ClCG04G000250 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G000250
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Nuclear transcription factor Y subunit
Location	CG_Chr04: 980657 .. 984988 (+)
RNA-Seq Expression	ClCG04G000250
Synteny	ClCG04G000250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACTGATAATTCTCAACCATGGAGGTACTGGCACGGCGGCGCCACCACTATTGCCGACATGTCGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGCTTCGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATCACTCTTTCTCCACCTCGAGGTAGGGTGTAAGTATTGGTTAAAATTACATTTTCATCCCTCGATTGTTCAATTATAGTCCATCCATGCATTTTTAGATATCAAATTTTAGTATTTGTATTTTCTATAGATCATAAATTTAGTTCATACTAGTTTATCAGTGATTTTTTTAATCTTATCTATGGGCTTTCTACTATAAATTTTGAGAATATATTGTATTTCATTTATTAAAAATTTTATTATTTAACACATTTTTACTAGAAAAAATTAACTTCGACGACTGAATTTGTGATATTTTGAAGTACAATGATAAAATTAAACACTTGAAAACATAGGACTAAATTTGAAGAAACTTCAAAGTATAAAGACTGAAATGATGTATATATTTTTTAGCTCGACTGTAATAGTAAACAAAAATTAAAAAACTATCATTAGCATATTTCTTGATTTTTTTTTTTTTTTTAGTTTTTAAATCCACCATCAAGAAAAGTATATAGATGACACATGAAAGACTAATCATTATTGATCATTTCATAAAATTTTAATTTAGTCAACAATAATCATTTTATTGACATTAATTAACTATCATGGTTAAATTTTTTATAACAATTTATTATGGTTAATAAATGATAAATCTTTTTTTTTTTTTTCAATTAAACCATTTACATGGTTGATTTATTGATGATTTCATTAAGTATATACTCTTTCCTAATCATATTTTACAAAATTCAATATTTGTTACCTATGTATTTATTTATTTTTTAAAATGTCTACTATAAAGTTAATACTATTGAAAGTGTGAATAAGGGAGTGTGAGAATTGGAGACCTTATCTTTCATAAATTTATTAAGTGATTTTCATGATACACGTGCATGAATCTATAAATTTTATACACATTGATTAATAATTTTCATCTATGTTATTGAGTTTTGTAAGAAAAGAAATTTAGTATTTATTCAAAATTGTAAAATCTAGGGTAAAGTATTCTTTGGCATTCATATGCATTTCCAGCATTACCTGGCAAAAAAATTATTTTTTATTAGCTACCATTTTTTTTTATTTGGTTTAATATATCCTATTTTGACGTGTTCAATCATACACTAATATAAAATAGATTAAAAAACTATATATATTGGTGGGACTTTGAAACTTGTTATATTTTACTTCATATGGTTTTATTTAAATGTCTAAATTTAGTTAATGTATTTTTAATAAGTGTCTTTAAAGTTTGTTCGAATGTTAGTTTAATATTGCTTAACAAAAAAATCTAGTGTATGTAGCTCTTTCTCTGTAAAATTTGAAAATATATTTGTATTGTCTCCTTTTGTAAATAGCAATAAATATTATTATTTTTTTCAAGTTCGATGAAAAGTATATTTAAACTAATGGTAAAGACTAATTTTAAGATTTATTCAAAGTATGAGACTATTTTAAAGTACATGACTAAAATAAAATGTGTTTTATGAAAACAAAAACAAAATTTTGACCATAAAAATATATGCATTGTTGTCGGAAAACATGTAATTATTTTTAGAGAAAAATGCTCTTTTGGCTCTAGGATTTGAGTCTAGTTTCCATTTGATCTATGAGTTTCAAAATTTTAAGTTTTGAGTTTGGATTCAATTTAGTTCTTTGGCTTCAAAATATTACACTTTTAATCTTCAAGTTTTGAGTTTTATTTTAATGTAGTCGCTATGGAATATACGACGATGATTTTGATTACAACACGCTTTTGAAGGAACCCAAGGTGGATAGATTGTTAAGAGTGTGAGCAAACAAAATTGTATATCGATGTGAACAATAATATACAATTACAAAAGTTTAGAAAGGTCCATTCTCCATCTAAAAACAAAAGGTTGACAAGTTACAACTAACATCCCACAATTCAAATATTGAGATTTAAAAAATAAACCCACCTAATAGAAACTCATTGTACTTGATTTAGTAAATTTGGAAACAAGAAATTGACTCTTTCATCTTTCAACAAAACATACCCTTAAATGTAAATGTTGTTAGGGTTGTGTTGATGATGGCAGGTAGAATGTTCCAAAGTATTGAATCCAAAGGTAATGTTATTAAGAATGATAAGTTTTGGACATGAGCAGGTGGAGAATCAACACTACAACATAAGAGTAGAGATGCATCCATTGATCTTCCTTTGATGAATAATGAACATTATGATGGATCTACTTCCCAATCACAGCTTGTTACCCTTTCAATGGTTCTTTCTCTCTCTAGATCTCTCTCCCTCTCTTCATATTGAAACTGATCATTTCTATTATTTCTAACAGACAACGGGTACATCGTACGTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGGTATGAATACGAGATATTTATAGGCTTAATGTTAAAAAACCAAAAATCAAAAACAAAATGGTTACCAAAGAGGGCCTTAATTTTTTGTTTTTAGTTTTTGAAAACTAAGATTTGGTTTTATAATCATTTGGGTTTTTTATATTTTAAAACTAAACTTACAAACATATTGATTTCTTTATTTTGTTATATACTTTTTCATAAGTGTTTTTAAAAAAACAAAACTAACACCCCGTTCGACAACCTTTTTTTTTTTTTTATTATTTTTAGTTTTTGAAAATTTAGCCTATGAATATCATTTTCACCTTGTCATCTACTTTTGTTTTTGTTTTTGAAATTTAGCTAAGAATTTAACTCTTTTACTTAAAAAGAAAAAAAATTATTTAGCTAACAAATGGAAACTAAATAAACTAGTTTTTGTTTTTTAAATTTGGTTAAGAATTAAGATGTTTAGTTATAAAATCTGAAAACCATGATAAATAAATAATGAGAACAAACCATCATTTAAAAAGAAAAGAATGGGTTACCAAACGAAGCGGCGTGTAAGGTTTTAAACACTACTACTTCCACTATCTATTAATTTCCTTGTATTCTGTTATTAATTTTCTAAGAAATGTTTTTAATATATATCCATGGTTATTAAATATCTGTTTTGTTAGAGCTTTGTTAAAAATTCAAACCTTAGCGATGACGATGACCATAGTAAAAAAATTATTAGAGAATAACGACAAATTTCAAATTTCAAACCATGCAATAAACAAATAATTATCAAATGACACTTCAATTATTCACTCTACAATAACTAAGTCTTATTAATCTGGCTAATGGCTCGTATTTAATTTCCTATATTGAGAAATTCATTCCTTAAGGTGTTTGATTCAACGAGTAGAGTTGGAGGAGCGAACTCTTTTTTCTTGATTGAAGCAATTTGTGATTTTTCGTTAAAAAACATCATATTTATATTTGATTAACTTCTTACATTATTGATCCCACAACTTCACAACTTTCTTGACTTCACAATTACCCTTTACTCCAAAAACACCTCCAATTTATTTATTTTTTTGAACACCACGAAATCTTTTTTTTTTTTAAATGGAATTTGATATTTTGATGTTATTTGTTTTTTCATTTATTTCTGTTTCAACTTTTTTTTTCTTTTTTTGGTTCTATATGGCAATAGAAGGGGAAGTCAGAAGAAAAGAACTCGATTATATAGCTTTACTATGGTTTTATAGAGGTCATTTGTTAGCTAAAGGTTGGTTGTTACTCAGCATAATTCAGAATACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTTGAAAATAGAATATCCAGATCACAGAGGAAGGTAACTGAACATGACCAGCTATATATATGTGTGTGTGTGTCTAACACTTATTAGCTTAAGCTTTCTTCGAGAACCAATGTGTGCGTGTATCGCAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACTATCAAGCTTCCCAACTACATTTATCTGCATATATATGA

mRNA sequence

ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACTGATAATTCTCAACCATGGAGGTACTGGCACGGCGGCGCCACCACTATTGCCGACATGTCGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGCTTCGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATCACTCTTTCTCCACCTCGAGGTGGAGAATCAACACTACAACATAAGAGTAGAGATGCATCCATTGATCTTCCTTTGATGAATAATGAACATTATGATGGATCTACTTCCCAATCACAGCTTGTTACCCTTTCAATGACAACGGGTACATCGTACGTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAATACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTTGAAAATAGAATATCCAGATCACAGAGGAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACTATCAAGCTTCCCAACTACATTTATCTGCATATATATGA

Coding sequence (CDS)

ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACTGATAATTCTCAACCATGGAGGTACTGGCACGGCGGCGCCACCACTATTGCCGACATGTCGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGCTTCGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATCACTCTTTCTCCACCTCGAGGTGGAGAATCAACACTACAACATAAGAGTAGAGATGCATCCATTGATCTTCCTTTGATGAATAATGAACATTATGATGGATCTACTTCCCAATCACAGCTTGTTACCCTTTCAATGACAACGGGTACATCGTACGTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAATACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTTGAAAATAGAATATCCAGATCACAGAGGAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACTATCAAGCTTCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

Homology

[Close]

BLAST of ClCG04G000250 vs. NCBI nr
Match: XP_008460780.1 (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 9.8e-101
Identity = 210/272 (77.21%), Postives = 225/272 (82.72%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDS 60
           MMS EI+  NR DCDNQQITNY T+NSQP +  HGG +T A+MSKEEK  WAW KG VDS
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL-HGGNSTTANMSKEEKRNWAWPKGLVDS 60

Query: 61  GPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTT 120
            P P+T+ K M+ITLS   G ESTL +KSRD S  LPLMNNEHY  STSQ +L+TLSMTT
Sbjct: 61  EPVPRTSHKEMRITLS---GVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTT 120

Query: 121 GTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY YH PSYGGL S F FQTMHNS+Y S MAQ RMALPLAMAEEPVYVNAKQYHGILR
Sbjct: 121 DTSYTYHDPSYGGLPSPFEFQTMHNSDY-SRMAQARMALPLAMAEEPVYVNAKQYHGILR 180

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDD 240
           RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD
Sbjct: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDD 240

Query: 241 VEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            EGSNIS LGSESMCNGS+ YQ SQLHLSAYI
Sbjct: 241 GEGSNIS-LGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of ClCG04G000250 vs. NCBI nr
Match: XP_031739714.1 (nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 2.5e-96
Identity = 199/274 (72.63%), Postives = 215/274 (78.47%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGF 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 61  VDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLS 120
           VDS P  KT+TK + ITLS   G   TL +KSRD S  LP MNNEHY  STSQS+L++LS
Sbjct: 61  VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 120

Query: 121 MTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHG 180
           MT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHG
Sbjct: 121 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHG 180

Query: 181 ILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDD 240
           ILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DD
Sbjct: 181 ILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDD 240

Query: 241 DDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
           DD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Sbjct: 241 DDGEGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 264

[Close]

BLAST of ClCG04G000250 vs. NCBI nr
Match: XP_004150466.2 (nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 2.5e-96
Identity = 199/274 (72.63%), Postives = 215/274 (78.47%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGF 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLS 120
           VDS P  KT+TK + ITLS   G   TL +KSRD S  LP MNNEHY  STSQS+L++LS
Sbjct: 141 VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 200

Query: 121 MTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHG 180
           MT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHG
Sbjct: 201 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHG 260

Query: 181 ILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDD 240
           ILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DD
Sbjct: 261 ILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDD 320

Query: 241 DDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
           DD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Sbjct: 321 DDGEGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of ClCG04G000250 vs. NCBI nr
Match: XP_022151660.1 (nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia])

HSP 1 Score: 335.1 bits (858), Expect = 5.6e-88
Identity = 196/283 (69.26%), Postives = 216/283 (76.33%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAY 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ 
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSW-WWHGGGHGGATTTTTTTMSKEDESN 67

Query: 61  WAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKSRDASIDLPLMNNEHYDGSTS 120
           WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KSRDASI LPLMNNEH   STS
Sbjct: 68  WAWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTS 127

Query: 121 QSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPV 180
            S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPV
Sbjct: 128 HSELVTLPM-TATSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPV 187

Query: 181 YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKK 240
           YVNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK
Sbjct: 188 YVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK 247

Query: 241 AETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Sbjct: 248 VESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of ClCG04G000250 vs. NCBI nr
Match: XP_022151661.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia])

HSP 1 Score: 335.1 bits (858), Expect = 5.6e-88
Identity = 196/283 (69.26%), Postives = 216/283 (76.33%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAY 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ 
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSW-WWHGGGHGGATTTTTTTMSKEDESN 60

Query: 61  WAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKSRDASIDLPLMNNEHYDGSTS 120
           WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KSRDASI LPLMNNEH   STS
Sbjct: 61  WAWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTS 120

Query: 121 QSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPV 180
            S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPV
Sbjct: 121 HSELVTLPM-TATSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPV 180

Query: 181 YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKK 240
           YVNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK
Sbjct: 181 YVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK 240

Query: 241 AETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Sbjct: 241 VESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 276

[Close]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-25
Identity = 87/215 (40.47%), Postives = 106/215 (49.30%), Query Frame = 0


Query: 33  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-S 92
           WH  A            D S +  A    S G      R  T  K  Q+T SP   G+ S
Sbjct: 35  WHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYS 94

Query: 93  TLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTM 152
               +S    I  P              QLV  ++   +S  Y  P Y G+M A+G   +
Sbjct: 95  DKNQESLHHGITQP----------PPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPL 154

Query: 153 HNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYL 212
               Y   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYL
Sbjct: 155 GFVPYGG-MPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKS-RKPYL 214

Query: 213 HESRHLHAMRRERGCGGRFVSK------KKKAETR 233
           HESRH HAMRR RG GGRF  K      K+KAE +
Sbjct: 215 HESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEK 237

[Close]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-25
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 126 YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 185
           Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 186 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 245
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 246 STLGSESM 254
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

[Close]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 73/177 (41.24%), Postives = 100/177 (56.50%), Query Frame = 0


Query: 86  QHKSRDASIDLPLMNNEHYDG---STSQSQLVTLSMTTGTSYVYHHPSYGGLMS--AFGF 145
           + + RD+    P+ +  +Y+    S   S   T +      Y Y  P Y  + +     +
Sbjct: 17  KQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPPPQPY 76

Query: 146 QTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK 205
             +H  +   +  QG + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++ +S RK
Sbjct: 77  TGVH-LQLMGVQQQG-VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKS-RK 136

Query: 206 PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS 258
           PYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E SN+S  G  +M   S
Sbjct: 137 PYLHESRHLHAIRRPRGCGGRFLNAKKEDEHH--EDSSHEEKSNLSA-GKSAMAASS 187

[Close]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-20
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 123 SYVYHHPSYGGLMSAFGFQTMHNSEYNSI-MAQGRMALPLAMAE-EPVYVNAKQYHGILR 182
           S+ Y  P YGGL++A             + M  GR+ LP  + E +PV+VNAKQYH I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193

Query: 183 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK 228
           RRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG GGRF++ KK
Sbjct: 194 RRQQRAKLEAQNKLIRA-RKPYLHESRHVHALKRPRGSGGRFLNTKK 239

[Close]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-20
Identity = 71/161 (44.10%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 117 SMTTGTSYVYHHPSYGGL--------MSAFGFQTMHNSEYNSI------MAQGRMALPLA 176
           S +  T+ VY  P   GL         S F  Q      Y  +      M Q  + L   
Sbjct: 35  SESIDTNSVYSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCD 94

Query: 177 MAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF 236
             EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA+RR RGCGGRF
Sbjct: 95  AVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKA-KKPYMHESRHLHAIRRPRGCGGRF 154

Query: 237 VSKKK-----KAETRVSMDDDDVEGSNISTLGSESMCNGSS 259
           ++ KK     K E   + D++  E S  S+L SE +   +S
Sbjct: 155 LNAKKENGDHKEEEEATSDENTSEAS--SSLRSEKLAMATS 192

[Close]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL
Match: A0A1S3CEE5 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.7e-101
Identity = 210/272 (77.21%), Postives = 225/272 (82.72%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDS 60
           MMS EI+  NR DCDNQQITNY T+NSQP +  HGG +T A+MSKEEK  WAW KG VDS
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL-HGGNSTTANMSKEEKRNWAWPKGLVDS 60

Query: 61  GPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTT 120
            P P+T+ K M+ITLS   G ESTL +KSRD S  LPLMNNEHY  STSQ +L+TLSMTT
Sbjct: 61  EPVPRTSHKEMRITLS---GVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTT 120

Query: 121 GTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY YH PSYGGL S F FQTMHNS+Y S MAQ RMALPLAMAEEPVYVNAKQYHGILR
Sbjct: 121 DTSYTYHDPSYGGLPSPFEFQTMHNSDY-SRMAQARMALPLAMAEEPVYVNAKQYHGILR 180

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDD 240
           RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD
Sbjct: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDD 240

Query: 241 VEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            EGSNIS LGSESMCNGS+ YQ SQLHLSAYI
Sbjct: 241 GEGSNIS-LGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL
Match: A0A0A0KWA0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G159320 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96
Identity = 199/274 (72.63%), Postives = 215/274 (78.47%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGF 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLS 120
           VDS P  KT+TK + ITLS   G   TL +KSRD S  LP MNNEHY  STSQS+L++LS
Sbjct: 141 VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 200

Query: 121 MTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHG 180
           MT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHG
Sbjct: 201 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHG 260

Query: 181 ILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDD 240
           ILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DD
Sbjct: 261 ILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDD 320

Query: 241 DDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
           DD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Sbjct: 321 DDGEGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL
Match: A0A6J1DFC4 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88
Identity = 196/283 (69.26%), Postives = 216/283 (76.33%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAY 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ 
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSW-WWHGGGHGGATTTTTTTMSKEDESN 60

Query: 61  WAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKSRDASIDLPLMNNEHYDGSTS 120
           WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KSRDASI LPLMNNEH   STS
Sbjct: 61  WAWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTS 120

Query: 121 QSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPV 180
            S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPV
Sbjct: 121 HSELVTLPM-TATSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPV 180

Query: 181 YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKK 240
           YVNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK
Sbjct: 181 YVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK 240

Query: 241 AETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Sbjct: 241 VESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 276

[Close]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL
Match: A0A6J1DBT5 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88
Identity = 196/283 (69.26%), Postives = 216/283 (76.33%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAY 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ 
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSW-WWHGGGHGGATTTTTTTMSKEDESN 67

Query: 61  WAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKSRDASIDLPLMNNEHYDGSTS 120
           WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KSRDASI LPLMNNEH   STS
Sbjct: 68  WAWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTS 127

Query: 121 QSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPV 180
            S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPV
Sbjct: 128 HSELVTLPM-TATSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPV 187

Query: 181 YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKK 240
           YVNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK
Sbjct: 188 YVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK 247

Query: 241 AETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
            E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Sbjct: 248 VESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL
Match: A0A6J1EKQ7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111435455 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 161/271 (59.41%), Postives = 183/271 (67.53%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDS 60
           MMS + DYR   D        Y   N QP  +W G  TTIA +SKE+K  W W  G VD+
Sbjct: 1   MMSSKTDYRYHPD-------GY---NFQP-SWWLGAPTTIA-ISKEDKVNWVWPNGLVDN 60

Query: 61  GPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTT 120
           GP+P  +TK +Q T++PP  GES +  +S+DASI LPLMNNEHY  ST +        TT
Sbjct: 61  GPQPNRSTKEVQETMTPPPYGESIVARQSKDASIVLPLMNNEHYHASTYE--------TT 120

Query: 121 GTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY Y+   YG LM  FGFQT+HNSEY       RM LPLAMAEEPVYVNAKQYHGILR
Sbjct: 121 ATSYQYNDVYYGQLMPPFGFQTLHNSEYT------RMTLPLAMAEEPVYVNAKQYHGILR 180

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDV 240
           RRQSRAKAEV N+ISRSQ+KPYLHESRHLHAMRRERGC GRFVSKKK  E   SM DD  
Sbjct: 181 RRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRFVSKKKTVEPIASMADDG- 234

Query: 241 EGSNISTLGSESMCNGSSYYQASQLHLSAYI 272
           +GSN+S          S+ YQ S+LHLSAYI
Sbjct: 241 KGSNMS----------SNCYQGSELHLSAYI 234

[Close]

BLAST of ClCG04G000250 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-26
Identity = 87/215 (40.47%), Postives = 106/215 (49.30%), Query Frame = 0


Query: 33  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-S 92
           WH  A            D S +  A    S G      R  T  K  Q+T SP   G+ S
Sbjct: 35  WHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYS 94

Query: 93  TLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTM 152
               +S    I  P              QLV  ++   +S  Y  P Y G+M A+G   +
Sbjct: 95  DKNQESLHHGITQP----------PPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPL 154

Query: 153 HNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYL 212
               Y   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYL
Sbjct: 155 GFVPYGG-MPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKS-RKPYL 214

Query: 213 HESRHLHAMRRERGCGGRFVSK------KKKAETR 233
           HESRH HAMRR RG GGRF  K      K+KAE +
Sbjct: 215 HESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEK 237

[Close]

BLAST of ClCG04G000250 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-26
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 126 YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 185
           Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 186 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 245
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 246 STLGSESM 254
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

[Close]

BLAST of ClCG04G000250 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-26
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 126 YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 185
           Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 191

Query: 186 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 245
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 192 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 251

Query: 246 STLGSESM 254
           ++ GSE +
Sbjct: 252 NSSGSEQV 257

[Close]

BLAST of ClCG04G000250 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-26
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 126 YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 185
           Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 191

Query: 186 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 245
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 192 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 251

Query: 246 STLGSESM 254
           ++ GSE +
Sbjct: 252 NSSGSEQV 257

[Close]

BLAST of ClCG04G000250 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-26
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 126 YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 185
           Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 186 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 245
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 246 STLGSESM 254
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

The following BLAST results are available for this feature:

BLAST of ClCG04G000250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460780.1	9.8e-101	77.21	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
XP_031739714.1	2.5e-96	72.63	nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]	[more]
XP_004150466.2	2.5e-96	72.63	nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]	[more]
XP_022151660.1	5.6e-88	69.26	nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]	[more]
XP_022151661.1	5.6e-88	69.26	nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]	[more]

BLAST of ClCG04G000250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M9	4.1e-25	40.47	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	5.3e-25	53.91	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.4e-20	41.24	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	6.8e-20	51.40	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	6.8e-20	44.10	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of ClCG04G000250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEE5	4.7e-101	77.21	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 P...	[more]
A0A0A0KWA0	1.2e-96	72.63	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G15932...	[more]
A0A6J1DFC4	2.7e-88	69.26	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1DBT5	2.7e-88	69.26	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1EKQ7	1.5e-67	59.41	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of ClCG04G000250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20910.1	2.9e-26	40.47	nuclear factor Y, subunit A9	[more]
AT5G12840.1	3.8e-26	53.91	nuclear factor Y, subunit A1	[more]
AT5G12840.2	3.8e-26	53.91	nuclear factor Y, subunit A1	[more]
AT5G12840.4	3.8e-26	53.91	nuclear factor Y, subunit A1	[more]
AT5G12840.3	3.8e-26	53.91	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 180..200
None	No IPR available	GENE3D	6.10.250.2430		coord: 164..227 e-value: 1.0E-30 score: 108.0
None	No IPR available	PANTHER	PTHR12632:SF43	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1	coord: 67..248
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 199..222 score: 80.56 coord: 167..189 score: 77.29
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 163..225 e-value: 4.6E-34 score: 129.2
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 166..222 e-value: 4.0E-26 score: 91.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 67..248
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 164..225 score: 37.444942
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 169..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G000250.2	ClCG04G000250.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity