ClCG04G011190 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G011190
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	heavy metal-associated isoprenylated plant protein 7-like
Location	CG_Chr04: 26209397 .. 26210722 (+)
RNA-Seq Expression	ClCG04G011190
Synteny	ClCG04G011190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGAGGAACAAAGCCAAGAAGCCAAGAATAATGAACAGCCTACAAACCACAATGCAGAATCAGGTTCCAAATATCAATATTAACAATATTATTATTATTATTATTATTATTATTATTATTCAGTGTCTTGATATTCTCTCACCAATCAATACTATCGTTAAACCCAGATTTTCAAGTCCATCCCTTTCAAGTTCAGTGAAAAAACCCATCAGTTTTCTCTCTGTTTCTGTGTTTAAGCATCATATTGGTTTAGATTCTTGGAGAAAGGTTCTGTTTTTGACAGAGATTTAATGACAGGAAAGGCAAGTTCAATCTCACCAACTCTCCATTCTTCTTCTCCTTCCAAGCTTCATTGGCATTATTTTACTGTTTTCCATTGACAACTATGGCAGTTTTGGTGCATGGTTTTGAGAATTCACATGGACTGCAATGGATGTTACAGGAAAGTGAGAAGAGCTATTCTCAGTATAAAAGGTGAAATCTCTCTCTTCCACTGTTTATTTTTCTCTAGAGAAATTATTCAACGGGGCTACTAAAACAATATGGCTGACTATTTCAAACCATTCAGAGTAAGAGAGAAATTAAACACTGTTGTTTACCAAGCAAATAATGGTTAGAGTTTGGAGGACAGCCATGTTATGGCAGTCAGATTAAACAATTTCCTATCTCTCTCACCCTCTATGTCCTTGTTCTGATTAAGGATGAGACATCAATATTAAATATCCAAGAATATCTCCAACATTTTTTATAAATGCTTGCAAAAACATAAAAAAGAATATCATCTATTTAGTCCAATATGAATATGAGAATACTAATAACAATATCTATAACCTAGTTTAAGAGTAAAAACAACTTAATTATAAAACTAAATAAGTTCTATAAATTTCGTGACTCATAGATATTTTATAGATATATCCATAAGATTGAAGTCTCAATATTGATATCGAAATTAATATTTTAATCTTTGGTTCTGGATTGACTTAGACTCTTCAATTGATTCTACTTGGTAACTTATGACATGAGTCCTTGTCATCTTGATAGAGTTGGAGACCCATTTGATAGAACAAAAGCAGTGCAAGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAAACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGTTGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGAATTAGCTTCTACTATAACATAAAC

mRNA sequence

ATGAAAAAGAGGAACAAAGCCAAGAAGCCAAGAATAATGAACAGCCTACAAACCACAATGCAGAATCAGAGATTTAATGACAGGAAAGGCAAGTTCAATCTCACCAACTCTCCATTCTTCTTCTCCTTCCAAGCTTCATTGGCATTATTTTACTGTTTTCCATTGACAACTATGGCAGTTTTGGTGCATGGTTTTGAGAATTCACATGGACTGCAATGGATGTTACAGGAAAGTGAGAAGAGCTATTCTCAGTATAAAAGAGTAAGAGAGAAATTAAACACTGTTGTTTACCAAGCAAATAATGAGTTGGAGACCCATTTGATAGAACAAAAGCAGTGCAAGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAAACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGTTGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGAATTAGCTTCTACTATAACATAAAC

Coding sequence (CDS)

ATGAAAAAGAGGAACAAAGCCAAGAAGCCAAGAATAATGAACAGCCTACAAACCACAATGCAGAATCAGAGATTTAATGACAGGAAAGGCAAGTTCAATCTCACCAACTCTCCATTCTTCTTCTCCTTCCAAGCTTCATTGGCATTATTTTACTGTTTTCCATTGACAACTATGGCAGTTTTGGTGCATGGTTTTGAGAATTCACATGGACTGCAATGGATGTTACAGGAAAGTGAGAAGAGCTATTCTCAGTATAAAAGAGTAAGAGAGAAATTAAACACTGTTGTTTACCAAGCAAATAATGAGTTGGAGACCCATTTGATAGAACAAAAGCAGTGCAAGGTAAGCGTTTGTGGAAAGTTTAGCCCTCAAGATATAGCAATCAAAATAAGGAAGAAAACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAATGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGACCAAGTTGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGAATTAG

Protein sequence

MKKRNKAKKPRIMNSLQTTMQNQRFNDRKGKFNLTNSPFFFSFQASLALFYCFPLTTMAVLVHGFENSHGLQWMLQESEKSYSQYKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEKN

Homology

[Close]

BLAST of ClCG04G011190 vs. NCBI nr
Match: XP_008457333.1 (PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-42
Identity = 91/127 (71.65%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 60  VLVHGFENSHGLQWMLQESEKSYSQYKRVREKLNTVVYQANNELETHLIEQKQCKVSVCG 119
           V +HGFENS+GLQWMLQES+KSYSQYKR                           VSVCG
Sbjct: 22  VFLHGFENSYGLQWMLQESKKSYSQYKR---------------------------VSVCG 81

Query: 120 KFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKH 179
           KFSPQDIAIKIRKKTNRRVEILE+QECDTF ENNDIQGPLIINAWKCQSNYDQVETCC H
Sbjct: 82  KFSPQDIAIKIRKKTNRRVEILEVQECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTH 121

Query: 180 EGDTEEK 187
           EGDT+E+
Sbjct: 142 EGDTKEQ 121

[Close]

BLAST of ClCG04G011190 vs. NCBI nr
Match: XP_038895027.1 (heavy metal-associated isoprenylated plant protein 7-like [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQKQC+VSVCGKFSPQDIAIKIRKKTNRRVEILEIQ
Sbjct: 20  YRKVRRAILSI-----KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK
Sbjct: 80  ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 116

[Close]

BLAST of ClCG04G011190 vs. NCBI nr
Match: XP_011650508.1 (heavy metal-associated isoprenylated plant protein 7 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39
Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQKQC+VSVCGKFSPQDIAIKIRKKTNRRVEILEIQ
Sbjct: 20  YRKVRRAILSI-----KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTF ENN IQGPLIINAWKCQSNYDQVETCCKHEGDT+E+
Sbjct: 80  ECDTFNENNGIQGPLIINAWKCQSNYDQVETCCKHEGDTKEQ 116

[Close]

BLAST of ClCG04G011190 vs. NCBI nr
Match: KAE8652538.1 (hypothetical protein Csa_013540 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39
Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQKQC+VSVCGKFSPQDIAIKIRKKTNRRVEILEIQ
Sbjct: 13  YRKVRRAILSI-----KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 72

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTF ENN IQGPLIINAWKCQSNYDQVETCCKHEGDT+E+
Sbjct: 73  ECDTFNENNGIQGPLIINAWKCQSNYDQVETCCKHEGDTKEQ 109

[Close]

BLAST of ClCG04G011190 vs. NCBI nr
Match: XP_008457410.1 (PREDICTED: uncharacterized protein LOC103497018 isoform X2 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 9.6e-39
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQK C+VSVCGKFSPQDIAIKIRKKTNRRVEILE+Q
Sbjct: 20  YRKVRRAILSI-----KELETHLIEQKHCRVSVCGKFSPQDIAIKIRKKTNRRVEILEVQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTF ENNDIQGPLIINAWKCQSNYDQVETCC HEGDT+E+
Sbjct: 80  ECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTHEGDTKEQ 116

[Close]

BLAST of ClCG04G011190 vs. ExPASy TrEMBL
Match: A0A1S3C5D5 (uncharacterized protein LOC103497018 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497018 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 91/127 (71.65%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 60  VLVHGFENSHGLQWMLQESEKSYSQYKRVREKLNTVVYQANNELETHLIEQKQCKVSVCG 119
           V +HGFENS+GLQWMLQES+KSYSQYKR                           VSVCG
Sbjct: 22  VFLHGFENSYGLQWMLQESKKSYSQYKR---------------------------VSVCG 81

Query: 120 KFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKH 179
           KFSPQDIAIKIRKKTNRRVEILE+QECDTF ENNDIQGPLIINAWKCQSNYDQVETCC H
Sbjct: 82  KFSPQDIAIKIRKKTNRRVEILEVQECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTH 121

Query: 180 EGDTEEK 187
           EGDT+E+
Sbjct: 142 EGDTKEQ 121

[Close]

BLAST of ClCG04G011190 vs. ExPASy TrEMBL
Match: A0A0A0LSZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042260 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQKQC+VSVCGKFSPQDIAIKIRKKTNRRVEILEIQ
Sbjct: 20  YRKVRRAILSI-----KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTF ENN IQGPLIINAWKCQSNYDQVETCCKHEGDT+E+
Sbjct: 80  ECDTFNENNGIQGPLIINAWKCQSNYDQVETCCKHEGDTKEQ 116

[Close]

BLAST of ClCG04G011190 vs. ExPASy TrEMBL
Match: A0A1S3C512 (uncharacterized protein LOC103497018 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497018 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.7e-39
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  + ++      ELETHLIEQK C+VSVCGKFSPQDIAIKIRKKTNRRVEILE+Q
Sbjct: 20  YRKVRRAILSI-----KELETHLIEQKHCRVSVCGKFSPQDIAIKIRKKTNRRVEILEVQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTF ENNDIQGPLIINAWKCQSNYDQVETCC HEGDT+E+
Sbjct: 80  ECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTHEGDTKEQ 116

[Close]

BLAST of ClCG04G011190 vs. ExPASy TrEMBL
Match: A0A6J1C7L3 (heavy metal-associated isoprenylated plant protein 28-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111008982 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 6.1e-39
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  L ++      ELETHLIEQKQC+VSVCGKFSPQD+AIKIRKKTNRRVEILEIQ
Sbjct: 20  YRKVRRALLSI-----KELETHLIEQKQCRVSVCGKFSPQDVAIKIRKKTNRRVEILEIQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTFTENNDIQGPLIIN WKC+SNYDQ ETCC HEGDTE++
Sbjct: 80  ECDTFTENNDIQGPLIINPWKCRSNYDQAETCCMHEGDTEKE 116

[Close]

BLAST of ClCG04G011190 vs. ExPASy TrEMBL
Match: A0A6J1KGG9 (heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111495042 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 85  YKRVREKLNTVVYQANNELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 144
           Y++VR  L ++      ELE HLIEQKQC+VSVCGKFSPQDIAIKIRKKTNRRVEILEIQ
Sbjct: 20  YRKVRRALLSI-----KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQ 79

Query: 145 ECDTFTENNDIQGPLIINAWKCQSNYDQVETCCKHEGDTEEK 187
           ECDTFTENNDIQGP IINAWKCQSNYDQ E CCKHEG+ EEK
Sbjct: 80  ECDTFTENNDIQGPFIINAWKCQSNYDQAEICCKHEGNKEEK 116

[Close]

BLAST of ClCG04G011190 vs. TAIR 10
Match: AT3G25855.1 (Copper transport protein family )

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 21/44 (47.73%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 102 ELETHLIEQKQCKVSVCGKFSPQDIAIKIRKKTNRRVEILEIQE 146
           E++TH+I +K+ +V +CG+F P D+A+K+++K  RRVEILE+++
Sbjct: 33  EVDTHMINKKERQVILCGRFRPSDVALKLQRKMKRRVEILEVED 76

The following BLAST results are available for this feature:

BLAST of ClCG04G011190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457333.1	3.2e-42	71.65	PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo]	[more]
XP_038895027.1	1.2e-41	85.29	heavy metal-associated isoprenylated plant protein 7-like [Benincasa hispida]	[more]
XP_011650508.1	2.5e-39	81.37	heavy metal-associated isoprenylated plant protein 7 [Cucumis sativus]	[more]
KAE8652538.1	2.5e-39	81.37	hypothetical protein Csa_013540 [Cucumis sativus]	[more]
XP_008457410.1	9.6e-39	79.41	PREDICTED: uncharacterized protein LOC103497018 isoform X2 [Cucumis melo]	[more]

BLAST of ClCG04G011190 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG04G011190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5D5	1.5e-42	71.65	uncharacterized protein LOC103497018 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LSZ0	1.2e-39	81.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042260 PE=4 SV=1	[more]
A0A1S3C512	4.7e-39	79.41	uncharacterized protein LOC103497018 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1C7L3	6.1e-39	79.41	heavy metal-associated isoprenylated plant protein 28-like isoform X4 OS=Momordi...	[more]
A0A6J1KGG9	1.4e-38	80.39	heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita maxima OX...	[more]

BLAST of ClCG04G011190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25855.1	5.5e-08	47.73	Copper transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47294	OS08G0431150 PROTEIN	coord: 102..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G011190.1	ClCG04G011190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding