ClCG05G002700 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G002700
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr05: 2541913 .. 2543922 (-)
RNA-Seq Expression	ClCG05G002700
Synteny	ClCG05G002700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGTTCTGGTGATTTGCATCGCAATAGGGATAATAGAGGTGTACGGCGTTCCCTCAATCGTGGGCAATCATTCTGTTGGAAATTGGAATCATACCTTCGCTTTGTCATAATCTGGGAATTTAGTTGTGATGCTACAATTTTTCTTGATATATGCTTAAAAATAGCAGGTTCATTTATTTCACCATATAGTTTCGAGAGTCTGCTTGTTAGTAAATTATGCGCCTAAATGTTTGAGATCTTCTACTTTCTCTGACGACAACAAGAAACCTTTGGTATTGGCCTGTGTTTTAGCAGATTCGAGTCTCTCTTCCTGCTTGATGGGCATATTTTTTTATATTTTTCGAGGGTAGAGATGAATTGCAAGTGATTGGAGCATATTTTTGATGCAGCGGACTCTACAAATTATTAGTGAATATAAAATTATCTGTTTAAAACTGTGACTAAAAGATCAATCAATTTCATTATTTTAATACGGGGTCATTACTGTTGTCTGACTAGATTTTGTGTGTTTCAAATTTTTTTGACATGGCTTGGAAAAATACAGAGAACCATATGTACTTACGTAGGTCTTGTTTCTGTGGAGGGATTAGTATTATCAAGATAAGGTTGAGAAGCTATATTTGGACAAGGTTTTAGTCTTATTTTAATTTTTTGACATTACAAAAATAGGCATGTCATATTTTTTTTCCTGGTCAGAATGGGCATAAATGGAGTATTGAATTAGTTAATAAACAAAAGAGTTTAAGTCGATCAAACTCCAGGCCCCACATAAGTGCACCATAAGGTAGTTTTGTGCATTCAGTTTAGGAAATGAGATTAAAGTGCATTGGAACAATCAGTTTAGTTTAAAATTAATTAGGCCAAGGTTCATACCTCCTTTTCTTGTCCCTCAGTAATTTTTTTGAAAGGTCTGGTTTTTGTACTCTGGTTGATTCAGGTTGCTGCTAGCATAATGATTCTTTATTTTTATTGAGTCTTGGCCGGGACGTAAACAATGATGAGTGTAACCGAGAATAAAGTATCTCCTTAATTTCCATGGGTATTCTACTCAAATCTGCTGTTCTTCTTAAATAACTATCATATTATGCATAAGTTTTCCATGCAAAATCTGCACTCAATTTCAATGAACATCTAAACATCATTCACCTGTTTAATTAACTGCAATCAAATTATGCATTCCTTTCCTCCCCATTTTCTTGGTCGCTGTTGTGTGCCTGTCTATATGTGCTGCAAAAGACTCTACAATGTAGGTCTTTCGAAGTTTATGTTCTACTAAAGATTTTGCTCATGTATGTTGTTGTCATACATTGCTAGTGCCGTTAATAGTTCATTACATAGCTTCTGCAGTTTTGTACAAGCTAGAATAACATGGTGAGTTACTTGCAGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAGTGCCTGGATGTCAGTTATGATAATAGTATACCTTCTTATGTAAAAATGATACGAATCTAAGTTCATGGACGTGTTGTTTCGACTGTAGAGCAATGCTGTCCACGTTCTTTGTTTCTGTAACATAAACTCTCTCTGCACGGGTTGTTTGTCTGTACTGTCTTATGGAAACTTATTGCTGTCTGAGCCCAATGAATGAACTTGTGAACCCCTTGGTACTCAGCATTCTTTTTTTACATTTGTGTCACTCCTAATGTAATACCATACAATGGTGCCTTAAATATTGTATATAGGTTATATACATCGTATGTTAATAGTTA

mRNA sequence

CATTGTTCTGGTGATTTGCATCGCAATAGGGATAATAGAGGTGTACGGCGTTCCCTCAATCGTGGGCAATCATTCTGTTGGAAATTGGAATCATACCTTCGCTTTGTCATAATCTGGGAATTTAGTTGTGATGCTACAATTTTTCTTGATATATGCTTAAAAATAGCAGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAGTGCCTGGATGTCAGTTATGATAATAGTATACCTTCTTATGTAAAAATGATACGAATCTAAGTTCATGGACGTGTTGTTTCGACTGTAGAGCAATGCTGTCCACGTTCTTTGTTTCTGTAACATAAACTCTCTCTGCACGGGTTGTTTGTCTGTACTGTCTTATGGAAACTTATTGCTGTCTGAGCCCAATGAATGAACTTGTGAACCCCTTGGTACTCAGCATTCTTTTTTTACATTTGTGTCACTCCTAATGTAATACCATACAATGGTGCCTTAAATATTGTATATAGGTTATATACATCGTATGTTAATAGTTA

Coding sequence (CDS)

CATTGTTCTGGTGATTTGCATCGCAATAGGGATAATAGAGGTGTACGGCGTTCCCTCAATCGTGGGCAATCATTCTGTTGGAAATTGGAATCATACCTTCGCTTTGTCATAATCTGGGAATTTAGTTGTGATGCTACAATTTTTCTTGATATATGCTTAAAAATAGCAGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAG

Protein sequence

HCSGDLHRNRDNRGVRRSLNRGQSFCWKLESYLRFVIIWEFSCDATIFLDICLKIAENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG

Homology

[Close]

BLAST of ClCG05G002700 vs. NCBI nr
Match: XP_022974968.1 (uncharacterized protein LOC111473815 [Cucurbita maxima])

HSP 1 Score: 145.2 bits (365), Expect = 4.7e-31
Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 53  LKIAENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLV 112
           +++   +TECH+MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKLNS+N NLV
Sbjct: 13  VEMKTKQTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV 72

Query: 113 NGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG 158
                    GKE+D +EKYRSELIAISFLESPPEIGSVPV +LKG
Sbjct: 73  E--------GKEFDADEKYRSELIAISFLESPPEIGSVPVGKLKG 109

[Close]

BLAST of ClCG05G002700 vs. NCBI nr
Match: KAG6582528.1 (hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-31
Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 65  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKE 124
           MDITVPG N  EEVTRESLIAISYEEPET LSSKRSSGKL+SEN NLVNGIDHNLV GKE
Sbjct: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60

Query: 125 YDGEEKYRSELIAISFLESPPEIGSVPVAELK 157
           YD  EKYRSELIAISFLESPPEIGS  V ELK
Sbjct: 61  YD-VEKYRSELIAISFLESPPEIGSGTVTELK 91

[Close]

BLAST of ClCG05G002700 vs. NCBI nr
Match: KAG7018913.1 (hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-31
Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 65  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKE 124
           MDITVPG N  EEVTRESLIAISYEEPET LSSKRSSGKL+SEN NLVNGIDHNLV GKE
Sbjct: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60

Query: 125 YDGEEKYRSELIAISFLESPPEIGSVPVAELK 157
           YD  EKYRSELIAISFLESPPEIGS  V ELK
Sbjct: 61  YD-VEKYRSELIAISFLESPPEIGSGTVTELK 91

[Close]

BLAST of ClCG05G002700 vs. NCBI nr
Match: XP_022963288.1 (uncharacterized protein LOC111463263 [Cucurbita moschata])

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-30
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 53  LKIAENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLV 112
           +++   +TECH+MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKLNS+N NLV
Sbjct: 13  VEMKTKQTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV 72

Query: 113 NGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG 158
                    GKE+D +EKYRSELI+ISFLESPPEIGSVPV +LKG
Sbjct: 73  E--------GKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG 109

[Close]

BLAST of ClCG05G002700 vs. NCBI nr
Match: KAA0049081.1 (hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK17482.1 hypothetical protein E5676_scaffold434G003470 [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-29
Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 65  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKE 124
           MDITVPGRNA EEVTRESLI+ISYEEPET LSSKR S KL+SEN NL NGI+HN V GKE
Sbjct: 1   MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLANGINHNQVEGKE 60

Query: 125 YDGEEKYRSELIAISFLESPPEIGSVPVA 154
           YDG+EK+RSELIAISFLES PE GSVPVA
Sbjct: 61  YDGDEKFRSELIAISFLESLPETGSVPVA 89

[Close]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL
Match: A0A6J1IHW2 (uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 53  LKIAENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLV 112
           +++   +TECH+MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKLNS+N NLV
Sbjct: 13  VEMKTKQTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV 72

Query: 113 NGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG 158
                    GKE+D +EKYRSELIAISFLESPPEIGSVPV +LKG
Sbjct: 73  E--------GKEFDADEKYRSELIAISFLESPPEIGSVPVGKLKG 109

[Close]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL
Match: A0A6J1HHB9 (uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC111463263 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.1e-31
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 53  LKIAENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLV 112
           +++   +TECH+MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKLNS+N NLV
Sbjct: 13  VEMKTKQTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV 72

Query: 113 NGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG 158
                    GKE+D +EKYRSELI+ISFLESPPEIGSVPV +LKG
Sbjct: 73  E--------GKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG 109

[Close]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL
Match: A0A5A7U641 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003470 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 5.7e-30
Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 65  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKE 124
           MDITVPGRNA EEVTRESLI+ISYEEPET LSSKR S KL+SEN NL NGI+HN V GKE
Sbjct: 1   MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLANGINHNQVEGKE 60

Query: 125 YDGEEKYRSELIAISFLESPPEIGSVPVA 154
           YDG+EK+RSELIAISFLES PE GSVPVA
Sbjct: 61  YDGDEKFRSELIAISFLESLPETGSVPVA 89

[Close]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL
Match: A0A0A0L967 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.7e-30
Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 65  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKE 124
           MD TVPGRNA EEVTRESLI+ISYEEPET LSS + S K++ EN NL NGI+HN + GKE
Sbjct: 1   MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 125 YDGEEKYRSELIAISFLESPPEIGSVPVAELKG 158
           YDG+EK+RSELIAISFLES PE GSVPVAELKG
Sbjct: 61  YDGDEKFRSELIAISFLESLPETGSVPVAELKG 93

[Close]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL
Match: A0A7N2LFG9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.3e-13
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 64  FMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGK 123
           FMD TVPG+   +EVTRESLI+ISY EP+   ++K SS KLNSENH  +  +D N     
Sbjct: 52  FMDKTVPGKEVPDEVTRESLISISYSEPDKVPTTKLSSEKLNSENH--LGRVDSN----- 111

Query: 124 EYDGEEKYRSELIAISFLESPPEIGSVPVA 154
              G+EKYRSELI+IS+ +S PE G +PV+
Sbjct: 112 ---GDEKYRSELISISYTQS-PETGGLPVS 130

The following BLAST results are available for this feature:

BLAST of ClCG05G002700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974968.1	4.7e-31	71.43	uncharacterized protein LOC111473815 [Cucurbita maxima]	[more]
KAG6582528.1	6.2e-31	86.96	hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7018913.1	6.2e-31	86.96	hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022963288.1	1.1e-30	70.48	uncharacterized protein LOC111463263 [Cucurbita moschata]	[more]
KAA0049081.1	1.2e-29	83.15	hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK174...	[more]

BLAST of ClCG05G002700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG05G002700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHW2	2.3e-31	71.43	uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815...	[more]
A0A6J1HHB9	5.1e-31	70.48	uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A5A7U641	5.7e-30	83.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L967	9.7e-30	77.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1	[more]
A0A7N2LFG9	6.3e-13	54.44	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of ClCG05G002700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35282:SF2	F5D14.24 PROTEIN	coord: 56..153
None	No IPR available	PANTHER	PTHR35282	F5D14.24 PROTEIN	coord: 56..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G002700.1	ClCG05G002700.1	mRNA