Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGGTAAGATTCTAGAAACTATTTACCGGTACGTGTTAAATATGTAAATATTAATAATATGTACATGTATCAATGTAGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGGTCAATCCAGTTAGGACCCACACGTGATGGCGACGAATGCATTCAGAGAGTTTGAAGAGGAGTTTCGACTTGGATCGCAGGACTATCACACACCTGAGGTTCGCTAGACAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG
mRNA sequence
ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG
Coding sequence (CDS)
ATGTATGCATGCAGTATAATGGCAGGTAATAGTAGGACTAAACACGTATGGTCGAAGGTGGAGGACGCTAAGTTGGTGGAAGCCCTACTGTATTTGGTGGAGATCGGTTGGAGGTCTGACAATGAGACGTTTCGACCAGGATATCTACAGTACTTGGAGCGAATTCTGCATGAAAAGGTGTCTGGGAGCGCACTGAATCAGAACAACATCGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAATGAAGTATCAGAGATGTTAGGTCAGTCAGAGTTCGGCTGGAACGAGGAGTTCAAATGTGTCCAGGTAGAGAGGGAGGTTTTTGATCTTTGGGTTCGGAGTCATCTCAGTGCGAAGGGGATGTGGAACAAGCCATTCCCCCATTATGATGACTTCTCCACCGTATTTGGGAAAGATAGAGCAGTAGAATCACCATTAAATCAAGATGGAATGGATGAAGAGCCAACAAAGCAATCTACAGGTAGAGCGACACTTGCGGAGTCATCTCAAGGCAGCAAGAGGAAGAGACCATCATTCCAATATGAAATGATCGACATCATGAGATCGACTGTTGAAATGCAGAACACACACATGGGTAAACTTGCATCGTGGCAGAAGGAGAAGTATGAGCTGGAGTTCGGGCGTCAGAAGGAAGTAGTAAACGTCATATACAACATTAACGGCTTGGATGAGGTTGACCAGGTCACTCTTATTGACCTCCTTGTCACGGACATTCAGAAGACGAATTGCTTCCTTACAGTATCAGAACACACATAG
Protein sequence
MYACSIMAGNSRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDDFSTVFGKDRAVESPLNQDGMDEEPTKQSTGRATLAESSQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEHT
Homology
BLAST of ClCG04G004535 vs. NCBI nr
Match:
XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])
HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-113
Identity = 214/263 (81.37%), Postives = 229/263 (87.07%), Query Frame = 0
Query: 7 MAGN-SRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSAL 66
MAG+ R+KHVWSKVED KLVEALLYLVE GWRSDN TFR GYLQYLERILHEKV G AL
Sbjct: 1 MAGSGKRSKHVWSKVEDTKLVEALLYLVETGWRSDNGTFRLGYLQYLERILHEKVPGCAL 60
Query: 67 NQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNK 126
NQN IECKVRSLKKQYN VSEML QS FGWNEEFKCVQVE+E+FDLWVRSHL+AKGMWNK
Sbjct: 61 NQNTIECKVRSLKKQYNAVSEMLSQSGFGWNEEFKCVQVEKEIFDLWVRSHLNAKGMWNK 120
Query: 127 PFPHYDDFSTVFGKDRA---------VESPLNQDGMDEEPTKQSTGRAT-LAESSQGSKR 186
F HYDD STVFGKDRA ESPLNQD +DEEP +QSTGRA+ LAESS+GSKR
Sbjct: 121 SFLHYDDLSTVFGKDRANCHTPEVCQAESPLNQDEIDEEPAEQSTGRASVLAESSRGSKR 180
Query: 187 KRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQ 246
KRPSFQ EMIDIMRSTVEMQ+THMG+LASWQKEKYELEFGR+KEVVN IY+I+GLDE DQ
Sbjct: 181 KRPSFQAEMIDIMRSTVEMQSTHMGRLASWQKEKYELEFGRRKEVVNAIYSIDGLDEDDQ 240
Query: 247 VTLIDLLVTDIQKTNCFLTVSEH 259
VT IDLLVTDIQKT+CFL V EH
Sbjct: 241 VTFIDLLVTDIQKTDCFLAVPEH 263
BLAST of ClCG04G004535 vs. NCBI nr
Match:
XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])
HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 202/263 (76.81%), Postives = 222/263 (84.41%), Query Frame = 0
Query: 7 MAGNS-RTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSAL 66
M GNS R+KHVWSKVEDA+LVEALLYLVE GWRSDN TFRPGYLQ+LE+ILHEKV G AL
Sbjct: 1 MTGNSKRSKHVWSKVEDARLVEALLYLVETGWRSDNGTFRPGYLQHLEQILHEKVPGCAL 60
