ClCG03G017270 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G017270
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr03: 32405754 .. 32408175 (-)
RNA-Seq ExpressionClCG03G017270
SyntenyClCG03G017270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAATCCGAGCTTCAACATCCTGTGAATTCTGTTTCCAAAGGTGTTTGGCTCGTCAAGGCTGAAGCCAGAAGTTAGGAGGGAAGTCTCGAAAAGGAGGAGAACAAGGTCTTTAACGGATTTGTCGTTCTTGTCCACCTCGGCCCTCTTCCTGAGCTCTTCCATGATGGGGTTCTCAGGGTTGATTTCCATCGTCTTCTTGCTAGACATGTAACCAGCCATGCTATTGTCCTTCAATGCTTGAGCTTTCATGATTCGTTCCATGTTGGCTGTCCACCCATATTCACCAGTTACCAAACAGCAGGGAGAATCCACAACACGGTCAGAAACAACAACCTTCTCAACTTTGTCGCCCAAAACATCCTTTATCACCTTGCATAGCCCCTCGAACTTCTCCTTCAAAGCTTCCTTCTTCTTCTTTTCATCTTCACTCTCATCAAGTTTCAGACCTTCCTTGGTTGCTGACACAAGCTTCTTGCCTTCAAATTCCTTCAACTGACCAACTGCGTACTCATCGATTGCATCAACCATGAACAGAACTTCGTAACCCTTCTTCTTGAGCTTCTCAAGGAAAGGAGAATTTTCAACAGCTTTCTTGCTTTCACCAGTGATGTAAAAGATATCATTCTGGCCTTCCTTCATTCTGGTCACATAATCCTTCAGGCTGGTCAACTCATCACCACTCTTGGTAGAGTGGAAACGGAGAAGTTCAGCAATCTTAGGCCTGTTCTGGGAATCCTCGTGGATACCAAGCTTCAAGTTCTTGGAGAATGCCTCGTAGAACTTGTTGTAGTCTTCTTTGTTCTCGGCAATCTCAAAGAAGAGCTCAAGGCACTTCTTGACCAAGTTCTTCCGGATGACCTTCAAGATCTTGTTCTGCTGCAACATTTCTCTAGATATATTGAGGGGAAGATCCTCAGAGTCGACAATGCCCTTAACAAAGCCAAGGTATTCAGGAATCAATTCCTCACAGTTGTCCATGATGAAGACGCGGCGAACATACAACTTAATGTTGTTCGGCTTCTTCTTTGTGTCGAAGAGATCAAAAGGAGCCCTCTTGGGAACAAAGAGGATAGCCTTGAATTCCAATTGACCTTCAACAGAGAAGTGCTTTACGGCTAGATGCTCCTCCCAGTCGTTGGTAAGGCTCTTGTAGAAAGCAGCATACTCTTCCTTCGTAATCTCTTCTGGCTTCCTCATCCAGATAGGCTTCTGTTTGTTCACTAACGACCACTCATGTGAAACTTCCTTGATCTTCTTCTTTTTCTTTTCTTCCTTCTCCTTCTCTTCATCAACTTCCTCAACCTTTCCTTCCTCGTCCTTCTTCTCTTCCTCATCTTCATCATCAGAGATTTCCTTCTCAATGGTCTTCTCAACCCAGAGAGAGATTGGGTAGCTAATAAACTCAGAGTGCTTCTTGATCAAGTCCTTGAGACGACGCTCCTCAAGGTATTCAAGCTGATCTTCCTTGAGGTACAGGGTAATCTTAGTACCTCGGCCAAGATTCTCACCAGATGTGTCCCTGGTGACTGTGAACGAACCCCCAGCTTGGGACTCCCAAACATACTGCTCATCATCATTGTGTTTAGTGGTAACAATAACCTTTTCAGCCACAAGGTAGGCTGAGTAGAAACCAACTCCAAACTGACCAATCATGCTCACATCAGCACCGGCTGCAAGAGCTTCCATGAATTCCTTGGTCCCAGATCGTGCAATGGTACCCAGATTGTTCACCAAATCTAATAAAATAGACAAGCTCACCCAATGAGTTATACCATACGAAACAGATTAAAAAGACAGCCATACACACAGAGTTGATGCTTAGTAATCACTCACCAGCCTTGGTCATTCCAATACCACTGTCAATAATCGACAATGTGTTGTTTGCCTTATCAGGAATGATGTGAATAAAGAGCTCAGGCTGAGCATCTAGCTTGCTCTTGTCAGTCAAGCTCTCAAATCGGATTTTATCTAGAGCCTGAAATAAAACTCCACACCGTAAATTACAACAATCCCATACAGAAAATTTTCTTGGGAACTTTACAACCATTCAACTACCCAACAAGACTTCAAATAAAAAAACAGTAGCTATTCAGGAAGATTCTAGGAATGGTAAAACATCTTGATGCAGGCAAAAAAATTTATTGAGCGTGTGTATAAGAATAAAACGAAATGAAAACAGGGAAATCCAGAACACCAATCAAAGTTCATACTAAATAAAAAGATCTCCTAAGAAGAGTAAATAGAACGAAGATCAACGACAAAATTAAAGAGAAAGAAAGAATAGTTACGTCAGAGGAATTGCTGATAAGTTCTCGGAGGAAGATCTCCTTGTTGCTGTAAAAGGTGTTGATAATGAGACTAAGGAGCTGATTAATCTCGGCCTGGAAGGCAAATGTTTCAGTATCCGCCATAGCTGA

mRNA sequence

ATGCTTAATCCGAGCTTCAACATCCTGGTAATCTTAGTACCTCGGCCAAGATTCTCACCAGATGTGTCCCTGGTGACTGTGAACGAACCCCCAGCTTGGGACTCCCAAACATACTGCTCATCATCATTGTGTTTAGTGGTAACAATAACCTTTTCAGCCACAAGTTACGTCAGAGGAATTGCTGATAAGTTCTCGGAGGAAGATCTCCTTGTTGCTGTAAAAGGTGTTGATAATGAGACTAAGGAGCTGATTAATCTCGGCCTGGAAGGCAAATGTTTCAGTATCCGCCATAGCTGA

Coding sequence (CDS)

ATGCTTAATCCGAGCTTCAACATCCTGGTAATCTTAGTACCTCGGCCAAGATTCTCACCAGATGTGTCCCTGGTGACTGTGAACGAACCCCCAGCTTGGGACTCCCAAACATACTGCTCATCATCATTGTGTTTAGTGGTAACAATAACCTTTTCAGCCACAAGTTACGTCAGAGGAATTGCTGATAAGTTCTCGGAGGAAGATCTCCTTGTTGCTGTAAAAGGTGTTGATAATGAGACTAAGGAGCTGATTAATCTCGGCCTGGAAGGCAAATGTTTCAGTATCCGCCATAGCTGA

Protein sequence

MLNPSFNILVILVPRPRFSPDVSLVTVNEPPAWDSQTYCSSSLCLVVTITFSATSYVRGIADKFSEEDLLVAVKGVDNETKELINLGLEGKCFSIRHS
Homology
[Close]
BLAST of ClCG03G017270 vs. ExPASy TrEMBL
Match: A0A7J5YN33 (Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_019407 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.7e-04
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 22  VSLVTVNEPPAWDSQTYCSSSLCLVVTITFSATSY 57
           +S + VNEPPA DSQ YCSSSLCLV+T+T SAT Y
Sbjct: 258 LSTLIVNEPPAEDSQMYCSSSLCLVMTVTLSATRY 292

[Close]
BLAST of ClCG03G017270 vs. ExPASy TrEMBL
Match: A0A2M4B0H1 (Putative secreted protein OS=Anopheles triannulatus OX=58253 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.7e-04
Identity = 31/44 (70.45%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 11 ILVPRPRFSPDVSLVTVNEPPAWDSQTYCSSSLCLVVTITFSAT 55
          ILVPRP  SP +S  TVNEPPA DS TYCSSSL   VT T SAT
Sbjct: 29 ILVPRPSGSP-LSARTVNEPPADDSHTYCSSSLFFDVTTTLSAT 71

The following BLAST results are available for this feature:
BLAST of ClCG03G017270 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG03G017270 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG03G017270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J5YN335.7e-0471.43Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_019407 PE=4 SV... [more]
A0A2M4B0H19.7e-0470.45Putative secreted protein OS=Anopheles triannulatus OX=58253 PE=4 SV=1[more]
BLAST of ClCG03G017270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G017270.1ClCG03G017270.1mRNA