ClCG04G004650 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG04G004650
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein kinase domain-containing protein
LocationCG_Chr04: 17754207 .. 17754983 (+)
RNA-Seq ExpressionClCG04G004650
SyntenyClCG04G004650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGGTATTCTCAAATGTGCAAAAAGTTTTCTTGGCCTAAACCAATCGAGATTTTTTCGTACATTCACTATCTAATCACTATCATCTTCTTTCGCATTCTCAAATTGTTGTCAAATCTACGTTCTTGGAAAATTCCTCTTTGCTTCTATTCGAGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGGTATTGTATATGGAATTGCCTTTTATTCATAGTTGATTCATTGTGATATTAAGCCATAAAACATACTCTTGACAATGCCAAAGTATGGATCATGGAGGTTGTTTGATGGAAAAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA

mRNA sequence

ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA

Coding sequence (CDS)

ATGACTGGCGCCAATTCCTCAAGGCCAAAAGGGAAGAAGGTACTTGACGATTTAAAGTTTTGCCCTAATGTAGTTCAATGTTATGGAGAGGAAATCACAGAAGGTGAATCTGGTGAATGTGTGCATATAATTTGCTTTTGGGGTACTATTCTGGATACTTATAAGATCGTATTACCAAGTTTGGACTTAATGGCTTGTCGCAATCAAAAGTTCACCAATATACAAGAGATTGGTGATTTTGGATTGGTTATGGAGATGACTGATGAAGGGACCACTGATGAAGAAGATGGTATTAGAGGGACGAAGTCGTACCTAGCACCAGAATCAACAGTGATAGATAATTATCTCGATTGGCCTATTGACCATATGAACACTTGGATATGCAGTGTTGGAGATGTAACAAGAAAAAGGAGCATGGGTTCCAAACCTCTTGATCCTAATTTGCTCACCCATATTGGTTATAGTAACGAATTGCTAGAAATTCCAAACGACTATATCATCAACAACAATTGA

Protein sequence

MTGANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICFWGTILDTYKIVLPSLDLMACRNQKFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIGYSNELLEIPNDYIINNN
Homology
BLAST of ClCG04G004650 vs. NCBI nr
Match: XP_038882353.1 (mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida])

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-15
Identity = 58/122 (47.54%), Postives = 70/122 (57.38%), Query Frame = 0

Query: 45  CFWGTILDTYKIVLPSLDLMACRNQKFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSY 104
           CF G + D      P   L      ++T    I DFGL M+MTD  T  EEDGI GT+SY
Sbjct: 138 CFGGNLYDRITKFGPK-GLPKSEVHRYTR-DIIADFGLAMKMTDVRTIGEEDGIGGTRSY 197

Query: 105 LAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIGYSNELLEIPND 164
           LAPE  V +NY DW ID        +  +T KR  GSK  D +LLT+I YSNELLEIPN+
Sbjct: 198 LAPE-LVTNNYPDWSIDIWALGCVVLEMLTGKRVWGSKTCDLDLLTYICYSNELLEIPNE 256

Query: 165 YI 167
            +
Sbjct: 258 LL 256

BLAST of ClCG04G004650 vs. NCBI nr
Match: PIN00056.1 (MEKK [Handroanthus impetiginosus])

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08
Identity = 61/207 (29.47%), Postives = 86/207 (41.55%), Query Frame = 0

Query: 4   ANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV-- 63
           A+ S  K ++VL +L+ CPNV++C+GEE T G +G  V+ +       GT+ D  K    
Sbjct: 65  ASGSIQKEREVLSNLRGCPNVIKCFGEETTMGVNGAMVYNLLLEYGSGGTLADRIKKFGN 124

Query: 64  --LPSLDLMACRNQ------------------KFTNI-------------QEIGDFGLVM 123
             LP +++                        K  NI              +IGDFGL  
Sbjct: 125 NGLPEVEVKVFAKSILRGLNHIHEIGYVHCDLKPDNILLMPDPKRVNKFRAKIGDFGLTK 184

Query: 124 EMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPL 165
                     E   RGT  YL+PE+ V+DN  D P D     I + G +  +   G  P 
Sbjct: 185 RAKQSKKRKLEPYWRGTPMYLSPEA-VMDNLQDPPCD-----IWAFGCIVLEMLTGKPPW 244

BLAST of ClCG04G004650 vs. NCBI nr
Match: CAA2935189.1 (mitogen-activated kinase kinase kinase YODA-like [Olea europaea subsp. europaea])

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-07
Identity = 56/208 (26.92%), Postives = 90/208 (43.27%), Query Frame = 0

Query: 5   NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----- 64
           + S  K K+VL ++K CPN+++C+GEE T GE+G   + +       GT+ D  K     
Sbjct: 59  SGSIQKEKEVLSNVKGCPNIIRCFGEEATMGENGVMAYNLLLEYGSGGTLADRIKKLGGK 118

Query: 65  ------------IVLPSL----------------DLMACRNQKFTNIQE----IGDFGLV 124
                        +L  L                +++  R+ + T + E    IGDFGL 
Sbjct: 119 GLSEFEVRVYARSILQGLNHIHGIGYVHCDLKPDNILLVRSGRRTRVPEFRAKIGDFGLA 178

Query: 125 MEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
                      E   RGT  YLAPE+ V+DN  ++P D     I + G +  +   G  P
Sbjct: 179 KRAQGNKKRKLEPYWRGTPRYLAPEA-VVDNVQEFPSD-----IWAFGCIVLEMLTGKPP 238

BLAST of ClCG04G004650 vs. NCBI nr
Match: KAE7999756.1 (hypothetical protein FH972_004157 [Carpinus fangiana])

HSP 1 Score: 64.7 bits (156), Expect = 8.8e-07
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 0

Query: 5   NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
           ++S  K K+VLD++K CP V+ C+GEEIT  ++GE V+ +       GT+ D+ +     
Sbjct: 39  SASLQKEKEVLDNVKGCPYVIGCFGEEITTQDNGEMVYNLLLEYASGGTLADSIEKSDGC 98

Query: 65  VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
            LP  D                               L+   N     + +IGDFGL   
Sbjct: 99  GLPEYDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTINSSGNFVAKIGDFGLAKR 158

Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
              + +   D +  +RGT  YLAPE TVI+      +   ++ I ++G V  K   G  P
Sbjct: 159 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIER-----VQEPSSDIWALGCVVCKMLTGKSP 218

BLAST of ClCG04G004650 vs. NCBI nr
Match: XP_020591201.1 (mitogen-activated protein kinase kinase kinase YODA-like [Phalaenopsis equestris])

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-06
Identity = 52/162 (32.10%), Postives = 73/162 (45.06%), Query Frame = 0

Query: 14  VLDDLKFCPNVVQCYGEEITEGESGECVHIICFWGTILDTYKIVLPSLDLMACRNQ---- 73
           VL DLK CP +++C+G +IT   SGE ++       +   Y +       +  RNQ    
Sbjct: 49  VLKDLKGCPQIIRCFGHDITTDISGELMY------NLFLEYAVGGCIFGALPYRNQPSAA 108

Query: 74  KFTNIQEIGDFGLVMEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWI-- 133
            F     I DFGL     DE T   +  I+GT  Y+APES   + Y       ++ W   
Sbjct: 109 MFVPSSWIADFGLATRTGDEST---KGYIKGTPLYVAPESASRNEY----NTAVDIWALG 168

Query: 134 CSVGDVTRKRSMGSKPLDPN-----LLTHIGYSNELLEIPND 165
           CSV ++   R       D +     LL  IG S+EL EIP +
Sbjct: 169 CSVSEMASGRLPWRDVEDSDYGIWPLLFRIGCSDELPEIPQE 197

BLAST of ClCG04G004650 vs. ExPASy TrEMBL
Match: A0A2G9G411 (MEKK OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27444 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 61/207 (29.47%), Postives = 86/207 (41.55%), Query Frame = 0

Query: 4   ANSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV-- 63
           A+ S  K ++VL +L+ CPNV++C+GEE T G +G  V+ +       GT+ D  K    
Sbjct: 65  ASGSIQKEREVLSNLRGCPNVIKCFGEETTMGVNGAMVYNLLLEYGSGGTLADRIKKFGN 124

Query: 64  --LPSLDLMACRNQ------------------KFTNI-------------QEIGDFGLVM 123
             LP +++                        K  NI              +IGDFGL  
Sbjct: 125 NGLPEVEVKVFAKSILRGLNHIHEIGYVHCDLKPDNILLMPDPKRVNKFRAKIGDFGLTK 184

Query: 124 EMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPL 165
                     E   RGT  YL+PE+ V+DN  D P D     I + G +  +   G  P 
Sbjct: 185 RAKQSKKRKLEPYWRGTPMYLSPEA-VMDNLQDPPCD-----IWAFGCIVLEMLTGKPPW 244

BLAST of ClCG04G004650 vs. ExPASy TrEMBL
Match: A0A5N6QKE5 (Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004157 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 0

Query: 5   NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
           ++S  K K+VLD++K CP V+ C+GEEIT  ++GE V+ +       GT+ D+ +     
Sbjct: 39  SASLQKEKEVLDNVKGCPYVIGCFGEEITTQDNGEMVYNLLLEYASGGTLADSIEKSDGC 98

Query: 65  VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
            LP  D                               L+   N     + +IGDFGL   
Sbjct: 99  GLPEYDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTINSSGNFVAKIGDFGLAKR 158

Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 165
              + +   D +  +RGT  YLAPE TVI+      +   ++ I ++G V  K   G  P
Sbjct: 159 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIER-----VQEPSSDIWALGCVVCKMLTGKSP 218

BLAST of ClCG04G004650 vs. ExPASy TrEMBL
Match: A0A1Q3D664 (Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31366 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 54/191 (28.27%), Postives = 80/191 (41.88%), Query Frame = 0

Query: 12  KKVLDDLKFCPNVVQCYGEEITEGESGECVH---------------------------II 71
           K+VL  LK  P VV+CYG+E+TE   G+ ++                           I 
Sbjct: 78  KQVLSTLKNSPFVVKCYGDEVTESGDGKVIYNILLEYCSGCSLSDHIKESKTGLPESEIK 137

Query: 72  CFWGTILDTYKIV----------LPSLDLMACRNQKFTN-IQEIGDFGLVMEMTDEGTTD 131
           C+   IL   + V           PS  L+A  +   +  + +I DFGL     +E    
Sbjct: 138 CYTRDILRGLQFVHGHWLVHCDIKPSNILLASNSSSRSGLVAKISDFGLCKYENEEAVE- 197

Query: 132 EEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKPLDPNLLTHIG 165
                RGT+ Y+APE  + DN L+ P D        +  ++ K   G   +D +LL  I 
Sbjct: 198 ----TRGTRRYMAPE-VIEDNILERPADIWAVGCVVLEMMSGKVVWGVSTVDDDLLMRIA 257

BLAST of ClCG04G004650 vs. ExPASy TrEMBL
Match: A0A6I9SZL4 (mitogen-activated protein kinase kinase kinase 2-like OS=Sesamum indicum OX=4182 GN=LOC105158295 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 58/207 (28.02%), Postives = 86/207 (41.55%), Query Frame = 0

Query: 5   NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTY------ 64
           + S  K ++VL +LK C N+++C+GEE T G++G  V+ +       GT+ D        
Sbjct: 66  SGSIQKEREVLSNLKGCCNIIRCFGEETTVGDNGVMVYNLLLEYGSGGTLADRIKKSGGD 125

Query: 65  -----------KIVLPSLDLM--------------------ACRNQKFTNIQEIGDFGLV 124
                      K +L  L+ +                    A R        +IGDFGL 
Sbjct: 126 GLPEFEVRVYAKSILRGLNYIHGNGYVHCDLKPDNILLVRNAAREGSGEFRAKIGDFGLA 185

Query: 125 MEMTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 164
                      E   RGT  YL+PE+ VIDN  D P D     + ++G +  +   G  P
Sbjct: 186 KRAKQSKKRKLEAYWRGTPMYLSPEA-VIDNVQDAPCD-----VWALGCIVLEMLTGKPP 245

BLAST of ClCG04G004650 vs. ExPASy TrEMBL
Match: A0A5N6QIL4 (Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003483 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.5e-07
Identity = 61/207 (29.47%), Postives = 89/207 (43.00%), Query Frame = 0

Query: 5   NSSRPKGKKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYK----I 64
           ++S  K K+VLD+++ CP V+ C+GEEIT  E GE V+ +       GT+ D+ K     
Sbjct: 59  SASLQKEKEVLDNVRGCPYVIDCFGEEITIQEDGEMVYNLLLEYASGGTLGDSIKKSGGC 118

Query: 65  VLPSLD-------------------------------LMACRNQKFTNIQEIGDFGLVME 124
            LP  D                               L+   N     + +IGDFGL   
Sbjct: 119 GLPESDVKRYTKSILKGLRHIHDCGYVHCDLKPENVLLVPTTNSSGNFVAKIGDFGLAKR 178

Query: 125 --MTDEGTTDEEDGIRGTKSYLAPESTVIDNYLDWPIDHMNTWICSVGDVTRKRSMGSKP 164
              + +   D +  +RGT  YLAPE TVI+   + P D     I ++G V  +   G  P
Sbjct: 179 SAQSKKRRFDLDLYLRGTPLYLAPE-TVIERVQELPSD-----IWALGCVVCQMLTGKSP 238

BLAST of ClCG04G004650 vs. TAIR 10
Match: AT3G50310.1 (mitogen-activated protein kinase kinase kinase 20 )

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 55/190 (28.95%), Postives = 80/190 (42.11%), Query Frame = 0

Query: 12  KKVLDDLKFCPNVVQCYGEEITEGESGECVHIICF----WGTILDTYKIV----LPSLDL 71
           K VLD L  CP +++CYGE+ T  E+GE +H +       G++    K +    LP   +
Sbjct: 50  KSVLDSLGDCPEIIRCYGEDSTV-ENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTV 109

Query: 72  ------------------MACRNQKFTNI-------QEIGDFGLVMEMTDEGTTDEED-G 131
                              A  + K  NI        +I DFGL M +  + T   +   
Sbjct: 110 RRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVE 169

Query: 132 IRGTKSYLAPESTVIDNYLDWPIDHMNTWI--CSVGDVTRKRSMGSKPLDP---NLLTHI 163
           IRGT  Y+APE  V DN      D    W   C+V ++   ++  S        +LL  I
Sbjct: 170 IRGTPLYMAPE-CVNDNEYGSAAD---VWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRI 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882353.11.0e-1547.54mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida][more]
PIN00056.16.1e-0829.47MEKK [Handroanthus impetiginosus][more]
CAA2935189.16.8e-0726.92mitogen-activated kinase kinase kinase YODA-like [Olea europaea subsp. europaea][more]
KAE7999756.18.8e-0729.33hypothetical protein FH972_004157 [Carpinus fangiana][more]
XP_020591201.11.2e-0632.10mitogen-activated protein kinase kinase kinase YODA-like [Phalaenopsis equestris... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2G9G4113.0e-0829.47MEKK OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27444 PE=3 SV=1[more]
A0A5N6QKE54.3e-0729.33Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972... [more]
A0A1Q3D6647.3e-0728.27Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_... [more]
A0A6I9SZL47.3e-0728.02mitogen-activated protein kinase kinase kinase 2-like OS=Sesamum indicum OX=4182... [more]
A0A5N6QIL49.5e-0729.47Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972... [more]
Match NameE-valueIdentityDescription
AT3G50310.11.1e-0428.95mitogen-activated protein kinase kinase kinase 20 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G004650.1ClCG04G004650.1mRNA