ClCG04G007110 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G007110
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Clathrin light chain
Location	CG_Chr04: 22084104 .. 22086869 (+)
RNA-Seq Expression	ClCG04G007110
Synteny	ClCG04G007110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCTTCGCCGGAACGCCTCCTCCTCCGTTCGACGACGGCACCATCGGATTCGAACCTCGCCTCGCTTCTCAACGATTCGAATCATTTTCTACTTTCGAAGCCGAGTCCGGCGCCGACTCTGCCGACGACTCTTCACCGATCTTCCGAAACCGGGCGTTCAACCAGGGAGACGAACTTCCGCCGACTCGGCCTTCGAATGTCTCGGCGGATGGAGGATTCTCGAGTTTTTCGCCGCAGCAGAACGGGGAGGGTTTTGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGGTTAGAAAACTGTTGAAATTCTTTGCGATTGTAAGATTATTGACATAAGTTTTTGAAATCGAAATCTGTGAATTAAAGAGCAATCGGAATCTTCGAATTGGTTAGCTCTTACTGAGATTATTAAATCGTTGTGCTTATGAACTGAATTACAATTTTGCAATCATCTTATTGATGAACTATCGTAATTTTTGTGCATTCAAGAAATTTTATTCCTATTGTTACTTACTGCTTTTGTGTGAACTCAAAAGCTTACCTCCATTTGATGATCATTTCACGAGCAAATTCTTTAATTTTTGGCTTTAAAAAATTGTGCTATGTAGTTTTCGATCTTTACTAACCAAAAGAGTTGAATTCAAATTTCAAAAGCAAAAAATAAGTTAAATTTTTTTTTTTGTTAGTTTCTGAAAACATGAATAGAAAATAAATAACAAACTAAAACTTAGAAATCAAATGGTTACCAAACAGAGTCTTTGGTTTTTTGTTTTTGGTTTCTAAAAATCATACTGGTTTTCTTACAACTTTTTTTGCTATGGTTTTCATCTTTCCTAACTAAACACTTAAATTCTTAGCCAAATTTAAAAAACACAAACGAAATTTTAAAAACAACTTTTTTGAATTTTGAAATCAATATATTGAGTGTTGAATTACTATTCTTATGTTTAATTTTCAAAACCCAAAACCCAAATGTTTATCAAAGGAGCCTTATAAAACTGTTTGGATTAATTTTCTAAGTGTTTAAAAACACTTTTTTTTTTTTTTTACACTTAGAAGCAATGTTTTAAGCACTTTAGAAAGTCAATCCAAACAATAGGGGTTCGAATACAGCGGTTCGAACACAGGTCCTTCTACTCTGATATCAAGTTACCATTGAATCTAAAAGCTTAACTTGATAGATTACAGTAAATTTAATTATATCAATACTTTAACATGTATTTAAGCTGTGAATGACAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGCTGGAAGAGATAATTGATGAGGCTAATCAGTATAAAGTTGAATTCTATAGGAGGCGCAAGCTTGCTCTTGATAATATCAAAGCTTCTAATAGGGATAAGGAGAAGGTGAGAATGTCTAAACTCCTACAACTTCATTAAATTTCTCTCACTATATACTGAAAACTCCTCTTGATTTTCTTTAAACATGGAATGAAGAAAACCGGAATTAATTTGATTTTGTGGAATGTTGCATTGATTTGGCTTCTGAATCTACAATGGATGTTGAATTGAATGTTGAAATGAAGTATGCTATTTTCTTTAGATTGTGGATTTAGATTTTAGGCTAAATAGCGAAAGATACCCATTCTTTTAAAAGTTGCAATATTGTCTTTCTAACCTTTATAGATGTTCCAAAGTAGAAATCCTTTCGAATTTTTTATGGAAATTGAGAATTGAAACATATTTGTGTCGGTGACGTTGAACAATATAGCAATGTCTGGGTGACCAACACATCATTCTAGGTCTCGATTTGTTCAACATTCTAAAAGATTTCTACTCCAAGGTAGTAGTTTTTAAATTATAGTTTATGAAAGAATATGAATATTTTTTAAACAAAATACAATGTCTTGAGATATTTCTTTTGTAATCTAGCCGAGACAAGGGCACGCGATTGGATATTGATTTGATTGACGAGGCCTATCATTTGAATCTTTACATCAATTGGGAGAAATAATTAGATGTTTGAACTCAAAATTTACTATTTTGGTATCATATTTAAATCACTACTAGGTCCAAGAGCTTTAACTCAATGAGGATATTGATATTATATTGTGAGGTTTTACTATATAAAATGTATTTGTGTAGCCAATTGAGCCTAATATTTTGTTAGAATCTATCTTATTGGAAAATAAGTCGGCTGAATAAAGCAAAAGGTTCCCATTGGATTCTAACCTTTTCTTAGTTTTTCTTCTTCTAACAGCTCAATTACGATCACTTCTCTTTGTTTTGTGCATATTCCCCATTCATGCTTCATAAATCTTACCATATTTGAACTTAAAATGACAGCAATATCTAGCAAATCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTTCCAACCATTGAACAAAGAGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCAAAGCCCGGGAAACCGACCGATCTCTCGAGAATGCGCCAAATACATTTGAAACTCAAACACAATACTCCTCTTCACATGAAGCCTAAGCCACCACCACCAGGACCAAAAGAATCTAAATCCGAGCAGAAAAAGGATTCTTCTGCTGTTGGCGCGACTTCGGTTGCTGCAAGAACTGCTGCTGTTGCAAATTCTGAGGGTACAACTGCTGGTTGA

mRNA sequence

ATGTCAACCTTCGCCGGAACGCCTCCTCCTCCGTTCGACGACGGCACCATCGGATTCGAACCTCGCCTCGCTTCTCAACGATTCGAATCATTTTCTACTTTCGAAGCCGAGTCCGGCGCCGACTCTGCCGACGACTCTTCACCGATCTTCCGAAACCGGGCGTTCAACCAGGGAGACGAACTTCCGCCGACTCGGCCTTCGAATGTCTCGGCGGATGGAGGATTCTCGAGTTTTTCGCCGCAGCAGAACGGGGAGGGTTTTGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGCTGGAAGAGATAATTGATGAGGCTAATCAGTATAAAGTTGAATTCTATAGGAGGCGCAAGCTTGCTCTTGATAATATCAAAGCTTCTAATAGGGATAAGGAGAAGCAATATCTAGCAAATCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTTCCAACCATTGAACAAAGAGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCAAAGCCCGGGAAACCGACCGATCTCTCGAGAATGCGCCAAATACATTTGAAACTCAAACACAATACTCCTCTTCACATGAAGCCTAAGCCACCACCACCAGGACCAAAAGAATCTAAATCCGAGCAGAAAAAGGATTCTTCTGCTGTTGGCGCGACTTCGGTTGCTGCAAGAACTGCTGCTGTTGCAAATTCTGAGGGTACAACTGCTGGTTGA

Coding sequence (CDS)

ATGTCAACCTTCGCCGGAACGCCTCCTCCTCCGTTCGACGACGGCACCATCGGATTCGAACCTCGCCTCGCTTCTCAACGATTCGAATCATTTTCTACTTTCGAAGCCGAGTCCGGCGCCGACTCTGCCGACGACTCTTCACCGATCTTCCGAAACCGGGCGTTCAACCAGGGAGACGAACTTCCGCCGACTCGGCCTTCGAATGTCTCGGCGGATGGAGGATTCTCGAGTTTTTCGCCGCAGCAGAACGGGGAGGGTTTTGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGCTGGAAGAGATAATTGATGAGGCTAATCAGTATAAAGTTGAATTCTATAGGAGGCGCAAGCTTGCTCTTGATAATATCAAAGCTTCTAATAGGGATAAGGAGAAGCAATATCTAGCAAATCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTTCCAACCATTGAACAAAGAGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCAAAGCCCGGGAAACCGACCGATCTCTCGAGAATGCGCCAAATACATTTGAAACTCAAACACAATACTCCTCTTCACATGAAGCCTAAGCCACCACCACCAGGACCAAAAGAATCTAAATCCGAGCAGAAAAAGGATTCTTCTGCTGTTGGCGCGACTTCGGTTGCTGCAAGAACTGCTGCTGTTGCAAATTCTGAGGGTACAACTGCTGGTTGA

Protein sequence

MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDELPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPPGPKESKSEQKKDSSAVGATSVAARTAAVANSEGTTAG

Homology

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BLAST of ClCG04G007110 vs. NCBI nr
Match: XP_038882671.1 (clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light chain 2-like [Benincasa hispida])

HSP 1 Score: 489.6 bits (1259), Expect = 1.9e-134
Identity = 259/297 (87.21%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGTPPP FDDGTIGFEPRLASQRFE+FSTFE ES ADSA DSSPIF N A+NQGD+
Sbjct: 1   MSTFAGTPPPSFDDGTIGFEPRLASQRFETFSTFETESAADSAGDSSPIFGNMAYNQGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           L PT P+N SADGGFSSFSPQQNG+GFDGG+GESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LSPTPPTNFSADGGFSSFSPQQNGKGFDGGYGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEK KREKELLEEIIDEA+QYK+EFYRRRKLALDN K SNRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKLKREKELLEEIIDEADQYKIEFYRRRKLALDNTKTSNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQI LKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIQLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGATSVA------ARTAAVANSEGTTAG 292
           HNTPLHMKPK PPP P E KSE KKDSSA G TS A      +RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKQPPPPPVEPKSESKKDSSAAGMTSAAGSGLATSRTAAVATSEGTTFG 297

[Close]

BLAST of ClCG04G007110 vs. NCBI nr
Match: TYJ96292.1 (clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.7e-127
Identity = 250/297 (84.18%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGT PPPF+D TIGFEPRLASQRFE+FSTF+AE    SADDSSPIF N  ++ GD+
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           LPPT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEK+EKELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   KSE KKDSSA GAT        A+RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKPPPAEP---KSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of ClCG04G007110 vs. NCBI nr
Match: XP_008449287.1 (PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 465.3 bits (1196), Expect = 3.8e-127
Identity = 249/297 (83.84%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGT PPPF+D TIGF+PRLASQRFE+FSTF+AE    SADDSSPIF N  ++ GD+
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           LPPT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEK+EKELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   KSE KKDSSA GAT        A+RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKPPPAEP---KSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of ClCG04G007110 vs. NCBI nr
Match: XP_004147885.1 (clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_018069 [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 3.2e-126
Identity = 250/297 (84.18%), Postives = 262/297 (88.22%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGTPP PFDD T GFEPRLASQRFE+FSTFEAE    SADDSSPIF N  ++QGD 
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           + PT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  VEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEKRE ELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   K+E KKDSSA GAT      S A+RTAAVA SEG T G
Sbjct: 241 HNTPLHMKPKPPPAEP---KAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of ClCG04G007110 vs. NCBI nr
Match: XP_022151477.1 (clathrin light chain 2-like [Momordica charantia])

HSP 1 Score: 427.9 bits (1099), Expect = 6.8e-116
Identity = 229/297 (77.10%), Postives = 254/297 (85.52%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAG  PPPFDDGT G++PRL+SQRFESFS FEAES ADSA DSSPIF +R+ NQGD+
Sbjct: 1   MSTFAGA-PPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  L--------PPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFP 120
           L         P+ PSN S  GGFS+FSP+QNG+GFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEKREKELL+EIIDEA+QYK++FYRRRKLALDN KASNRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPPPGPKESKSEQKKDSSAVGATSVAARTAAVANSEGTT 290
           RQIHLKLK NTPLHM+PKPPP    ESK++ K+DSS+  A + A+ T    +S   T
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPP--SSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 294

[Close]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 120/205 (58.54%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 76  SSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELL 135
           S +    NG+G  G  G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKREKELL
Sbjct: 54  SDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 113

Query: 136 EEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIP 195
           ++II+EA+QYK EF+++ ++  +N KA+NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P
Sbjct: 114 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 173

Query: 196 NEVPTIE-QRGKKDKE--KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 255
            EVPTIE +RGKK+++  KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    
Sbjct: 174 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 233

Query: 256 PP-----GPKESKSEQKKDSSAVGA 273
           PP      P ++  E K   +   A
Sbjct: 234 PPSEEAAAPPKNVPETKPTEAVTAA 258

[Close]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot
Match: F4J5M9 (Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53
Identity = 130/249 (52.21%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 19  FEPRLASQRFE-SFSTFEAESGADSADDSSPIFRNRAFNQGDELPPTRPSNVSADGGFSS 78
           +E R  SQRF+ SFS F+++   +S                 +LP           G SS
Sbjct: 32  YESRFQSQRFDSSFSNFDSQPEKES-----------------DLP----------CGDSS 91

Query: 79  FSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLEE 138
             P+         F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK EKE++++
Sbjct: 92  PRPETQSPPSINSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQ 151

Query: 139 IIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNE 198
           I++ A QYK EFY +R + ++N K  NR+KEK +L NQEKF+AEADKN WKAIAELIP E
Sbjct: 152 ILEAAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPRE 211

Query: 199 VPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPPG-- 258
           VP IE RG  +K+K   I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P P   
Sbjct: 212 VPVIENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSPSGA 251

Query: 259 -PKESKSEQ 264
            P  S SEQ
Sbjct: 272 DPNVSVSEQ 251

[Close]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 131/262 (50.00%), Postives = 156/262 (59.54%), Query Frame = 0


Query: 29  ESFSTFEAESGADSADDSSPIFRNRAFNQGDELPPTRPSNVSADGGFSSFSPQQNGEGFD 88
           +SF  F+A + A +  D+ P             P   P     D       P+ NG   D
Sbjct: 20  DSFLRFDAAAPAPAPADAFP-------------PSPEPYAFRPDAPSPFGMPEANGSLHD 79

Query: 89  GGFGESD---GPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLEEIIDEANQY 148
             F   D   GP+L  P  M  +EGF LREWRR NAI LEEKEK+EKE+  +II +A ++
Sbjct: 80  DPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAILLEEKEKKEKEMRNQIILDAKEF 139

Query: 149 KVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRG 208
           K  F  +RKL ++  K  NR++EK YLANQEKFHA ADK YWKAI+ELIP+E+  IE+RG
Sbjct: 140 KKAFVEKRKLNVETSKDQNREREKLYLANQEKFHAGADKQYWKAISELIPHEIANIEKRG 199

Query: 209 ---KKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPPGPKESKSE 268
               KDKEKKP IVVIQGPKPGKPTD+SRMRQI LKLKH  P HMKP PPP         
Sbjct: 200 AKKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQILLKLKHTPPPHMKPPPPPAAATGKDGA 259

Query: 269 QKKDSSAVGATSVAARTAAVAN 285
             KD + V A   AA   A AN
Sbjct: 260 AGKDGAKVAA---AASKDASAN 265

[Close]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-50
Identity = 133/267 (49.81%), Postives = 152/267 (56.93%), Query Frame = 0


Query: 12  FDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDELPP------TR 71
           FDDG    +    S+  E F  ++  S A             +FN GD   P        
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFN-GDPASPNGYGFGAS 63

Query: 72  PSNVSADGGFSSFSPQQNGEGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRRLN 131
             N      F S     NG G  GG G      SDGPIL  P  M  EEGF  REWRRLN
Sbjct: 64  SPNHDFSSPFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLN 123

Query: 132 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 191
            I LEEKEK+EKE+  +II EA  +K  FY +R   ++  K  NR+KEK Y ANQEKFH 
Sbjct: 124 TIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHK 183

Query: 192 EADKNYWKAIAELIPNEVPTIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKL 251
           E DK+YWKAIAELIP EVP IE +RGKKD +KKP++ VIQGPKPGKPTDL RMRQI LKL
Sbjct: 184 EVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKL 243

Query: 252 KHNTPLHMKPKPPPPGPKESKSEQKKD 267
           K N P HM P PPPP       +  KD
Sbjct: 244 KTNPPPHMMP-PPPPAKDAKDGKDAKD 264

[Close]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.8e-50
Identity = 114/200 (57.00%), Postives = 137/200 (68.50%), Query Frame = 0


Query: 73  GGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREK 132
           GGFS  SP       DGG    DGPIL  P  M  EEG  LREWRR NAI LEEKE++EK
Sbjct: 77  GGFSP-SPFSPDPELDGG----DGPILPPPAQMGAEEGILLREWRRQNAIVLEEKERKEK 136

Query: 133 ELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAE 192
           EL  +I+ EA ++K  FY +R    +  K  NR++EK ++A QEKFHAEADK YWK+I+E
Sbjct: 137 ELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKFHAEADKQYWKSISE 196

Query: 193 LIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 252
           LIP+E+ TIE+RGKKDK+KKP+I VIQGPKPGKPTDLSRMRQI +KLKH  P HM   PP
Sbjct: 197 LIPHEIATIEKRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKHAPPPHMMQPPP 256

Query: 253 PPGPKESKSEQKKDSSAVGA 273
               K+   +  KD +   A
Sbjct: 257 ASAAKDGAKDGAKDGTPAPA 271

[Close]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL
Match: A0A5D3B8W6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00900 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.3e-128
Identity = 250/297 (84.18%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGT PPPF+D TIGFEPRLASQRFE+FSTF+AE    SADDSSPIF N  ++ GD+
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           LPPT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEK+EKELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   KSE KKDSSA GAT        A+RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKPPPAEP---KSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL
Match: A0A5A7TPG9 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00190 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127
Identity = 249/297 (83.84%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGT PPPF+D TIGF+PRLASQRFE+FSTF+AE    SADDSSPIF N  ++ GD+
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           LPPT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEK+EKELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   KSE KKDSSA GAT        A+RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKPPPAEP---KSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL
Match: A0A1S3BLP9 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127
Identity = 249/297 (83.84%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGT PPPF+D TIGF+PRLASQRFE+FSTF+AE    SADDSSPIF N  ++ GD+
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           LPPT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEK+EKELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   KSE KKDSSA GAT        A+RTAAVA SEGTT G
Sbjct: 241 HNTPLHMKPKPPPAEP---KSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL
Match: A0A0A0KZX1 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 250/297 (84.18%), Postives = 262/297 (88.22%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAGTPP PFDD T GFEPRLASQRFE+FSTFEAE    SADDSSPIF N  ++QGD 
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60

Query: 61  LPPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           + PT P+N SA GGFSSFS QQNG+GFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  VEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 180
           AIRLEEKEKRE ELLEEIIDEA+QYK+EFYRRRKLALD+ KA+NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240

Query: 241 HNTPLHMKPKPPPPGPKESKSEQKKDSSAVGAT------SVAARTAAVANSEGTTAG 292
           HNTPLHMKPKPPP  P   K+E KKDSSA GAT      S A+RTAAVA SEG T G
Sbjct: 241 HNTPLHMKPKPPPAEP---KAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL
Match: A0A6J1DDM4 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.3e-116
Identity = 229/297 (77.10%), Postives = 254/297 (85.52%), Query Frame = 0


Query: 1   MSTFAGTPPPPFDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDE 60
           MSTFAG  PPPFDDGT G++PRL+SQRFESFS FEAES ADSA DSSPIF +R+ NQGD+
Sbjct: 1   MSTFAGA-PPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  L--------PPTRPSNVSADGGFSSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFP 120
           L         P+ PSN S  GGFS+FSP+QNG+GFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEKREKELL+EIIDEA+QYK++FYRRRKLALDN KASNRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPPPGPKESKSEQKKDSSAVGATSVAARTAAVANSEGTT 290
           RQIHLKLK NTPLHM+PKPPP    ESK++ K+DSS+  A + A+ T    +S   T
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPP--SSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 294

[Close]

BLAST of ClCG04G007110 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 218.0 bits (554), Expect = 9.9e-57
Identity = 120/205 (58.54%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 76  SSFSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELL 135
           S +    NG+G  G  G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKREKELL
Sbjct: 54  SDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 113

Query: 136 EEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIP 195
           ++II+EA+QYK EF+++ ++  +N KA+NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P
Sbjct: 114 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 173

Query: 196 NEVPTIE-QRGKKDKE--KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 255
            EVPTIE +RGKK+++  KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    
Sbjct: 174 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 233

Query: 256 PP-----GPKESKSEQKKDSSAVGA 273
           PP      P ++  E K   +   A
Sbjct: 234 PPSEEAAAPPKNVPETKPTEAVTAA 258

[Close]

BLAST of ClCG04G007110 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 211.8 bits (538), Expect = 7.1e-55
Identity = 130/249 (52.21%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 19  FEPRLASQRFE-SFSTFEAESGADSADDSSPIFRNRAFNQGDELPPTRPSNVSADGGFSS 78
           +E R  SQRF+ SFS F+++   +S                 +LP           G SS
Sbjct: 32  YESRFQSQRFDSSFSNFDSQPEKES-----------------DLP----------CGDSS 91

Query: 79  FSPQQNGEGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLEE 138
             P+         F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK EKE++++
Sbjct: 92  PRPETQSPPSINSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQ 151

Query: 139 IIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNE 198
           I++ A QYK EFY +R + ++N K  NR+KEK +L NQEKF+AEADKN WKAIAELIP E
Sbjct: 152 ILEAAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPRE 211

Query: 199 VPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPPG-- 258
           VP IE RG  +K+K   I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P P   
Sbjct: 212 VPVIENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSPSGA 251

Query: 259 -PKESKSEQ 264
            P  S SEQ
Sbjct: 272 DPNVSVSEQ 251

[Close]

BLAST of ClCG04G007110 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-51
Identity = 133/267 (49.81%), Postives = 152/267 (56.93%), Query Frame = 0


Query: 12  FDDGTIGFEPRLASQRFESFSTFEAESGADSADDSSPIFRNRAFNQGDELPP------TR 71
           FDDG    +    S+  E F  ++  S A             +FN GD   P        
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFN-GDPASPNGYGFGAS 63

Query: 72  PSNVSADGGFSSFSPQQNGEGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRRLN 131
             N      F S     NG G  GG G      SDGPIL  P  M  EEGF  REWRRLN
Sbjct: 64  SPNHDFSSPFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLN 123

Query: 132 AIRLEEKEKREKELLEEIIDEANQYKVEFYRRRKLALDNIKASNRDKEKQYLANQEKFHA 191
            I LEEKEK+EKE+  +II EA  +K  FY +R   ++  K  NR+KEK Y ANQEKFH 
Sbjct: 124 TIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHK 183

Query: 192 EADKNYWKAIAELIPNEVPTIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKL 251
           E DK+YWKAIAELIP EVP IE +RGKKD +KKP++ VIQGPKPGKPTDL RMRQI LKL
Sbjct: 184 EVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKL 243

Query: 252 KHNTPLHMKPKPPPPGPKESKSEQKKD 267
           K N P HM P PPPP       +  KD
Sbjct: 244 KTNPPPHMMP-PPPPAKDAKDGKDAKD 264

The following BLAST results are available for this feature:

BLAST of ClCG04G007110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882671.1	1.9e-134	87.21	clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light c...	[more]
TYJ96292.1	1.7e-127	84.18	clathrin light chain 2-like [Cucumis melo var. makuwa]	[more]
XP_008449287.1	3.8e-127	83.84	PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin lig...	[more]
XP_004147885.1	3.2e-126	84.18	clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_01...	[more]
XP_022151477.1	6.8e-116	77.10	clathrin light chain 2-like [Momordica charantia]	[more]

BLAST of ClCG04G007110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04209	1.4e-55	58.54	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
F4J5M9	1.0e-53	52.21	Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1	[more]
Q5Z402	1.4e-50	50.00	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q9SKU1	5.2e-50	49.81	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q7XKE9	8.8e-50	57.00	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]

BLAST of ClCG04G007110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B8W6	8.3e-128	84.18	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold782...	[more]
A0A5A7TPG9	1.9e-127	83.84	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G...	[more]
A0A1S3BLP9	1.9e-127	83.84	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1	[more]
A0A0A0KZX1	1.6e-126	84.18	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1	[more]
A0A6J1DDM4	3.3e-116	77.10	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1	[more]

BLAST of ClCG04G007110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40060.1	9.9e-57	58.54	Clathrin light chain protein	[more]
AT3G51890.1	7.1e-55	52.21	Clathrin light chain protein	[more]
AT2G20760.1	3.7e-51	49.81	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..84
None	No IPR available	PANTHER	PTHR10639:SF24	CLATHRIN LIGHT CHAIN 3	coord: 11..282
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 100..211 e-value: 2.3E-10 score: 40.9
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 11..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G007110.2	ClCG04G007110.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0032050	clathrin heavy chain binding
molecular_function	GO:0005198	structural molecule activity