Homology
BLAST of ClCG04G009240 vs. NCBI nr
Match:
XP_038882876.1 (RNA polymerase sigma factor sigF, chloroplastic [Benincasa hispida])
HSP 1 Score: 1005.4 bits (2598), Expect = 2.0e-289
Identity = 527/569 (92.62%), Postives = 537/569 (94.38%), Query Frame = 0
Query: 1 MEAGLNLLSSSSPFISRCHPRSFLPPSCSSSSSSSSSSVSMFHEQATPARYFSTSFLSQE 60
MEAGLNLLSSSS FISRCHPRSFL PSC SSSSSSSSVSMFHEQA PARYFSTSFLSQE
Sbjct: 1 MEAGLNLLSSSSLFISRCHPRSFLHPSC--SSSSSSSSVSMFHEQAIPARYFSTSFLSQE 60
Query: 61 QHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSDLDHLVWELKHQAVEWPGLLS 120
QHHECRPQS+ILKDDRTSQ TLDRRLIERSVSIDE +RSD DHL+WE KHQAVEWPGLLS
Sbjct: 61 QHHECRPQSQILKDDRTSQTTLDRRLIERSVSIDEGNRSDHDHLIWEFKHQAVEWPGLLS 120
Query: 121 SWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQAALFVDESELVG 180
SWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQAA VDESELVG
Sbjct: 121 SWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQAASLVDESELVG 180
Query: 181 TNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRSKKRKKPKHVTTIHETSNSRG 240
TNLDYTSPDD SLSKEGRTV+STRLQDRRSKKRK PKHVTTIHETSNS+G
Sbjct: 181 TNLDYTSPDD-----------SLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNSKG 240
Query: 241 KDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQSQFG 300
KDSRRKT ENFDPNDPLRLFLWGPETKKLLT +EES LIVQIQDLMIL+NVKARLQSQFG
Sbjct: 241 KDSRRKTIENFDPNDPLRLFLWGPETKKLLTVEEESELIVQIQDLMILDNVKARLQSQFG 300
Query: 301 REPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQ 360
REPTLVEWAEALGLTCQRLQSQL SFRISREKLINANLRMVVHIAKQYQGRGLSL DLLQ
Sbjct: 301 REPTLVEWAEALGLTCQRLQSQLQSFRISREKLINANLRMVVHIAKQYQGRGLSLQDLLQ 360
Query: 361 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEA 420
EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEA
Sbjct: 361 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEA 420
Query: 421 KNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEITADS 480
KNYFVRAGNYKPSKEELAAR GITVERLDKLLFMSRIPRSLQQ VW DQDTTFQEITADS
Sbjct: 421 KNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWTDQDTTFQEITADS 480
Query: 481 EVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKER 540
E+DTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKER
Sbjct: 481 ELDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKER 540
Query: 541 VRQLENRALYKLKRCCNSQGLGAYADILT 570
VRQLENRALYKLKRC NSQGLGAYAD+LT
Sbjct: 541 VRQLENRALYKLKRCSNSQGLGAYADLLT 556
BLAST of ClCG04G009240 vs. NCBI nr
Match:
XP_031742499.1 (RNA polymerase sigma factor sigF, chloroplastic [Cucumis sativus] >KGN48180.1 hypothetical protein Csa_003758 [Cucumis sativus])
HSP 1 Score: 969.9 bits (2506), Expect = 9.4e-279
Identity = 507/573 (88.48%), Postives = 529/573 (92.32%), Query Frame = 0
Query: 1 MEAGLNLLSSSSPFISRCHPRSFLPPSCSS----SSSSSSSSVSMFHEQATPARYFSTSF 60
MEAGLNLLSSSSPFISRCHPRSFL PSCSS SSSSSSSSV MF EQA+PARYFSTSF
Sbjct: 1 MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSF 60
Query: 61 LSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSDLDHLVWELKHQAVEWP 120
LSQEQHHECRPQS+ILKDDR+SQMTL+RRLIERSV IDE SR D DHL+WELKHQAVEWP
Sbjct: 61 LSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWP 120
Query: 121 GLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQAALFVDES 180
GLLSSWP +QMEEYKISS+EK+SYNA GEMLVKDEPENVIALAKKALSASKQAAL VDE+
Sbjct: 121 GLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDET 180
Query: 181 ELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRSKKRKKPKHVTTIHETS 240
ELVGT+LDY+S DD SLSKEGRTV+STRLQDRRSKKRK PKHVTTI E S
Sbjct: 181 ELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEIS 240
Query: 241 NSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQ 300
N RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES LIVQIQDLMIL+NVKARLQ
Sbjct: 241 NFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQ 300
Query: 301 SQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLH 360
SQF REPTLVEWAEALG+TCQ LQSQLH F+ SREKLINANLRMVVHIAKQYQGRGLSLH
Sbjct: 301 SQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLH 360
Query: 361 DLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK 420
DLLQ GSLGLMKSVEKFKPQAGCRF +YAYWWIR SI KAIF+HSRTIRLPENVY LLGK
Sbjct: 361 DLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGK 420
Query: 421 VTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEI 480
VTEAKNYFVRAGNYKPSKEELAAR GITVER DKL+FMSRIPRSLQQ VWADQ+TTFQEI
Sbjct: 421 VTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEI 480
Query: 481 TADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGL 540
TADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGL
Sbjct: 481 TADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGL 540
Query: 541 SKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
SKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 541 SKERVRQLENRALYKLKRCCNSQGLGAYADLLT 562
BLAST of ClCG04G009240 vs. NCBI nr
Match:
XP_016902883.1 (PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo] >XP_016902884.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 927.9 bits (2397), Expect = 4.1e-266
Identity = 480/531 (90.40%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 314 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 373
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 374 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 433
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQDR
Sbjct: 434 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDR 493
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 494 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 553
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 554 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 613
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 614 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 673
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 674 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 733
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 734 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 793
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 794 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 833
BLAST of ClCG04G009240 vs. NCBI nr
Match:
XP_016902885.1 (PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis melo])
HSP 1 Score: 927.9 bits (2397), Expect = 4.1e-266
Identity = 480/531 (90.40%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 312 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 371
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 372 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 431
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQDR
Sbjct: 432 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDR 491
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 492 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 551
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 552 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 611
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 612 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 671
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 672 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 731
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 732 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 791
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 792 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 831
BLAST of ClCG04G009240 vs. NCBI nr
Match:
KAA0063818.1 (RNA polymerase sigma factor sigF [Cucumis melo var. makuwa])
HSP 1 Score: 926.4 bits (2393), Expect = 1.2e-265
Identity = 479/531 (90.21%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 314 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 373
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 374 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 433
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQ+R
Sbjct: 434 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQER 493
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 494 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 553
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 554 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 613
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 614 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 673
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 674 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 733
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 734 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 793
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 794 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 833
BLAST of ClCG04G009240 vs. ExPASy Swiss-Prot
Match:
Q9LD95 (RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIGF PE=1 SV=1)
HSP 1 Score: 527.7 bits (1358), Expect = 1.6e-148
Identity = 313/579 (54.06%), Postives = 397/579 (68.57%), Query Frame = 0
Query: 1 MEAGLNLLSSSSPFISRCHPRSFLPPSCSSSSSSSSSSVSMFHEQATP-----------A 60
MEA NL+SSS F ++ H + SS SS SSV M H+Q T +
Sbjct: 1 MEATRNLVSSSPSFQTKTHLK---------SSYSSPSSVVMLHDQTTTPVVNSRHLNSLS 60
Query: 61 RYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSDLDHLVWELK 120
R+F S LSQE E RP S L+DDRTSQ+TL+RR + V SSR D + +L
Sbjct: 61 RHFPASVLSQEPREESRPLSHALRDDRTSQLTLERRQFDELV----SSRED-EKFEQQLL 120
Query: 121 HQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQA 180
H W L+S S E K+ +V L E +V+ALA+KALSASKQA
Sbjct: 121 HSTGLWNLLISPLTS----ETKLPAVVSP--------LADAELCDVVALAQKALSASKQA 180
Query: 181 ALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRSKKRKKPKHV 240
AL VD++E N D L+ S SL ++G V+S R +RR+K R+ PK
Sbjct: 181 ALLVDDTE---ANPSDNIKDSLS----TSSSMSLPEKGNIVRSKRQLERRAKNRRAPKSN 240
Query: 241 TTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILE 300
E + +++K + D +D L+LFLWGPETK+LLTA+EE+ LI IQ L+ LE
Sbjct: 241 DVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELISHIQHLLKLE 300
Query: 301 NVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQ 360
VK +L+SQ G EPT+ EWAEA+G++ L+S +H R SREKLI ANLR+VVHIAKQYQ
Sbjct: 301 KVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLVVHIAKQYQ 360
Query: 361 GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPEN 420
RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPEN
Sbjct: 361 NRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPEN 420
Query: 421 VYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQ 480
VY LLGKV+EA+ V+ GNY+PSKEELA G++ E+LDKLL+ +R P S+QQ +W+DQ
Sbjct: 421 VYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQ 480
Query: 481 DTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLE 540
DTTFQEIT DS ++TP +SV ++LMR H+RNLLN+LSPKERRII+LRFGI+ GK+++L E
Sbjct: 481 DTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSE 540
Query: 541 IGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADIL 569
IG ++GLSKERVRQLE+RALY+LK+ NS GL AYAD+L
Sbjct: 541 IGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYADLL 546
BLAST of ClCG04G009240 vs. ExPASy Swiss-Prot
Match:
O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)
HSP 1 Score: 250.8 bits (639), Expect = 3.8e-65
Identity = 136/356 (38.20%), Postives = 214/356 (60.11%), Query Frame = 0
Query: 210 VKSTRLQDRRSKKRK-KPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKK 269
V+STR +R++++ K K + I +R ++ D NDPLR + K
Sbjct: 212 VRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK 271
Query: 270 LLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRI 329
LLT +EE L IQDL+ LE ++ L + GR+PT +WA A G+ + L+ ++H +
Sbjct: 272 LLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTL 331
Query: 330 SREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWW 389
++K+I +N+R+V+ IAK YQG G++L DL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 332 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWW 391
Query: 390 IRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERL 449
I+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL
Sbjct: 392 IKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRL 451
Query: 450 DKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPK 509
+L + PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L+ L +
Sbjct: 452 MAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTR 511
Query: 510 ERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY 565
E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK + L Y
Sbjct: 512 EKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQY 567
BLAST of ClCG04G009240 vs. ExPASy Swiss-Prot
Match:
P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 5.1e-62
Identity = 127/322 (39.44%), Postives = 208/322 (64.60%), Query Frame = 0
Query: 234 ETSNSRGKDSRRKT--SENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENV 293
+ + + SRR+T + D +RL+L +LL A EE L +I DL+ LE V
Sbjct: 57 DAKSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERV 116
Query: 294 KARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGR 353
+ RL + R+P EWAEA+ L + +LH R +++K++ +NLR+VV IAK+Y R
Sbjct: 117 RERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNR 176
Query: 354 GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVY 413
GLS DL+QEGSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y
Sbjct: 177 GLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLY 236
Query: 414 GLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDT 473
+ ++ + + KP++EE+A R +T+E+L + +++P SL+ + ++D+
Sbjct: 237 ETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDS 296
Query: 474 TFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIG 533
+ +S+ +TP+ V + L+R + +L+ LSP+ER ++RLR+G++DG+ KTL EIG
Sbjct: 297 RLGDF-IESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIG 356
Query: 534 NMFGLSKERVRQLENRALYKLK 554
+F +++ER+RQ+E +AL KL+
Sbjct: 357 QIFNVTRERIRQIEAKALRKLR 377
BLAST of ClCG04G009240 vs. ExPASy Swiss-Prot
Match:
P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)
HSP 1 Score: 229.6 bits (584), Expect = 9.1e-59
Identity = 135/362 (37.29%), Postives = 215/362 (59.39%), Query Frame = 0
Query: 210 VKSTRLQDRRSKKRKKPKHV----TTIHETSNSRGKDSRRKTSENFD------------- 269
+K + +RS ++K V TTI T++ D E+ D
Sbjct: 27 LKPAETKAKRSSRKKATTAVVEPATTIAPTADVDAIDDEDSVGEDEDAAAKAKAKVRKTY 86
Query: 270 PNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEAL 329
D +RL+L +LL A EE L QI DL+ LE ++ L Q R P+ EWA A+
Sbjct: 87 TEDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAV 146
Query: 330 GLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEK 389
+ +L R +++K++ +NLR+VV IAK+Y RGLS DL+QEGSLGL+++ EK
Sbjct: 147 DSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEK 206
Query: 390 FKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKP 449
F + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y + ++ + + KP
Sbjct: 207 FDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKP 266
Query: 450 SKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQE-ITADSEVDTPDVSVER 509
++EE+A R +T+E+L + +++P SL+ + ++D+ + I AD E TP+ V +
Sbjct: 267 TEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGE--TPEDEVAK 326
Query: 510 ELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK 554
L+R + +L+ LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER+RQ+E +AL K
Sbjct: 327 NLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRK 386
BLAST of ClCG04G009240 vs. ExPASy Swiss-Prot
Match:
Q31ME3 (RNA polymerase sigma factor SigA2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA2 PE=1 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 1.6e-55
Identity = 126/319 (39.50%), Postives = 196/319 (61.44%), Query Frame = 0
Query: 247 TSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLV 306
+S + P D +R +L +LLTA+EE Q+Q LM+L + + L+ + G EP+
Sbjct: 4 SSAQYSP-DLVRAYLQEIGRVRLLTAEEELCFGRQVQRLMMLLDAQTELRDRLGHEPSKE 63
Query: 307 EWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGL 366
EWA A+ L + L Q+ + ++ K+I ANLR+VV IAK+YQ R + DL+QEG+LGL
Sbjct: 64 EWAAAVDLNLEDLDRQIEQGQRAKRKMIEANLRLVVSIAKKYQKRHMEFLDLIQEGTLGL 123
Query: 367 MKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVR 426
+ VEKF P G +F+TYAYWWIRQ+I +AI + SRTIRLP ++ L K+ + + +
Sbjct: 124 ERGVEKFDPSKGYKFSTYAYWWIRQAITRAIAQQSRTIRLPIHITEKLNKLKKTQRELSQ 183
Query: 427 AGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVDTPD 486
+ ELA + +E++ + + M+R P SL V QDT QE+ D E +P
Sbjct: 184 QLGRSATASELAEVLELPLEQVREYIQMNRQPVSLDVKVGDSQDTELQELLED-EQSSPS 243
Query: 487 VSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLEN 546
VE+E +RR +RNL+ L+P+++ +I LR+G+++G +L ++G +S+ERVR+LE
Sbjct: 244 DYVEQESLRRDLRNLMAELTPQQQAVIALRYGLDEGDSLSLAKVGERLNISRERVRKLER 303
Query: 547 RALYKLKRCCNSQGLGAYA 566
+A+ L+R S+ L YA
Sbjct: 304 QAMDHLRR--RSRLLAEYA 318
BLAST of ClCG04G009240 vs. ExPASy TrEMBL
Match:
A0A0A0KEQ6 (RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G446410 PE=3 SV=1)
HSP 1 Score: 969.9 bits (2506), Expect = 4.5e-279
Identity = 507/573 (88.48%), Postives = 529/573 (92.32%), Query Frame = 0
Query: 1 MEAGLNLLSSSSPFISRCHPRSFLPPSCSS----SSSSSSSSVSMFHEQATPARYFSTSF 60
MEAGLNLLSSSSPFISRCHPRSFL PSCSS SSSSSSSSV MF EQA+PARYFSTSF
Sbjct: 1 MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSF 60
Query: 61 LSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSDLDHLVWELKHQAVEWP 120
LSQEQHHECRPQS+ILKDDR+SQMTL+RRLIERSV IDE SR D DHL+WELKHQAVEWP
Sbjct: 61 LSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWP 120
Query: 121 GLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQAALFVDES 180
GLLSSWP +QMEEYKISS+EK+SYNA GEMLVKDEPENVIALAKKALSASKQAAL VDE+
Sbjct: 121 GLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDET 180
Query: 181 ELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRSKKRKKPKHVTTIHETS 240
ELVGT+LDY+S DD SLSKEGRTV+STRLQDRRSKKRK PKHVTTI E S
Sbjct: 181 ELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEIS 240
Query: 241 NSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQ 300
N RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES LIVQIQDLMIL+NVKARLQ
Sbjct: 241 NFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQ 300
Query: 301 SQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLH 360
SQF REPTLVEWAEALG+TCQ LQSQLH F+ SREKLINANLRMVVHIAKQYQGRGLSLH
Sbjct: 301 SQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLH 360
Query: 361 DLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK 420
DLLQ GSLGLMKSVEKFKPQAGCRF +YAYWWIR SI KAIF+HSRTIRLPENVY LLGK
Sbjct: 361 DLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGK 420
Query: 421 VTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEI 480
VTEAKNYFVRAGNYKPSKEELAAR GITVER DKL+FMSRIPRSLQQ VWADQ+TTFQEI
Sbjct: 421 VTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEI 480
Query: 481 TADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGL 540
TADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGL
Sbjct: 481 TADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGL 540
Query: 541 SKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
SKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 541 SKERVRQLENRALYKLKRCCNSQGLGAYADLLT 562
BLAST of ClCG04G009240 vs. ExPASy TrEMBL
Match:
A0A1S4E3S8 (RNA polymerase sigma factor sigF, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500810 PE=3 SV=1)
HSP 1 Score: 927.9 bits (2397), Expect = 2.0e-266
Identity = 480/531 (90.40%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 314 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 373
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 374 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 433
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQDR
Sbjct: 434 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDR 493
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 494 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 553
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 554 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 613
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 614 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 673
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 674 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 733
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 734 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 793
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 794 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 833
BLAST of ClCG04G009240 vs. ExPASy TrEMBL
Match:
A0A1S4E4I4 (RNA polymerase sigma factor sigF, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500810 PE=3 SV=1)
HSP 1 Score: 927.9 bits (2397), Expect = 2.0e-266
Identity = 480/531 (90.40%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 312 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 371
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 372 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 431
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQDR
Sbjct: 432 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQDR 491
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 492 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 551
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 552 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 611
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 612 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 671
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 672 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 731
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 732 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 791
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 792 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 831
BLAST of ClCG04G009240 vs. ExPASy TrEMBL
Match:
A0A5A7V893 (RNA polymerase sigma factor sigF OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00350 PE=3 SV=1)
HSP 1 Score: 926.4 bits (2393), Expect = 5.8e-266
Identity = 479/531 (90.21%), Postives = 497/531 (93.60%), Query Frame = 0
Query: 39 VSMFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSR 98
V MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SR
Sbjct: 314 VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSR 373
Query: 99 SDLDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIAL 158
SD DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIAL
Sbjct: 374 SDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIAL 433
Query: 159 AKKALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDR 218
AKKALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQ+R
Sbjct: 434 AKKALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQER 493
Query: 219 RSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESAL 278
RSKKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES L
Sbjct: 494 RSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDL 553
Query: 279 IVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANL 338
IVQIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANL
Sbjct: 554 IVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANL 613
Query: 339 RMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIF 398
RMVVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF
Sbjct: 614 RMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIF 673
Query: 399 EHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIP 458
+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIP
Sbjct: 674 QHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIP 733
Query: 459 RSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFG 518
RSLQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFG
Sbjct: 734 RSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFG 793
Query: 519 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 794 IEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 833
BLAST of ClCG04G009240 vs. ExPASy TrEMBL
Match:
A0A5D3CAF4 (RNA polymerase sigma factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00200 PE=3 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.5e-266
Identity = 478/529 (90.36%), Postives = 496/529 (93.76%), Query Frame = 0
Query: 41 MFHEQATPARYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSD 100
MF EQA+PARYFSTSFLSQEQHHECRPQS+ILKDDRTSQMTLDRRLIERSV IDE SRSD
Sbjct: 1 MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSD 60
Query: 101 LDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAK 160
DHL+WELKHQAVEWP LLSSWPSLQMEEYKISS EK+SYNA GEMLVKDEPENVIALAK
Sbjct: 61 HDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAK 120
Query: 161 KALSASKQAALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRS 220
KALSASKQAAL VDESELVGT+LDY+S DD SLSKEGRTV+STRLQ+RRS
Sbjct: 121 KALSASKQAALLVDESELVGTSLDYSSLDD-----------SLSKEGRTVRSTRLQERRS 180
Query: 221 KKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIV 280
KKRK PKHVTTIHETSN RGKDSRRKTSE FDPNDPLRLFLWGPETKKLLTAQEES LIV
Sbjct: 181 KKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIV 240
Query: 281 QIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRM 340
QIQDLMIL+NVKA+LQSQFGREPTLVEWAEALG+TCQ+LQSQLHSFR SREKLINANLRM
Sbjct: 241 QIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRM 300
Query: 341 VVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEH 400
VVHIAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+H
Sbjct: 301 VVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQH 360
Query: 401 SRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRS 460
SRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA GITVERLDKL+FMSRIPRS
Sbjct: 361 SRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRS 420
Query: 461 LQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIE 520
LQQ VWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLL+ILSPKERRIIRLRFGIE
Sbjct: 421 LQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIE 480
Query: 521 DGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADILT 570
DGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD+LT
Sbjct: 481 DGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT 518
BLAST of ClCG04G009240 vs. TAIR 10
Match:
AT2G36990.1 (RNApolymerase sigma-subunit F )
HSP 1 Score: 527.7 bits (1358), Expect = 1.1e-149
Identity = 313/579 (54.06%), Postives = 397/579 (68.57%), Query Frame = 0
Query: 1 MEAGLNLLSSSSPFISRCHPRSFLPPSCSSSSSSSSSSVSMFHEQATP-----------A 60
MEA NL+SSS F ++ H + SS SS SSV M H+Q T +
Sbjct: 1 MEATRNLVSSSPSFQTKTHLK---------SSYSSPSSVVMLHDQTTTPVVNSRHLNSLS 60
Query: 61 RYFSTSFLSQEQHHECRPQSEILKDDRTSQMTLDRRLIERSVSIDESSRSDLDHLVWELK 120
R+F S LSQE E RP S L+DDRTSQ+TL+RR + V SSR D + +L
Sbjct: 61 RHFPASVLSQEPREESRPLSHALRDDRTSQLTLERRQFDELV----SSRED-EKFEQQLL 120
Query: 121 HQAVEWPGLLSSWPSLQMEEYKISSVEKQSYNAGGEMLVKDEPENVIALAKKALSASKQA 180
H W L+S S E K+ +V L E +V+ALA+KALSASKQA
Sbjct: 121 HSTGLWNLLISPLTS----ETKLPAVVSP--------LADAELCDVVALAQKALSASKQA 180
Query: 181 ALFVDESELVGTNLDYTSPDDLAHIGIYSLISSLSKEGRTVKSTRLQDRRSKKRKKPKHV 240
AL VD++E N D L+ S SL ++G V+S R +RR+K R+ PK
Sbjct: 181 ALLVDDTE---ANPSDNIKDSLS----TSSSMSLPEKGNIVRSKRQLERRAKNRRAPKSN 240
Query: 241 TTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILE 300
E + +++K + D +D L+LFLWGPETK+LLTA+EE+ LI IQ L+ LE
Sbjct: 241 DVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELISHIQHLLKLE 300
Query: 301 NVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQ 360
VK +L+SQ G EPT+ EWAEA+G++ L+S +H R SREKLI ANLR+VVHIAKQYQ
Sbjct: 301 KVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLVVHIAKQYQ 360
Query: 361 GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPEN 420
RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPEN
Sbjct: 361 NRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPEN 420
Query: 421 VYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQ 480
VY LLGKV+EA+ V+ GNY+PSKEELA G++ E+LDKLL+ +R P S+QQ +W+DQ
Sbjct: 421 VYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQ 480
Query: 481 DTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLE 540
DTTFQEIT DS ++TP +SV ++LMR H+RNLLN+LSPKERRII+LRFGI+ GK+++L E
Sbjct: 481 DTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSE 540
Query: 541 IGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADIL 569
IG ++GLSKERVRQLE+RALY+LK+ NS GL AYAD+L
Sbjct: 541 IGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYADLL 546
BLAST of ClCG04G009240 vs. TAIR 10
Match:
AT1G08540.1 (RNApolymerase sigma subunit 2 )
HSP 1 Score: 250.8 bits (639), Expect = 2.7e-66
Identity = 136/356 (38.20%), Postives = 214/356 (60.11%), Query Frame = 0
Query: 210 VKSTRLQDRRSKKRK-KPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKK 269
V+STR +R++++ K K + I +R ++ D NDPLR + K
Sbjct: 212 VRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK 271
Query: 270 LLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRI 329
LLT +EE L IQDL+ LE ++ L + GR+PT +WA A G+ + L+ ++H +
Sbjct: 272 LLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTL 331
Query: 330 SREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWW 389
++K+I +N+R+V+ IAK YQG G++L DL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 332 CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWW 391
Query: 390 IRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERL 449
I+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL
Sbjct: 392 IKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRL 451
Query: 450 DKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLNILSPK 509
+L + PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L+ L +
Sbjct: 452 MAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTR 511
Query: 510 ERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY 565
E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK + L Y
Sbjct: 512 EKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQY 567
BLAST of ClCG04G009240 vs. TAIR 10
Match:
AT5G13730.1 (sigma factor 4 )
HSP 1 Score: 170.2 bits (430), Expect = 4.6e-42
Identity = 106/302 (35.10%), Postives = 156/302 (51.66%), Query Frame = 0
Query: 263 GPETKKLLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQ 322
G L+ EE L + +++ LEN+ ++ E V A G +
Sbjct: 116 GASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEE---NEMVSVLLASGRGKKKRSANEI 175
Query: 323 LHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA 382
L + +REK+ R+VV IA YQG+GL+L DL+QEGS+GL++ E+F P G + +
Sbjct: 176 LCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLS 235
Query: 383 TYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAG 442
TY YWWI+Q+I +AI SR ++LP +++ L KV EA N R +PS EE+A
Sbjct: 236 TYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLN 295
Query: 443 ITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLL 502
+ V + + SR P SL + + T QEI + P+ V+RE M+ I LL
Sbjct: 296 LNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLL 355
Query: 503 NILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLG 562
L+ +E R++ L FG+ + EIG LS+ERVRQ+ AL KL+ N L
Sbjct: 356 GSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLK 414
Query: 563 AY 565
Y
Sbjct: 416 IY 414
BLAST of ClCG04G009240 vs. TAIR 10
Match:
AT3G53920.1 (RNApolymerase sigma-subunit C )
HSP 1 Score: 153.7 bits (387), Expect = 4.5e-37
Identity = 101/373 (27.08%), Postives = 197/373 (52.82%), Query Frame = 0
Query: 198 SLISSLSKEGRTVKSTRLQ-----DRRSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFD 257
S+ S LS V +T Q RR K+K + T S R T N D
Sbjct: 198 SITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQSSLPIGLRTTWNNID 257
Query: 258 PNDPLRLFLWGPETKKLLTAQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEAL 317
R + + +++ ++ E+ + ++ + +E ++ +L+ + G+ +L WA A
Sbjct: 258 VPRVRRPPKYRKKRERI--SRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAA 317
Query: 318 GLTCQRLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEK 377
G+ + L LH R++L+ + +V+ +A+ Y+G G++ DL+Q G +G+++ E+
Sbjct: 318 GMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAER 377
Query: 378 FKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYK- 437
F G +F+TY +WIR+S+ + H+R + +P ++ + + +A+ + K
Sbjct: 378 FDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKY 437
Query: 438 PSKEELAARAGITVERLDKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVDTPDVSVER 497
+ EE+A G +V+++ ++ S+ + V T F E T D+ +++P+ +V R
Sbjct: 438 AADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMR 497
Query: 498 ELMRRHIRNLLNILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK 557
+ RR I +LL L P+E++++ LR+G++D + K+L EIG + +SKE +R++E RA+ K
Sbjct: 498 QSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAK 557
Query: 558 LKRCCNSQGLGAY 565
L+ N++ L Y
Sbjct: 558 LRDQPNAEDLRYY 568
BLAST of ClCG04G009240 vs. TAIR 10
Match:
AT1G64860.1 (sigma factor A )
HSP 1 Score: 132.1 bits (331), Expect = 1.4e-30
Identity = 100/358 (27.93%), Postives = 184/358 (51.40%), Query Frame = 0
Query: 212 STRLQDRRSKKRKKPKHVTTIHETSNSRGKDSRRKTSENFDPNDPLRLFLWGPETKKLLT 271
S R + +KK+ HV + + S+ + +R ++ G ++ +L+
Sbjct: 158 SARQRRIGAKKKTNMTHVKAVSDVSSGK----------------QVRGYVKGVISEDVLS 217
Query: 272 AQEESALIVQIQDLMILENVKARLQSQFGREPTLVEWAEALGLTCQRLQSQLHSFRISRE 331
E L +I+ + L++ K+RL+ + G EP+ + A +L ++ LQ+ L ++RE
Sbjct: 218 HVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLARE 277
Query: 332 KLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQ 391
KL +N+R+V+ IA++Y G + DL+Q G +GL++ +EKF G R +TY YWWIRQ
Sbjct: 278 KLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQ 337
Query: 392 SIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARAGITVERL--- 451
+ +A+ ++SRT+RLP +++ LG + AK G PS + +A ++ +++
Sbjct: 338 GVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKG-ITPSIDRIAESLNMSQKKVRNA 397
Query: 452 -DKLLFMSRIPRSLQQCVWADQDTTFQEITADSEVD-TPDVSVERELMRRHIRNLLN-IL 511
+ + + + R + T AD+ ++ P + ++ + L++ L
Sbjct: 398 TEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATL 457
Query: 512 SPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA 564
+E+ IIRL +G+ D + T +I GLS+ERVRQ+ AL KLK + + A
Sbjct: 458 GEREKEIIRLYYGL-DKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEA 497
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882876.1 | 2.0e-289 | 92.62 | RNA polymerase sigma factor sigF, chloroplastic [Benincasa hispida] | [more] |
XP_031742499.1 | 9.4e-279 | 88.48 | RNA polymerase sigma factor sigF, chloroplastic [Cucumis sativus] >KGN48180.1 hy... | [more] |
XP_016902883.1 | 4.1e-266 | 90.40 | PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis m... | [more] |
XP_016902885.1 | 4.1e-266 | 90.40 | PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis m... | [more] |
KAA0063818.1 | 1.2e-265 | 90.21 | RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Q9LD95 | 1.6e-148 | 54.06 | RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana OX=3702 ... | [more] |
O22056 | 3.8e-65 | 38.20 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV... | [more] |
P26683 | 5.1e-62 | 39.44 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT... | [more] |
P38023 | 9.1e-59 | 37.29 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ... | [more] |
Q31ME3 | 1.6e-55 | 39.50 | RNA polymerase sigma factor SigA2 OS=Synechococcus elongatus (strain PCC 7942 / ... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KEQ6 | 4.5e-279 | 88.48 | RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G446410 PE=3 SV=1 | [more] |
A0A1S4E3S8 | 2.0e-266 | 90.40 | RNA polymerase sigma factor sigF, chloroplastic isoform X1 OS=Cucumis melo OX=36... | [more] |
A0A1S4E4I4 | 2.0e-266 | 90.40 | RNA polymerase sigma factor sigF, chloroplastic isoform X2 OS=Cucumis melo OX=36... | [more] |
A0A5A7V893 | 5.8e-266 | 90.21 | RNA polymerase sigma factor sigF OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3CAF4 | 7.5e-266 | 90.36 | RNA polymerase sigma factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |