ClCG04G005215 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCGTATGAATGATAAAAATGTAATTTAATGTGGTCTAAGTGCAAGCATATATTGTCAATGAGTAATAACTTGAACATATTCAATGTAACGATTAAGATTTGATTGATTTGGGGTAACGAGTAAAAACACTAAACAATGGTTGATAAACAGGGATTACAATCTAGTTTTAACCAAAAGGGACTTATATCTTAGGCTATGCGACTTCATCATGTCAATAGTGACTTAACAAAAACTTCTCATATTCAATCTTGTGCATCAATGGATCTACGTAGGGGCTAGGGGACATGCCCCCTTCAAATTGTTGGTTTTTGAATTTTTAATATAAGTTTTTAGTAGTATTTAATAATATATATAAATAAGGTCAATATGTTTATCAAAAAGGTTTGCCAGAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGGTTTGAATATTATGTTTTACAACTTGAAACATATTTTGTATATTAAGTTCAGAGTTAAAACTTCAAGATAATTTTTTCATCTATCGTCAGAATATACGTTCTATACTGTTCACAAGTAAGTCTTAAAATTTTATTTATTTATTTATTTATTTATAGTTTGCATACTTTTAAATCTATGTTATAATTCCTATTACTTTTATTATTAATACTTATGTAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGGTTTTTTGAAAAAAAAGCAACATCTTGAGACTTTTTAAAATATGATGTCTGACCAAGCACGAGTTGAGTACGAATTCGATTAGGTGCATCAATTGATTGTACTCGATTTTTATTATAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAGTATTGCTAGTTTGAGAGGCTAAGGATATGATGAAGCAAATAATATGTAAGGTGAATTTAATGGCTTGAAAGCACTTATTCTGAAAGAAAATGAATGTGTTTTTTACATTCATTATTTTTCACATCACCTTCAATTAGCTCTCATAGCTATTGAAAAAAATCATGTTGAAATTGCTGGTCTTTTTTTAATTGTTACAAATGTGGTGAATGTTATTGGAGCATCAGCAAAACATCGAGATATTCTACGAGAGAAACATAGCATGAAAATTTTTGAAGCTTTAAATAATGGTGAAATATCAAGTGGTCGAAGATTAAATCAAAAGACAATGATTCAAACAACCGGAAGATACTCGATGAGGATCACATCACAATACTCTAACGAATTTTATTACAATGTTCTCTTTAGTAGTTGATGTACTTGAGACAATTGTGCAAGGTGGATCTGTTGGATTTGTACTTGTAATTGATTAGTTAATTATTTTTATTATTAATTATGCACTATTAATTTATCCATTAACGAAAAAATCCAAGGTTATTGCATGAAGTCTTGAACATGTATGTAGTTGATATACAGGTGGATCATGTACAAGAAATTACTTAAAGGTCTATAGTATATGGATAAGGTTGTGTGTCTTATCTTGGTGACACTATAGACACAACCCACTTTGTAATAGTTATAAATGGTTTGATCCAAACTGTTCATGTGGAGACATGTAAGTGGGGGTATTCTATACAAAGAGTTCGTATAAGACTAGATCGTGAAATATTTAATCTCTCTTTGTAAATCCGTTAATTAATGAGATTAATATTTCATAGGATGATCATGTGCGACTTGATCTTAATCCTAAGTGACTTATGAACTCATATTCATGATATCGATCCTTTGATTTGCATGGGTGAGAGTGACCTGAGTTGTTGACCCAATAAGCTTACCATTTTGGGGATTTGACTAAATGGGGAGCTGGGAACATAACTTCACAAGATAGAATTCACTCCTTCCCAGATAGGGTAAGTAGATGAGTAGTTCCCTTAAGTGCTGATTTCGGGTCTTGAACATGGGGCGCCACCCTCTCACTGGCTCGAAGGGATTTAGTTTATGGTTGGGCCATGAACAAATTATTCATTAGAGAGATCAGTGGTACTTAAGAAAAAATAGGTAATTACAGGGGTAAAACAGACATTTGACCAAGCTGTAATTATGAACAACTTGTGAAGGATTGACTTGCCTAAATTGATTATATCCATGGACACGACTTGTCCTACAGTGCATAAGAGTTCAATTATGAGTCTATAGTGGTTTGCCTTGTAGTTAATGAATGAAGATTAATTTAATTAAAGAGTTTAATTAATTAATCTTGGAGCATTGGAGTTTATAATTTGTAGGTCCATAAAGTCCCCTTGTTAGCTCACCACGGACCAATCAAATATGTTGAAAGAAAAATTTGAAATGTTCAAATTTATGAGAAAAAATATTAATTGCATTGGATACAATAAATTACATGATTTATTATAAAGTTTATTTGAATAAGATTTCAATTATAATTTTGTAATATGGATAATTAATTTATTTGAATATAATTAAAATAATCAATTATTTATTTGGATGAAGTCCATATAAATAAATAGAGGATTAATTAATTAATTAATTTGAATTCGATTCAAATAATTAATTATTTAATTTGGATGAGATACAAATTAAAGATTCTGTAGAAAATAAATATTTAAATAAGGTTTAAATAATTTAAACCACTTAATATGAGATATTATTTGGATAGATATTTATTAATATTGAATATTATTAAATATTTAATTTAAAATATCTGTAAAAGGGTTATTCTAGTAGGATTAGAAGAAGAGTTTTATAAATAGGGCCCTTGGGAGCCCTCATGGAATACACTCTCTATAAGAATAATCTCTTCGACTACTCTAAATTTTTCCAATTTTCTTAGAATGGTTCTAAGAAAATTCAAGAAGCGGTTCTCACAAACCGGATCTTTTGGAAAAGGAAGACTACACGGAGAAGACTATCAGTTGGAAAAGAATGACTATAAGGAGAAGACTATTAGTTAAAGGAGAAGATTTTGCTGAAATTATAGATCAACAAAGATATGTTGCTCAACCTTTTCTTAACTTTTTGTATTTTTAATTCTTTCAAAAAAGCAAAGAACGCGATCACATGCTTCCGCCGGAATTAAATTCCCTTCAGGATCAACTCCAACACAAAAATATGAAGCGAAGATTCTAATAAATTCGATCTTGTCATTTGACTTTGTTTTCAATATACATTTTATGAAAATTATCTTAGGAATCACAAATGAACTGTCTCAAGCATTACAAAGAAAAGACCAAGATATTGTGAATGCAATAAATTTAGTAAGATTTTGTAAAGAAAGATTGCAATTAATAAGAGAGTCTGGTTAGGATTCATTATTGCAAGTGGTTTTTTATTTTTGCAATAGTCATGCTATTTAAGTTCTTAAAATGGATGACATGTTTCTGATTCGAGGACGATAAAGTCGAAGATCTCAACCAATTACAAATTTGCATCATTATCGTGTTGGAATTTTTTATGTTGTCATTGATCTACAACTTCAAGAGTTGAATAATCGTTTTACTGTAACAAGTACTAAATTGCTCCTCTGTGTGGCATGTTTGAATTCGACTAATTCATTTATTCCTTTTGATAGACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG ATGTGCAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG ATGTGCAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG MCSDDRGFTLGFARHPELTLYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTHNQAWGKCEQGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSLKQKLIWLGQFYPRDFTAIEISMLEDQLQNYIIDMHSEFVELKSIFDLAVKIIATNKDNVYPLVYRLLTLTLILLVATTIVERTFSAMKIVKARLCNRMRDQWMNDCLIAYIEKDLLDKLNDKVIIH Homology
BLAST of ClCG04G005215 vs. NCBI nr
Match: XP_021828840.1 (uncharacterized protein LOC110769211 isoform X5 [Prunus avium]) HSP 1 Score: 287.3 bits (734), Expect = 1.7e-73 Identity = 165/346 (47.69%), Postives = 217/346 (62.72%), Query Frame = 0
BLAST of ClCG04G005215 vs. NCBI nr
Match: XP_028054201.1 (uncharacterized protein LOC114258446 [Camellia sinensis]) HSP 1 Score: 283.5 bits (724), Expect = 2.4e-72 Identity = 177/389 (45.50%), Postives = 222/389 (57.07%), Query Frame = 0
BLAST of ClCG04G005215 vs. NCBI nr
Match: XP_021828838.1 (uncharacterized protein LOC110769211 isoform X3 [Prunus avium]) HSP 1 Score: 274.2 bits (700), Expect = 1.5e-69 Identity = 180/500 (36.00%), Postives = 236/500 (47.20%), Query Frame = 0
BLAST of ClCG04G005215 vs. NCBI nr
Match: XP_008245511.1 (PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume]) HSP 1 Score: 260.0 bits (663), Expect = 2.8e-65 Identity = 203/678 (29.94%), Postives = 246/678 (36.28%), Query Frame = 0
BLAST of ClCG04G005215 vs. NCBI nr
Match: XP_028079852.1 (zinc finger MYM-type protein 1-like [Camellia sinensis]) HSP 1 Score: 257.7 bits (657), Expect = 1.4e-64 Identity = 135/241 (56.02%), Postives = 169/241 (70.12%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy Swiss-Prot
Match: Q5SVZ6 (Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.3e-08 Identity = 61/230 (26.52%), Postives = 98/230 (42.61%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy TrEMBL
Match: A0A6P5TP52 (uncharacterized protein LOC110769211 isoform X5 OS=Prunus avium OX=42229 GN=LOC110769211 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 8.1e-74 Identity = 165/346 (47.69%), Postives = 217/346 (62.72%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy TrEMBL
Match: A0A6P5TMI4 (uncharacterized protein LOC110769211 isoform X3 OS=Prunus avium OX=42229 GN=LOC110769211 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 7.1e-70 Identity = 180/500 (36.00%), Postives = 236/500 (47.20%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy TrEMBL
Match: A0A2N9J031 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62 Identity = 195/599 (32.55%), Postives = 242/599 (40.40%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy TrEMBL
Match: A0A5B7AXL6 (Putative zinc finger MYM-type protein 1-like (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030810 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 9.2e-62 Identity = 195/685 (28.47%), Postives = 251/685 (36.64%), Query Frame = 0
BLAST of ClCG04G005215 vs. ExPASy TrEMBL
Match: A0A2N9HSH6 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44919 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 2.7e-61 Identity = 177/485 (36.49%), Postives = 228/485 (47.01%), Query Frame = 0
BLAST of ClCG04G005215 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 196.1 bits (497), Expect = 4.7e-50 Identity = 108/243 (44.44%), Postives = 154/243 (63.37%), Query Frame = 0
BLAST of ClCG04G005215 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 179.9 bits (455), Expect = 3.5e-45 Identity = 107/279 (38.35%), Postives = 152/279 (54.48%), Query Frame = 0
HSP 2 Score: 97.1 bits (240), Expect = 3.0e-20 Identity = 55/127 (43.31%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of ClCG04G005215 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 171.8 bits (434), Expect = 9.5e-43 Identity = 143/542 (26.38%), Postives = 210/542 (38.75%), Query Frame = 0
BLAST of ClCG04G005215 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39 Identity = 143/570 (25.09%), Postives = 210/570 (36.84%), Query Frame = 0
BLAST of ClCG04G005215 vs. TAIR 10
Match: AT3G29763.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-27 Identity = 62/129 (48.06%), Postives = 90/129 (69.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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