Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGTTCGTTTGAATGAACCAAAGCTCGATGTTGTCGAAGCCTTTCCAGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA
mRNA sequence
ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA
Coding sequence (CDS)
ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA
Protein sequence
MAKLIVLFMVATSSMVGAYEVLLGAYYGLAGNNLPPPWKVVPTVSKIQHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISPSTTSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPFPRT
Homology
BLAST of ClCG03G015140 vs. NCBI nr
Match:
XP_038880685.1 (probable glucan endo-1,3-beta-glucosidase BG5 [Benincasa hispida])
HSP 1 Score: 129.4 bits (324), Expect = 2.4e-26
Identity = 79/167 (47.31%), Postives = 103/167 (61.68%), Query Frame = 0
Query: 1 MAKLIVLFMVATSSMVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVS 60
++ +IV+FMV SS+VGAY+VLLGAYY LAGNNLPPPW+VV P ++
Sbjct: 4 LSHIIVIFMVFVSSIVGAYDVLLGAYYRLAGNNLPPPWEVVQLCKKYNIRRVRLYEPNLT 63
Query: 61 KIQHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISPSTTS--------------- 120
++ GMGID+SFGV N+LI NMATNHT + ++P
Sbjct: 64 VLESFRGMGIDVSFGVPNNLIENMATNHTAVEEWFINYVAPFIGDFTINYIVVGDKVIPG 123
Query: 121 ----LLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFD 134
+L V +SLQ LLNAR LGQVK TTLV +++L+ ++PPSSGAFD
Sbjct: 124 LDGRILQVMQSLQGLLNARNLGQVKLTTLVSITALSAQSPPSSGAFD 170
BLAST of ClCG03G015140 vs. NCBI nr
Match:
TYK10032.1 (lichenase-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 126.3 bits (316), Expect = 2.0e-25
Identity = 83/169 (49.11%), Postives = 100/169 (59.17%), Query Frame = 0
Query: 4 LIVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKI 63
+ +LFMVA SS +VGAY +LLGAYYGL NNLP PWKV+ P + I
Sbjct: 9 IALLFMVAMSSIVVGAYNILLGAYYGLESNNLPTPWKVMQLCEKYNIRRIRIDEPNLDVI 68
Query: 64 QHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------ST 123
+ G I++SFGVSN LITNMATNHT ++ I+P
Sbjct: 69 ESFRGTNIEVSFGVSNGLITNMATNHTAVEEWFANYIAPFIDDLTINYIVVGDKAVPGLD 128
Query: 124 TSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPF 138
S+L V +SLQ+LLN R+LGQVK TTLVGLS+L VK PPSSGAFD F
Sbjct: 129 NSILPVMKSLQDLLNRRFLGQVKITTLVGLSALGVKAPPSSGAFDPNVF 177
BLAST of ClCG03G015140 vs. NCBI nr
Match:
KAA0055781.1 (lichenase-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 124.0 bits (310), Expect = 1.0e-24
Identity = 83/169 (49.11%), Postives = 99/169 (58.58%), Query Frame = 0
Query: 4 LIVLFMVATSSMV-GAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKI 63
+ +LFMV SS+V GAY VLLGAYYGL NNLP PWKV+ P + I
Sbjct: 9 IALLFMVDMSSIVLGAYNVLLGAYYGLESNNLPTPWKVMQLCEKYNIRRIRIDEPNLDVI 68
Query: 64 QHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------ST 123
+ G I++SFGVSN LITNMATNHT ++ I+P
Sbjct: 69 ESFRGTNIEVSFGVSNGLITNMATNHTAVEEWFANYIAPFIDDLTINYIVVGDKAVPGLD 128
Query: 124 TSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPF 138
S+L V +SLQ+LLN R+LGQVK TTLVGLS+L VK PPSSGAFD F
Sbjct: 129 DSILPVMKSLQDLLNRRFLGQVKITTLVGLSALGVKAPPSSGAFDPNVF 177
BLAST of ClCG03G015140 vs. NCBI nr
Match:
KAA0055782.1 (lichenase-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 110.9 bits (276), Expect = 8.8e-21
Identity = 77/164 (46.95%), Postives = 92/164 (56.10%), Query Frame = 0
Query: 5 IVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKIQ 64
++ FMVA SS +V AY+VLLGAYYG GNNLPPP KVV P I
Sbjct: 11 LLYFMVAMSSIVVRAYDVLLGAYYGTEGNNLPPPEKVVQLCQKYNIRRIRFSEPNFDIID 70
Query: 65 HSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------STT 124
G I+LSF V+ LITNMATNHT + ++P
Sbjct: 71 AFRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDD 130
Query: 125 SLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFD 134
++L V +SLQ LLN RYLGQVK TTLVGL++L V+TPPSSG FD
Sbjct: 131 NILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFD 174
BLAST of ClCG03G015140 vs. NCBI nr
Match:
TYK10033.1 (lichenase-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 110.9 bits (276), Expect = 8.8e-21
Identity = 77/164 (46.95%), Postives = 92/164 (56.10%), Query Frame = 0
Query: 5 IVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKIQ 64
++ FMVA SS +V AY+VLLGAYYG GNNLPPP KVV P I
Sbjct: 11 LLYFMVAMSSIVVRAYDVLLGAYYGTEGNNLPPPEKVVQLCQKYNIRRIRFSEPNFDIID 70
Query: 65 HSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------STT 124
G I+LSF V+ LITNMATNHT + ++P
Sbjct: 71 AFRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDD 130
Query: 125 SLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFD 134
++L V +SLQ LLN RYLGQVK TTLVGL++L V+TPPSSG FD
Sbjct: 131 NILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFD 174
BLAST of ClCG03G015140 vs. ExPASy TrEMBL
Match:
A0A5D3CFE1 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001650 PE=3 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 9.8e-26
Identity = 83/169 (49.11%), Postives = 100/169 (59.17%), Query Frame = 0
Query: 4 LIVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKI 63
+ +LFMVA SS +VGAY +LLGAYYGL NNLP PWKV+ P + I
Sbjct: 9 IALLFMVAMSSIVVGAYNILLGAYYGLESNNLPTPWKVMQLCEKYNIRRIRIDEPNLDVI 68
Query: 64 QHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------ST 123
+ G I++SFGVSN LITNMATNHT ++ I+P
Sbjct: 69 ESFRGTNIEVSFGVSNGLITNMATNHTAVEEWFANYIAPFIDDLTINYIVVGDKAVPGLD 128
Query: 124 TSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPF 138
S+L V +SLQ+LLN R+LGQVK TTLVGLS+L VK PPSSGAFD F
Sbjct: 129 NSILPVMKSLQDLLNRRFLGQVKITTLVGLSALGVKAPPSSGAFDPNVF 177
BLAST of ClCG03G015140 vs. ExPASy TrEMBL
Match:
A0A5A7UQE4 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001680 PE=3 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 4.9e-25
Identity = 83/169 (49.11%), Postives = 99/169 (58.58%), Query Frame = 0
Query: 4 LIVLFMVATSSMV-GAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKI 63
+ +LFMV SS+V GAY VLLGAYYGL NNLP PWKV+ P + I
Sbjct: 9 IALLFMVDMSSIVLGAYNVLLGAYYGLESNNLPTPWKVMQLCEKYNIRRIRIDEPNLDVI 68
Query: 64 QHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------ST 123
+ G I++SFGVSN LITNMATNHT ++ I+P
Sbjct: 69 ESFRGTNIEVSFGVSNGLITNMATNHTAVEEWFANYIAPFIDDLTINYIVVGDKAVPGLD 128
Query: 124 TSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPF 138
S+L V +SLQ+LLN R+LGQVK TTLVGLS+L VK PPSSGAFD F
Sbjct: 129 DSILPVMKSLQDLLNRRFLGQVKITTLVGLSALGVKAPPSSGAFDPNVF 177
BLAST of ClCG03G015140 vs. ExPASy TrEMBL
Match:
A0A5A7UIV1 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001690 PE=3 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 4.3e-21
Identity = 77/164 (46.95%), Postives = 92/164 (56.10%), Query Frame = 0
Query: 5 IVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKIQ 64
++ FMVA SS +V AY+VLLGAYYG GNNLPPP KVV P I
Sbjct: 11 LLYFMVAMSSIVVRAYDVLLGAYYGTEGNNLPPPEKVVQLCQKYNIRRIRFSEPNFDIID 70
Query: 65 HSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------STT 124
G I+LSF V+ LITNMATNHT + ++P
Sbjct: 71 AFRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDD 130
Query: 125 SLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFD 134
++L V +SLQ LLN RYLGQVK TTLVGL++L V+TPPSSG FD
Sbjct: 131 NILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFD 174
BLAST of ClCG03G015140 vs. ExPASy TrEMBL
Match:
A0A5D3CDU1 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001660 PE=3 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 4.3e-21
Identity = 77/164 (46.95%), Postives = 92/164 (56.10%), Query Frame = 0
Query: 5 IVLFMVATSS-MVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PTVSKIQ 64
++ FMVA SS +V AY+VLLGAYYG GNNLPPP KVV P I
Sbjct: 11 LLYFMVAMSSIVVRAYDVLLGAYYGTEGNNLPPPEKVVQLCQKYNIRRIRFSEPNFDIID 70
Query: 65 HSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP-------------------STT 124
G I+LSF V+ LITNMATNHT + ++P
Sbjct: 71 AFRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDD 130
Query: 125 SLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFD 134
++L V +SLQ LLN RYLGQVK TTLVGL++L V+TPPSSG FD
Sbjct: 131 NILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFD 174
BLAST of ClCG03G015140 vs. ExPASy TrEMBL
Match:
A0A6J1C4V7 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111007943 PE=3 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 75/170 (44.12%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 1 MAKL--IVLFMVATSSMVGAYEVLLGAYYGLAGNNLPPPWKVV---------------PT 60
MAKL I++F +A+ S V A +VLLG YYGL G+N+PPPWKVV P
Sbjct: 1 MAKLAHIIVFFMASMSAVRANDVLLGVYYGLFGDNVPPPWKVVQLCVKYNIRRIRLDEPN 60
Query: 61 VSKIQHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISP----------------- 120
+ G GID+SFGV N ++ NM N + ++ + P
Sbjct: 61 LEVFDAFCGAGIDISFGVPNDMLINMKANESAVVEWFNTYVEPYIGDFVINYIIVGNKAI 120
Query: 121 --STTSLLLVTESLQNLLNARYLGQVKTTTLVGL-SSLAVKTPPSSGAFD 134
+L V +SLQNLLNARYLGQVK TTLVG ++LAVK PPSSGAFD
Sbjct: 121 PGLDDCILPVMKSLQNLLNARYLGQVKLTTLVGYNAALAVKDPPSSGAFD 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CFE1 | 9.8e-26 | 49.11 | (1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A5A7UQE4 | 4.9e-25 | 49.11 | (1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5A7UIV1 | 4.3e-21 | 46.95 | (1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3CDU1 | 4.3e-21 | 46.95 | (1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A6J1C4V7 | 2.1e-20 | 44.12 | (1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111007943 ... | [more] |
Match Name | E-value | Identity | Description | |