Query: 67 NQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNK 126
N+N IECKVRSLKKQYN VSEML QS F WNEEFKCVQVERE+FDLWVRSH +AKGMW K
Sbjct: 61 NKNTIECKVRSLKKQYNAVSEMLSQSGFNWNEEFKCVQVEREIFDLWVRSHPNAKGMWKK 120
Query: 127 PFPHYDDFSTVFGKDRA---------VESPLNQDGMDEEPTKQSTGRATL-AESSQGSKR 186
PFPHYDD S VFGKDRA ESPLNQD +DEEP +QSTGRA++ ESS+GSKR
Sbjct: 121 PFPHYDDLSAVFGKDRADCHTPEVRQTESPLNQDEIDEEPAEQSTGRASVPTESSRGSKR 180
Query: 187 KRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQ 246
KR SFQ EMIDI++STVEMQ+THMG+LASWQ EKYELE KEVVN IYNI+ L+E DQ
Sbjct: 181 KRSSFQVEMIDIVKSTVEMQSTHMGRLASWQNEKYELEL---KEVVNAIYNIDDLEENDQ 240
Query: 247 VTLIDLLVTDIQKTNCFLTVSEH 259
VTLIDL+VTDIQKT+CFL V EH
Sbjct: 241 VTLIDLIVTDIQKTDCFLAVPEH 260
BLAST of ClCG04G004535 vs. NCBI nr
Match:
XP_038877407.1 (uncharacterized protein LOC120069696 [Benincasa hispida])
HSP 1 Score: 321.6 bits (823), Expect = 6.1e-84
Identity = 169/239 (70.71%), Postives = 188/239 (78.66%), Query Frame = 0
Query: 23 AKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIECKVRSLKKQYN 82
AKL+E LLYLV+IGWRS F L + ALNQN IECKVRSLKKQYN
Sbjct: 7 AKLMEDLLYLVKIGWRSIMGRFDQDTYNTLSEFC--MIKCPALNQNTIECKVRSLKKQYN 66
Query: 83 EVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDDFSTVFGKDRA 142
+SEML QS F WNEEFKCVQVERE+F+LWVRSH +AKGMWNKPFPHYDD ST
Sbjct: 67 AISEMLSQSGFDWNEEFKCVQVEREIFNLWVRSHPNAKGMWNKPFPHYDDLSTDCHTPEV 126
Query: 143 --VESPLNQDGMDEEPTKQSTGRATL-AESSQGSKRKRPSFQYEMIDIMRSTVEMQNTHM 202
+ES LNQD +DEEPT+QSTGR ++ ESS+GSKRKR SFQ EMIDIMRSTVEM +THM
Sbjct: 127 CQIESLLNQDEIDEEPTEQSTGRTSIPVESSRGSKRKRSSFQVEMIDIMRSTVEMHSTHM 186
Query: 203 GKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
G+LASWQK+KYELEFGRQKEVVN IYNI+GLDE QVTLIDL+VTDIQKT+CFL V EH
Sbjct: 187 GRLASWQKKKYELEFGRQKEVVNAIYNIDGLDEDTQVTLIDLVVTDIQKTDCFLAVPEH 243
BLAST of ClCG04G004535 vs. NCBI nr
Match:
XP_038895773.1 (uncharacterized protein LOC120083935 [Benincasa hispida])
HSP 1 Score: 320.1 bits (819), Expect = 1.8e-83
Identity = 168/247 (68.02%), Postives = 184/247 (74.49%), Query Frame = 0
Query: 12 RTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSALNQNNIE 71
R+KHVWSKVEDAK VEALLYLV+ GWRSDN TFR YLQ+LERI HEKV G ALNQN IE
Sbjct: 45 RSKHVWSKVEDAKFVEALLYLVDTGWRSDNGTFRLEYLQHLERIHHEKVLGCALNQNTIE 104
Query: 72 CKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYD 131
CKVRSLKKQ N VSEML QS F WNEEFKCVQVERE+FD WVRSH +AKGMWNKPFPHYD
Sbjct: 105 CKVRSLKKQCNAVSEMLSQSGFDWNEEFKCVQVEREIFDPWVRSHPNAKGMWNKPFPHYD 164
Query: 132 DFSTVFGKDRAVESPLNQDGMDEEPTKQSTGRATLAESSQGSKRKRPSFQYEMIDIMRST 191
D STVFGK +AV E+P +T F+ E+ +
Sbjct: 165 DLSTVFGKYKAVGQ------SSEDPYVMTTNAFR-------------EFEDEIRLGSQDC 224
Query: 192 VEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNC 251
++THMG+LASWQKEKYELEFGR+KEVVN IYNI+GLDE DQVTLIDLLVTDIQKTNC
Sbjct: 225 HTPESTHMGRLASWQKEKYELEFGRRKEVVNAIYNIDGLDEDDQVTLIDLLVTDIQKTNC 272
Query: 252 FLTVSEH 259
FL V EH
Sbjct: 285 FLAVPEH 272
BLAST of ClCG04G004535 vs. NCBI nr
Match:
XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida])
HSP 1 Score: 292.0 bits (746), Expect = 5.2e-75
Identity = 151/209 (72.25%), Postives = 164/209 (78.47%), Query Frame = 0
Query: 6 IMAGN-SRTKHVWSKVEDAKLVEALLYLVEIGWRSDNETFRPGYLQYLERILHEKVSGSA 65
IMAGN ++KHVWSKVEDAKLVEALLYLVE GWR DN TFRPGYLQ+LE+ILHEKV G A
Sbjct: 46 IMAGNGKKSKHVWSKVEDAKLVEALLYLVETGWRFDNGTFRPGYLQHLEQILHEKVPGCA 105
Query: 66 LNQNNIECKVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWN 125
LN N IECKVRSLKKQYN VSEML QS GWNEEFKCV VERE+FDLWV SH +AK MWN
Sbjct: 106 LNHNTIECKVRSLKKQYNAVSEMLSQSGLGWNEEFKCVHVEREIFDLWVWSHPNAKRMWN 165
Query: 126 KPFPHYDDFSTVFGKDRAV--------------------ESPLNQDGMDEEPTKQSTGRA 185
KPFPHYDD ST+FGKDRAV ESPLNQD +DEEP +QSTGRA
Sbjct: 166 KPFPHYDDLSTIFGKDRAVGQSSENPYVMDCHTPEVRQTESPLNQDEIDEEPAEQSTGRA 225
Query: 186 TL-AESSQGSKRKRPSFQYEMIDIMRSTV 193
++ AESS+ +KR R SFQ EMIDIMRSTV
Sbjct: 226 SVPAESSRSNKRNRSSFQVEMIDIMRSTV 254
BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match:
A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 113/289 (39.10%), Postives = 164/289 (56.75%), Query Frame = 0
Query: 7 MAGNSRT-KHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
MA SR KH W+K E+ K VE L+ LV GWRSDN TF+PGYL L+R++ EK+ G+
Sbjct: 1 MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
Query: 67 LNQNN-IECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 126
+ +++ I+C V+SLKK Y+ ++EM G S FGWNEEF+C+ ER++FD W++SH +AKG
Sbjct: 61 IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
Query: 127 MWNKPFPHYDDFSTVFGKDRAVES--------------------PLNQDGMDEEPTKQST 186
+ +K FP+YDD S VFGKDRA + PL ++ PT S
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180
Query: 187 G-----------RATLAES----SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQ 246
G RA A S SKRKR S +YE ++++RS +E N + +A W
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240
Query: 247 KEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTV 256
KEK +E + +VV + +I L D+ L+ +L ++ FL++
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSI 289
BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match:
A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 113/289 (39.10%), Postives = 164/289 (56.75%), Query Frame = 0
Query: 7 MAGNSRT-KHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
MA SR KH W+K E+ K VE L+ LV GWRSDN TF+PGYL L+R++ EK+ G+
Sbjct: 1 MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
Query: 67 LNQNN-IECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 126
+ +++ I+C V+SLKK Y+ ++EM G S FGWNEEF+C+ ER++FD W++SH +AKG
Sbjct: 61 IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
Query: 127 MWNKPFPHYDDFSTVFGKDRAVES--------------------PLNQDGMDEEPTKQST 186
+ +K FP+YDD S VFGKDRA + PL ++ PT S
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180
Query: 187 G-----------RATLAES----SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQ 246
G RA A S SKRKR S +YE ++++RS +E N + +A W
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240
Query: 247 KEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTV 256
KEK +E + +VV + +I L D+ L+ +L ++ FL++
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSI 289
BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match:
A0A5A7VFF1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G002210 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 9.3e-38
Identity = 100/268 (37.31%), Postives = 151/268 (56.34%), Query Frame = 0
Query: 7 MAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
MA +SR KH W+K E+A LVE L+ LV GWRSDNETFRPGYL L R++ K+ GS
Sbjct: 1 MASSSRLPKHNWTKEEEAGLVECLMELVNAGGWRSDNETFRPGYLNQLARMMAFKIPGSN 60
Query: 67 LNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKGM 126
++ + I+ +++ LK+ ++ + M G S FGWN+E KC+ E+EV D WV+SH +AKG+
Sbjct: 61 VHASTIDSRIKLLKRMFHAIVGMRGPTCSGFGWNDEQKCIVAEKEVLDNWVKSHTAAKGL 120
Query: 127 WNKPFPHYDDFSTVFGKDRAV------------ESPLNQDGMDEEPTKQSTGRATLAESS 186
NK F HYD+ S VFGKDRA +P + + T + + S
Sbjct: 121 LNKSFSHYDELSYVFGKDRATGGRAESFADVGSNNPAGYEPFVVDATPDTDFQPMYV--S 180
Query: 187 QGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGL 246
GSKRKR + DI+R+ +E N + ++A W + + ++EVV + I L
Sbjct: 181 SGSKRKRKGQAADSGDILRTAIEYGNEQLNRIAKWLVLQRQDASQTRQEVVRQLDAIPEL 240
Query: 247 DEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
+D+ L+ +L+ ++ FL V ++
Sbjct: 241 TLMDRCRLMRILMHNVDDMKAFLEVPDN 266
BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match:
E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 7.9e-37
Identity = 106/291 (36.43%), Postives = 158/291 (54.30%), Query Frame = 0
Query: 6 IMAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGS 65
IM +SR KH W+K E+A LVE L+ LV GWRSDN TFRPGYL L R++ K+ GS
Sbjct: 355 IMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGS 414
Query: 66 ALNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKG 125
++ + I+ +++ +K+ ++ ++EM G S FGWN+E KC+ E+EVFD W SH +AKG
Sbjct: 415 NIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKG 474
Query: 126 MWNKPFPHYDDFSTVFGKDRA----VES--------------------------PLNQDG 185
+ NK F HYD+ S VFGKDRA ES P+ G
Sbjct: 475 LLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPG 534
Query: 186 MDEEPTK-QSTGRATLAES---SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQK 245
++ P T A ++E S GSKRKRP + DI+R+ +E N + ++A W
Sbjct: 535 LNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPI 594
Query: 246 EKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
+ + ++E+V + I L +D+ L+ +L+ ++ FL V +H
Sbjct: 595 LQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDH 643
BLAST of ClCG04G004535 vs. ExPASy TrEMBL
Match:
A0A5A7U9V6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004400 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36
Identity = 105/290 (36.21%), Postives = 158/290 (54.48%), Query Frame = 0
Query: 7 MAGNSR-TKHVWSKVEDAKLVEALLYLVEI-GWRSDNETFRPGYLQYLERILHEKVSGSA 66
M +SR KH W+K E+A LVE L+ LV GWRSDN TFRPGYL L R++ K+ GS
Sbjct: 1 MTSSSRLPKHTWTKEEEAGLVECLMELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60
Query: 67 LNQNNIECKVRSLKKQYNEVSEMLGQ--SEFGWNEEFKCVQVEREVFDLWVRSHLSAKGM 126
++ + I+ +++ +K+ ++ ++EM G S FGWN+E KC+ E+EVFD W SH +AKG+
Sbjct: 61 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGL 120
Query: 127 WNKPFPHYDDFSTVFGKDRAV----ES--------------------------PLNQDGM 186
NK F HYD+ S VFGKDRA+ ES P+ G+
Sbjct: 121 LNKEFVHYDELSYVFGKDRAIGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 180
Query: 187 DEEPTK-QSTGRATLAES---SQGSKRKRPSFQYEMIDIMRSTVEMQNTHMGKLASWQKE 246
+ P T A ++E S GSKRKRP + DI+R+ +E N + ++A W
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTPIEYGNEQLHRIAEWPIL 240
Query: 247 KYELEFGRQKEVVNVIYNINGLDEVDQVTLIDLLVTDIQKTNCFLTVSEH 259
+ + ++E+V + I L +D+ L+ +L+ ++ FL V +H
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKSFLEVPDH 288
BLAST of ClCG04G004535 vs. TAIR 10
Match:
AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )
HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 40/190 (21.05%), Postives = 81/190 (42.63%), Query Frame = 0
Query: 73 KVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDD 132
+ +SL++Q+N + +L F W+ E + V + V+ ++++H A+ +P P+Y D
Sbjct: 240 RYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 299
Query: 133 FSTVFGKDRAVESP--LNQDGMDEEPTKQ---STGRATLAESSQGSKRKRPSFQYEMIDI 192
+ G E+ + D D E Q S+G L+ S++ F D
Sbjct: 300 LCVLCGDSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLF-----DP 359
Query: 193 MRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDL--LVTD 252
++ NT + +K ++ + + + + I L ++D ++D L+ D
Sbjct: 360 KNKRDQLANTDTSPI---NPKKPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLED 419
Query: 253 IQKTNCFLTV 256
K FL +
Sbjct: 420 KLKAKTFLAL 421
BLAST of ClCG04G004535 vs. TAIR 10
Match:
AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )
HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 40/190 (21.05%), Postives = 81/190 (42.63%), Query Frame = 0
Query: 73 KVRSLKKQYNEVSEMLGQSEFGWNEEFKCVQVEREVFDLWVRSHLSAKGMWNKPFPHYDD 132
+ +SL++Q+N + +L F W+ E + V + V+ ++++H A+ +P P+Y D
Sbjct: 240 RYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 299
Query: 133 FSTVFGKDRAVESP--LNQDGMDEEPTKQ---STGRATLAESSQGSKRKRPSFQYEMIDI 192
+ G E+ + D D E Q S+G L+ S++ F D
Sbjct: 300 LCVLCGDSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLF-----DP 359
Query: 193 MRSTVEMQNTHMGKLASWQKEKYELEFGRQKEVVNVIYNINGLDEVDQVTLIDL--LVTD 252
++ NT + +K ++ + + + + I L ++D ++D L+ D
Sbjct: 360 KNKRDQLANTDTSPI---NPKKPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLED 419
Query: 253 IQKTNCFLTV 256
K FL +
Sbjct: 420 KLKAKTFLAL 421
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U0H7 | 8.7e-44 | 39.10 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B4L3 | 8.7e-44 | 39.10 | uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... | [more] |
A0A5A7VFF1 | 9.3e-38 | 37.31 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
E5GCB5 | 7.9e-37 | 36.43 | Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1 | [more] |
A0A5A7U9V6 | 1.3e-36 | 36.21 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT4G02210.1 | 1.3e-04 | 21.05 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G02210.2 | 1.3e-04 | 21.05 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |