ClCG04G009180 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCTTAGTACTTATCTTATCAATGATGATATTGAGCTACGCTTGCATGGCGACTTCAAGAAGGATTGCTTTGGGAGGACTTCATGGACAAGGAAACCAATATCTCTTCAAGCAAGCACAAACAGCTGGAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGAATTAGCAACCATCACTCATTGCCTAGAGACTACTTCAACGACTCGCAAGGAAATGACAACAGTAATGGCAATGGTGGAAGTGGGTAA ATGAAGTTCTTAGTACTTATCTTATCAATGATGATATTGAGCTACGCTTGCATGGCGACTTCAAGAAGGATTGCTTTGGGAGGACTTCATGGACAAGGAAACCAATATCTCTTCAAGCAAGCACAAACAGCTGGAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGAATTAGCAACCATCACTCATTGCCTAGAGACTACTTCAACGACTCGCAAGGAAATGACAACAGTAATGGCAATGGTGGAAGTGGGTAA ATGAAGTTCTTAGTACTTATCTTATCAATGATGATATTGAGCTACGCTTGCATGGCGACTTCAAGAAGGATTGCTTTGGGAGGACTTCATGGACAAGGAAACCAATATCTCTTCAAGCAAGCACAAACAGCTGGAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGAATTAGCAACCATCACTCATTGCCTAGAGACTACTTCAACGACTCGCAAGGAAATGACAACAGTAATGGCAATGGTGGAAGTGGGTAA MKFLVLILSMMILSYACMATSRRIALGGLHGQGNQYLFKQAQTAGENNSRKSNFKHPESGISNHHSLPRDYFNDSQGNDNSNGNGGSG Homology
BLAST of ClCG04G009180 vs. NCBI nr
Match: KAE8647398.1 (hypothetical protein Csa_003831 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of ClCG04G009180 vs. NCBI nr
Match: KAA0047240.1 (hypothetical protein E6C27_scaffold908G00330 [Cucumis melo var. makuwa] >TYK05876.1 hypothetical protein E5676_scaffold432G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 147.5 bits (371), Expect = 5.4e-32 Identity = 78/88 (88.64%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of ClCG04G009180 vs. NCBI nr
Match: KAG6604413.1 (hypothetical protein SDJN03_05022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.7 bits (304), Expect = 3.1e-24 Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of ClCG04G009180 vs. NCBI nr
Match: POO01696.1 (hypothetical protein TorRG33x02_024730 [Trema orientale]) HSP 1 Score: 53.9 bits (128), Expect = 8.1e-04 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of ClCG04G009180 vs. ExPASy TrEMBL
Match: A0A0A0KK82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446330 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.8e-33 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of ClCG04G009180 vs. ExPASy TrEMBL
Match: A0A5A7TVP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00070 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32 Identity = 78/88 (88.64%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of ClCG04G009180 vs. ExPASy TrEMBL
Match: A0A7N2M795 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.0e-05 Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of ClCG04G009180 vs. ExPASy TrEMBL
Match: A0A2P5FV74 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_024730 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.9e-04 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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