EV  NLTNRIKSRL +L+ D+ DK+ SN+  L TAWDCYMDANDRWK+IEAQK AK +IK
Sbjct: 421  EVVLNLTNRIKSRLGELEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIK 480

Query: 481  RGIVKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQ 540
             GI KRIEEKE ERDSFE +IS VD+   DEREK +Q+E+ERKT Q +ER FES I QKQ
Sbjct: 481  MGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQKQ 540

Query: 541  SELYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLK 600
             E+Y +E KIK +NRE+D+MAGD+EDRVKL+LKK E +N KKKH+KIIDE KD+IRGVLK
Sbjct: 541  HEIYSLEHKIKTLNRERDVMAGDAEDRVKLSLKKTEQENLKKKHKKIIDECKDRIRGVLK 600

Query: 601  GRFPPEKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNML 660
            GR PPEKD+K+EI QA                   LR++  EYDDL+ KSREAEK+VNML
Sbjct: 601  GRLPPEKDMKREIVQA-------------------LRSIEREYDDLSLKSREAEKEVNML 660

Query: 661  QMKIQEVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKY 720
            QMKIQEVN +L ++ K+ ESRKR++ESKLQ+L   S ++D Y K LE AK+K+D +K +Y
Sbjct: 661  QMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLESAKDKRDDRKREY 720

Query: 721  NIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVES 780
            N+A+GMRQMF+PFE+ AR  H CPCCER FTA+EE  F+KKQRVKA+S+ EH+K LAVES
Sbjct: 721  NMANGMRQMFEPFEKRARQEHSCPCCERSFTADEEASFIKKQRVKASSTGEHLKALAVES 780

Query: 781  STADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVK 840
            S ADS FQQLDKLR VFEEY KL+ E IP AEK L +  EEL +KS+ALDDV+G+ AQ+K
Sbjct: 781  SNADSVFQQLDKLRAVFEEYSKLTTEIIPLAEKTLQEHTEELGQKSEALDDVLGISAQIK 840

Query: 841  ADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLEEIQSELNALQNT 900
            AD+DS+E LVQP++ ADR++QEI ++QKQ++DL YKLDFRG GVKT+EEIQSEL++LQ++
Sbjct: 841  ADKDSIEALVQPLENADRIFQEIVSYQKQIEDLEYKLDFRGLGVKTMEEIQSELSSLQSS 900

Query: 901  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRD--------------- 960
            KD LH ELEKLRD+Q YME D++ +Q RWH +REEK KAAN LRD               
Sbjct: 901  KDKLHGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEK 960

Query: 961  --------HLAEALIPLSKEKDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTT 1020
                    +L EAL PLSKEK++LL+DYN+ K + N EYEEL EKKR +QQEVE LL+ +
Sbjct: 961  SQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRNYQQEVEALLKAS 1020

Query: 1021 SKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI 1080
             KI EY DLKKGERL ++QEK+  ++SQLQ C++RK E+  ELN++KDLMRNQDQLRRNI
Sbjct: 1021 YKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNELAGELNRNKDLMRNQDQLRRNI 1080

Query: 1081 EDNLNYRKTKADVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSELNRFHGT 1140
            EDNLNYR TKA V+EL R+IESLEEQIL IGG++ VEAEI K+ +ERERLLSELNR  GT
Sbjct: 1081 EDNLNYRTTKAKVEELTREIESLEEQILNIGGIAAVEAEIVKILRERERLLSELNRCRGT 1140

Query: 1141 MSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200
            +SVY+S+ISKN+++LK AQYKDIDKR+FDQLIQLKTTEMANKDLDRYYNALDKALMRFHT
Sbjct: 1141 VSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1200

Query: 1201 MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCS 1260
            MKMEEINKIIRELWQQTYRGQD+DYI IHSDSEGAGTRSYSYKVLMQTGD ELEMRGRCS
Sbjct: 1201 MKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQTGDTELEMRGRCS 1260

Query: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENF 1320
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN+ESLA ALLRIMEDRKGQENF
Sbjct: 1261 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENF 1316

Query: 1321 QLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1342
            QLIVITHDERFAQ+IGQRQHAEKYYRV KDD QHSIIE+QEIFD
Sbjct: 1321 QLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD 1316

[Close]

BLAST of ClCG05G003110 vs. TAIR 10
Match: AT1G67230.1 (little nuclei1 )

HSP 1 Score: 58.5 bits (140), Expect = 4.6e-08
Identity = 121/523 (23.14%), Postives = 239/523 (45.70%), Query Frame = 0


Query: 606  EKDLKKEITQALRHDLTFLPKSKLNLLFSYLRAVGMEYDDLNSKSREAEKDVNMLQMKIQ 665
            EK LK+   +A   ++ F   SKL    + +R+V         KS E E  +  +  K+ 
Sbjct: 134  EKALKE--LRAENAEIKFTADSKLTEANALVRSV-------EEKSLEVEAKLRAVDAKLA 193

Query: 666  EVNYNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEGAKEKKDVQKSKYNIADG 725
            EV    SR   ++E + + VE++  SL    FS   Y+   E   ++  + K + ++ + 
Sbjct: 194  EV----SRKSSDVERKAKEVEARESSLQRERFS---YIAEREA--DEATLSKQREDLREW 253

Query: 726  MRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVESSTADS 785
             R++ +  ERVA++  +    +R   A E D+ +K++  +   + + +    +     + 
Sbjct: 254  ERKLQEGEERVAKSQMIVK--QREDRANESDKIIKQKGKELEEAQKKIDAANLAVKKLED 313

Query: 786  HFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVKADRDS 845
                  K   + E+   +  ++I    +EL  L E+L+ + +             A +  
Sbjct: 314  DVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEAREK------------MAVQQL 373

Query: 846  VENLVQPIDTADRLYQ-EIQTWQKQVDD----LVYKLDFRGKGVKTLEEIQSELNALQNT 905
            V+     +D+  R ++ E++  +K +DD     V +++ R    K +EE       +   
Sbjct: 374  VDEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEE------KVAKR 433

Query: 906  KDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDHL---AEALIPLSKE 965
            +  L  +LEK ++++   +  L  I  R   L+ E+ KA  T +  L    E ++ L   
Sbjct: 434  EQALDRKLEKHKEKENDFDLRLKGISGREKALKSEE-KALETEKKKLLEDKEIILNLKAL 493

Query: 966  KDKLLNDYNERKDKLNCEYEELGEKKRKFQQEVETLLRTTSKIKEYLDLKKGER---LKE 1025
             +K+  +   +  ++N E +EL    R  ++E    LR  +++KE ++  + ++    KE
Sbjct: 494  VEKVSGENQAQLSEINKEKDEL----RVTEEERSEYLRLQTELKEQIEKCRSQQELLQKE 553

Query: 1026 LQEKKAQAES---QLQGCDSRKQEILAELNKSKDLMRNQDQLRRNI---EDNLNYRKTKA 1085
             ++ KAQ ES   + +  D RK +I  EL   K++   +++L R+I   E+ L   K  A
Sbjct: 554  AEDLKAQRESFEKEWEELDERKAKIGNEL---KNITDQKEKLERHIHLEEERLKKEKQAA 607

Query: 1086 DVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERERLLSEL 1112
            + + + R++E+LE  + K     T+E E   LS++ E   S+L
Sbjct: 614  N-ENMERELETLE--VAKASFAETMEYERSMLSKKAESERSQL 607

The following BLAST results are available for this feature:

BLAST of ClCG05G003110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891799.1	0.0e+00	93.33	DNA repair protein RAD50 isoform X1 [Benincasa hispida] >XP_038891805.1 DNA repa...	[more]
XP_008438322.1	0.0e+00	93.04	PREDICTED: DNA repair protein RAD50 [Cucumis melo]	[more]
XP_022980190.1	0.0e+00	92.67	DNA repair protein RAD50 [Cucurbita maxima]	[more]
XP_004133980.1	0.0e+00	92.74	DNA repair protein RAD50 isoform X1 [Cucumis sativus] >KGN56710.1 hypothetical p...	[more]
XP_023527295.1	0.0e+00	92.67	DNA repair protein RAD50 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG05G003110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL02	0.0e+00	72.58	DNA repair protein RAD50 OS=Arabidopsis thaliana OX=3702 GN=RAD50 PE=1 SV=2	[more]
Q92878	3.8e-156	29.64	DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1	[more]
Q54CS9	2.7e-154	28.41	DNA repair protein RAD50 OS=Dictyostelium discoideum OX=44689 GN=rad50 PE=3 SV=1	[more]
Q9JIL8	7.9e-154	29.36	DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1	[more]
P70388	8.8e-153	29.66	DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1	[more]

BLAST of ClCG05G003110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AWR7	0.0e+00	93.04	DNA repair protein RAD50 OS=Cucumis melo OX=3656 GN=LOC103483462 PE=3 SV=1	[more]
A0A6J1IVK4	0.0e+00	92.67	DNA repair protein RAD50 OS=Cucurbita maxima OX=3661 GN=LOC111479648 PE=3 SV=1	[more]
A0A0A0L416	0.0e+00	92.74	Zinc-hook domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129670 P...	[more]
A0A6J1E9E7	0.0e+00	92.38	DNA repair protein RAD50 OS=Cucurbita moschata OX=3662 GN=LOC111432029 PE=3 SV=1	[more]
A0A5D3D3I4	0.0e+00	92.89	DNA repair protein RAD50 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of ClCG05G003110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31970.1	0.0e+00	72.58	DNA repair-recombination protein (RAD50)	[more]
AT1G67230.1	4.6e-08	23.14	little nuclei1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1012..1032
None	No IPR available	COILS	Coil	Coil	coord: 574..594
None	No IPR available	COILS	Coil	Coil	coord: 1063..1083
None	No IPR available	COILS	Coil	Coil	coord: 887..928
None	No IPR available	COILS	Coil	Coil	coord: 257..291
None	No IPR available	COILS	Coil	Coil	coord: 643..677
None	No IPR available	COILS	Coil	Coil	coord: 955..996
None	No IPR available	COILS	Coil	Coil	coord: 1090..1110
None	No IPR available	COILS	Coil	Coil	coord: 801..828
None	No IPR available	COILS	Coil	Coil	coord: 313..372
None	No IPR available	COILS	Coil	Coil	coord: 536..556
None	No IPR available	PANTHER	PTHR18867	RAD50	coord: 1..129 coord: 155..1339
None	No IPR available	CDD	cd03240	ABC_Rad50	coord: 4..99 e-value: 1.19408E-36 score: 135.813
None	No IPR available	CDD	cd03240	ABC_Rad50	coord: 1230..1333 e-value: 1.24062E-43 score: 155.843
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..324 e-value: 6.1E-31 score: 110.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1041..1340 e-value: 4.5E-26 score: 94.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 20..1311
IPR004584	DNA repair protein Rad50, eukaryotes	TIGRFAM	TIGR00606	TIGR00606	coord: 156..1335 e-value: 1.4E-140 score: 468.2
IPR013134	RAD50, zinc hook	PFAM	PF04423	Rad50_zn_hook	coord: 735..772 e-value: 8.8E-7 score: 28.6
IPR013134	RAD50, zinc hook	PROSITE	PS51131	ZN_HOOK	coord: 696..795 score: 8.579006
IPR038729	Rad50/SbcC-type AAA domain	PFAM	PF13476	AAA_23	coord: 7..279 e-value: 1.7E-31 score: 110.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G003110.1	ClCG05G003110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016233	telomere capping
biological_process	GO:0000722	telomere maintenance via recombination
biological_process	GO:0007004	telomere maintenance via telomerase
biological_process	GO:0000723	telomere maintenance
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000794	condensed nuclear chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003691	double-stranded telomeric DNA binding
molecular_function	GO:0051880	G-quadruplex DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0043047	single-stranded telomeric DNA binding