ClCG03G017900 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G017900
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	agamous-like MADS-box protein AGL80
Location	CG_Chr03: 33072835 .. 33073591 (-)
RNA-Seq Expression	ClCG03G017900
Synteny	ClCG03G017900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGGAAGAAAGTGAAACTTGCTTACATAGCAAATGACTCTGCAAGAAAGGCAACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTAAGTGAATTGAGCACTCTTTGTGGGATTGAGGCTTGTGCAATCGTCTTTAGTCCTTACGATTCTCAGCCTGAGCTATGGCCTTCCCCCATTGGAGTCCAGCGCGTTCTCTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAGAGCAAGAAGATGGTAATTAAGTGTAGTTTTCAATAATGTTTATATATTTTTAATGCAATAATAAATGTAGGTTCTGAAAGAATAAAGGTGTCATTTTGAACAGGTGAACCAAGAGACGTTTCTAAGGCAGAGGATCGCAAAGGCGAACGAGCAATTGAAGAAGATGAGAAAGGACAACCGAGAGAAAGAGATCACACGGTTGATGTTTCAAAGCCTCACGGCTACAAAAGGGCTGCATGGCCTCAACATGCTTGATTTGAACGATCTAGGTTGGCTTATTGATCAGAATCTTAAAGACATTGGTACACGCATTGACACTCTAAAAAAGCCTCCGACTCAGCTACAGCCTCAGCCCCCACCTCAACCTTCACAAACTCAACCGCTCACGGCGGCGTGGCTCATGGAGCTTGTGAGCCCTCAGGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCCTAATAATGCAATGTGGTCCAGTGCCTTTTTCCCTTAG

mRNA sequence

ATGACAAGGAAGAAAGTGAAACTTGCTTACATAGCAAATGACTCTGCAAGAAAGGCAACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTAAGTGAATTGAGCACTCTTTGTGGGATTGAGGCTTGTGCAATCGTCTTTAGTCCTTACGATTCTCAGCCTGAGCTATGGCCTTCCCCCATTGGAGTCCAGCGCGTTCTCTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAGAGCAAGAAGATGGTGAACCAAGAGACGTTTCTAAGGCAGAGGATCGCAAAGGCGAACGAGCAATTGAAGAAGATGAGAAAGGACAACCGAGAGAAAGAGATCACACGGTTGATGTTTCAAAGCCTCACGGCTACAAAAGGGCTGCATGGCCTCAACATGCTTGATTTGAACGATCTAGGTTGGCTTATTGATCAGAATCTTAAAGACATTGGTACACGCATTGACACTCTAAAAAAGCCTCCGACTCAGCTACAGCCTCAGCCCCCACCTCAACCTTCACAAACTCAACCGCTCACGGCGGCGTGGCTCATGGAGCTTGTGAGCCCTCAGGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCCTAATAATGCAATGTGGTCCAGTGCCTTTTTCCCTTAG

Coding sequence (CDS)

ATGACAAGGAAGAAAGTGAAACTTGCTTACATAGCAAATGACTCTGCAAGAAAGGCAACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTAAGTGAATTGAGCACTCTTTGTGGGATTGAGGCTTGTGCAATCGTCTTTAGTCCTTACGATTCTCAGCCTGAGCTATGGCCTTCCCCCATTGGAGTCCAGCGCGTTCTCTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAGAGCAAGAAGATGGTGAACCAAGAGACGTTTCTAAGGCAGAGGATCGCAAAGGCGAACGAGCAATTGAAGAAGATGAGAAAGGACAACCGAGAGAAAGAGATCACACGGTTGATGTTTCAAAGCCTCACGGCTACAAAAGGGCTGCATGGCCTCAACATGCTTGATTTGAACGATCTAGGTTGGCTTATTGATCAGAATCTTAAAGACATTGGTACACGCATTGACACTCTAAAAAAGCCTCCGACTCAGCTACAGCCTCAGCCCCCACCTCAACCTTCACAAACTCAACCGCTCACGGCGGCGTGGCTCATGGAGCTTGTGAGCCCTCAGGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCCTAATAATGCAATGTGGTCCAGTGCCTTTTTCCCTTAG

Protein sequence

MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPSQTQPLTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP

Homology

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BLAST of ClCG03G017900 vs. NCBI nr
Match: XP_008450513.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK10313.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 203/224 (90.62%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQ---PSQTQPL 180
           LTA KGLHGLNMLDLNDLGWLIDQNLKDI  RID+LKKP    QPQ   Q   P  TQP 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLP-QPQAQAQAQAPPTTQPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYN NNAMWS+AFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

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BLAST of ClCG03G017900 vs. NCBI nr
Match: XP_004135760.1 (agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical protein Csa_006882 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 201/225 (89.33%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQP----QPPPQPSQTQP 180
           LTA KGLHGLNMLDLNDLGWLIDQNLKDI  RID+LK  P+  QP    Q   Q   TQP
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 LTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
            TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYN NNAMWS+AFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

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BLAST of ClCG03G017900 vs. NCBI nr
Match: XP_022968841.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 381.3 bits (978), Expect = 5.5e-102
Identity = 197/222 (88.74%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPS-QTQPLTA 180
           LTA KGLH LNMLDLNDL WLIDQNLKDI  RID+LKKPP + QP P P P     P TA
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHPQPPPPPQTA 180

Query: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           AWLMELVSPQDQMGFVGDDMLLPFGDQTY+ NNAMWS+AFFP
Sbjct: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

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BLAST of ClCG03G017900 vs. NCBI nr
Match: XP_023538956.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 197/224 (87.95%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQP---SQTQPL 180
           LTA KGLH LNMLDLNDL WLIDQNLKDI  RID+LKKPP   QP P P P       P 
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+ NNAMWS+AFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224

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BLAST of ClCG03G017900 vs. NCBI nr
Match: XP_022961458.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024050.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101
Identity = 196/222 (88.29%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPS-QTQPLTA 180
           LTA KGLH LNMLDLNDL WLIDQNLKDI  RID+LKKPP   QP P P P     P TA
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPQPPPPPQTA 180

Query: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           AWLMELVSPQDQMGFV DDMLLPFGDQTY+ NNAMWS+AFFP
Sbjct: 181 AWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

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BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 105/163 (64.42%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQL 164
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+   T++
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEI 163

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BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 74/154 (48.05%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK TF KRK+G+ KK++EL TLCG+EACA+V+SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 ATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTL 157
               ++ L+  DL DL   ID+ L  +  RI+ L
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33
Identity = 78/167 (46.71%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK TF KRK+G++KK +EL TLCG++ACA++ SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 ATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPP 170
               +  L+  DL DL   +++ L  +  R++ LK+        PPP
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPP 168

[Close]

BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30
Identity = 73/170 (42.94%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 4   KKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   ++KKM++QET+L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 TKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPSQ 174
               +  +  DL DL   I+  L  +  RI+++K+    L     P P++
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKENGESLLSSVSPFPTR 171

[Close]

BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 71/170 (41.76%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 4   KKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   +++KM++QET L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 TKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPSQ 174
               +  +  DL DL   ++  L  +  RI+++K+    L     P P++
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKENGESLLSSVSPFPTR 171

[Close]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL
Match: A0A5A7U988 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004670 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 203/224 (90.62%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQ---PSQTQPL 180
           LTA KGLHGLNMLDLNDLGWLIDQNLKDI  RID+LKKP    QPQ   Q   P  TQP 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLP-QPQAQAQAQAPPTTQPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYN NNAMWS+AFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL
Match: A0A1S3BPF2 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 203/224 (90.62%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQ---PSQTQPL 180
           LTA KGLHGLNMLDLNDLGWLIDQNLKDI  RID+LKKP    QPQ   Q   P  TQP 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLP-QPQAQAQAQAPPTTQPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYN NNAMWS+AFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL
Match: A0A0A0LVS3 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 201/225 (89.33%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQP----QPPPQPSQTQP 180
           LTA KGLHGLNMLDLNDLGWLIDQNLKDI  RID+LK  P+  QP    Q   Q   TQP
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 LTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
            TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYN NNAMWS+AFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL
Match: A0A6J1HW01 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.7e-102
Identity = 197/222 (88.74%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPS-QTQPLTA 180
           LTA KGLH LNMLDLNDL WLIDQNLKDI  RID+LKKPP + QP P P P     P TA
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHPQPPPPPQTA 180

Query: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           AWLMELVSPQDQMGFVGDDMLLPFGDQTY+ NNAMWS+AFFP
Sbjct: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL
Match: A0A6J1HBW4 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111462033 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 196/222 (88.29%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPPQPS-QTQPLTA 180
           LTA KGLH LNMLDLNDL WLIDQNLKDI  RID+LKKPP   QP P P P     P TA
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPQPPPPPQTA 180

Query: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYNPNNAMWSSAFFP 222
           AWLMELVSPQDQMGFV DDMLLPFGDQTY+ NNAMWS+AFFP
Sbjct: 181 AWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of ClCG03G017900 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-54
Identity = 105/163 (64.42%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQL 164
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+   T++
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEI 163

[Close]

BLAST of ClCG03G017900 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 86/180 (47.78%), Postives = 122/180 (67.78%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTR+KVK+ +I N++ARK+TFKKRK+GL+KK  EL  LCG+   A+V SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA E  KK+RK+N+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKK---PPTQLQPQPPPQPSQTQPL 178
           L+    +  +   +L D G++I+Q LKD+  RI+ LK+   P + L P   P  S   P+
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSALVPVAAPTTSSVMPV 180

[Close]

BLAST of ClCG03G017900 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 74/154 (48.05%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK TF KRK+G+ KK++EL TLCG+EACA+V+SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 ATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTL 157
               ++ L+  DL DL   ID+ L  +  RI+ L
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of ClCG03G017900 vs. TAIR 10
Match: AT1G65330.1 (MADS-box transcription factor family protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 78/167 (46.71%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK TF KRK+G++KK +EL TLCG++ACA++ SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 ATKGLHGLNMLDLNDLGWLIDQNLKDIGTRIDTLKKPPTQLQPQPPP 170
               +  L+  DL DL   +++ L  +  R++ LK+        PPP
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPP 168

[Close]

BLAST of ClCG03G017900 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-33
Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQL 120

Query: 121 LTATKGLHGLNMLDLN--DLGWLIDQNLKDI 150
           L+  KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LSG-KG-EKLNLTDRNREDLCKYIDQYLKEL 149

The following BLAST results are available for this feature:

BLAST of ClCG03G017900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450513.1	2.2e-103	90.63	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agam...	[more]
XP_004135760.1	6.5e-103	89.33	agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical p...	[more]
XP_022968841.1	5.5e-102	88.74	agamous-like MADS-box protein AGL80 [Cucurbita maxima]	[more]
XP_023538956.1	1.6e-101	87.95	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
XP_022961458.1	3.6e-101	88.29	agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-l...	[more]

BLAST of ClCG03G017900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	2.9e-53	64.42	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	1.5e-33	48.05	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	4.3e-33	46.71	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	2.6e-30	42.94	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	1.7e-29	41.76	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of ClCG03G017900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U988	1.1e-103	90.63	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BPF2	1.1e-103	90.63	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4...	[more]
A0A0A0LVS3	3.2e-103	89.33	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE...	[more]
A0A6J1HW01	2.7e-102	88.74	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 ...	[more]
A0A6J1HBW4	1.7e-101	88.29	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11146203...	[more]

BLAST of ClCG03G017900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	2.1e-54	64.42	AGAMOUS-like 80	[more]
AT5G26630.1	1.1e-39	47.78	MADS-box transcription factor family protein	[more]
AT1G65300.1	1.1e-34	48.05	AGAMOUS-like 38	[more]
AT1G65330.1	3.1e-34	46.71	MADS-box transcription factor family protein	[more]
AT3G05860.1	4.5e-33	51.66	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..175
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..177
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..177
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 39.48 coord: 23..38 score: 62.47 coord: 38..59 score: 29.15
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.4E-26 score: 101.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..51 e-value: 6.2E-19 score: 67.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 17.661095
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..97 e-value: 4.0E-20 score: 73.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..95
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 4.08991E-36 score: 120.443

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G017900.1	ClCG03G017900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding