ClCG04G002200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G002200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RanBP2-type domain-containing protein
Location	CG_Chr04: 7234554 .. 7237619 (-)
RNA-Seq Expression	ClCG04G002200
Synteny	ClCG04G002200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTTCAGTCAACATGGTAAATTTCTTTCTTACTCTGTCGCATGTTCTTGGTTTTGTAACTACAGAATAGGAACAGATGCTGCTCACTCGTTGTCCAAATTATTGTTGGTTTGTAGAGTTAAATACGAGTCTTTTCTTGTAGGTGTTCTTCTGAACTTTTGACATTTAATGATTGCGAGCAATGTGAACTGCAATAGATGAGTTGTTTTGTGTAAGCTATATGGACTGCTATAAAATTAATTTTCATTTGGATTTGGAATGGTCTTTGAATTTGAGAATTTAATACTGCTAATTGCTTTTCCTGTTACAGTTATCCTGGAAATGCATAAATGTGAATAAAACGAGTTGTGGAAAAAGCAAGAATCAAAACAATCGATCAAAACAATCAAGATCAAGAGTGGTTTAAAAGCTTAAATATCATTTAAGGATTTAGGATTTCAGGTTTCAAACCAAATATTGTGTATGCATTACCTTCTTGGCCTTTCCCTGTACATAATATAAAATCATAACCAATAAAAGGGCACATGCCAAAATCAACCTAATGACAAATCAGAGGTTGGGGAAAGATATTTTTAACGACACAGTGAGCGCAATACTCAAAGTCATCTTCAGCTATGCATAACTTGAGGTGTTGCTATGGCAACTCAGAAATGCATTGCTAAAAGCTTCTCTAGTGATGTTGGTGGACTTTTTGCAGTCACGGAATATGTAACATTTTGTAATGTACTTTAGATGGATATCTTATGGTTGCAGACTTTTCTATAGTCATGAATAGAGGCTGTCAAATTATATATCCACCACTGAACAACATAATTTGCATCAGTTCATCAAGCCTTCTGTTGTGAAATTCTTTTATCATTTTATCGATAAATGTGGTAGCCGTTCACCCGAAACTGTGAGAATTGGAGAGCCTCTTTGCTCCACTCTGTTCTCCCACGTGAACCTTGAATATAATTTGGTATTGATTGCTCCAGGCAGTTTGGTACCCTAGTTATTTTGTATTTCTTTTTGAAACAATATTTGCTTGAGTTGCAATGCATTAACTGCTTTTGACTTGTGCTGTTTTATCTAATTAGCTTTAGAGAATGCTGCTCTTTCCTCTTTGTTTTGCTGTCCCTACTTTAACCATCTTTCTATTGGATATTACAGGAAATAAGCACACGCCAGAATGCTACCACTACTAGCTTACCAAGTGGTTAGCCAATATTACAGGCTCCAAAGGAACCCCATCACTGTGGGGCTCCTTGCCGCTAATACTCTCATTCATCTAAGGCCCGATTTTCTTCATCCTATCATCCCTTCCATAGAGGATGTCTGGTTTAATGCGCATCTCATCCTCAAGGTGACTATTCTGGCTAATCATTTAATTCTATTGTCCTGCTCTCTGTTTGTTTAAGACTAGGTAGCATTGTTTGTTTTGTTTTTTTAGTGCACTCTCTATCTTTGGGTTAATTGGTGATAATTATAAGGATTTAATGATGGATCTTTCTGTTTAGGACCTTCCTATTTATTAATACGTTGTTAGGAAAGTCCTGAACAGAATGGCATGTTTCTTTCACGGGATTTAATGCGTTGCTGTCTCATTCAGAAAAAGATATCATATTCCTTTTTCGATCAGCTGTATAACAAATTTTGTAGCTATTGATACTGACTGCCTGCTTTATAGCATCACCGTAACAAATAGGATTTTCTTTTTTCTTTTTTTTTTCCTCTCTCTTCTTTTTTTATTAAAAATTATTTTTAATAGTCAATTTATTAAATTTGTTTTTAAAAATTGAATTTTGATTTATTATTATTATTATTATTTTATATAGCCGGAAAATTATCTTTCATTGAGAAAAATGGAAGAAATTAGTGGATTCTATTTTAATTGTATGCTTTATTATAAGGAATGGTTCATGGTATGATGTCAATCGTTACAAGATGCATCTAGACTGGTTTGCCCCACATAACTGTGTAATTTGTGTCCTTCCAAGTCCTCAGAATGGGGTTATTGTATGATAGGCCTCGAATTATAGTAAACTCTGATTTTGAGAAAAATGAGAAGCTTTTAAGAGTTTTGATGCTTTTGCTTTACAATATCCTCAGGCACTTGCTTTTTAGTAGTCTATTCCTTTGATCTCCCTCGCTAAGGATATACCTAGGAATTTTGAACTCTTGTAGGATTGTTTTCTTTTAGTTGTTTATCAATTTGTTTGTATGTCTTTTTTGAATGAGACAATATCATATTGGCATTGTAACACTTTCATAATATTGGTATCATTTGCATTTGCCAGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTTCAACATGATATCCTTACTATGGAAAGGCATTCAATTGGAAACATCAATGGGTAGTATCGAATTTGCTTCAATGGTTGGTGCGTTACTCGTAATGTCACAGGGAATTACCTTGATGCTCATAAAATCCCTACTAGTTTTCTTTAATTACGAGAGGCCTTACTTCTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAAGCTGAAAGCTACACTTACCTTCATGGTATAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATACTTATCCAAATGGTTTCACCTGGCGCCTCTTTCCTTGGACATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGTGTACGAATTCAGGGTCGGATCCGTTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGAATTTTATATCGCTTGAATCCGTTTCGACAGTGTAGGATATTTGGAGGAGGAATGGTTGGTAGACGACAGACAGCCTTGGAAAGGACTACGAGTATCGATACATGGAGATGTCAAGCATGTACATTTGACAATTCTGGTTTATTAAGCATATGTGAAATGTGTGGGACAGATCGGCAGGATAGGGTGCTGCCTTCTCATCAATTATCACATCATTTTGATTTAAGTCGAGAGGAAGTGCGTCATCGGAGGCTTGAAAGATTTGGATGA

mRNA sequence

ATGCTTTTATCCTGGAAATGCATAAATGTGAATAAAACGAGTTGTGGAAAAAGCAAGAATCAAAACAATCGATCAAAACAATCAAGATCAAGAGTGAGGCTGTCAAATTATATATCCACCACTGAACAACATAATTTGCATCAGTTCATCAAGCCTTCTGTTGTGAAATTCTTTTATCATTTTATCGATAAATGTGGTAGCCGTTCACCCGAAACTGTGAGAATTGGAGAGCCTCTTTGCTCCACTCTGTTCTCCCACGTGAACCTTGAATATAATTTGGTATTGATTGCTCCAGGCAGTTTGAATATTTGCTTGAGTTGCAATGCATTAACTGCTTTTGACTTGCTCCAAAGGAACCCCATCACTGTGGGGCTCCTTGCCGCTAATACTCTCATTCATCTAAGGCCCGATTTTCTTCATCCTATCATCCCTTCCATAGAGGATGTCTGGTTTAATGCGCATCTCATCCTCAAGCCGGAAAATTATCTTTCATTGAGAAAAATGGAAGAAATTAGTGGATTCTATTTTAATTGTATGCTTTATTATAAGGAATGGTTCATGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTTCAACATGATATCCTTACTATGGAAAGGCATTCAATTGGAAACATCAATGGGTAGTATCGAATTTGCTTCAATGGTTGGTGCGTTACTCGTAATGTCACAGGGAATTACCTTGATGCTCATAAAATCCCTACTAGTTTTCTTTAATTACGAGAGGCCTTACTTCTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAAGCTGAAAGCTACACTTACCTTCATGGTATAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATACTTATCCAAATGGTTTCACCTGGCGCCTCTTTCCTTGGACATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGTGTACGAATTCAGGGTCGGATCCGTTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGAATTTTATATCGCTTGAATCCGTTTCGACAGTGTAGGATATTTGGAGGAGGAATGGTTGGTAGACGACAGACAGCCTTGGAAAGGACTACGAGTATCGATACATGGAGATGTCAAGCATGTACATTTGACAATTCTGGTTTATTAAGCATATGTGAAATGTGTGGGACAGATCGGCAGGATAGGGTGCTGCCTTCTCATCAATTATCACATCATTTTGATTTAAGTCGAGAGGAAGTGCGTCATCGGAGGCTTGAAAGATTTGGATGA

Coding sequence (CDS)

ATGCTTTTATCCTGGAAATGCATAAATGTGAATAAAACGAGTTGTGGAAAAAGCAAGAATCAAAACAATCGATCAAAACAATCAAGATCAAGAGTGAGGCTGTCAAATTATATATCCACCACTGAACAACATAATTTGCATCAGTTCATCAAGCCTTCTGTTGTGAAATTCTTTTATCATTTTATCGATAAATGTGGTAGCCGTTCACCCGAAACTGTGAGAATTGGAGAGCCTCTTTGCTCCACTCTGTTCTCCCACGTGAACCTTGAATATAATTTGGTATTGATTGCTCCAGGCAGTTTGAATATTTGCTTGAGTTGCAATGCATTAACTGCTTTTGACTTGCTCCAAAGGAACCCCATCACTGTGGGGCTCCTTGCCGCTAATACTCTCATTCATCTAAGGCCCGATTTTCTTCATCCTATCATCCCTTCCATAGAGGATGTCTGGTTTAATGCGCATCTCATCCTCAAGCCGGAAAATTATCTTTCATTGAGAAAAATGGAAGAAATTAGTGGATTCTATTTTAATTGTATGCTTTATTATAAGGAATGGTTCATGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTTCAACATGATATCCTTACTATGGAAAGGCATTCAATTGGAAACATCAATGGGTAGTATCGAATTTGCTTCAATGGTTGGTGCGTTACTCGTAATGTCACAGGGAATTACCTTGATGCTCATAAAATCCCTACTAGTTTTCTTTAATTACGAGAGGCCTTACTTCTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAAGCTGAAAGCTACACTTACCTTCATGGTATAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATACTTATCCAAATGGTTTCACCTGGCGCCTCTTTCCTTGGACATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGTGTACGAATTCAGGGTCGGATCCGTTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGAATTTTATATCGCTTGAATCCGTTTCGACAGTGTAGGATATTTGGAGGAGGAATGGTTGGTAGACGACAGACAGCCTTGGAAAGGACTACGAGTATCGATACATGGAGATGTCAAGCATGTACATTTGACAATTCTGGTTTATTAAGCATATGTGAAATGTGTGGGACAGATCGGCAGGATAGGGTGCTGCCTTCTCATCAATTATCACATCATTTTGATTTAAGTCGAGAGGAAGTGCGTCATCGGAGGCTTGAAAGATTTGGATGA

