ClCG04G001895 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G001895
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Plant self-incompatibility protein S1 family
Location	CG_Chr04: 6526081 .. 6526494 (-)
RNA-Seq Expression	ClCG04G001895
Synteny	ClCG04G001895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCATCCTTAGCACTTATATTCTTGGTTTTACAAATATTGTTCATCGGCATGCATGCTGCTGAAGAATCAATCTCACTTTTGCCAGAAACAACAGTGACCACTATTAATAAATTGGCTGGCCCAGTGCTAAACGTTCATTGTAGATCAAAAGACGATGACTTGGGAGTCCATATCATAGAGTTTGAACGCAGCTACTCCTTTAGCTTTAGACCTAATGTTTGGGGCACAACGCAATTTTCTTGCAGCTTTCAATGGGTCCAAGGCGAGATCCACAACTTCTCAATCTACAATTTTCACAGAGATGCAAATCGTTGCACTGACTGCATTTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAATATGTGCTTCCCTTGGAACTAG

mRNA sequence

ATGAATTCATCCTTAGCACTTATATTCTTGGTTTTACAAATATTGTTCATCGGCATGCATGCTGCTGAAGAATCAATCTCACTTTTGCCAGAAACAACAGTGACCACTATTAATAAATTGGCTGGCCCAGTGCTAAACGTTCATTGTAGATCAAAAGACGATGACTTGGGAGTCCATATCATAGAGTTTGAACGCAGCTACTCCTTTAGCTTTAGACCTAATGTTTGGGGCACAACGCAATTTTCTTGCAGCTTTCAATGGGTCCAAGGCGAGATCCACAACTTCTCAATCTACAATTTTCACAGAGATGCAAATCGTTGCACTGACTGCATTTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAATATGTGCTTCCCTTGGAACTAG

Coding sequence (CDS)

ATGAATTCATCCTTAGCACTTATATTCTTGGTTTTACAAATATTGTTCATCGGCATGCATGCTGCTGAAGAATCAATCTCACTTTTGCCAGAAACAACAGTGACCACTATTAATAAATTGGCTGGCCCAGTGCTAAACGTTCATTGTAGATCAAAAGACGATGACTTGGGAGTCCATATCATAGAGTTTGAACGCAGCTACTCCTTTAGCTTTAGACCTAATGTTTGGGGCACAACGCAATTTTCTTGCAGCTTTCAATGGGTCCAAGGCGAGATCCACAACTTCTCAATCTACAATTTTCACAGAGATGCAAATCGTTGCACTGACTGCATTTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAATATGTGCTTCCCTTGGAACTAG

Protein sequence

MNSSLALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMCFPWN

Homology

[Close]

BLAST of ClCG04G001895 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 9.8e-41
Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MNSSLALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHI 60
           M SSLAL F +  +L I +HA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  IEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPC 120
           +  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LMHPKDTGTYNMCFPWN 138
           L H + + T   CFPWN
Sbjct: 121 LQHSETSIT---CFPWN 134

[Close]

BLAST of ClCG04G001895 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 7.0e-39
Identity = 74/133 (55.64%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFE 64
           +AL F +  +L I +HA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  +
Sbjct: 75  IALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSD 134

Query: 65  RSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHP 124
           +SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H 
Sbjct: 135 KSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHS 194

Query: 125 KDTGTYNMCFPWN 138
           + + T   CFPWN
Sbjct: 195 ETSIT---CFPWN 204

[Close]

BLAST of ClCG04G001895 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-36
Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 14  ILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRP 73
           +L I + A +E ISLLPETTV  +N++ GP+L +HCRSK DDLGV+++  ++SYSF+F P
Sbjct: 4   LLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFNFGP 63

Query: 74  NVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMC 133
           N+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W IY  GPCL H K + T   C
Sbjct: 64  NIWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLIYASGPCLQHSKTSVT---C 123

Query: 134 FPWN 138
           FPWN
Sbjct: 124 FPWN 124

[Close]

BLAST of ClCG04G001895 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 4.3e-36
Identity = 66/114 (57.89%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 24  ESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSC 83
           E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPN+WGTT F C
Sbjct: 71  ELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLFYC 130

Query: 84  SFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMCFPWN 138
            F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 131 VFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 181

[Close]

BLAST of ClCG04G001895 vs. NCBI nr
Match: EXB68036.1 (hypothetical protein L484_009643 [Morus notabilis])

HSP 1 Score: 121.7 bits (304), Expect = 4.9e-24
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 8   IFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSY 67
           + +V  ++F+ +  +E S  LL +T V   N L    L VHC+SK+DDLG H++    SY
Sbjct: 12  LVVVFSLVFLSI-VSETSQGLLSKTHVKMTNNLGDVDLTVHCKSKNDDLGDHLLHLNESY 71

Query: 68  SFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANRCTDCIWEIYRDGPCLMHPKD 127
            FSFR N WGTT F CSF+W   +   F I++  +  A+ CT+C W ++ +G C M P +
Sbjct: 72  EFSFRTNFWGTTHFYCSFKWAPDQFQWFDIFDMEKPRADSCTECFWVVHINGLCRMDP-N 131

Query: 128 TGTYNMCFPWN 138
            G YN+CFPWN
Sbjct: 132 NGLYNICFPWN 140

[Close]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.2e-26
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 32  TTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGE 91
           T VT  N + GP L +HC+SK DDLG+H++ F++ Y F F+PN+W +T F CSFQW   +
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQW-DSQ 88

Query: 92  IHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMCFPW 137
             +F IY+  RD   C DC WEI  DGPC +     G    CFPW
Sbjct: 89  FKSFDIYDAQRDQGICDDCQWEIKPDGPCRL-----GKKAKCFPW 127

[Close]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18
Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 21  AAEESISLLPETTVTTINKLAGPV-LNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTT 80
           ++  S+    + TV   N L   + L  HC+SKDDDLG   ++   S+SFSF    +G T
Sbjct: 37  SSTNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRT 96

Query: 81  QFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CIWEIYRDGPCLMHPKDTGTYNMCF 138
            + CSF W   E H+F IY  HRD+   N+C    C+W+I R+GPC  +  +T  +++C+
Sbjct: 97  LYFCSFSW-PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCY 156

[Close]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLA-GPVLNVHCRSKDDDLGVHIIEF 64
           + +I+L+++I F      +  ++      V   N+L  G  LN+HC+S DDDLG+ I+  
Sbjct: 11  VVVIYLLIKIAF-SQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAP 70

Query: 65  ERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR----CTDCIWEIYRDGP 124
             S+SF FR ++ GTT F C F W  G+   F IY+  RD  R    C +CIW+I   GP
Sbjct: 71  NGSWSFKFRTSIVGTTLFYCHFTW-PGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGP 130

Query: 125 CLMHPKDTGTYNMCFPWN 138
           C+    D   +N+C+ WN
Sbjct: 131 CMFSESD-HAFNICYDWN 145

[Close]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-17
Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLA-GPVLNVHCRSKDDDLGVHIIEF 64
           + +I+L++QI F  +    +      ++ VT  N+L  G  L +HC+S DDDLG+ I+  
Sbjct: 11  VVVIYLLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAP 70

Query: 65  ERSYSFSFRPN-VWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR----CTDCIWEIYRDG 124
             S+SF FRP+ V G T F C F W  G+   F+IY+  RD  R    C  CIW+I + G
Sbjct: 71  NGSWSFKFRPSIVPGVTLFFCHFTW-PGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYG 130

Query: 125 PCLMHPKDTGTYNMCFPWN 138
           PC     D   +N+C+ WN
Sbjct: 131 PCRFSEID-DAFNICYDWN 147

[Close]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-16
Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 8   IFLVLQILFIGMHAAEESISLLPETTVTTINKLA-GPVLNVHCRSKDDDLGVHIIEFERS 67
           IF+VL I+   + ++    +   +T VT  N ++    L + CRSKDDDLG H++   ++
Sbjct: 7   IFVVLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQA 66

Query: 68  YSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKD 127
           + + FRP+ + TT F+C F W    +  F  Y   RD   C  C W I  D  C+     
Sbjct: 67  FLWKFRPSWFRTTLFTCKFLW-NNNVKWFDTYRSDRDQGHCYSCNWSINADSACI----- 126

Query: 128 TGTYN----MCFPWN 138
           +G +N     C+PWN
Sbjct: 127 SGNFNKKFDRCYPWN 135

[Close]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.8e-41
Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MNSSLALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHI 60
           M SSLAL F +  +L I +HA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  IEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPC 120
           +  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LMHPKDTGTYNMCFPWN 138
           L H + + T   CFPWN
Sbjct: 121 LQHSETSIT---CFPWN 134

[Close]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 74/133 (55.64%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFE 64
           +AL F +  +L I +HA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  +
Sbjct: 75  IALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSD 134

Query: 65  RSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHP 124
           +SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H 
Sbjct: 135 KSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHS 194

Query: 125 KDTGTYNMCFPWN 138
           + + T   CFPWN
Sbjct: 195 ETSIT---CFPWN 204

[Close]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.3e-37
Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 14  ILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRP 73
           +L I + A +E ISLLPETTV  +N++ GP+L +HCRSK DDLGV+++  ++SYSF+F P
Sbjct: 4   LLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFNFGP 63

Query: 74  NVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMC 133
           N+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W IY  GPCL H K + T   C
Sbjct: 64  NIWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLIYASGPCLQHSKTSVT---C 123

Query: 134 FPWN 138
           FPWN
Sbjct: 124 FPWN 124

[Close]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.1e-36
Identity = 66/114 (57.89%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 24  ESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSC 83
           E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPN+WGTT F C
Sbjct: 71  ELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLFYC 130

Query: 84  SFQWVQGEIHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMCFPWN 138
            F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 131 VFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 181

[Close]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL
Match: W9RF60 (S-protein homolog OS=Morus notabilis OX=981085 GN=L484_009643 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 8   IFLVLQILFIGMHAAEESISLLPETTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSY 67
           + +V  ++F+ +  +E S  LL +T V   N L    L VHC+SK+DDLG H++    SY
Sbjct: 12  LVVVFSLVFLSI-VSETSQGLLSKTHVKMTNNLGDVDLTVHCKSKNDDLGDHLLHLNESY 71

Query: 68  SFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANRCTDCIWEIYRDGPCLMHPKD 127
            FSFR N WGTT F CSF+W   +   F I++  +  A+ CT+C W ++ +G C M P +
Sbjct: 72  EFSFRTNFWGTTHFYCSFKWAPDQFQWFDIFDMEKPRADSCTECFWVVHINGLCRMDP-N 131

Query: 128 TGTYNMCFPWN 138
            G YN+CFPWN
Sbjct: 132 NGLYNICFPWN 140

[Close]

BLAST of ClCG04G001895 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-27
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 32  TTVTTINKLAGPVLNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGE 91
           T VT  N + GP L +HC+SK DDLG+H++ F++ Y F F+PN+W +T F CSFQW   +
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQW-DSQ 88

Query: 92  IHNFSIYNFHRDANRCTDCIWEIYRDGPCLMHPKDTGTYNMCFPW 137
             +F IY+  RD   C DC WEI  DGPC +     G    CFPW
Sbjct: 89  FKSFDIYDAQRDQGICDDCQWEIKPDGPCRL-----GKKAKCFPW 127

[Close]

BLAST of ClCG04G001895 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 30  PETTVTTINKLAGPV-LNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWV 89
           P TTV   N L G + L  HC+SK+DDLG   +    ++SF FRP+V+G T F C F W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  QGEIHNFSIYNFHRDAN----RCTDCIWEIYRDGPCLMHPKDTGTYNMCFPWN 138
             E+H F IY   RD       C  C W+I +DGPC ++ K++  +++C PWN
Sbjct: 86  DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVCLPWN 136

[Close]

BLAST of ClCG04G001895 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 21  AAEESISLLPETTVTTINKLAGPV-LNVHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTT 80
           ++  S+    + TV   N L   + L  HC+SKDDDLG   ++   S+SFSF    +G T
Sbjct: 37  SSTNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRT 96

Query: 81  QFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CIWEIYRDGPCLMHPKDTGTYNMCF 138
            + CSF W   E H+F IY  HRD+   N+C    C+W+I R+GPC  +  +T  +++C+
Sbjct: 97  LYFCSFSW-PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCY 156

[Close]

BLAST of ClCG04G001895 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLA-GPVLNVHCRSKDDDLGVHIIEF 64
           + +I+L+++I F      +  ++      V   N+L  G  LN+HC+S DDDLG+ I+  
Sbjct: 11  VVVIYLLIKIAF-SQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAP 70

Query: 65  ERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR----CTDCIWEIYRDGP 124
             S+SF FR ++ GTT F C F W  G+   F IY+  RD  R    C +CIW+I   GP
Sbjct: 71  NGSWSFKFRTSIVGTTLFYCHFTW-PGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGP 130

Query: 125 CLMHPKDTGTYNMCFPWN 138
           C+    D   +N+C+ WN
Sbjct: 131 CMFSESD-HAFNICYDWN 145

[Close]

BLAST of ClCG04G001895 vs. TAIR 10
Match: AT1G26799.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 5   LALIFLVLQILFIGMHAAEESISLLPETTVTTINKLAG-PVLNVHCRSKDDDLGVHIIEF 64
           L+ +F++ ++  +G H++ + I L     V   N L     L VHC +K+ DLG+  +  
Sbjct: 14  LSFLFILKKLSSLGNHSSNDGILLFSPKHVVIYNTLTSRATLVVHCVNKEKDLGIQKLPI 73

Query: 65  ERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR------CTDCIWEIYRD 124
             S+ F FR N+  TT ++C+F+W  G I  F I+   RD N       C +CIW IY  
Sbjct: 74  GASFDFRFRVNLRKTTTYNCTFEW-PGSIEKFDIFRADRDDNETSPIGICRECIWYIYEP 133

Query: 125 GPCLMHPKDTGTYNMCFPWN 138
            PC    K  G +++CF W+
Sbjct: 134 APC--REKRDGGHSICFTWD 150

The following BLAST results are available for this feature:

BLAST of ClCG04G001895 vs. NCBI nr


Match Name	E-value	Identity	Description
ABY56091.1	9.8e-41	56.93	self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p...	[more]
ABY56092.1	7.0e-39	55.64	self-incompatibility protein 2 [Cucumis melo]	[more]
KAA0046095.1	1.9e-36	55.65	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0046284.1	4.3e-36	57.89	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
EXB68036.1	4.9e-24	42.75	hypothetical protein L484_009643 [Morus notabilis]	[more]

BLAST of ClCG04G001895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	4.2e-26	47.62	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JLQ5	1.9e-18	39.02	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	1.9e-18	36.96	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	4.6e-17	38.13	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	8.7e-16	33.33	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of ClCG04G001895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B0F817	4.8e-41	56.93	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
B0F818	3.4e-39	55.64	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
A0A5A7TXE8	9.3e-37	55.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00...	[more]
A0A5A7TT98	2.1e-36	57.89	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00...	[more]
W9RF60	2.4e-24	42.75	S-protein homolog OS=Morus notabilis OX=981085 GN=L484_009643 PE=3 SV=1	[more]

BLAST of ClCG04G001895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	3.0e-27	47.62	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.6e-20	42.48	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.3e-19	39.02	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	1.3e-19	36.96	Plant self-incompatibility protein S1 family	[more]
AT1G26799.1	2.5e-18	33.57	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..136 e-value: 8.4E-29 score: 100.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 10..121
None	No IPR available	PANTHER	PTHR31232:SF53	S-PROTEIN HOMOLOG 29-RELATED	coord: 10..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G001895.1	ClCG04G001895.1	mRNA