ClCG04G004535 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG04G004535
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrotransposon protein
LocationCG_Chr04: 17527188 .. 17528153 (-)
RNA-Seq ExpressionClCG04G004535
SyntenyClCG04G004535
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGGTAAGATTCTAGAAACTATTTACCGGTACGTGTTAAATATGTAAATATTAATAATATGTACATGTATCAATGTAGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGGTCAATCCAGTTAGGACCCACACGTGATGGCGACGAATGCATTCAGAGAGTTTGAAGAGGAGTTTCGACTTGGATCGCAGGACTATCACACACCTGAGGTTCGCTAGACAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG

mRNA sequence

ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG

Coding sequence (CDS)

ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG

Protein sequence

MYACSIMAGNSRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDDFSTVFGKDRAVESPLNQDGMDEEPTKQSTGRATLAESSQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEHT
Homology
BLAST of ClCG04G004535 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-113
Identity = 214/263 (81.37%), Postives = 229/263 (87.07%), Query Frame = 0

Query: 7   MAGN-SRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSAL 66
           MAG+  R+KHVWSKVED KLVEALLYLVE GWRSDN TFR GYLQYLERILHEKV G AL
Sbjct: 1   MAGSGKRSKHVWSKVEDTKLVEALLYLVETGWRSDNGTFRLGYLQYLERILHEKVPGCAL 60

Query: 67  NQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNK 126
           NQN IECKVRSLKKQYN VSEML QS FGWNEEFKCVQVE+E+FDLWVRSHL+AKGMWNK
Sbjct: 61  NQNTIECKVRSLKKQYNAVSEMLSQSGFGWNEEFKCVQVEKEIFDLWVRSHLNAKGMWNK 120

Query: 127 PFPHYDDFSTVFGKDRA---------VESPLNQDGMDEEPTKQSTGRAT-LAESSQGSKR 186
            F HYDD STVFGKDRA          ESPLNQD +DEEP +QSTGRA+ LAESS+GSKR
Sbjct: 121 SFLHYDDLSTVFGKDRANCHTPEVCQAESPLNQDEIDEEPAEQSTGRASVLAESSRGSKR 180

Query: 187 KRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQ 246
           KRPSFQ EMIDIMRSTVEMQ+THMG+LASWQKEKYELEFGR+KEVVN IY+I+GLDE DQ
Sbjct: 181 KRPSFQAEMIDIMRSTVEMQSTHMGRLASWQKEKYELEFGRRKEVVNAIYSIDGLDEDDQ 240

Query: 247 VTLIDLLVTDIQKTNCFLTVSEH 259
           VT IDLLVTDIQKT+CFL V EH
Sbjct: 241 VTFIDLLVTDIQKTDCFLAVPEH 263

BLAST of ClCG04G004535 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])

HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 202/263 (76.81%), Postives = 222/263 (84.41%), Query Frame = 0

Query: 7   MAGNS-RTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSAL 66
           M GNS R+KHVWSKVEDA+LVEALLYLVE GWRSDN TFRPGYLQ+LE+ILHEKV G AL
Sbjct: 1   MTGNSKRSKHVWSKVEDARLVEALLYLVETGWRSDNGTFRPGYLQHLEQILHEKVPGCAL 60

Query: 67  NQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNK 126
           N+N IECKVRSLKKQYN VSEML QS F WNEEFKCVQVERE+FDLWVRSH +AKGMW K
Sbjct: 61  NKNTIECKVRSLKKQYNAVSEMLSQSGFNWNEEFKCVQVEREIFDLWVRSHPNAKGMWKK 120

Query: 127 PFPHYDDFSTVFGKDRA---------VESPLNQDGMDEEPTKQSTGRATL-AESSQGSKR 186
           PFPHYDD S VFGKDRA          ESPLNQD +DEEP +QSTGRA++  ESS+GSKR
Sbjct: 121 PFPHYDDLSAVFGKDRADCHTPEVRQTESPLNQDEIDEEPAEQSTGRASVPTESSRGSKR 180

Query: 187 KRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQ 246
           KR SFQ EMIDI++STVEMQ+THMG+LASWQ EKYELE    KEVVN IYNI+ L+E DQ
Sbjct: 181 KRSSFQVEMIDIVKSTVEMQSTHMGRLASWQNEKYELEL---KEVVNAIYNIDDLEENDQ 240

Query: 247 VTLIDLLVTDIQKTNCFLTVSEH 259
           VTLIDL+VTDIQKT+CFL V EH
Sbjct: 241 VTLIDLIVTDIQKTDCFLAVPEH 260

BLAST of ClCG04G004535 vs. NCBI nr
Match: XP_038877407.1 (uncharacterized protein LOC120069696 [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 6.1e-84
Identity = 169/239 (70.71%), Postives = 188/239 (78.66%), Query Frame = 0

Query: 23  AKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIECKVRSLKKQYN 82
           AKL+E LLYLV+IGWRS    F       L       +   ALNQN IECKVRSLKKQYN
Sbjct: 7   AKLMEDLLYLVKIGWRSIMGRFDQDTYNTLSEFC--MIKCPALNQNTIECKVRSLKKQYN 66

Query: 83  EVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDDFSTVFGKDRA 142
            +SEML QS F WNEEFKCVQVERE+F+LWVRSH +AKGMWNKPFPHYDD ST       
Sbjct: 67  AISEMLSQSGFDWNEEFKCVQVEREIFNLWVRSHPNAKGMWNKPFPHYDDLSTDCHTPEV 126

Query: 143 --VESPLNQDGMDEEPTKQSTGRATL-AESSQGSKRKRPSFQYEMIDIMRSTVEMQNTHM 202
             +ES LNQD +DEEPT+QSTGR ++  ESS+GSKRKR SFQ EMIDIMRSTVEM +THM
Sbjct: 127 CQIESLLNQDEIDEEPTEQSTGRTSIPVESSRGSKRKRSSFQVEMIDIMRSTVEMHSTHM 186

Query: 203 GKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
           G+LASWQK+KYELEFGRQKEVVN IYNI+GLDE  QVTLIDL+VTDIQKT+CFL V EH
Sbjct: 187 GRLASWQKKKYELEFGRQKEVVNAIYNIDGLDEDTQVTLIDLVVTDIQKTDCFLAVPEH 243

BLAST of ClCG04G004535 vs. NCBI nr
Match: XP_038895773.1 (uncharacterized protein LOC120083935 [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.8e-83
Identity = 168/247 (68.02%), Postives = 184/247 (74.49%), Query Frame = 0

Query: 12  RTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIE 71
           R+KHVWSKVEDAK VEALLYLV+ GWRSDN TFR  YLQ+LERI HEKV G ALNQN IE
Sbjct: 45  RSKHVWSKVEDAKFVEALLYLVDTGWRSDNGTFRLEYLQHLERIHHEKVLGCALNQNTIE 104

Query: 72  CKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYD 131
           CKVRSLKKQ N VSEML QS F WNEEFKCVQVERE+FD WVRSH +AKGMWNKPFPHYD
Sbjct: 105 CKVRSLKKQCNAVSEMLSQSGFDWNEEFKCVQVEREIFDPWVRSHPNAKGMWNKPFPHYD 164

Query: 132 DFSTVFGKDRAVESPLNQDGMDEEPTKQSTGRATLAESSQGSKRKRPSFQYEMIDIMRST 191
           D STVFGK +AV          E+P   +T                  F+ E+    +  
Sbjct: 165 DLSTVFGKYKAVGQ------SSEDPYVMTTNAFR-------------EFEDEIRLGSQDC 224

Query: 192 VEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNC 251
              ++THMG+LASWQKEKYELEFGR+KEVVN IYNI+GLDE DQVTLIDLLVTDIQKTNC
Sbjct: 225 HTPESTHMGRLASWQKEKYELEFGRRKEVVNAIYNIDGLDEDDQVTLIDLLVTDIQKTNC 272

Query: 252 FLTVSEH 259
           FL V EH
Sbjct: 285 FLAVPEH 272

BLAST of ClCG04G004535 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 5.2e-75
Identity = 151/209 (72.25%), Postives = 164/209 (78.47%), Query Frame = 0

Query: 6   IMAGN-SRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSA 65
           IMAGN  ++KHVWSKVEDAKLVEALLYLVE GWR DN TFRPGYLQ+LE+ILHEKV G A
Sbjct: 46  IMAGNGKKSKHVWSKVEDAKLVEALLYLVETGWRFDNGTFRPGYLQHLEQILHEKVPGCA 105

Query: 66  LNQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWN 125
           LN N IECKVRSLKKQYN VSEML QS  GWNEEFKCV VERE+FDLWV SH +AK MWN
Sbjct: 106 LNHNTIECKVRSLKKQYNAVSEMLSQSGLGWNEEFKCVHVEREIFDLWVWSHPNAKRMWN 165

Query: 126 KPFPHYDDFSTVFGKDRAV--------------------ESPLNQDGMDEEPTKQSTGRA 185
           KPFPHYDD ST+FGKDRAV                    ESPLNQD +DEEP +QSTGRA
Sbjct: 166 KPFPHYDDLSTIFGKDRAVGQSSENPYVMDCHTPEVRQTESPLNQDEIDEEPAEQSTGRA 225

Query: 186 TL-AESSQGSKRKRPSFQYEMIDIMRSTV 193
           ++ AESS+ +KR R SFQ EMIDIMRSTV
Sbjct: 226 SVPAESSRSNKRNRSSFQVEMIDIMRSTV 254

BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 113/289 (39.10%), Postives = 164/289 (56.75%), Query Frame = 0

Query: 7   MAGNSRT-KHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
           MA  SR  KH W+K E+ K VE L+ LV   GWRSDN TF+PGYL  L+R++ EK+ G+ 
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 67  LNQNN-IECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 126
           + +++ I+C V+SLKK Y+ ++EM G   S FGWNEEF+C+  ER++FD W++SH +AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 127 MWNKPFPHYDDFSTVFGKDRAVES--------------------PLNQDGMDEEPTKQST 186
           + +K FP+YDD S VFGKDRA  +                    PL     ++ PT  S 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 187 G-----------RATLAES----SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQ 246
           G           RA  A      S  SKRKR S +YE ++++RS +E  N  +  +A W 
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 247 KEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTV 256
           KEK  +E   + +VV  + +I  L   D+  L+ +L   ++    FL++
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSI 289

BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 113/289 (39.10%), Postives = 164/289 (56.75%), Query Frame = 0

Query: 7   MAGNSRT-KHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
           MA  SR  KH W+K E+ K VE L+ LV   GWRSDN TF+PGYL  L+R++ EK+ G+ 
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 67  LNQNN-IECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 126
           + +++ I+C V+SLKK Y+ ++EM G   S FGWNEEF+C+  ER++FD W++SH +AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 127 MWNKPFPHYDDFSTVFGKDRAVES--------------------PLNQDGMDEEPTKQST 186
           + +K FP+YDD S VFGKDRA  +                    PL     ++ PT  S 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 187 G-----------RATLAES----SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQ 246
           G           RA  A      S  SKRKR S +YE ++++RS +E  N  +  +A W 
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 247 KEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTV 256
           KEK  +E   + +VV  + +I  L   D+  L+ +L   ++    FL++
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSI 289

BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match: A0A5A7VFF1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G002210 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.3e-38
Identity = 100/268 (37.31%), Postives = 151/268 (56.34%), Query Frame = 0

Query: 7   MAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
           MA +SR  KH W+K E+A LVE L+ LV   GWRSDNETFRPGYL  L R++  K+ GS 
Sbjct: 1   MASSSRLPKHNWTKEEEAGLVECLMELVNAGGWRSDNETFRPGYLNQLARMMAFKIPGSN 60

Query: 67  LNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKGM 126
           ++ + I+ +++ LK+ ++ +  M G   S FGWN+E KC+  E+EV D WV+SH +AKG+
Sbjct: 61  VHASTIDSRIKLLKRMFHAIVGMRGPTCSGFGWNDEQKCIVAEKEVLDNWVKSHTAAKGL 120

Query: 127 WNKPFPHYDDFSTVFGKDRAV------------ESPLNQDGMDEEPTKQSTGRATLAESS 186
            NK F HYD+ S VFGKDRA              +P   +    + T  +  +      S
Sbjct: 121 LNKSFSHYDELSYVFGKDRATGGRAESFADVGSNNPAGYEPFVVDATPDTDFQPMYV--S 180

Query: 187 QGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGL 246
            GSKRKR     +  DI+R+ +E  N  + ++A W   + +     ++EVV  +  I  L
Sbjct: 181 SGSKRKRKGQAADSGDILRTAIEYGNEQLNRIAKWLVLQRQDASQTRQEVVRQLDAIPEL 240

Query: 247 DEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
             +D+  L+ +L+ ++     FL V ++
Sbjct: 241 TLMDRCRLMRILMHNVDDMKAFLEVPDN 266

BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.9e-37
Identity = 106/291 (36.43%), Postives = 158/291 (54.30%), Query Frame = 0

Query: 6   IMAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGS 65
           IM  +SR  KH W+K E+A LVE L+ LV   GWRSDN TFRPGYL  L R++  K+ GS
Sbjct: 355 IMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGS 414

Query: 66  ALNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 125
            ++ + I+ +++ +K+ ++ ++EM G   S FGWN+E KC+  E+EVFD W  SH +AKG
Sbjct: 415 NIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKG 474

Query: 126 MWNKPFPHYDDFSTVFGKDRA----VES--------------------------PLNQDG 185
           + NK F HYD+ S VFGKDRA     ES                          P+   G
Sbjct: 475 LLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPG 534

Query: 186 MDEEPTK-QSTGRATLAES---SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQK 245
           ++  P     T  A ++E    S GSKRKRP    +  DI+R+ +E  N  + ++A W  
Sbjct: 535 LNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPI 594

Query: 246 EKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
            + +     ++E+V  +  I  L  +D+  L+ +L+ ++     FL V +H
Sbjct: 595 LQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643

BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match: A0A5A7U9V6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004400 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36
Identity = 105/290 (36.21%), Postives = 158/290 (54.48%), Query Frame = 0

Query: 7   MAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
           M  +SR  KH W+K E+A LVE L+ LV   GWRSDN TFRPGYL  L R++  K+ GS 
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLMELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 67  LNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKGM 126
           ++ + I+ +++ +K+ ++ ++EM G   S FGWN+E KC+  E+EVFD W  SH +AKG+
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGL 120

Query: 127 WNKPFPHYDDFSTVFGKDRAV----ES--------------------------PLNQDGM 186
            NK F HYD+ S VFGKDRA+    ES                          P+   G+
Sbjct: 121 LNKEFVHYDELSYVFGKDRAIGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 180

Query: 187 DEEPTK-QSTGRATLAES---SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKE 246
           +  P     T  A ++E    S GSKRKRP    +  DI+R+ +E  N  + ++A W   
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTPIEYGNEQLHRIAEWPIL 240

Query: 247 KYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
           + +     ++E+V  +  I  L  +D+  L+ +L+ ++     FL V +H
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKSFLEVPDH 288

BLAST of ClCG04G004535 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 40/190 (21.05%), Postives = 81/190 (42.63%), Query Frame = 0

Query: 73  KVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDD 132
           + +SL++Q+N +  +L    F W+ E + V  +  V+  ++++H  A+    +P P+Y D
Sbjct: 240 RYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 299

Query: 133 FSTVFGKDRAVESP--LNQDGMDEEPTKQ---STGRATLAESSQGSKRKRPSFQYEMIDI 192
              + G     E+   +  D  D E   Q   S+G   L+ S++        F     D 
Sbjct: 300 LCVLCGDSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLF-----DP 359

Query: 193 MRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDL--LVTD 252
                ++ NT    +     +K  ++  +   + + +  I  L ++D   ++D   L+ D
Sbjct: 360 KNKRDQLANTDTSPI---NPKKPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLED 419

Query: 253 IQKTNCFLTV 256
             K   FL +
Sbjct: 420 KLKAKTFLAL 421

BLAST of ClCG04G004535 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 40/190 (21.05%), Postives = 81/190 (42.63%), Query Frame = 0

Query: 73  KVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDD 132
           + +SL++Q+N +  +L    F W+ E + V  +  V+  ++++H  A+    +P P+Y D
Sbjct: 240 RYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 299

Query: 133 FSTVFGKDRAVESP--LNQDGMDEEPTKQ---STGRATLAESSQGSKRKRPSFQYEMIDI 192
              + G     E+   +  D  D E   Q   S+G   L+ S++        F     D 
Sbjct: 300 LCVLCGDSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLF-----DP 359

Query: 193 MRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDL--LVTD 252
                ++ NT    +     +K  ++  +   + + +  I  L ++D   ++D   L+ D
Sbjct: 360 KNKRDQLANTDTSPI---NPKKPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLED 419

Query: 253 IQKTNCFLTV 256
             K   FL +
Sbjct: 420 KLKAKTFLAL 421

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896380.12.8e-11381.37uncharacterized protein LOC120084641 [Benincasa hispida][more]
XP_038887234.14.3e-10676.81uncharacterized protein LOC120077425 [Benincasa hispida][more]
XP_038877407.16.1e-8470.71uncharacterized protein LOC120069696 [Benincasa hispida][more]
XP_038895773.11.8e-8368.02uncharacterized protein LOC120083935 [Benincasa hispida][more]
XP_038892629.15.2e-7572.25uncharacterized protein At2g29880-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0H78.7e-4439.10Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L38.7e-4439.10uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5A7VFF19.3e-3837.31Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
E5GCB57.9e-3736.43Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A5A7U9V61.3e-3636.21Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
AT4G02210.11.3e-0421.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.21.3e-0421.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 17..108
e-value: 6.4E-10
score: 39.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..177
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 7..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G004535.1ClCG04G004535.1mRNA