Protein sequence

MLLSWKCINVNKTSCGKSKNQNNRSKQSRSRVRLSNYISTTEQHNLHQFIKPSVVKFFYHFIDKCGSRSPETVRIGEPLCSTLFSHVNLEYNLVLIAPGSLNICLSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLSLRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPLTLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDNSGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG

Homology

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BLAST of ClCG04G002200 vs. NCBI nr
Match: XP_038881196.1 (rhomboid-like protein 14, mitochondrial [Benincasa hispida])

HSP 1 Score: 506.1 bits (1302), Expect = 3.0e-139
Identity = 269/344 (78.20%), Postives = 281/344 (81.69%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQRNPITVGLLA NTLIHLRP+FL  IIPSI+DVWFNAHLILK      
Sbjct: 5   LAYQVVSQYYRLQRNPITVGLLATNTLIHLRPNFLRHIIPSIDDVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  HKDLKRFLLSPFYHVGDPHLV+NMISLLWKGIQLETS
Sbjct: 65  -----------------------HKDLKRFLLSPFYHVGDPHLVYNMISLLWKGIQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMV ALLVMSQGITL+LIKSLLV FNY+RPY+YEYSVGFSGVLFAMKVVLGSQ
Sbjct: 125 MGSIEFASMVSALLVMSQGITLLLIKSLLV-FNYDRPYYYEYSVGFSGVLFAMKVVLGSQ 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
           AESYTYLHGIRVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSD L
Sbjct: 185 AESYTYLHGIRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDLL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIR  G+ILSRPLG   RLNPFRQ RIFGGG VG R       TSIDTWRCQACTFDN
Sbjct: 245 TLLIRRAGQILSRPLGFFCRLNPFRQRRIFGGGTVGSRP-----ATSIDTWRCQACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLSICEMCGTDRQDRVLP H LS  FDL+REEVR RRLERFG
Sbjct: 305 SGLLSICEMCGTDRQDRVLPLHHLSRQFDLTREEVRRRRLERFG 313

[Close]

BLAST of ClCG04G002200 vs. NCBI nr
Match: XP_008442110.1 (PREDICTED: rhomboid-like protein 14, mitochondrial [Cucumis melo] >KAA0034920.1 rhomboid-like protein 14 [Cucumis melo var. makuwa] >TYK05460.1 rhomboid-like protein 14 [Cucumis melo var. makuwa])

HSP 1 Score: 496.5 bits (1277), Expect = 2.4e-136
Identity = 259/344 (75.29%), Postives = 280/344 (81.40%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQ NPIT+GLLA+NTLIHLRP+FLH IIPSI++VWFNAHLILK      
Sbjct: 5   LAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  HKDLKRFLLSPFYHVGDPHLV+NMISLLWKG QLETS
Sbjct: 65  -----------------------HKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMVGALLVMSQGITL+LIKSLL+FFNY RPY+YEYSVGFSGVLFA+KVVLGS+
Sbjct: 125 MGSIEFASMVGALLVMSQGITLLLIKSLLIFFNYGRPYYYEYSVGFSGVLFALKVVLGSE 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
            ESYTY+HG+RVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSDPL
Sbjct: 185 TESYTYIHGLRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIRSVGRILSRPLG   RLNPFRQ RIFGGG VG R       TSI TWRC+ACTFDN
Sbjct: 245 TLLIRSVGRILSRPLGFFSRLNPFRQRRIFGGGTVGSRP-----VTSIGTWRCRACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLS CEMCGTDRQD VL S+QLS   D +REE+R RRLERFG
Sbjct: 305 SGLLSTCEMCGTDRQDGVLHSNQLSSQLDFTREEMRRRRLERFG 314

[Close]

BLAST of ClCG04G002200 vs. NCBI nr
Match: XP_004146389.1 (rhomboid-like protein 14, mitochondrial [Cucumis sativus] >XP_011653901.1 rhomboid-like protein 14, mitochondrial [Cucumis sativus] >KGN54804.1 hypothetical protein Csa_012505 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 6.5e-134
Identity = 256/344 (74.42%), Postives = 277/344 (80.52%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQ NPIT+GLLA+NTLIHLRP+FLH IIPSI++VWFNAHLI        
Sbjct: 5   LAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLI-------- 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                F HKDLKRFLLSPFYHVGDPHLV+NMISLLWKG QLETS
Sbjct: 65  ---------------------FKHKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMVGALL+MSQGITL+LIKSLL+FFNY RPY+YEYSVGFSGVLFAMKVVLGS+
Sbjct: 125 MGSIEFASMVGALLIMSQGITLLLIKSLLIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSE 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
            +SYTY+HG+RVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSDPL
Sbjct: 185 TDSYTYVHGLRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIRSVGRILSR  G   RLNPFRQ RIFGGG VG R       TSI TWRCQACTFDN
Sbjct: 245 TLLIRSVGRILSRSYGFFCRLNPFRQRRIFGGGTVGSRP-----VTSIGTWRCQACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLS CEMCGTDRQD VL S+QLS   DL+ EE+R RRLERFG
Sbjct: 305 SGLLSACEMCGTDRQDGVLHSNQLSSQLDLTWEEMRRRRLERFG 314

