ClCG04G012510 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G012510
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pectate lyase
Location	CG_Chr04: 27334439 .. 27335826 (-)
RNA-Seq Expression	ClCG04G012510
Synteny	ClCG04G012510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTCACCACCACCCAACAACTCTTTGTTGTGTCTCTCATTTCTCTCACTCTCCTCACCACCGCAATTTTGTATTCAGAAGCCCATGGCTTGAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAGAAACAGGCAACAACTAGCCGTTTGCTCGGTTGGTTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCCACAATGATCAAACCCAAAGTCTGGATCACATTCCCAAAAGATATGCATATTGTGCTCAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCCACCGTCCACATCACCGGGAATGCGTGTTTGATGGTGTTCAAAGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAGGGCTCAGGCGGCGGGTCGAGTCATGGGCCCCGATTCCAAGATCATTTCACTTGGACACGTAGACGGTGATGCCATTCGTTTAGTAACTGCCTCCAAAGTGTGGATTGACCACAACACGCTGTACCGTTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGATCAAGACAAGGTTATTCTTCTTGGCCACGATGACGGTTATGTCCGAGATCGGAACATGAGAGTCACCGTCGTCTATAACCATTTTGGACCCAATTGCAACCAAAGAATGCCAAGGTAATATACGCCCGGTTTAAATTATACAAAATTTAAGGTATTTTTAATTTTTATATTTATATATATATATATATACTTTTATAATATTATGAAATAATTAAGATTGGTAAATAATTATTAAGCATAATGTTAATAATATACCCATTATGTAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCAAGCGTCAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAGTAACAAAAAATAGTAATATAAATTAATTTGTAAACAATAACATTGAATTGAAAATTGAGTTTTTATTATTAATGCAAATGCAGATTATATGGAGCACAGGGAAAGTAGAGGAGACGAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTTATTCGCGCAAATCGGTAAGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGCTTTCCGGTTGCAGATGCCAAGTGGCTTAGATCATTAACAGGCTCCTCCGGGGCATTGCGTTGCTCATCAAACTCAAAATGTTGA

mRNA sequence

ATGACGGTCACCACCACCCAACAACTCTTTGTTGTGTCTCTCATTTCTCTCACTCTCCTCACCACCGCAATTTTGTATTCAGAAGCCCATGGCTTGAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAGAAACAGGCAACAACTAGCCGTTTGCTCGGTTGGTTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCCACAATGATCAAACCCAAAGTCTGGATCACATTCCCAAAAGATATGCATATTGTGCTCAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCCACCGTCCACATCACCGGGAATGCGTGTTTGATGGTGTTCAAAGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAGGGCTCAGGCGGCGGGTCGAGTCATGGGCCCCGATTCCAAGATCATTTCACTTGGACACGTAGACGGTGATGCCATTCGTTTAGTAACTGCCTCCAAAGTGTGGATTGACCACAACACGCTGTACCGTTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGATCAAGACAAGGTTATTCTTCTTGGCCACGATGACGGTTATGTCCGAGATCGGAACATGAGAGTCACCGTCGTCTATAACCATTTTGGACCCAATTGCAACCAAAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCAAGCGTCAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAATTATATGGAGCACAGGGAAAGTAGAGGAGACGAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTTATTCGCGCAAATCGGTAAGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGCTTTCCGGTTGCAGATGCCAAGTGGCTTAGATCATTAACAGGCTCCTCCGGGGCATTGCGTTGCTCATCAAACTCAAAATGTTGA

Coding sequence (CDS)

ATGACGGTCACCACCACCCAACAACTCTTTGTTGTGTCTCTCATTTCTCTCACTCTCCTCACCACCGCAATTTTGTATTCAGAAGCCCATGGCTTGAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAGAAACAGGCAACAACTAGCCGTTTGCTCGGTTGGTTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCCACAATGATCAAACCCAAAGTCTGGATCACATTCCCAAAAGATATGCATATTGTGCTCAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCCACCGTCCACATCACCGGGAATGCGTGTTTGATGGTGTTCAAAGCCACCAACATCATAATCCACGGCCTTATCATCCACCACTGCAGGGCTCAGGCGGCGGGTCGAGTCATGGGCCCCGATTCCAAGATCATTTCACTTGGACACGTAGACGGTGATGCCATTCGTTTAGTAACTGCCTCCAAAGTGTGGATTGACCACAACACGCTGTACCGTTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGATCAAGACAAGGTTATTCTTCTTGGCCACGATGACGGTTATGTCCGAGATCGGAACATGAGAGTCACCGTCGTCTATAACCATTTTGGACCCAATTGCAACCAAAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCAAGCGTCAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAATTATATGGAGCACAGGGAAAGTAGAGGAGACGAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTTATTCGCGCAAATCGGTAAGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGCTTTCCGGTTGCAGATGCCAAGTGGCTTAGATCATTAACAGGCTCCTCCGGGGCATTGCGTTGCTCATCAAACTCAAAATGTTGA

Protein sequence

MTVTTTQQLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC

Homology

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BLAST of ClCG04G012510 vs. NCBI nr
Match: KGN63970.1 (hypothetical protein Csa_014255 [Cucumis sativus])

HSP 1 Score: 715.7 bits (1846), Expect = 2.1e-202
Identity = 341/384 (88.80%), Postives = 367/384 (95.57%), Query Frame = 0


Query: 1   MTVTTTQQLFVVSLIS-LTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSV 60
           MT TTTQQL V+SLIS + L++TA+ YSEAHGLNMNAIDRCWRSNPYWR+NRQQLA CSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKP 120
           GFAGKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHIVL+KP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISL 180
           LL+SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAG+VMGP++K+ISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           G+VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPV 360
           NLFIASKSKQ+IWSTGKVEE KWKFHSVRD FENGA FA+IG G+G VKPNYN QQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWLRSLTGSSGALRCSSNSKC 384
           ADAKW+R+LT SSGALRC+SNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of ClCG04G012510 vs. NCBI nr
Match: XP_008439120.1 (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 714.9 bits (1844), Expect = 3.7e-202
Identity = 343/382 (89.79%), Postives = 361/382 (94.50%), Query Frame = 0


Query: 3   VTTTQQLFVVSLIS-LTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGF 62
           +T TQQL V+SLIS + L++  +  SEAHGL+MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 63  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLL 122
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHIVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 123 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGH 182
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG VMGP+SK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 183 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 242
           VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 243 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 302
           VRDRNM+VTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 303 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVAD 362
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGALF +IG GRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 363 AKWLRSLTGSSGALRCSSNSKC 384
           AKW+R+LT SSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of ClCG04G012510 vs. NCBI nr
Match: XP_022923821.1 (putative pectate lyase 2 [Cucurbita moschata])

HSP 1 Score: 703.4 bits (1814), Expect = 1.1e-198
Identity = 335/376 (89.10%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 8   QLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 67
           QLFV+SLISLTLL +A+ YSE +GL MNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLL-SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 68  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTA 127
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHI+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 128 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAI 187
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AG+VMGP+SK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 188 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 247
           RLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 248 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 307
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 308 KQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRS 367
           KQI+WSTGKVE  KWKFHSVRDVFENGA F QIG GRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 368 LTGSSGALRCSSNSKC 384
           LT SSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of ClCG04G012510 vs. NCBI nr
Match: KAG7020030.1 (putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 703.4 bits (1814), Expect = 1.1e-198
Identity = 335/376 (89.10%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 8   QLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 67
           QLFV+SLISLTLL +A+ YSE +GL MNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLL-SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 68  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTA 127
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHI+L KPLLISS+TA
Sbjct: 65  NVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 128 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAI 187
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AG+VMGP+SK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 188 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 247
           RLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 248 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 307
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 308 KQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRS 367
           KQI+WSTGKVE  KWKFHSVRDVFENGA F QIG GRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 368 LTGSSGALRCSSNSKC 384
           LT SSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of ClCG04G012510 vs. NCBI nr
Match: XP_023520094.1 (putative pectate lyase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 701.0 bits (1808), Expect = 5.5e-198
Identity = 334/376 (88.83%), Postives = 357/376 (94.95%), Query Frame = 0


Query: 8   QLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 67
           QLFV+SLISLTLL +A+ YSE +GL MNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLL-SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 68  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTA 127
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATM+K KVWITF KDMHI+L KPLLISS+TA
Sbjct: 65  NVGRNLIRYQVTDPSDDPINPRPGTLRYGATMMKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 128 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAI 187
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AG+VMGP+SK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 188 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 247
           RLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDMNM 244

Query: 248 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 307
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 308 KQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRS 367
           KQI+WSTGKVE  KWKFHSVRDVFENGA F QIG GRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 368 LTGSSGALRCSSNSKC 384
           LT SSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-90
Identity = 172/384 (44.79%), Postives = 235/384 (61.20%), Query Frame = 0


Query: 9   LFVVSLISLTLLTTAILYSEAHGLNM-----NAIDRCWRSNPYWRRNRQQLAVCSVGFAG 68
           L ++SL+     ++ +  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 69  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLIS 128
                 G+    Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 129 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVD 188
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +GRV    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 189 GDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 248
           GDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 249 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 308
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 309 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPV 368
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 369 ADAKWLRSLTGSSGALRCSSNSKC 384
           +    +  LT S+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot
Match: O65457 (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.2e-86
Identity = 163/353 (46.18%), Postives = 213/353 (60.34%), Query Frame = 0


Query: 34  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 93
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 94  RYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 153
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 154 HGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 213
           HG+ IH C+   +G+V    + +      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 214 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 273
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 274 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 333
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 334 FENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC 384
           F+NGA F  +  G G +   Y++ QRF VA    + SLT  +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.2e-86
Identity = 175/370 (47.30%), Postives = 226/370 (61.08%), Query Frame = 0


Query: 19  LLTTAILYS-EAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQ 78
           LL TA  Y+  A  +++N ID CWR NP W  NRQ LA C+VG+ GK     G+N   Y 
Sbjct: 19  LLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG-GKNGPIYV 78

Query: 79  VTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHI 138
           VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  IDGRGA V I
Sbjct: 79  VTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTIDGRGAKVEI 138

Query: 139 TGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWI 198
               CL + +  ++IIHG+ IH C+A   G              +DGD IR+  ++ VWI
Sbjct: 139 ANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRVFQSTHVWI 198

Query: 199 DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFG 258
           DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRVT+ +N FG
Sbjct: 199 DHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFG 258

Query: 259 PNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKV 318
           P   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + +     T ++
Sbjct: 259 PGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRM 318

Query: 319 ----EETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSG 378
               +  +WK+ + RDVF NGA F   G     V+P Y   + F VA    + SLT S+G
Sbjct: 319 MAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLVPSLTSSAG 368

Query: 379 ALRCSSNSKC 384
            LRC     C
Sbjct: 379 PLRCYVGRIC 368

[Close]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot
Match: O65456 (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.5e-86
Identity = 163/353 (46.18%), Postives = 213/353 (60.34%), Query Frame = 0


Query: 34  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 93
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 94  RYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 153
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 154 HGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 213
           HG+ IH C+    G V    + +      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 214 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 273
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 274 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 333
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 334 FENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC 384
           F+NGA F  +  G G +   Y++ QRF VA    + SLT  +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot
Match: P18632 (Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE=1 SV=3)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-84
Identity = 166/357 (46.50%), Postives = 216/357 (60.50%), Query Frame = 0


Query: 35  NAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLR 94
           N ID CWR +  W +NR +LA C+VGF        G +L  Y VT+  DDP+NP PGTLR
Sbjct: 23  NPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDL--YTVTNSDDDPVNPAPGTLR 82

Query: 95  YGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHI-TGNACLMVFKATNIII 154
           YGAT  +P +WI F  +M+I LK P+ I+ +   DGRGA V+I  G  C+ + + +N+II
Sbjct: 83  YGATRDRP-LWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVII 142

Query: 155 HGLIIHHCRAQAAGRVMGPDSKIISLGH-VDGDAIRLVTASKVWIDHNTLYRCEDGLLDV 214
           HGL ++ C     G V+  +S  +   H  DGDA+ L TA+ +WIDHN+     DGL+DV
Sbjct: 143 HGLYLYGCSTSVLGNVLINESFGVEPVHPQDGDALTLRTATNIWIDHNSFSNSSDGLVDV 202

Query: 215 TRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYA 274
           T  ST +TISNN F +  KV+LLGHDD Y  D++M+VTV +N FGPNC QRMPR RYG  
Sbjct: 203 TLTSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAFNQFGPNCGQRMPRARYGLV 262

Query: 275 HVANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTG---KVEETKWKFHS 334
           HVANN Y  WT YAIGGS NP++ SE N F A   S  KQ+    G       + W + S
Sbjct: 263 HVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQVTIRIGCKTSSSCSNWVWQS 322

Query: 335 VRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC 384
            +DVF NGA F   GK  GG    Y  ++ F V +      LT ++G L CS + +C
Sbjct: 323 TQDVFYNGAYFVSSGKYEGG--NIYTKKEAFNVENGNATPQLTKNAGVLTCSLSKRC 374

[Close]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL
Match: A0A0A0LPZ1 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.0e-202
Identity = 341/384 (88.80%), Postives = 367/384 (95.57%), Query Frame = 0


Query: 1   MTVTTTQQLFVVSLIS-LTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSV 60
           MT TTTQQL V+SLIS + L++TA+ YSEAHGLNMNAIDRCWRSNPYWR+NRQQLA CSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKP 120
           GFAGKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHIVL+KP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISL 180
           LL+SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAG+VMGP++K+ISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           G+VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPV 360
           NLFIASKSKQ+IWSTGKVEE KWKFHSVRD FENGA FA+IG G+G VKPNYN QQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWLRSLTGSSGALRCSSNSKC 384
           ADAKW+R+LT SSGALRC+SNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL
Match: A0A1S3AY18 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.8e-202
Identity = 343/382 (89.79%), Postives = 361/382 (94.50%), Query Frame = 0


Query: 3   VTTTQQLFVVSLIS-LTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGF 62
           +T TQQL V+SLIS + L++  +  SEAHGL+MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 63  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLL 122
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHIVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 123 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGH 182
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG VMGP+SK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 183 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 242
           VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 243 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 302
           VRDRNM+VTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 303 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVAD 362
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGALF +IG GRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 363 AKWLRSLTGSSGALRCSSNSKC 384
           AKW+R+LT SSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL
Match: A0A6J1E7R9 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.3e-199
Identity = 335/376 (89.10%), Postives = 358/376 (95.21%), Query Frame = 0


Query: 8   QLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 67
           QLFV+SLISLTLL +A+ YSE +GL MNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLL-SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 68  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTA 127
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHI+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 128 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAI 187
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AG+VMGP+SK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 188 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 247
           RLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 248 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 307
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 308 KQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRS 367
           KQI+WSTGKVE  KWKFHSVRDVFENGA F QIG GRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 368 LTGSSGALRCSSNSKC 384
           LT SSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL
Match: A0A6J1KLU6 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.9e-196
Identity = 331/376 (88.03%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 8   QLFVVSLISLTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 67
           QLFV+SLISLTLL +A+ YSE +GL MNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLL-SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 68  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTA 127
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF K MHI+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKGMHILLHKPLLISSYTA 124

Query: 128 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAI 187
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AG+VMGP+SK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 188 RLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 247
           RLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 248 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 307
           RVTV+YNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 
Sbjct: 245 RVTVIYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKL 304

Query: 308 KQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRS 367
           KQI+WSTGKVE  KWKFHSV DVFENGA F QIG GRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVGDVFENGASFEQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 368 LTGSSGALRCSSNSKC 384
           LT SSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL
Match: A0A5D3BIF3 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 PE=3 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.8e-189
Identity = 330/382 (86.39%), Postives = 348/382 (91.10%), Query Frame = 0


Query: 3   VTTTQQLFVVSLIS-LTLLTTAILYSEAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGF 62
           +T TQQL V+SLIS + L++  +  SEAHGL+MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 63  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLL 122
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF KDMHIVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 123 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGH 182
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG VMGP+SK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 183 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 242
           VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 243 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 302
           VRDRNM+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 303 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVAD 362
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGALF +IG GRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 363 AKWLRSLTGSSGALRCSSNSKC 384
           AKW+R+LT SSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of ClCG04G012510 vs. TAIR 10
Match: AT5G09280.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 2.3e-114
Identity = 186/255 (72.94%), Postives = 224/255 (87.84%), Query Frame = 0


Query: 65  MTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISS 124
           MT N+G+ + +Y+VTDPSDDP+NP+PGTLRYGAT++K K WITF ++M I L KPLLISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 125 FTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDG 184
           FTA+DGRGA+VHI+G ACL+V++AT++IIHGL IH C+A     VMGPDSKII LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 185 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 244
           DAIRLVTA KVWIDHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGHDDGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 245 RNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 304
           ++MRVTVV+NHFGPNCNQRMPR+R+GYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 305 SK--SKQIIWSTGKV 318
            K  SK+++   G +
Sbjct: 241 PKSGSKEVLEKHGPI 255

[Close]

BLAST of ClCG04G012510 vs. TAIR 10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-91
Identity = 172/384 (44.79%), Postives = 235/384 (61.20%), Query Frame = 0


Query: 9   LFVVSLISLTLLTTAILYSEAHGLNM-----NAIDRCWRSNPYWRRNRQQLAVCSVGFAG 68
           L ++SL+     ++ +  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 69  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLIS 128
                 G+    Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 129 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVD 188
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +GRV    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 189 GDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 248
           GDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 249 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 308
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 309 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPV 368
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 369 ADAKWLRSLTGSSGALRCSSNSKC 384
           +    +  LT S+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of ClCG04G012510 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 321.6 bits (823), Expect = 8.4e-88
Identity = 175/370 (47.30%), Postives = 226/370 (61.08%), Query Frame = 0


Query: 19  LLTTAILYS-EAHGLNMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQ 78
           LL TA  Y+  A  +++N ID CWR NP W  NRQ LA C+VG+ GK     G+N   Y 
Sbjct: 19  LLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG-GKNGPIYV 78

Query: 79  VTDPSDDPINPRPGTLRYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHI 138
           VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  IDGRGA V I
Sbjct: 79  VTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTIDGRGAKVEI 138

Query: 139 TGNACLMVFKATNIIIHGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWI 198
               CL + +  ++IIHG+ IH C+A   G              +DGD IR+  ++ VWI
Sbjct: 139 ANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRVFQSTHVWI 198

Query: 199 DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFG 258
           DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRVT+ +N FG
Sbjct: 199 DHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFG 258

Query: 259 PNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKV 318
           P   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + +     T ++
Sbjct: 259 PGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRM 318

Query: 319 ----EETKWKFHSVRDVFENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSG 378
               +  +WK+ + RDVF NGA F   G     V+P Y   + F VA    + SLT S+G
Sbjct: 319 MAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLVPSLTSSAG 368

Query: 379 ALRCSSNSKC 384
            LRC     C
Sbjct: 379 PLRCYVGRIC 368

[Close]

BLAST of ClCG04G012510 vs. TAIR 10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 321.6 bits (823), Expect = 8.4e-88
Identity = 163/353 (46.18%), Postives = 213/353 (60.34%), Query Frame = 0


Query: 34  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 93
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 94  RYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 153
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 154 HGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 213
           HG+ IH C+   +G+V    + +      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 214 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 273
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 274 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 333
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 334 FENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC 384
           F+NGA F  +  G G +   Y++ QRF VA    + SLT  +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of ClCG04G012510 vs. TAIR 10
Match: AT4G22080.1 (root hair specific 14 )

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-87
Identity = 163/353 (46.18%), Postives = 213/353 (60.34%), Query Frame = 0


Query: 34  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 93
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 94  RYGATMIKPKVWITFPKDMHIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 153
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 154 HGLIIHHCRAQAAGRVMGPDSKIISLGHVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 213
           HG+ IH C+    G V    + +      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 214 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 273
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 274 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 333
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 334 FENGALFAQIGKGRGGVKPNYNAQQRFPVADAKWLRSLTGSSGALRCSSNSKC 384
           F+NGA F  +  G G +   Y++ QRF VA    + SLT  +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

The following BLAST results are available for this feature:

BLAST of ClCG04G012510 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63970.1	2.1e-202	88.80	hypothetical protein Csa_014255 [Cucumis sativus]	[more]
XP_008439120.1	3.7e-202	89.79	PREDICTED: putative pectate lyase 2 [Cucumis melo]	[more]
XP_022923821.1	1.1e-198	89.10	putative pectate lyase 2 [Cucurbita moschata]	[more]
KAG7020030.1	1.1e-198	89.10	putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023520094.1	5.5e-198	88.83	putative pectate lyase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG04G012510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65388	2.3e-90	44.79	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
O65457	1.2e-86	46.18	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
Q9C8G4	1.2e-86	47.30	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
O65456	1.5e-86	46.18	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
P18632	1.1e-84	46.50	Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE=1 SV=3	[more]

BLAST of ClCG04G012510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ1	1.0e-202	88.80	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1	[more]
A0A1S3AY18	1.8e-202	89.79	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1	[more]
A0A6J1E7R9	5.3e-199	89.10	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1	[more]
A0A6J1KLU6	1.9e-196	88.03	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1	[more]
A0A5D3BIF3	3.8e-189	86.39	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 ...	[more]

BLAST of ClCG04G012510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09280.1	2.3e-114	72.94	Pectin lyase-like superfamily protein	[more]
AT1G11920.1	1.6e-91	44.79	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	8.4e-88	47.30	Pectin lyase-like superfamily protein	[more]
AT4G22090.1	8.4e-88	46.18	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	1.1e-87	46.18	root hair specific 14	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 119..135 score: 50.7 coord: 57..74 score: 22.75 coord: 285..304 score: 58.57 coord: 354..377 score: 29.17 coord: 263..282 score: 62.62 coord: 183..204 score: 48.48
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 111..308 e-value: 9.9E-70 score: 247.6
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 123..302 e-value: 1.4E-24 score: 86.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 34..376 e-value: 7.5E-94 score: 316.5
None	No IPR available	PANTHER	PTHR31683:SF74	PECTATE LYASE	coord: 20..380
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 20..380
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 34..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G012510.1	ClCG04G012510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity