ClCG04G002890 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTCAGACCTGCGACATATAAGGTTTGACATGACTGAGATGATGGCTGGCATACAGACTATGATCAGCTTACTCAGGTCTTTCTGTCAGGTATGTATGGTTCGTATGTTTCGCACTATTTTTGTAAAATTTGTTTTCTTATCTAACTTAATTGTTTAATCGTGTAGGGTAATGGTGTGGATTTCACCGAGACATACCACACGGAGCCAAGTCAATGGAGATCACCATCCCACGCCCTACCGAGTCCACCACCCCACTCCCCACCGAGGTCACCACCCTACTCCCCACTAAGCCCACCATTGCACTCCCGTTCGAGTCCACTACCCCACTCCTGTTCGAGACCACCACCCCACTCCCCACTGAGGCAGTTTTTACCGAGTCCATAACCCCTCCGACCCACGAGGCCATCTTTCCCACTGAGACCACCCTTCCCACCAAGCCATGTCTCCCCACTAAGACATCCCTTCCCATCATTCCCACCATTTCACTTCCTCCACTACCCATCGGCCCACCCCCTCATCGAGCATATCCCTCTAGCATTCATAATCCCACCACTGTCCCAAACAACCATACAACACCCTAAGTTGCTCCCCTCACAACCGGCTAAGAAGGTCATACTAAAGGTAAAAGGGGAGCACACGGTGAAAGGAGAGCCTACGGTGAAGGTTGAATCGGTGGTTGAGCTGATGAAGCACGACCGGTGACCAAGCCGGTTAAGATTGAGCCAAAGAACAAGAAGGGGGAGGAACGAAAGTGGACTAGTAGGAAGAGAAAGTCGTCCCAACCGTACACCCCTCCAATCGAGGCAACAAAGGGGGCGACTAAGCTGCAACGATACATTCAACTAGGGGAACGCCCCACTGATAGGCCGCTTGTACCCTACGACCTGGCTCACTGAGTGCCTGACGAGGTCATGACGGAGTTCATGATATGGCTGACGAGCGAGAATATGGGTCCTCATAAGCCGGGCACAGGCATACTCTTTCGAAGAAACCACATGACGAAGGAGTTGTTTTGAAAGCTTACATGCGACAGTGAGTGGGTTGAGAATGATGTAAGTTACTAAACTACTATTTTACTAATTTATTATATATAATTGTGTATATCTATTAATCGATCAACTTGCAGACTCTCGATTCCATATTCATGTTCCTTCGACGGAAGTTCATTTCCAGATAGGAAATATGTGCACACTAGTACACCACGTTGCCCCATGACATATTGGTATGTAATCACACGTTAGTTATGAACTGTTTTTTAACTTTTAAGAGTGAATATTGACTGACAATTGGTTATTATTTTGCAAAGTCACCTAAATCTACATGGGGAACACAGCTTGTTCCATGCCATACATTGCAAAACAAGGAAAAAGTTGCAAAAGTATGGGAAAAAGAGGATTGCTATATGGATTTCGTGCTGGGGTTGGAATCGGAACACCAGCCGGGATGGTCAGAGGTTGATTTCGTCTATAGCTCCTTCAACTACAAGCAACATTGGATACTGGTGGCGATAGACGTCAACCTCGGCCACATCCTCCTATACGACTCCCTTCTATCATACGTCTCGTCGAGGGACCTAGTACAGTTTTTTTCGCCACTGCGCTACACTCTTCCTTCCCTATGTGAATTCTGCAATCTGAATAATTTGAAGCCTGATCTTTCGCCCGCTCCTTGA ATGCAGTCAGACCTGCGACATATAAGGTTTGACATGACTGAGATGATGGCTGGCATACAGACTATGATCAGCTTACTCAGGTCTTTCTGTCAGATCACCATCCCACGCCCTACCGAGTCCACCACCCCACTCCCCACCGAGGTCACCACCCTACTCCCCACTAAGCCCACCATTGCACTCCCGTTCGAGTCCACTACCCCACTCCTGTTCGAGACCACCACCCCACTCCCCACTGAGGCAGTTTTTACCGAGTCCATAACCCCTCCGACCCACGAGGCCATCTTTCCCACTGAGACCACCCTTCCCACCAAGCCATGTCTCCCCACTAAGACATCCCTTCCCATCATTCCCACCATTTCACTTCCTCCACTACCCATCGGCCCACCCCCTCATCGAGCATATCCCTCTAGCATTCATAATCCCACCACTTTGCTCCCCTCACAACCGGCTAAGAAGGTCATACTAAAGGTAAAAGGGGAGCACACGGTGAAAGGAGAGCCTACGGTGAAGCCGGTTAAGATTGAGCCAAAGAACAAGAAGGGGGAGGAACGAAAGTGGACTAGTAGGAAGAGAAAGTCGTCCCAACCGTACACCCCTCCAATCGAGGCAACAAAGGGGGCGACTAAGCTGCAACGATACATTCAACTAGGGGAACGCCCCACTGATAGGCCGCTTGTCATGACGGAGTTCATGATATGGCTGACGAGCGAGAATATGGGTCCTCATAAGCCGGGCACAGGCATACTCTTTCGAAGAAACCACATGACGAAGGAACTCTCGATTCCATATTCATGTTCCTTCGACGGAAGTTCATTTCCAGATAGGAAATATGTGCACACTAGTACACCACGTTGCCCCATGACATATTGGTATTCACCTAAATCTACATGGGGAACACAGCTTGTTCCATGCCATACATTGCAAAACAAGGAAAAAGTTGCAAAAGTATGGGAAAAAGAGGATTGCTATATGGATTTCGTGCTGGGGTTGGAATCGGAACACCAGCCGGGATGGTCAGAGGTTGATTTCGTCTATAGCTCCTTCAACTACAAGCAACATTGGATACTGGTGGCGATAGACGTCAACCTCGGCCACATCCTCCTATACGACTCCCTTCTATCATACGTCTCGTCGAGGGACCTAGTACAGTTTTTTTCGCCACTGCGCTACACTCTTCCTTCCCTATGTGAATTCTGCAATCTGAATAATTTGAAGCCTGATCTTTCGCCCGCTCCTTGA ATGCAGTCAGACCTGCGACATATAAGGTTTGACATGACTGAGATGATGGCTGGCATACAGACTATGATCAGCTTACTCAGGTCTTTCTGTCAGATCACCATCCCACGCCCTACCGAGTCCACCACCCCACTCCCCACCGAGGTCACCACCCTACTCCCCACTAAGCCCACCATTGCACTCCCGTTCGAGTCCACTACCCCACTCCTGTTCGAGACCACCACCCCACTCCCCACTGAGGCAGTTTTTACCGAGTCCATAACCCCTCCGACCCACGAGGCCATCTTTCCCACTGAGACCACCCTTCCCACCAAGCCATGTCTCCCCACTAAGACATCCCTTCCCATCATTCCCACCATTTCACTTCCTCCACTACCCATCGGCCCACCCCCTCATCGAGCATATCCCTCTAGCATTCATAATCCCACCACTTTGCTCCCCTCACAACCGGCTAAGAAGGTCATACTAAAGGTAAAAGGGGAGCACACGGTGAAAGGAGAGCCTACGGTGAAGCCGGTTAAGATTGAGCCAAAGAACAAGAAGGGGGAGGAACGAAAGTGGACTAGTAGGAAGAGAAAGTCGTCCCAACCGTACACCCCTCCAATCGAGGCAACAAAGGGGGCGACTAAGCTGCAACGATACATTCAACTAGGGGAACGCCCCACTGATAGGCCGCTTGTCATGACGGAGTTCATGATATGGCTGACGAGCGAGAATATGGGTCCTCATAAGCCGGGCACAGGCATACTCTTTCGAAGAAACCACATGACGAAGGAACTCTCGATTCCATATTCATGTTCCTTCGACGGAAGTTCATTTCCAGATAGGAAATATGTGCACACTAGTACACCACGTTGCCCCATGACATATTGGTATTCACCTAAATCTACATGGGGAACACAGCTTGTTCCATGCCATACATTGCAAAACAAGGAAAAAGTTGCAAAAGTATGGGAAAAAGAGGATTGCTATATGGATTTCGTGCTGGGGTTGGAATCGGAACACCAGCCGGGATGGTCAGAGGTTGATTTCGTCTATAGCTCCTTCAACTACAAGCAACATTGGATACTGGTGGCGATAGACGTCAACCTCGGCCACATCCTCCTATACGACTCCCTTCTATCATACGTCTCGTCGAGGGACCTAGTACAGTTTTTTTCGCCACTGCGCTACACTCTTCCTTCCCTATGTGAATTCTGCAATCTGAATAATTTGAAGCCTGATCTTTCGCCCGCTCCTTGA MQSDLRHIRFDMTEMMAGIQTMISLLRSFCQITIPRPTESTTPLPTEVTTLLPTKPTIALPFESTTPLLFETTTPLPTEAVFTESITPPTHEAIFPTETTLPTKPCLPTKTSLPIIPTISLPPLPIGPPPHRAYPSSIHNPTTLLPSQPAKKVILKVKGEHTVKGEPTVKPVKIEPKNKKGEERKWTSRKRKSSQPYTPPIEATKGATKLQRYIQLGERPTDRPLVMTEFMIWLTSENMGPHKPGTGILFRRNHMTKELSIPYSCSFDGSSFPDRKYVHTSTPRCPMTYWYSPKSTWGTQLVPCHTLQNKEKVAKVWEKEDCYMDFVLGLESEHQPGWSEVDFVYSSFNYKQHWILVAIDVNLGHILLYDSLLSYVSSRDLVQFFSPLRYTLPSLCEFCNLNNLKPDLSPAP Homology
BLAST of ClCG04G002890 vs. NCBI nr
Match: XP_038899753.1 (uncharacterized protein LOC120086987 [Benincasa hispida] >XP_038899754.1 uncharacterized protein LOC120086987 [Benincasa hispida]) HSP 1 Score: 94.0 bits (232), Expect = 3.3e-15 Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = 0
BLAST of ClCG04G002890 vs. NCBI nr
Match: XP_038902498.1 (uncharacterized protein LOC120089158 [Benincasa hispida]) HSP 1 Score: 84.3 bits (207), Expect = 2.6e-12 Identity = 89/326 (27.30%), Postives = 133/326 (40.80%), Query Frame = 0
BLAST of ClCG04G002890 vs. NCBI nr
Match: XP_038881126.1 (uncharacterized protein LOC120072727 [Benincasa hispida]) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-11 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of ClCG04G002890 vs. NCBI nr
Match: XP_038874902.1 (uncharacterized protein LOC120067405 [Benincasa hispida]) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-11 Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of ClCG04G002890 vs. NCBI nr
Match: XP_038875042.1 (uncharacterized protein LOC120067568 [Benincasa hispida]) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-11 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy Swiss-Prot
Match: O46598 (Hepatitis A virus cellular receptor 1 OS=Chlorocebus aethiops OX=9534 GN=HAVCR1 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 6.1e-04 Identity = 55/169 (32.54%), Postives = 76/169 (44.97%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy TrEMBL
Match: A0A6J1DN69 (uncharacterized protein LOC111022140 OS=Momordica charantia OX=3673 GN=LOC111022140 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-08 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy TrEMBL
Match: A0A6J1CPP7 (uncharacterized protein LOC111013439 OS=Momordica charantia OX=3673 GN=LOC111013439 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-07 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy TrEMBL
Match: A0A6J1DRI2 (uncharacterized protein LOC111022515 OS=Momordica charantia OX=3673 GN=LOC111022515 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-07 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy TrEMBL
Match: A0A5A7T796 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00060 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-06 Identity = 29/91 (31.87%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of ClCG04G002890 vs. ExPASy TrEMBL
Match: A0A6J1D492 (uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016890 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-05 Identity = 30/97 (30.93%), Postives = 52/97 (53.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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