[Close]

BLAST of ClCG04G002200 vs. NCBI nr
Match: XP_022152348.1 (rhomboid-like protein 14, mitochondrial [Momordica charantia] >XP_022152349.1 rhomboid-like protein 14, mitochondrial [Momordica charantia])

HSP 1 Score: 479.6 bits (1233), Expect = 3.0e-131
Identity = 249/348 (71.55%), Postives = 282/348 (81.03%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+ + ++ +  L++NPITVGLLAANTLIHLRPD LHPIIP IEDVWFNAHLILK      
Sbjct: 5   LAYHVVSQYYRLRKNPITVGLLAANTLIHLRPDCLHPIIPYIEDVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  +KDL+RF LSPFYHVGDPHLV+NMISLLWKGIQLETS
Sbjct: 65  -----------------------YKDLRRFFLSPFYHVGDPHLVYNMISLLWKGIQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGS +FASMVG+LLV+SQGITL+L+KSLL+FFNY RPY+ EYSVGFSGVLFAMKVVL SQ
Sbjct: 125 MGSFKFASMVGSLLVLSQGITLLLVKSLLIFFNYGRPYYREYSVGFSGVLFAMKVVLSSQ 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
           +ESYTY HG+RVPSSHAAW+ELILIQMVSPG SFLGHLGGILAG+LFL+LK  NSGS+PL
Sbjct: 185 SESYTYFHGLRVPSSHAAWVELILIQMVSPGVSFLGHLGGILAGILFLQLKHMNSGSNPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERT-TSIDTWRCQACTFD 404
            +L RS+GRILS+PLG L RLNPFR+ RI GGG+VGR+QTA ERT TS D W C+ACTFD
Sbjct: 245 AILFRSLGRILSQPLGFLCRLNPFRRHRISGGGIVGRQQTASERTATSDDMWSCRACTFD 304

Query: 405 NSGLLSICEMCGTDRQDRVLPSHQLSHHF---DLSREEVRHRRLERFG 449
           NSG LSICEMCGT+RQD  LPSHQ SH F   DLS EE+R RR+ERFG
Sbjct: 305 NSGFLSICEMCGTNRQDIELPSHQSSHSFNFNDLSLEELRRRRVERFG 323

[Close]

BLAST of ClCG04G002200 vs. NCBI nr
Match: XP_022967849.1 (rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967850.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967852.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967853.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967854.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima])

HSP 1 Score: 478.0 bits (1229), Expect = 8.8e-131
Identity = 249/344 (72.38%), Postives = 275/344 (79.94%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   +T ++ LQ  PITVGLLA NTLIHLRP FL  +IPSI+DVWFNA+LILK      
Sbjct: 5   LAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  +KDLKRF LSPFYHVGD HL +NMISLLWKGIQLE+S
Sbjct: 65  -----------------------YKDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGS +FASMVGALLVMSQGITL+L+KSLL FFNYERPY++EYSVGFSGVLFAMKVVLGSQ
Sbjct: 125 MGSTKFASMVGALLVMSQGITLLLVKSLL-FFNYERPYYHEYSVGFSGVLFAMKVVLGSQ 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
           +ESYTY+HG+RVPSSHAAWLELILIQ+VSPG SFLGHLGGILAG+LFLRLK  NSGSDPL
Sbjct: 185 SESYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
            +LIRSVGRILSRPLG   RLNPFR  RIFGGG VGRRQ      TS+DTWRCQACTFDN
Sbjct: 245 AVLIRSVGRILSRPLGFFCRLNPFRHHRIFGGGTVGRRQ------TSVDTWRCQACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           S LL  CEMCGTDRQDR +PS +LSH FDL+ EE+R RRLERFG
Sbjct: 305 SCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTPEELRRRRLERFG 312

[Close]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot
Match: Q8RXW0 (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 5.4e-91
Identity = 181/332 (54.52%), Postives = 226/332 (68.07%), Query Frame = 0


Query: 120 PITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLSLRKMEEISGFYFNCM 179
           P+T  LLAANTL++LRP F+ P+IP I +VWFN HLI                       
Sbjct: 34  PVTASLLAANTLVYLRPAFIDPVIPHISEVWFNPHLI----------------------- 93

Query: 180 LYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMVGALLV 239
                 F HKDLKR  LS FYHV +PHLV+NM+SLLWKGI+LETSMGS EFASMV  L+ 
Sbjct: 94  ------FKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIG 153

Query: 240 MSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAESYTYLHGIRVPSS 299
           MSQG+TL+L KSLL+ F+Y+R Y+ EY+VGFSGVLFAMKVVL SQAE Y+ ++GI VP+ 
Sbjct: 154 MSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTK 213

Query: 300 HAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPLTLLIRSVGRILSRPL 359
           +AAW ELIL+QM  P ASFLGHLGGILAG+++L+LK + SGSDP+T+ +R V R+++ PL
Sbjct: 214 YAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPL 273

Query: 360 GILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDNSGLLSICEMCGTDRQ 419
             L  +   R+ RI G G VGR QT +        WRCQ+CT+DNSG LS CEMCG+ R 
Sbjct: 274 RFLNGMVRSRRRRITGRGRVGRGQTGI---AGPGIWRCQSCTYDNSGWLSACEMCGSGRA 333

Query: 420 D----RVLPSHQLSHHFDLSREEVRHRRLERF 448
                 +     LS   DL  +E+R RR+ERF
Sbjct: 334 RGNGWSLNQGPALSSSNDLPLDELRRRRVERF 333

[Close]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot
Match: Q8TEB9 (Rhomboid-related protein 4 OS=Homo sapiens OX=9606 GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.4e-24
Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 0


Query: 175 YFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMV 234
           Y +C L  ++ +  KD +R LLSP +H  D HL FNM S+LWKGI LE  +GS  FA ++
Sbjct: 50  YSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVI 109

Query: 235 GALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAE-SYTYLHG 294
            A  V++ G+  +L++  +  F  E  +    +VGFSGVLFA+KV+        +  + G
Sbjct: 110 TAFSVLT-GVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 169

Query: 295 IRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLF 332
             VP+  A W+EL+ I + SPG SF GHL GIL GL++
Sbjct: 170 FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMY 205

[Close]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot
Match: Q8BHC7 (Rhomboid-related protein 4 OS=Mus musculus OX=10090 GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-22
Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 175 YFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMV 234
           Y +C +  ++ +  KD +R LLSP +H  D HL FNM+S+LWKG++LE  +GS  FA ++
Sbjct: 50  YHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVI 109

Query: 235 GALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAE-SYTYLHG 294
               +++ G+  +L++  +     +  +    +VGFSGVLFA+KV+        +  + G
Sbjct: 110 ATFSLLT-GVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILG 169

Query: 295 IRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLF 332
             VP+  A W EL+ I   +PG SF GHL GIL GL++
Sbjct: 170 FPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMY 205

[Close]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot
Match: Q5RBS4 (Rhomboid-related protein 4 OS=Pongo abelii OX=9601 GN=RHBDD1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-22
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 175 YFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMV 234
           Y +C L  ++ +  +D +R LLSP +H  D HL FN  S+LWKGI LE  +GS  FA ++
Sbjct: 50  YSSC-LSVEKCYQQRDWQRLLLSPLHHADDWHLYFNTASVLWKGINLERRLGSRWFAYVI 109

Query: 235 GALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAE-SYTYLHG 294
               V++ G+  +L++  +  F  E  +    +VGFSGVLFA+KV+        +  + G
Sbjct: 110 TTFSVLT-GVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 169

Query: 295 IRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLF 332
             VP+  A W+EL+ I + SPG SF GH  GIL GL++
Sbjct: 170 FPVPNRFACWVELVAIHLFSPGTSFAGHQAGILVGLMY 205

[Close]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot
Match: Q4V8F3 (Rhomboid-related protein 4 OS=Rattus norvegicus OX=10116 GN=Rhbdd1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-20
Identity = 59/158 (37.34%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 175 YFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMV 234
           Y +C +  ++ +   D +R LLSP +H  D HL FNM+S+LWKG++LE  +GS  FA ++
Sbjct: 50  YHSC-ISVEKCYQQNDWQRLLLSPVHHGDDWHLYFNMVSMLWKGVKLEKRLGSRWFAYII 109

Query: 235 GALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAE-SYTYLHG 294
               +++ G+  +L++        +  +    +VGFSGVLFA+KV+        +  + G
Sbjct: 110 ATFSLLT-GVVYLLLQFASAELMNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILG 169

Query: 295 IRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLF 332
             VP+  A W EL  I   +PG SF GHL GIL GL++
Sbjct: 170 FPVPNRFACWAELAAIHFCTPGTSFAGHLAGILVGLMY 205

[Close]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL
Match: A0A5A7SVC3 (Rhomboid-like protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001640 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 1.2e-136
Identity = 259/344 (75.29%), Postives = 280/344 (81.40%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQ NPIT+GLLA+NTLIHLRP+FLH IIPSI++VWFNAHLILK      
Sbjct: 5   LAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  HKDLKRFLLSPFYHVGDPHLV+NMISLLWKG QLETS
Sbjct: 65  -----------------------HKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMVGALLVMSQGITL+LIKSLL+FFNY RPY+YEYSVGFSGVLFA+KVVLGS+
Sbjct: 125 MGSIEFASMVGALLVMSQGITLLLIKSLLIFFNYGRPYYYEYSVGFSGVLFALKVVLGSE 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
            ESYTY+HG+RVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSDPL
Sbjct: 185 TESYTYIHGLRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIRSVGRILSRPLG   RLNPFRQ RIFGGG VG R       TSI TWRC+ACTFDN
Sbjct: 245 TLLIRSVGRILSRPLGFFSRLNPFRQRRIFGGGTVGSRP-----VTSIGTWRCRACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLS CEMCGTDRQD VL S+QLS   D +REE+R RRLERFG
Sbjct: 305 SGLLSTCEMCGTDRQDGVLHSNQLSSQLDFTREEMRRRRLERFG 314

[Close]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL
Match: A0A1S3B4I1 (rhomboid-like protein 14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486069 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 1.2e-136
Identity = 259/344 (75.29%), Postives = 280/344 (81.40%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQ NPIT+GLLA+NTLIHLRP+FLH IIPSI++VWFNAHLILK      
Sbjct: 5   LAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  HKDLKRFLLSPFYHVGDPHLV+NMISLLWKG QLETS
Sbjct: 65  -----------------------HKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMVGALLVMSQGITL+LIKSLL+FFNY RPY+YEYSVGFSGVLFA+KVVLGS+
Sbjct: 125 MGSIEFASMVGALLVMSQGITLLLIKSLLIFFNYGRPYYYEYSVGFSGVLFALKVVLGSE 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
            ESYTY+HG+RVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSDPL
Sbjct: 185 TESYTYIHGLRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIRSVGRILSRPLG   RLNPFRQ RIFGGG VG R       TSI TWRC+ACTFDN
Sbjct: 245 TLLIRSVGRILSRPLGFFSRLNPFRQRRIFGGGTVGSRP-----VTSIGTWRCRACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLS CEMCGTDRQD VL S+QLS   D +REE+R RRLERFG
Sbjct: 305 SGLLSTCEMCGTDRQDGVLHSNQLSSQLDFTREEMRRRRLERFG 314

[Close]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL
Match: A0A0A0L173 (RanBP2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G506850 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 3.2e-134
Identity = 256/344 (74.42%), Postives = 277/344 (80.52%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   ++ +  LQ NPIT+GLLA+NTLIHLRP+FLH IIPSI++VWFNAHLI        
Sbjct: 5   LAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLI-------- 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                F HKDLKRFLLSPFYHVGDPHLV+NMISLLWKG QLETS
Sbjct: 65  ---------------------FKHKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGSIEFASMVGALL+MSQGITL+LIKSLL+FFNY RPY+YEYSVGFSGVLFAMKVVLGS+
Sbjct: 125 MGSIEFASMVGALLIMSQGITLLLIKSLLIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSE 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
            +SYTY+HG+RVPSSHAAWLELILIQMVSPG SFLGHLGGILAGLLFLRLK TNSGSDPL
Sbjct: 185 TDSYTYVHGLRVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
           TLLIRSVGRILSR  G   RLNPFRQ RIFGGG VG R       TSI TWRCQACTFDN
Sbjct: 245 TLLIRSVGRILSRSYGFFCRLNPFRQRRIFGGGTVGSRP-----VTSIGTWRCQACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           SGLLS CEMCGTDRQD VL S+QLS   DL+ EE+R RRLERFG
Sbjct: 305 SGLLSACEMCGTDRQDGVLHSNQLSSQLDLTWEEMRRRRLERFG 314

[Close]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL
Match: A0A6J1DFR9 (rhomboid-like protein 14, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020093 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.5e-131
Identity = 249/348 (71.55%), Postives = 282/348 (81.03%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+ + ++ +  L++NPITVGLLAANTLIHLRPD LHPIIP IEDVWFNAHLILK      
Sbjct: 5   LAYHVVSQYYRLRKNPITVGLLAANTLIHLRPDCLHPIIPYIEDVWFNAHLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  +KDL+RF LSPFYHVGDPHLV+NMISLLWKGIQLETS
Sbjct: 65  -----------------------YKDLRRFFLSPFYHVGDPHLVYNMISLLWKGIQLETS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGS +FASMVG+LLV+SQGITL+L+KSLL+FFNY RPY+ EYSVGFSGVLFAMKVVL SQ
Sbjct: 125 MGSFKFASMVGSLLVLSQGITLLLVKSLLIFFNYGRPYYREYSVGFSGVLFAMKVVLSSQ 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
           +ESYTY HG+RVPSSHAAW+ELILIQMVSPG SFLGHLGGILAG+LFL+LK  NSGS+PL
Sbjct: 185 SESYTYFHGLRVPSSHAAWVELILIQMVSPGVSFLGHLGGILAGILFLQLKHMNSGSNPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERT-TSIDTWRCQACTFD 404
            +L RS+GRILS+PLG L RLNPFR+ RI GGG+VGR+QTA ERT TS D W C+ACTFD
Sbjct: 245 AILFRSLGRILSQPLGFLCRLNPFRRHRISGGGIVGRQQTASERTATSDDMWSCRACTFD 304

Query: 405 NSGLLSICEMCGTDRQDRVLPSHQLSHHF---DLSREEVRHRRLERFG 449
           NSG LSICEMCGT+RQD  LPSHQ SH F   DLS EE+R RR+ERFG
Sbjct: 305 NSGFLSICEMCGTNRQDIELPSHQSSHSFNFNDLSLEELRRRRVERFG 323

[Close]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL
Match: A0A6J1HXX5 (rhomboid-like protein 14, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467237 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 4.3e-131
Identity = 249/344 (72.38%), Postives = 275/344 (79.94%), Query Frame = 0


Query: 105 LSCNALTAFDLLQRNPITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLS 164
           L+   +T ++ LQ  PITVGLLA NTLIHLRP FL  +IPSI+DVWFNA+LILK      
Sbjct: 5   LAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILK------ 64

Query: 165 LRKMEEISGFYFNCMLYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETS 224
                                  +KDLKRF LSPFYHVGD HL +NMISLLWKGIQLE+S
Sbjct: 65  -----------------------YKDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESS 124

Query: 225 MGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQ 284
           MGS +FASMVGALLVMSQGITL+L+KSLL FFNYERPY++EYSVGFSGVLFAMKVVLGSQ
Sbjct: 125 MGSTKFASMVGALLVMSQGITLLLVKSLL-FFNYERPYYHEYSVGFSGVLFAMKVVLGSQ 184

Query: 285 AESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPL 344
           +ESYTY+HG+RVPSSHAAWLELILIQ+VSPG SFLGHLGGILAG+LFLRLK  NSGSDPL
Sbjct: 185 SESYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPL 244

Query: 345 TLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDN 404
            +LIRSVGRILSRPLG   RLNPFR  RIFGGG VGRRQ      TS+DTWRCQACTFDN
Sbjct: 245 AVLIRSVGRILSRPLGFFCRLNPFRHHRIFGGGTVGRRQ------TSVDTWRCQACTFDN 304

Query: 405 SGLLSICEMCGTDRQDRVLPSHQLSHHFDLSREEVRHRRLERFG 449
           S LL  CEMCGTDRQDR +PS +LSH FDL+ EE+R RRLERFG
Sbjct: 305 SCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTPEELRRRRLERFG 312

[Close]

BLAST of ClCG04G002200 vs. TAIR 10
Match: AT3G17611.1 (RHOMBOID-like protein 14 )

HSP 1 Score: 336.3 bits (861), Expect = 3.9e-92
Identity = 181/332 (54.52%), Postives = 226/332 (68.07%), Query Frame = 0


Query: 120 PITVGLLAANTLIHLRPDFLHPIIPSIEDVWFNAHLILKPENYLSLRKMEEISGFYFNCM 179
           P+T  LLAANTL++LRP F+ P+IP I +VWFN HLI                       
Sbjct: 34  PVTASLLAANTLVYLRPAFIDPVIPHISEVWFNPHLI----------------------- 93

Query: 180 LYYKEWFMHKDLKRFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMVGALLV 239
                 F HKDLKR  LS FYHV +PHLV+NM+SLLWKGI+LETSMGS EFASMV  L+ 
Sbjct: 94  ------FKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIG 153

Query: 240 MSQGITLMLIKSLLVFFNYERPYFYEYSVGFSGVLFAMKVVLGSQAESYTYLHGIRVPSS 299
           MSQG+TL+L KSLL+ F+Y+R Y+ EY+VGFSGVLFAMKVVL SQAE Y+ ++GI VP+ 
Sbjct: 154 MSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTK 213

Query: 300 HAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKCTNSGSDPLTLLIRSVGRILSRPL 359
           +AAW ELIL+QM  P ASFLGHLGGILAG+++L+LK + SGSDP+T+ +R V R+++ PL
Sbjct: 214 YAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPL 273

Query: 360 GILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWRCQACTFDNSGLLSICEMCGTDRQ 419
             L  +   R+ RI G G VGR QT +        WRCQ+CT+DNSG LS CEMCG+ R 
Sbjct: 274 RFLNGMVRSRRRRITGRGRVGRGQTGI---AGPGIWRCQSCTYDNSGWLSACEMCGSGRA 333

Query: 420 D----RVLPSHQLSHHFDLSREEVRHRRLERF 448
                 +     LS   DL  +E+R RR+ERF
Sbjct: 334 RGNGWSLNQGPALSSSNDLPLDELRRRRVERF 333

[Close]

BLAST of ClCG04G002200 vs. TAIR 10
Match: AT3G17611.2 (RHOMBOID-like protein 14 )

HSP 1 Score: 257.3 bits (656), Expect = 2.3e-68
Identity = 139/241 (57.68%), Postives = 176/241 (73.03%), Query Frame = 0


Query: 211 MISLLWKGIQLETSMGSIEFASMVGALLVMSQGITLMLIKSLLVFFNYERPYFYEYSVGF 270
           M+SLLWKGI+LETSMGS EFASMV  L+ MSQG+TL+L KSLL+ F+Y+R Y+ EY+VGF
Sbjct: 1   MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGF 60

Query: 271 SGVLFAMKVVLGSQAESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLL 330
           SGVLFAMKVVL SQAE Y+ ++GI VP+ +AAW ELIL+QM  P ASFLGHLGGILAG++
Sbjct: 61  SGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGII 120

Query: 331 FLRLKCTNSGSDPLTLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTT 390
           +L+LK + SGSDP+T+ +R V R+++ PL  L  +   R+ RI G G VGR QT +    
Sbjct: 121 YLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGI---A 180

Query: 391 SIDTWRCQACTFDNSGLLSICEMCGTDRQD----RVLPSHQLSHHFDLSREEVRHRRLER 448
               WRCQ+CT+DNSG LS CEMCG+ R       +     LS   DL  +E+R RR+ER
Sbjct: 181 GPGIWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVER 238

[Close]

BLAST of ClCG04G002200 vs. TAIR 10
Match: AT3G17611.3 (RHOMBOID-like protein 14 )

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-41
Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 277 MKVVLGSQAESYTYLHGIRVPSSHAAWLELILIQMVSPGASFLGHLGGILAGLLFLRLKC 336
           MKVVL SQAE Y+ ++GI VP+ +AAW ELIL+QM  P ASFLGHLGGILAG+++L+LK 
Sbjct: 1   MKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKG 60

Query: 337 TNSGSDPLTLLIRSVGRILSRPLGILYRLNPFRQCRIFGGGMVGRRQTALERTTSIDTWR 396
           + SGSDP+T+ +R V R+++ PL  L  +   R+ RI G G VGR QT +        WR
Sbjct: 61  SYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGI---AGPGIWR 120

Query: 397 CQACTFDNSGLLSICEMCGTDRQD----RVLPSHQLSHHFDLSREEVRHRRLERF 448
           CQ+CT+DNSG LS CEMCG+ R       +     LS   DL  +E+R RR+ERF
Sbjct: 121 CQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 172

[Close]

BLAST of ClCG04G002200 vs. TAIR 10
Match: AT3G58460.1 (RHOMBOID-like protein 15 )

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-10
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 193 RFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMVGALLVMSQGITLMLIKSL 252
           RF  +  +H    H++FNM++L+  G +LE  MGS+    +   LL  +  +  +LI SL
Sbjct: 66  RFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLT-VLLATTNAVLHLLIASL 125

Query: 253 L---VFFNYERPYFYEYSVGFSGVLFAMKVVLGSQA--ESYTYLHGIRVPSSHAAWLELI 312
                F+ Y+     E ++GFSG+LF+M V+  S +   S +      VP+    W+ LI
Sbjct: 126 AGYNPFYQYDH-LMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLI 185

Query: 313 LIQMVSPGASFLGHLGGILAGLLF 332
           + Q++    S LGHL GIL+G  +
Sbjct: 186 VFQLLMTNVSLLGHLCGILSGFSY 207

[Close]

BLAST of ClCG04G002200 vs. TAIR 10
Match: AT3G58460.2 (RHOMBOID-like protein 15 )

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-10
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 193 RFLLSPFYHVGDPHLVFNMISLLWKGIQLETSMGSIEFASMVGALLVMSQGITLMLIKSL 252
           RF  +  +H    H++FNM++L+  G +LE  MGS+    +   LL  +  +  +LI SL
Sbjct: 89  RFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLT-VLLATTNAVLHLLIASL 148

Query: 253 L---VFFNYERPYFYEYSVGFSGVLFAMKVVLGSQA--ESYTYLHGIRVPSSHAAWLELI 312
                F+ Y+     E ++GFSG+LF+M V+  S +   S +      VP+    W+ LI
Sbjct: 149 AGYNPFYQYDH-LMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLI 208

Query: 313 LIQMVSPGASFLGHLGGILAGLLF 332
           + Q++    S LGHL GIL+G  +
Sbjct: 209 VFQLLMTNVSLLGHLCGILSGFSY 230

The following BLAST results are available for this feature:

BLAST of ClCG04G002200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881196.1	3.0e-139	78.20	rhomboid-like protein 14, mitochondrial [Benincasa hispida]	[more]
XP_008442110.1	2.4e-136	75.29	PREDICTED: rhomboid-like protein 14, mitochondrial [Cucumis melo] >KAA0034920.1 ...	[more]
XP_004146389.1	6.5e-134	74.42	rhomboid-like protein 14, mitochondrial [Cucumis sativus] >XP_011653901.1 rhombo...	[more]
XP_022152348.1	3.0e-131	71.55	rhomboid-like protein 14, mitochondrial [Momordica charantia] >XP_022152349.1 rh...	[more]
XP_022967849.1	8.8e-131	72.38	rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967850.1 rhomb...	[more]

BLAST of ClCG04G002200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXW0	5.4e-91	54.52	Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14...	[more]
Q8TEB9	3.4e-24	42.41	Rhomboid-related protein 4 OS=Homo sapiens OX=9606 GN=RHBDD1 PE=1 SV=1	[more]
Q8BHC7	7.0e-22	37.97	Rhomboid-related protein 4 OS=Mus musculus OX=10090 GN=Rhbdd1 PE=1 SV=1	[more]
Q5RBS4	7.0e-22	39.87	Rhomboid-related protein 4 OS=Pongo abelii OX=9601 GN=RHBDD1 PE=2 SV=1	[more]
Q4V8F3	1.7e-20	37.34	Rhomboid-related protein 4 OS=Rattus norvegicus OX=10116 GN=Rhbdd1 PE=2 SV=1	[more]

BLAST of ClCG04G002200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVC3	1.2e-136	75.29	Rhomboid-like protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B4I1	1.2e-136	75.29	rhomboid-like protein 14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486069 ...	[more]
A0A0A0L173	3.2e-134	74.42	RanBP2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G506850...	[more]
A0A6J1DFR9	1.5e-131	71.55	rhomboid-like protein 14, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1HXX5	4.3e-131	72.38	rhomboid-like protein 14, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]

BLAST of ClCG04G002200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17611.1	3.9e-92	54.52	RHOMBOID-like protein 14	[more]
AT3G17611.2	2.3e-68	57.68	RHOMBOID-like protein 14	[more]
AT3G17611.3	1.4e-41	52.00	RHOMBOID-like protein 14	[more]
AT3G58460.1	1.7e-10	33.33	RHOMBOID-like protein 15	[more]
AT3G58460.2	1.7e-10	33.33	RHOMBOID-like protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 393..417 e-value: 0.001 score: 28.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 395..414
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 391..420 score: 8.174064
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 117..334 e-value: 4.9E-20 score: 74.1
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 119..333
None	No IPR available	GENE3D	2.30.30.380		coord: 389..445 e-value: 1.7E-7 score: 32.9
None	No IPR available	PANTHER	PTHR43066:SF1	RHOMBOID PROTEIN 2	coord: 178..446
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 114..161
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 178..446
None	No IPR available	PANTHER	PTHR43066:SF1	RHOMBOID PROTEIN 2	coord: 114..161
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 190..334 e-value: 1.4E-19 score: 70.6
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 393..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G002200.2	ClCG04G002200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity