ClCG05G002630 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G002630
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	replication factor C subunit 3-like
Location	CG_Chr05: 2461329 .. 2471230 (-)
RNA-Seq Expression	ClCG05G002630
Synteny	ClCG05G002630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAGTCTATTATTATTATTATTATTATAAATGAAAATACCAAAACCTTATCCCCTAATTATTTTCTCTATAAACCCCCCATTCGGCATCCCATCCTTTTCCCTCCCTTTCAAATGGAAACAAATCTCAACCTTTTCTCTCCTCTCCTCCGTCGCCGCCGCCACAACCTCCGCCTTCCAACTTGACCATCATCTCTCTCTCCATGGCCACACAACAACAACAAGAACAACCCAACCCATCCCTTCGTCGTTCCTTGTCAGATTCCGACCACCGCCGTCGCCGTCGCCGTGCCACCATCTCAACGACGTCGTCAAAATCCTCATGGAGTTCAAAGCTAGGAAAACTCCTTGCCCGTTTAGCCCTTTTCTCTCGAGACTCCGACCTGACTGAAGAAAGCCTTGAAGCCCATAACAAACGAATAAACTACCTCGATACCCTCGACAAAACCCCCAAAACTAGCCCTTACTACCGTGGACTTACCGATTCCTCCCTCGCCATTAATTACCATTATGGCCCTCTCAATTCTACTCCCTTCCACGTCACCACCACTACTCCTCGTGGTCCCCACAGTTATGCCAACTCAGCAGCCACCTCAACTCAATCCTCCCTCGTCTCCAAATTCAAAGACTACTGGGCCCCATGCCTCGGGAAACAACAACCACACCAACCACCCAGTATTCCCCATAATTCTAACTCCAAAGTGCCATATCATCATCAGAGAATCCAGACGGTTACGACGACGACGGTTGTGGCGAAAACGGCGTCGTTGGGATCGACGTCAGCGAATAATAATAAGGAGGAGGAGGAGATAAGGGAAAATCGTGATGACGCTGAGAGGAAGAAGCTGTTGAGGGAGAGATTAGTATCGAACGGCGGTCGGCGAGGAGACGGTGGCGGAGTGGCGGTGGTGGTGGAGATGGAAAAAGAGACGTATAGTTGGGGGGATAAGTATAGGCCAAAAGTGTTGGAGGATTTTATATGCAATAAAAAAAGGGCAATGGAATTAAAGGAAATGGTTAAGGAAAAAGGATGTGGGCATTATTATATATTTGAAGGGGCGCCTGGAGTTGGGAAGAGGACTATGATTCAAGCCATGCTTCGTCAAGCTTTTGGAGATCAACCAATGGAGGTGTATTATCAGTACGACTTAATAAACCTTCCCCGTTCCCCCAACATATATTTCATCATTTTCTTTTCTTTCTCCTTCTCAAAACGTGCATGCATTAATACCCTACCCTCGTGTTTGAACGGTTGAATTGAGTTTTGAAATCTGAAACTAAGAAAATTTGTGCTTCGGTAGAGAATCGTAAGATGAAATAATTCCTCGATAAATATATGTAAACTTCTATAAGGAACACTATTGCAGTCGAATTATTTCCATAGTTTTTTAATATATGTGTTAATTAGAATGGTTTGAACATATTTTAGCTTGCGTGTTTTAATTTTAATTTGTTGTCTCTATTTGAACATAACTTAGTGAATAACTGACTAATTATTATCTCATAAGGTTAGATGGTTTAATCTTTTATTGTCAATTAGGTTTGCCTTTAAAATATTTTTGTTTAAATTGTTGGTTTCATTTTATAGTTTTAAAGTTGTAATTTTAGTTATTAACGTCAATGGTAGCTAAGTGGATAAGACATTAATTATCATATCAAATATCAATAGTTCAATCATCCATGATTTGGAATATATTTAGGTTAAATTATTGATTTAATTTTATAATTTTAGAAGTTCTAATTTTATTTATAACAAGACTATGACTTAGTAAATAAGATACTAATTACCATTTTATAAGTCGATTGTTAGTTTTCTACTTGAACTAAAAAAACCTTTATAATCTTTTTAAGTTTAGTTTAAAATAAGTTTTACGATTACCTTACAAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTCTTGCTCTAGATAACTCATCTGTATTTTTTTCATTTTAATTTTTTGTGAATATAGAAATCATCAACTCGTTTTCTTGAACTTTTAAATGTGACTTAAATTGAAACTAATACCTAAGTCATAGATCGGGTCAAATTTGTAATCTAACTAAATTTTAAGTTTGGTCATCCCAAAGCTATAGGGTAANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTATTCTTATCTCTCTGTGTTTAGTTGAAACATGTAACCTAGGAATTGACGGAAAATGACAATACTGGACTGATCTTATTCTGATTATACATTAGAAATCATATCATTCTCTCTCTTTGCGGTGGCCTTTTTGTTTTTTTTAAGGGGATGGTAAAAGTCCAAAAGGAATTATTTCAAGTCTTTCTAGGAAAATAGGATGTAAAAAGTTTTTAAAAATAATTCTTACAACGATGGAATATAGAAATTTGAATATTTGACTTAAAAACAAATACATGTCCATCATAATTGAGATACAGACATTATTTTTATTAGTATTGTTTTTTTTTTTTTTTTTAATATTAATTAGTTAAGAAGTAGGAAAATCTGAGTGGCTTTATTGTTTTATTTTTTCTCCTGATATTAAGCATAAATCAACAATTTACATAATTATATATTATTGAATAATTTAAACTTCTAAACTCTTAATCCAATTTCATTAAATTTACTTCATAGGAATATAATGCTTTAGGCCAACTAAAACTTCATCAAACAAGAAATATGATTGAAGTTTCTACAATGTAACCCCTTTTTCATCTTCGAAAATTATTCATTAATTTTGAAATGGGAATTTAGCTAACTTTTTCTCTCCTTCCCTTCCCACAGATCAAGGAAGTTGTCAAGGTTTTTGACTTGAAGGTGTGTTTTATTTTCCCTTCTCTTAACATATACATTGGAGAGAGAGCATAATTCATTTTTACCTTCCATTTAATTAAACTTTCCATTAAAAAAAAAAAAAATACAAAACAATTTTGATCCTAACTTTATTATGTTGTATCAGTTTGAACCCTAGATTTTCAATTTGATCAAATTCGACCCCATACATACACAAGTGTTGTTAATTTCTACCATCGATCAATTCAATTTTAACAAAGAGCAATATTAAAATCTTCTTGAGCTCATTAATATCAATAAAATAAATATATTTTTTTTCAATGATATTTAGAGCAAGAACGTATTAGAGGGTTAAAATTTCAATATTTTTTCAAAATTAAAGGTTAAAAAGTATTGAGATTTTTTTTCCCCTAAAAACAAATGAAACAATCTAGTGACGTGGAGGGGTATTTGGTTAAATTATGATCAGTAGTTGGTGTGACTTGGCAGAGTGAAATGTTGGGGAGCATAGAAGTTAAGGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGCTTTGAGAAACAAGTCATCGTCCAGCTCATCAAAGAATCTCACTCCCCTTTGCCATGTAATCATACCAATTGTCGAGGTAAACACGTCACAGTGACACATCAGCCGTATGTCTCATTGTTAGTAAATTTGAATTTTCACCCTTTTGTTTGAGGTGTGTAATAATTCTTTATTTTTTTTTTTAAACATAATTCAATTGGTTAAGTTTCTTACATTTGTGGTTGTGTTTGGTTTGTAAATTAAAATTATTATAAGATATAGTATTGACATTGAGTTTCTATTGATGTAGGGATATTGTTATGTGAAGCAGATCAACTATCAAATGAAACCCTAATGTATGTAAAATGGGCAATTGAAAGGAACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGATCTCTCTGCACTCTTGTTCACCTCTCCCCTCCTTCAAAACAAGAGGTCTCAATTTCTTTCCTTTTTTATATTTTATATTTTTTTTCTTCTCCTCTCCATTTCATTTTTATTTAGAAAAAGACAAGTTATTAAAATTTTTGTCCTTTCAATAATGTTTTTTTTTTTTTTTTTTACTTTCATATAATTTTTATAAAAAATTTAAATGTACAAAAAAAAATACAACTTTGATAGACCCTTATTAGTAATATGATCTATCATTAATACTCCTGATAGCTGAATTTAAATTTTGTTATATCTATTAATACTTTAGGTCTGATTAGTATATTTGTAATTTTTTATTTAACTTTTTTTTTCCTTAATTAATTGTTTCCTTATTTTTTAAAATGAGTTTTCTTTAGTTTTTAAATATTAGTTTTGATTTCAAAGACATTTTCTGAGAAGTATAGAAAGGAAAGAAAAACGTCCGTATAGGAAAAAAAAGAGCATAATTACACTTGTGCTACATTTGAACAAAAGGATACAATTTTTTTTAATAATAAATGTTAAAATTTCATTTTATCAAGAAATTTCTCTTTAATATTTTTTTTCAAAAAAAAAAAGCCAAATTTTGTTTAAGTTAACGTTGAAATTCTCATACTCCACGTACTATAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

CGAAAGTCTATTATTATTATTATTATTATAAATGAAAATACCAAAACCTTATCCCCTAATTATTTTCTCTATAAACCCCCCATTCGGCATCCCATCCTTTTCCCTCCCTTTCAAATGGAAACAAATCTCAACCTTTTCTCTCCTCTCCTCCGTCGCCGCCGCCACAACCTCCGCCTTCCAACTTGACCATCATCTCTCTCTCCATGGCCACACAACAACAACAAGAACAACCCAACCCATCCCTTCGTCGTTCCTTGTCAGATTCCGACCACCGCCGTCGCCGTCGCCGTGCCACCATCTCAACGACGTCGTCAAAATCCTCATGGAGTTCAAAGCTAGGAAAACTCCTTGCCCGTTTAGCCCTTTTCTCTCGAGACTCCGACCTGACTGAAGAAAGCCTTGAAGCCCATAACAAACGAATAAACTACCTCGATACCCTCGACAAAACCCCCAAAACTAGCCCTTACTACCGTGGACTTACCGATTCCTCCCTCGCCATTAATTACCATTATGGCCCTCTCAATTCTACTCCCTTCCACGTCACCACCACTACTCCTCGTGGTCCCCACAGTTATGCCAACTCAGCAGCCACCTCAACTCAATCCTCCCTCGTCTCCAAATTCAAAGACTACTGGGCCCCATGCCTCGGGAAACAACAACCACACCAACCACCCAGTATTCCCCATAATTCTAACTCCAAAGTGCCATATCATCATCAGAGAATCCAGACGGTTACGACGACGACGGTTGTGGCGAAAACGGCGTCGTTGGGATCGACGTCAGCGAATAATAATAAGGAGGAGGAGGAGATAAGGGAAAATCGTGATGACGCTGAGAGGAAGAAGCTGTTGAGGGAGAGATTAGTATCGAACGGCGGTCGGCGAGGAGACGGTGGCGGAGTGGCGGTGGTGGTGGAGATGGAAAAAGAGACGTATAGTTGGGGGGATAAGTATAGGCCAAAAGTGTTGGAGGATTTTATATGCAATAAAAAAAGGGCAATGGAATTAAAGGAAATGGTTAAGGAAAAAGGATGTGGGCATTATTATATATTTGAAGGGGCGCCTGGAGTTGGGAAGAGGACTATGATTCAAGCCATGCTTCGTCAAGCTTTTGGAGATCAACCAATGGAGATCAAGGAAGTTGTCAAGGTTTTTGACTTGAAGAGTGAAATGTTGGGGAGCATAGAAGTTAAGGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGCTTTGAGAAACAAGTCATCGTCCAGCTCATCAAAGAATCTCACTCCCCTTTGCCATGTAATCATACCAATTGTCGAGGGATATTGTTATGTGAAGCAGATCAACTATCAAATGAAACCCTAATGTATGTAAAATGGGCAATTGAAAGGAACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGATCTCTCTGCACTCTTGTTCACCTCTCCCCTCCTTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAACGATTGGCTGAGAGAATTGCCGACAATTCCAAGAACAACCTCCGACAAGCCATTCGATCCTTAGAGGCTTCGTGGAAAAAAAGTCAATTGTTTGAAGAAGATGAGAATAAATTATTGACGGGTTGGGAAGATGATATTGCAGACGTTGCTAAGAAGATAGTCGAGGAGCAAAGCCCAAAACAGTTGTATATAGTTCGTGGAAAACTTAAAAAGCTTATTGAATATGATGTCTCCCCCAATTTCATTTTTAGGACTCTAGTAGATGAATTAAAGAAGTTTTTAGACGAAGAACTACAACGTCGAGTTGAAGGTTTCTATGCTGATTATAATAAAATGGAGGAAAAATCATTTGTCGGTGAAAGAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATCCTATGCGAAAGAATGTTAACCACTTCTTGAAGATTGAAGAATTTATAGCGAAGTTCATGAGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAAATAAATAATCTCAACATTTGAAAGGTTGGTGCTTGGGAAAAAAGTCACATTTGAATTTTCCCCTTGGCATAAATATCAGATTCTTGCTTAATATATATTTACACGCAAACTTATAAATATTACTTGTCATGTAATATTACTTGAATCTGTTTTCAAGGTGTGTGGAGATACTTTTAGCCATTTTCT

Coding sequence (CDS)

ATGGCCACACAACAACAACAAGAACAACCCAACCCATCCCTTCGTCGTTCCTTGTCAGATTCCGACCACCGCCGTCGCCGTCGCCGTGCCACCATCTCAACGACGTCGTCAAAATCCTCATGGAGTTCAAAGCTAGGAAAACTCCTTGCCCGTTTAGCCCTTTTCTCTCGAGACTCCGACCTGACTGAAGAAAGCCTTGAAGCCCATAACAAACGAATAAACTACCTCGATACCCTCGACAAAACCCCCAAAACTAGCCCTTACTACCGTGGACTTACCGATTCCTCCCTCGCCATTAATTACCATTATGGCCCTCTCAATTCTACTCCCTTCCACGTCACCACCACTACTCCTCGTGGTCCCCACAGTTATGCCAACTCAGCAGCCACCTCAACTCAATCCTCCCTCGTCTCCAAATTCAAAGACTACTGGGCCCCATGCCTCGGGAAACAACAACCACACCAACCACCCAGTATTCCCCATAATTCTAACTCCAAAGTGCCATATCATCATCAGAGAATCCAGACGGTTACGACGACGACGGTTGTGGCGAAAACGGCGTCGTTGGGATCGACGTCAGCGAATAATAATAAGGAGGAGGAGGAGATAAGGGAAAATCGTGATGACGCTGAGAGGAAGAAGCTGTTGAGGGAGAGATTAGTATCGAACGGCGGTCGGCGAGGAGACGGTGGCGGAGTGGCGGTGGTGGTGGAGATGGAAAAAGAGACGTATAGTTGGGGGGATAAGTATAGGCCAAAAGTGTTGGAGGATTTTATATGCAATAAAAAAAGGGCAATGGAATTAAAGGAAATGGTTAAGGAAAAAGGATGTGGGCATTATTATATATTTGAAGGGGCGCCTGGAGTTGGGAAGAGGACTATGATTCAAGCCATGCTTCGTCAAGCTTTTGGAGATCAACCAATGGAGATCAAGGAAGTTGTCAAGGTTTTTGACTTGAAGAGTGAAATGTTGGGGAGCATAGAAGTTAAGGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGCTTTGAGAAACAAGTCATCGTCCAGCTCATCAAAGAATCTCACTCCCCTTTGCCATGTAATCATACCAATTGTCGAGGGATATTGTTATGTGAAGCAGATCAACTATCAAATGAAACCCTAATGTATGTAAAATGGGCAATTGAAAGGAACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGATCTCTCTGCACTCTTGTTCACCTCTCCCCTCCTTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAACGATTGGCTGAGAGAATTGCCGACAATTCCAAGAACAACCTCCGACAAGCCATTCGATCCTTAGAGGCTTCGTGGAAAAAAAGTCAATTGTTTGAAGAAGATGAGAATAAATTATTGACGGGTTGGGAAGATGATATTGCAGACGTTGCTAAGAAGATAGTCGAGGAGCAAAGCCCAAAACAGTTGTATATAGTTCGTGGAAAACTTAAAAAGCTTATTGAATATGATGTCTCCCCCAATTTCATTTTTAGGACTCTAGTAGATGAATTAAAGAAGTTTTTAGACGAAGAACTACAACGTCGAGTTGAAGGTTTCTATGCTGATTATAATAAAATGGAGGAAAAATCATTTGTCGGTGAAAGAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATCCTATGCGAAAGAATGTTAACCACTTCTTGAAGATTGAAGAATTTATAGCGAAGTTCATGAGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAA

Protein sequence

MATQQQQEQPNPSLRRSLSDSDHRRRRRRATISTTSSKSSWSSKLGKLLARLALFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPYHHQRIQTVTTTTVVAKTASLGSTSANNNKEEEEIRENRDDAERKKLLRERLVSNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK

Homology

[Close]

BLAST of ClCG05G002630 vs. NCBI nr
Match: XP_008438224.1 (PREDICTED: replication factor C subunit 3-like [Cucumis melo])

HSP 1 Score: 981.9 bits (2537), Expect = 2.6e-282
Identity = 534/633 (84.36%), Postives = 562/633 (88.78%), Query Frame = 0


Query: 1   MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSRD 60
           MATQQQ +Q  PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARLAL SRD
Sbjct: 1   MATQQQLQQ--PSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRD 60

Query: 61  SDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTP 120
           SDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLAINYH+GPLNSTP++VT    
Sbjct: 61  SDLTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVT---- 120

Query: 121 RGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PYHHQRIQTV 180
                YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTV
Sbjct: 121 -----YATSAAPSTQSSIVSKFKEYWAPCLRKQQQQQQP--PHTTPHKVPPRQHQRIQTV 180

Query: 181 TT-TTVVAKTA--SLGSTSANNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD---- 240
           TT TTVV K    S GSTSA+ N +EE    + +   +KKLLRERL VSNGG R D    
Sbjct: 181 TTSTTVVTKATWFSSGSTSASANFKEE--MSSDEMMTKKKLLRERLVVSNGGERRDRGGG 240

Query: 241 ----GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEG 300
               GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEG
Sbjct: 241 SGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEG 300

Query: 301 APGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 360
           APGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT
Sbjct: 301 APGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 360

Query: 361 KGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 420
           KGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFF
Sbjct: 361 KGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFF 420

Query: 421 CCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 480
           CC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR
Sbjct: 421 CCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 480

Query: 481 QAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 540
           QAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY
Sbjct: 481 QAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 540

Query: 541 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDP 600
           DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADY K+EEK+FV ERGSGEE VVKGQ+DP
Sbjct: 541 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDP 600

Query: 601 MRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 619
           +RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Sbjct: 601 VRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 618

[Close]

BLAST of ClCG05G002630 vs. NCBI nr
Match: XP_011650816.1 (replication factor C subunit 3 [Cucumis sativus])

HSP 1 Score: 976.5 bits (2523), Expect = 1.1e-280
Identity = 529/632 (83.70%), Postives = 554/632 (87.66%), Query Frame = 0


Query: 1   MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSRD 60
           MATQQ+Q+   PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARLA  SRD
Sbjct: 1   MATQQEQQ---PSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRD 60

Query: 61  SDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTP 120
           SDLTEESLEAHNKRIN LDTLDKTPK+SPYYRGLTDSSLAINYH+GPLNSTP+HVT    
Sbjct: 61  SDLTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVT---- 120

Query: 121 RGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPYHHQRIQTVT 180
                YA SAA STQSS+VSKFKDY APCL KQQP  P + P     KVP  HQRIQTVT
Sbjct: 121 -----YATSAAPSTQSSIVSKFKDYMAPCLRKQQPQSPQTSPR----KVPRQHQRIQTVT 180

Query: 181 T-TTVVAKTA--SLGSTSANNNKEEEEIRENRDDAERKKLLRERLV---------SNGGR 240
           T TTVV K    S GSTSA+    +EE+  + +   +KKLLRERLV         S GG 
Sbjct: 181 TATTVVTKATWFSSGSTSASAT-FKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGS 240

Query: 241 RGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGA 300
              GGGV VV EMEKE YSWGD  RPKVLEDFICNKK A+ELKEMVKEKGCGHYYIFEGA
Sbjct: 241 GSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGA 300

Query: 301 PGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTK 360
           PGVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTK
Sbjct: 301 PGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTK 360

Query: 361 GFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFC 420
           GFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLS ETLMY+KWA+ER KGCSKIFFC
Sbjct: 361 GFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFC 420

Query: 421 CSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQ 480
           CSDASKLLLL SLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQ
Sbjct: 421 CSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQ 480

Query: 481 AIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYD 540
           AIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYD
Sbjct: 481 AIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYD 540

Query: 541 VSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPM 600
           VSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNK+EEK FV E+GSGEEAV+KGQHD +
Sbjct: 541 VSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKLEEKVFVSEKGSGEEAVIKGQHDSI 600

Query: 601 RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 619
           RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Sbjct: 601 RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 615

[Close]

BLAST of ClCG05G002630 vs. NCBI nr
Match: KAA0049072.1 (replication factor C subunit 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 920.6 bits (2378), Expect = 7.1e-264
Identity = 498/593 (83.98%), Postives = 525/593 (88.53%), Query Frame = 0


Query: 20  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSRDSDLTEESLEAHNKRINYLD 79
           DS+HRRR  RRRATISTTSSKSSWSSKLGKLLARLAL SRDSDLTEESLEAHNKRIN LD
Sbjct: 4   DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63

Query: 80  TLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTPRGPHSYANSAATSTQSSLV 139
           TL+KTPK+SPYYRGLTDSSLAINYH+GPLNSTP++VT         YA SAA STQSS+V
Sbjct: 64  TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVT---------YATSAAPSTQSSIV 123

Query: 140 SKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PYHHQRIQTVTT-TTVVAKTA--SLGSTS 199
           SKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S GSTS
Sbjct: 124 SKFKEYWAPCLRKQQQQQQP--PHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTS 183

Query: 200 ANNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETY 259
           A+ N +EE    + +   +KKLLRERL VSNGG R D        GGGV VV EMEKE Y
Sbjct: 184 ASANFKEE--MSSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERY 243

Query: 260 SWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFG 319
           SWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFG
Sbjct: 244 SWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFG 303

Query: 320 DQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPL 379
           +Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPL
Sbjct: 304 NQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPL 363

Query: 380 PCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVH 439
           PCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFFCC+DASKL LL S+CTLVH
Sbjct: 364 PCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVH 423

Query: 440 LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFEED 499
           LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF+ED
Sbjct: 424 LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDED 483

Query: 500 ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL 559
           ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL
Sbjct: 484 ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL 543

Query: 560 DEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE 598
           DEELQRRVEGFYADY K+EEK+FV ERGSGEE VVKGQ+DP+RKNVNHFLKIE
Sbjct: 544 DEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 583

[Close]

BLAST of ClCG05G002630 vs. NCBI nr
Match: XP_022975501.1 (replication factor C subunit 3-like [Cucurbita maxima])

HSP 1 Score: 837.8 bits (2163), Expect = 6.0e-239
Identity = 474/628 (75.48%), Postives = 519/628 (82.64%), Query Frame = 0


Query: 2   ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLALFSR 61
           ATQQQ     + SLRRSLSDS+ RRR+RR    + +++SSKSSWS+KL KLLARL LFSR
Sbjct: 3   ATQQQPNFSSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSR 62

Query: 62  DSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTT 121
           +SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSSLAINYH+GPL +T  HVTT 
Sbjct: 63  NSDLTEESLQAHNERI---DDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTTT--HVTT- 122

Query: 122 TPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPYH 181
              GPH YA+S  T+ TQ+SL    VSK K+ WAPCL GK             N K P H
Sbjct: 123 ---GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCLIGK------------PNKKPPAH 182

Query: 182 HQRIQTVTTTTVVAKTASLGSTSANNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG-- 241
           HQ  +T TTTTVV KT SL +TS++  K E    E     + +KLLRERLV  G R G  
Sbjct: 183 HQH-ETPTTTTVVGKTTSL-ATSSSPEKIERLATE-----KEEKLLRERLVMYGRREGRS 242

Query: 242 ----DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE 301
               DGGG A   E EKE Y+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH YIFE
Sbjct: 243 GVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGH-YIFE 302

Query: 302 GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 361
           G PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQ
Sbjct: 303 GPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVNLSQ 362

Query: 362 TKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 421
           TKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSNETLMYVKWAIERNKGCSKIF
Sbjct: 363 TKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 422

Query: 422 FCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNL 481
           FCCSD SKLLLL SLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNL
Sbjct: 423 FCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNL 482

Query: 482 RQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE 541
           RQAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE
Sbjct: 483 RQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE 542

Query: 542 YDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHD 601
           YDVSPNFIF+TLVDELKKFLDEELQRRVE FYADYNKMEEK FV ++G+GEEAV+K  HD
Sbjct: 543 YDVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVTDKGNGEEAVIKELHD 600

Query: 602 PMRKNVNHFLKIEEFIAKFMSCYKGEAN 613
           PMRKNVNHFLKIEEFIAKFMSCYKGEAN
Sbjct: 603 PMRKNVNHFLKIEEFIAKFMSCYKGEAN 600

[Close]

BLAST of ClCG05G002630 vs. NCBI nr
Match: KAG6597225.1 (Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825.5 bits (2131), Expect = 3.1e-235
Identity = 468/627 (74.64%), Postives = 512/627 (81.66%), Query Frame = 0


Query: 2   ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLALFSR 61
           ATQQQ     + SLRRSLSDS+ RRR RRR +IST  +SSKSSWS+KL KLLARL LFSR
Sbjct: 3   ATQQQPNSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSR 62

Query: 62  DSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTT 121
           +SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSSLAINYH+GPL +        
Sbjct: 63  NSDLTEESLQAHNERI---DDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTT-------- 122

Query: 122 TPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPYHH 181
              GPH YA+S  T+ TQ+SL    VSK K+ WAPCL  +   +PP+            H
Sbjct: 123 ---GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCLIGKPNTKPPA------------H 182

Query: 182 QRIQTVTTTTVVAKTASLGSTSANNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG--- 241
           Q+ +T TTTTVV KT SL + S++  K E    E     + +KLLRERLV  G R G   
Sbjct: 183 QQYETPTTTTVVGKTTSL-AVSSSPEKIERWATE-----KEEKLLRERLVMYGRREGGSG 242

Query: 242 ---DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEG 301
              DGGG A     EKE Y+WGDKYRPKVLEDFICN+K A ELK++V+EKGCGH YIFEG
Sbjct: 243 VGVDGGGEAA----EKERYTWGDKYRPKVLEDFICNRKTACELKKLVEEKGCGH-YIFEG 302

Query: 302 APGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 361
            PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQT
Sbjct: 303 PPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNLSQT 362

Query: 362 KGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 421
           KGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF
Sbjct: 363 KGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 422

Query: 422 CCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 481
           CCSD SKLLLL S CT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLR
Sbjct: 423 CCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNLR 482

Query: 482 QAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 541
           QAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY
Sbjct: 483 QAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 542

Query: 542 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDP 601
           DVSPNFIF+TLVDELKKFLDEELQRRVE FYADYNKMEEK FV E+G+GEEAV+K  HDP
Sbjct: 543 DVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVTEKGNGEEAVIKELHDP 591

Query: 602 MRKNVNHFLKIEEFIAKFMSCYKGEAN 613
           MRKNVNHFLKIEEFIAKFMSCYKGEAN
Sbjct: 603 MRKNVNHFLKIEEFIAKFMSCYKGEAN 591

[Close]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot
Match: Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.0e-43
Identity = 124/370 (33.51%), Postives = 205/370 (55.41%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKYRPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G 
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62

Query: 306 QPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQ-LIKESHS 365
              ++K   + +  D  S  +  +E+    S+++VE+  S   GF+ + IVQ +IKE   
Sbjct: 63  SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAK 122

Query: 366 PLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRS 425
             P +    +G   ++L E D+LS E    ++  +E+     ++  CC+ +SK+   ++S
Sbjct: 123 NRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKS 182

Query: 426 LCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS 485
            C  V ++ PS++EIV+VLEF+AK++   L +  A RIA+ S  +LR+AI SLE    ++
Sbjct: 183 RCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN 242

Query: 486 QLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVD 545
             F  ++      WE+ +A++A  +++EQSPK+L+ VRGK+ +L+   + P  I + L+ 
Sbjct: 243 YPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLH 302

Query: 546 ELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEE 605
           EL K LD EL+  V  + A Y   E +  +G++                        IE 
Sbjct: 303 ELLKKLDSELKLEVCHWAAYY---EHRMRLGQKA--------------------IFHIEA 346

Query: 606 FIAKFMSCYK 609
           F+AKFMS YK
Sbjct: 363 FVAKFMSIYK 346

[Close]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot
Match: Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.2e-41
Identity = 116/368 (31.52%), Postives = 190/368 (51.63%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKYRPK L+    + + A  LK++V E+ C H  +F G  G GK+T++ A+++Q FG 
Sbjct: 3   WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPH-LLFYGPSGSGKKTLVMALIKQMFGA 62

Query: 306 QPMEIKEVVKVFDLKSEMLG-SIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPL 365
              ++K   K + + +      IE+ +  S+H+VE+N S     ++ V+ ++IKE     
Sbjct: 63  GADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNR 122

Query: 366 PCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLC 425
           P +    R    ++L E D+LS E    ++  +E+     ++  CC+ +SK+   +RS C
Sbjct: 123 PIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRC 182

Query: 426 TLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQL 485
             V ++ PS+ +IV+VLEFI K++   L    A RIA  S  NLR+AI   E    +   
Sbjct: 183 LNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYP 242

Query: 486 FEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDEL 545
           F  ++      WE  ++++A  I++EQSPK+L+ VR K  +L+   + P  I + L+ EL
Sbjct: 243 FTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAEL 302

Query: 546 KKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFI 605
            K LD +L+  +  + A Y   E K  +G +                        +E F+
Sbjct: 303 LKKLDSDLKHEICHWAAHY---EHKMRLGSKA--------------------IFHLEAFV 346

Query: 606 AKFMSCYK 609
           AKFMS YK
Sbjct: 363 AKFMSIYK 346

[Close]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot
Match: Q54BN3 (Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=rfc3 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.4e-36
Identity = 110/367 (29.97%), Postives = 190/367 (51.77%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKY+P  L+    +   ++ LK M+K     H  ++ G  G GK+T I A+L++ +G 
Sbjct: 3   WIDKYKPTSLDKMDYHNDISINLKNMIKSGDFPHLLVY-GPSGAGKKTRILAVLQEIYGP 62

Query: 306 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLP 365
             +++K   + F   +    +I++    S +++E+N  +   +++ VI  +IKE     P
Sbjct: 63  NALKLKIDHRTFKHPTSS-KNIQITTISSHYHIEINPGEAGSYDRVVIQTIIKEIAQSPP 122

Query: 366 CNHTNC---RGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCT 425
            +  +    + ++L E D+LS +    ++  +E+     ++  CC   +K++  ++S C 
Sbjct: 123 IDSGSLGAFKIVILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCL 182

Query: 426 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 485
            + +  PS++EI +VL  +A  + FDL  +LA  +A  S  NLR A+  LE+   K   F
Sbjct: 183 GIRVPAPSQEEIEKVLAKVATAEKFDLPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPF 242

Query: 486 EEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 545
           +  E  LL  WE+ I+ + K   EEQSP +L IVRGKL +L+ + + P  IF+TL+ E+ 
Sbjct: 243 QSTELPLL-DWENYISQIVKDCFEEQSPARLSIVRGKLYELLGHCIPPELIFKTLLLEIF 302

Query: 546 KFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIA 605
           K LD  ++  +  + + Y   E +S +G                  K + H   +E FIA
Sbjct: 303 KKLDHNMKFEIIHWASYY---EHRSQIGS-----------------KPIFH---LEAFIA 343

Query: 606 KFMSCYK 609
           KFMS YK
Sbjct: 363 KFMSVYK 343

[Close]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot
Match: Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-32
Identity = 104/367 (28.34%), Postives = 184/367 (50.14%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKYRP  L     +K++A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G 
Sbjct: 4   WVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGI 63

Query: 306 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIK---ESHS 365
              +++   +     S+    IE+    S++++EVN S     ++ VI +++K   +S  
Sbjct: 64  GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123

Query: 366 PLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCT 425
               +  + + +LL E D+L+ +    ++  +E+     ++  CC+  SK++  +RS C 
Sbjct: 124 LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183

Query: 426 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 485
            V +  PS ++I  VL  + +++G  L   LA R+A+ S  NLR+A+   EA   +   F
Sbjct: 184 AVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPF 243

Query: 486 EEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 545
            ED+    T WE  + + A  IV +Q+P++L  VRG+L +L+ + + P  I + L+ EL 
Sbjct: 244 TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL 303

Query: 546 KFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIA 605
              D +L+  V    A Y   E +  +G                  K + H   +E F+A
Sbjct: 304 HNCDGQLKGEVAQMAAYY---EHRLQLGS-----------------KAIYH---LEAFVA 344

Query: 606 KFMSCYK 609
           KFM+ YK
Sbjct: 364 KFMALYK 344

[Close]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot
Match: Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-32
Identity = 104/367 (28.34%), Postives = 185/367 (50.41%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKYRP  L     +K++A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G 
Sbjct: 4   WVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGV 63

Query: 306 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIK---ESHS 365
              +++   +     S+    IE+    S++++EVN S     ++ VI +++K   +S  
Sbjct: 64  GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123

Query: 366 PLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCT 425
               +  + + +LL E D+L+ +    ++  +E+     ++  CC+  SK++  +RS C 
Sbjct: 124 LETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183

Query: 426 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 485
            V +  PS ++I  VL  + K++G +L  +LA R+A+ S  NLR+A+   EA   +   F
Sbjct: 184 AVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPF 243

Query: 486 EEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELK 545
             D+    T WE  + + A  IV +Q+P++L  VRG+L +L+ + + P  I + L+ EL 
Sbjct: 244 TADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL 303

Query: 546 KFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIA 605
              D +L+  V    A Y   E +  +G                  K + H   +E F+A
Sbjct: 304 HNCDGQLKGEVAQMAAYY---EHRLQLGS-----------------KAIYH---LEAFVA 344

Query: 606 KFMSCYK 609
           KFM+ YK
Sbjct: 364 KFMALYK 344

[Close]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL
Match: A0A1S3AWH3 (replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4 SV=1)

HSP 1 Score: 981.9 bits (2537), Expect = 1.3e-282
Identity = 534/633 (84.36%), Postives = 562/633 (88.78%), Query Frame = 0


Query: 1   MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSRD 60
           MATQQQ +Q  PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARLAL SRD
Sbjct: 1   MATQQQLQQ--PSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRD 60

Query: 61  SDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTP 120
           SDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLAINYH+GPLNSTP++VT    
Sbjct: 61  SDLTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVT---- 120

Query: 121 RGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PYHHQRIQTV 180
                YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTV
Sbjct: 121 -----YATSAAPSTQSSIVSKFKEYWAPCLRKQQQQQQP--PHTTPHKVPPRQHQRIQTV 180

Query: 181 TT-TTVVAKTA--SLGSTSANNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD---- 240
           TT TTVV K    S GSTSA+ N +EE    + +   +KKLLRERL VSNGG R D    
Sbjct: 181 TTSTTVVTKATWFSSGSTSASANFKEE--MSSDEMMTKKKLLRERLVVSNGGERRDRGGG 240

Query: 241 ----GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEG 300
               GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEG
Sbjct: 241 SGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEG 300

Query: 301 APGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 360
           APGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT
Sbjct: 301 APGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 360

Query: 361 KGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 420
           KGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFF
Sbjct: 361 KGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFF 420

Query: 421 CCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 480
           CC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR
Sbjct: 421 CCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 480

Query: 481 QAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 540
           QAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY
Sbjct: 481 QAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 540

Query: 541 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDP 600
           DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADY K+EEK+FV ERGSGEE VVKGQ+DP
Sbjct: 541 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDP 600

Query: 601 MRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 619
           +RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Sbjct: 601 VRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK 618

[Close]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL
Match: A0A5A7TZV7 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003010 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 3.4e-264
Identity = 498/593 (83.98%), Postives = 525/593 (88.53%), Query Frame = 0


Query: 20  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSRDSDLTEESLEAHNKRINYLD 79
           DS+HRRR  RRRATISTTSSKSSWSSKLGKLLARLAL SRDSDLTEESLEAHNKRIN LD
Sbjct: 4   DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63

Query: 80  TLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTPRGPHSYANSAATSTQSSLV 139
           TL+KTPK+SPYYRGLTDSSLAINYH+GPLNSTP++VT         YA SAA STQSS+V
Sbjct: 64  TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNVT---------YATSAAPSTQSSIV 123

Query: 140 SKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PYHHQRIQTVTT-TTVVAKTA--SLGSTS 199
           SKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S GSTS
Sbjct: 124 SKFKEYWAPCLRKQQQQQQP--PHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTS 183

Query: 200 ANNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETY 259
           A+ N +EE    + +   +KKLLRERL VSNGG R D        GGGV VV EMEKE Y
Sbjct: 184 ASANFKEE--MSSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERY 243

Query: 260 SWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFG 319
           SWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFG
Sbjct: 244 SWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFG 303

Query: 320 DQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPL 379
           +Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPL
Sbjct: 304 NQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPL 363

Query: 380 PCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVH 439
           PCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFFCC+DASKL LL S+CTLVH
Sbjct: 364 PCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVH 423

Query: 440 LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFEED 499
           LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF+ED
Sbjct: 424 LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDED 483

Query: 500 ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL 559
           ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL
Sbjct: 484 ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL 543

Query: 560 DEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE 598
           DEELQRRVEGFYADY K+EEK+FV ERGSGEE VVKGQ+DP+RKNVNHFLKIE
Sbjct: 544 DEELQRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 583

[Close]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL
Match: A0A6J1IEE5 (replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 PE=4 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 2.9e-239
Identity = 474/628 (75.48%), Postives = 519/628 (82.64%), Query Frame = 0


Query: 2   ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLALFSR 61
           ATQQQ     + SLRRSLSDS+ RRR+RR    + +++SSKSSWS+KL KLLARL LFSR
Sbjct: 3   ATQQQPNFSSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSR 62

Query: 62  DSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTT 121
           +SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSSLAINYH+GPL +T  HVTT 
Sbjct: 63  NSDLTEESLQAHNERI---DDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTTT--HVTT- 122

Query: 122 TPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPYH 181
              GPH YA+S  T+ TQ+SL    VSK K+ WAPCL GK             N K P H
Sbjct: 123 ---GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCLIGK------------PNKKPPAH 182

Query: 182 HQRIQTVTTTTVVAKTASLGSTSANNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG-- 241
           HQ  +T TTTTVV KT SL +TS++  K E    E     + +KLLRERLV  G R G  
Sbjct: 183 HQH-ETPTTTTVVGKTTSL-ATSSSPEKIERLATE-----KEEKLLRERLVMYGRREGRS 242

Query: 242 ----DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE 301
               DGGG A   E EKE Y+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH YIFE
Sbjct: 243 GVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGH-YIFE 302

Query: 302 GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 361
           G PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQ
Sbjct: 303 GPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVNLSQ 362

Query: 362 TKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 421
           TKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSNETLMYVKWAIERNKGCSKIF
Sbjct: 363 TKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 422

Query: 422 FCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNL 481
           FCCSD SKLLLL SLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNL
Sbjct: 423 FCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNL 482

Query: 482 RQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE 541
           RQAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE
Sbjct: 483 RQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE 542

Query: 542 YDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHD 601
           YDVSPNFIF+TLVDELKKFLDEELQRRVE FYADYNKMEEK FV ++G+GEEAV+K  HD
Sbjct: 543 YDVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVTDKGNGEEAVIKELHD 600

Query: 602 PMRKNVNHFLKIEEFIAKFMSCYKGEAN 613
           PMRKNVNHFLKIEEFIAKFMSCYKGEAN
Sbjct: 603 PMRKNVNHFLKIEEFIAKFMSCYKGEAN 600

[Close]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL
Match: A0A6J1G337 (replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450354 PE=4 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 7.5e-235
Identity = 467/627 (74.48%), Postives = 511/627 (81.50%), Query Frame = 0


Query: 2   ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLALFSR 61
           ATQQQ     + SLRRSLSDS+ RRR RRR +IST  +SSKSSWS+KL KLLARL LFSR
Sbjct: 3   ATQQQPNSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSR 62

Query: 62  DSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTT 121
           +SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSSLAINYH+GPL +        
Sbjct: 63  NSDLTEESLQAHNERI---DDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTT-------- 122

Query: 122 TPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPYHH 181
              GPH YA+S  T+ TQ+SL    VSK K+ WAPCL  +   +PP+            H
Sbjct: 123 ---GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCLIGKPNTKPPA------------H 182

Query: 182 QRIQTVTTTTVVAKTASLGSTSANNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG--- 241
           Q+ +T TTTTVV KT SL + S++  K E    E     + +KLLRERLV  G R G   
Sbjct: 183 QQYETPTTTTVVGKTTSL-AVSSSPEKIERWATE-----KEEKLLRERLVMYGRREGGSG 242

Query: 242 ---DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEG 301
              DGGG A     EKE Y+WGDKYRPKVLEDFICN+K A ELK++V+EKGCGH YIFEG
Sbjct: 243 VGVDGGGEAA----EKERYTWGDKYRPKVLEDFICNRKTACELKKVVEEKGCGH-YIFEG 302

Query: 302 APGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT 361
            PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQT
Sbjct: 303 PPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNLSQT 362

Query: 362 KGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 421
           KGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF
Sbjct: 363 KGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFF 422

Query: 422 CCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLR 481
           CCSD SKLLLL S CT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLR
Sbjct: 423 CCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNLR 482

Query: 482 QAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 541
           QAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY
Sbjct: 483 QAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEY 542

Query: 542 DVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDP 601
           DVSPNFIF+TLVDELKKFLDEELQ RVE FYADYNKMEEK FV E+G+GEEAV+K  HDP
Sbjct: 543 DVSPNFIFKTLVDELKKFLDEELQHRVESFYADYNKMEEKPFVTEKGNGEEAVIKELHDP 591

Query: 602 MRKNVNHFLKIEEFIAKFMSCYKGEAN 613
           MRKNVNHFLKIEEFIAKFMSCYKGEAN
Sbjct: 603 MRKNVNHFLKIEEFIAKFMSCYKGEAN 591

[Close]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL
Match: A0A5D3D1K1 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003550 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 3.5e-224
Identity = 425/529 (80.34%), Postives = 451/529 (85.26%), Query Frame = 0


Query: 82  TPKTSPYYRGLTDSSLAINYHYGPLNSTPFHVTTTTPRGPHSYANSAATSTQSSLVSKFK 141
           +P  +PYYRGLTDSSLAINYH+GPLNSTP++VT         YA SAA STQSS+VSKFK
Sbjct: 13  SPLVTPYYRGLTDSSLAINYHHGPLNSTPYNVT---------YATSAAPSTQSSIVSKFK 72

Query: 142 DYWAPCLGKQQPHQPPSIPHNSNSKV-PYHHQRIQTVTT-TTVVAKTA--SLGSTSANNN 201
           +YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S GSTSA+ N
Sbjct: 73  EYWAPCLRKQQQQQQP--PHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASAN 132

Query: 202 KEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGD 261
            +EE    + +   +KKLLRERL VSNGG R D        GGGV VV EMEKE YSWGD
Sbjct: 133 FKEE--MSSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEKERYSWGD 192

Query: 262 KYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPM 321
            YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AFG+Q +
Sbjct: 193 NYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFGNQSV 252

Query: 322 EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNH 381
           E           SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH
Sbjct: 253 E-----------SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPLPCNH 312

Query: 382 TNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPP 441
            NCRGI LCEADQLSNETLMYVKWAIERNKGC+KIFFCC+DASKL LL S+CTLVHLSPP
Sbjct: 313 ANCRGISLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVHLSPP 372

Query: 442 SKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFEEDENKL 501
           SKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF+EDENKL
Sbjct: 373 SKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDEDENKL 432

Query: 502 LTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEEL 561
           LTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEEL
Sbjct: 433 LTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFLDEEL 492

Query: 562 QRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE 598
           QRRVEGFYADY K+EEK+FV ERGSGEE VVKGQ+DP+RKNVNHFLKIE
Sbjct: 493 QRRVEGFYADYYKLEEKAFVSERGSGEETVVKGQNDPVRKNVNHFLKIE 517

[Close]

BLAST of ClCG05G002630 vs. TAIR 10
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-44
Identity = 124/370 (33.51%), Postives = 205/370 (55.41%), Query Frame = 0


Query: 246 WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 305
           W DKYRPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G 
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62

Query: 306 QPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQ-LIKESHS 365
              ++K   + +  D  S  +  +E+    S+++VE+  S   GF+ + IVQ +IKE   
Sbjct: 63  SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAK 122

Query: 366 PLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRS 425
             P +    +G   ++L E D+LS E    ++  +E+     ++  CC+ +SK+   ++S
Sbjct: 123 NRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKS 182

Query: 426 LCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS 485
            C  V ++ PS++EIV+VLEF+AK++   L +  A RIA+ S  +LR+AI SLE    ++
Sbjct: 183 RCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN 242

Query: 486 QLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVD 545
             F  ++      WE+ +A++A  +++EQSPK+L+ VRGK+ +L+   + P  I + L+ 
Sbjct: 243 YPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLH 302

Query: 546 ELKKFLDEELQRRVEGFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEE 605
           EL K LD EL+  V  + A Y   E +  +G++                        IE 
Sbjct: 303 ELLKKLDSELKLEVCHWAAYY---EHRMRLGQKA--------------------IFHIEA 346

Query: 606 FIAKFMSCYK 609
           F+AKFMS YK
Sbjct: 363 FVAKFMSIYK 346

The following BLAST results are available for this feature:

BLAST of ClCG05G002630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438224.1	2.6e-282	84.36	PREDICTED: replication factor C subunit 3-like [Cucumis melo]	[more]
XP_011650816.1	1.1e-280	83.70	replication factor C subunit 3 [Cucumis sativus]	[more]
KAA0049072.1	7.1e-264	83.98	replication factor C subunit 3-like [Cucumis melo var. makuwa]	[more]
XP_022975501.1	6.0e-239	75.48	replication factor C subunit 3-like [Cucurbita maxima]	[more]
KAG6597225.1	3.1e-235	74.64	Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG05G002630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX4	2.0e-43	33.51	Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1	[more]
Q852K3	4.2e-41	31.52	Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ...	[more]
Q54BN3	2.4e-36	29.97	Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=...	[more]
Q8R323	1.6e-32	28.34	Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1	[more]
Q2TBV1	2.1e-32	28.34	Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1	[more]

BLAST of ClCG05G002630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AWH3	1.3e-282	84.36	replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4...	[more]
A0A5A7TZV7	3.4e-264	83.98	Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A6J1IEE5	2.9e-239	75.48	replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 ...	[more]
A0A6J1G337	7.5e-235	74.48	replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145035...	[more]
A0A5D3D1K1	3.5e-224	80.34	Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of ClCG05G002630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27740.1	1.4e-44	33.51	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..216
None	No IPR available	GENE3D	1.10.8.60		coord: 429..483 e-value: 4.3E-12 score: 47.4
None	No IPR available	GENE3D	1.20.272.10		coord: 491..607 e-value: 1.3E-24 score: 88.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..209
None	No IPR available	PANTHER	PTHR11669:SF52	OS10G0574500 PROTEIN	coord: 76..609
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 76..609
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 244..428 e-value: 1.4E-25 score: 92.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 244..480
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 491..555

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G002630.2	ClCG05G002630.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
molecular_function	GO:0003677	DNA binding