ClCG04G003780 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG04G003780
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr04: 14717967 .. 14718275 (-)
RNA-Seq ExpressionClCG04G003780
SyntenyClCG04G003780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAAGATGAACCAGCGGAGAGCGAGATCGAGAGGAGAGTGAGACCGAGAGGAGAGCGAGATCGAAAGGAGAGCAACACTGAGAGGAGAGCGACACTAAGAGGAGAGCGACACTGTCACACTGCGAGACACGAGTGTGAGAAGAGCGACACTGCCGCTGCGAGTGCGAGGAGAGCGACAGCGAGTCAGCGATACTGCCGAGCTGAGTGTCTGAGAGGGAGAACGGGAGAGGAGAATGGAGCGACATGGTGTGGGTTTAGGTTCTGGCGTAATGGCGTAGGCGTTCTTCTGCTTCAGTGCTTCTGA

mRNA sequence

ATGAACGAAGATGAACCAGCGGAGAGCGAGATCGAGAGGAGAGTGAGACCGAGAGGAGAGCGAGATCGAAAGGAGAGCAACACTGAGAGGAGAGCGACACTAAGAGGAGAGCGACACTGTCACACTGCGAGACACGAGTGTGAGAAGAGCGACACTGCCGCTGCGAGTGCGAGGAGAGCGACAGCGAGTCAGCGATACTGCCGAGCTGAGTGTCTGAGAGGGAGAACGGGAGAGGAGAATGGAGCGACATGGTGTGGGTTTAGGTTCTGGCGTAATGGCGTAGGCGTTCTTCTGCTTCAGTGCTTCTGA

Coding sequence (CDS)

ATGAACGAAGATGAACCAGCGGAGAGCGAGATCGAGAGGAGAGTGAGACCGAGAGGAGAGCGAGATCGAAAGGAGAGCAACACTGAGAGGAGAGCGACACTAAGAGGAGAGCGACACTGTCACACTGCGAGACACGAGTGTGAGAAGAGCGACACTGCCGCTGCGAGTGCGAGGAGAGCGACAGCGAGTCAGCGATACTGCCGAGCTGAGTGTCTGAGAGGGAGAACGGGAGAGGAGAATGGAGCGACATGGTGTGGGTTTAGGTTCTGGCGTAATGGCGTAGGCGTTCTTCTGCTTCAGTGCTTCTGA

Protein sequence

MNEDEPAESEIERRVRPRGERDRKESNTERRATLRGERHCHTARHECEKSDTAAASARRATASQRYCRAECLRGRTGEENGATWCGFRFWRNGVGVLLLQCF
Homology
The following BLAST results are available for this feature:
BLAST of ClCG04G003780 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003780 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003780 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003780 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G003780.1ClCG04G003780.1mRNA