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ClCG04G003990 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACGCTGGGAAGGCTGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATCACAAAACCGCCATTCCCGGGAAAGGTGGTGGTGAGCTCCGCCGTGATCAATGCTTCAGGGACACTCCATAAAAATGGGAAGACAATGAAGCCGATAATCGCGAATAGGGATCCAGCAGCTTGA ATGAAGAACGCTGGGAAGGCTGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATCACAAAACCGCCATTCCCGGGAAAGGTGGTGGTGAGCTCCGCCGTGATCAATGCTTCAGGGACACTCCATAAAAATGGGAAGACAATGAAGCCGATAATCGCGAATAGGGATCCAGCAGCTTGA ATGAAGAACGCTGGGAAGGCTGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATCACAAAACCGCCATTCCCGGGAAAGGTGGTGGTGAGCTCCGCCGTGATCAATGCTTCAGGGACACTCCATAAAAATGGGAAGACAATGAAGCCGATAATCGCGAATAGGGATCCAGCAGCTTGA MKNAGKAVMFMIPLKIFQVPMREPQKGPKARSAHITKPPFPGKVVVSSAVINASGTLHKNGKTMKPIIANRDPAA Homology
BLAST of ClCG04G003990 vs. NCBI nr
Match: KCW87084.1 (hypothetical protein EUGRSUZ_B03618 [Eucalyptus grandis]) HSP 1 Score: 98.6 bits (244), Expect = 2.4e-17 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of ClCG04G003990 vs. NCBI nr
Match: GFD51465.1 (hypothetical protein [Tanacetum cinerariifolium]) HSP 1 Score: 76.6 bits (187), Expect = 9.9e-11 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of ClCG04G003990 vs. NCBI nr
Match: ONK73361.1 (uncharacterized protein A4U43_C04F30430 [Asparagus officinalis]) HSP 1 Score: 61.6 bits (148), Expect = 3.3e-06 Identity = 35/65 (53.85%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of ClCG04G003990 vs. NCBI nr
Match: ABG22080.1 (hypothetical protein LOC_Os12g41634 [Oryza sativa Japonica Group]) HSP 1 Score: 60.1 bits (144), Expect = 9.6e-06 Identity = 31/55 (56.36%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of ClCG04G003990 vs. ExPASy TrEMBL
Match: A0A059D9C1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03618 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of ClCG04G003990 vs. ExPASy TrEMBL
Match: A0A699WV44 (Uncharacterized protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_923434 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.8e-11 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of ClCG04G003990 vs. ExPASy TrEMBL
Match: A0A0A9E3F8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09 Identity = 37/65 (56.92%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of ClCG04G003990 vs. ExPASy TrEMBL
Match: A0A5P1F9P4 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F30430 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06 Identity = 35/65 (53.85%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of ClCG04G003990 vs. ExPASy TrEMBL
Match: H2KX63 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g41634 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.6e-06 Identity = 31/55 (56.36%), Postives = 35/55 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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