ClCG03G013180 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G013180
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCCHC-type domain-containing protein
LocationCG_Chr03: 27121372 .. 27122190 (-)
RNA-Seq ExpressionClCG03G013180
SyntenyClCG03G013180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA

mRNA sequence

ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA

Coding sequence (CDS)

ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA

Protein sequence

MAKLFKCGRSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEVQLPENWPPPPPGPDRTRVEFQ
Homology
BLAST of ClCG03G013180 vs. NCBI nr
Match: KAG6588193.1 (hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.2 bits (866), Expect = 6.6e-89
Identity = 177/257 (68.87%), Postives = 205/257 (79.77%), Query Frame = 0

Query: 7   CG--RSSCSRLSSSHTLDNNEYDKVEKGK-DLLTWNIPTLPTSKIYKTNLLTHISSHSSL 66
           CG  RSSCS+ +SSHTLD +EYD VEKGK DLLTWNIPTLPTSKIYKTNL TH  S +SL
Sbjct: 3   CGRRRSSCSKSASSHTLDTDEYDIVEKGKDDLLTWNIPTLPTSKIYKTNLFTHF-SRNSL 62

Query: 67  IITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRKPL 126
           + TK+ N  LS+GGG LNL       ++E +  W L NKY +IHIGMVQIGVKALTR PL
Sbjct: 63  LKTKEGNSPLSNGGGYLNL-------IREDDDLWHLQNKYRTIHIGMVQIGVKALTRGPL 122

Query: 127 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 186
           NAKVLLCLRDARH NLQDSLLGMVEANL+DGP YFNVFPNIVESL    LD++LFL+A+V
Sbjct: 123 NAKVLLCLRDARHRNLQDSLLGMVEANLKDGPLYFNVFPNIVESLSAPRLDDLLFLNAKV 182

Query: 187 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 246
           R+FE LPEGP NIV+MYRVCYK +K G +TR LL++P NG+T+FFQ D  ++ N    +Q
Sbjct: 183 REFEQLPEGPKNIVVMYRVCYKVLKPGVETRVLLKTPSNGRTIFFQTDFETAMND--FEQ 242

Query: 247 RVTVWDEVQLPENWPPP 261
            VTVW+EVQLPENWP P
Sbjct: 243 GVTVWNEVQLPENWPTP 249

BLAST of ClCG03G013180 vs. NCBI nr
Match: KAG6590198.1 (hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.2 bits (461), Expect = 6.1e-42
Identity = 110/263 (41.83%), Postives = 153/263 (58.17%), Query Frame = 0

Query: 9   RSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIY----KTNLLTHISSHSSLI 68
           RS  S+    H+L++ EY  VEKG +L+ W +P +P  K+Y    K  L T  +     I
Sbjct: 6   RSCSSKFVDDHSLEDEEY--VEKGNNLVKWTMPNVPIHKLYEHQTKKKLFTFSTKIDRSI 65

Query: 69  ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSI-HIGMVQIGVKALTRK-P 128
              +   S  +GGG   L+       K+   ++    K++S+ +IG+VQIGVK +TRK P
Sbjct: 66  RITEGQISFGNGGGSFKLY-------KQAPSSYGQKGKFYSVMNIGLVQIGVKTITRKIP 125

Query: 129 LNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDL-DNMLFLSA 188
            NA ++LC+RD R   ++DS++ MVE+ L DGPFYFNVFPN+  SLF++ L  N+L +  
Sbjct: 126 SNASIILCVRDNRIEKVEDSIIAMVESKLGDGPFYFNVFPNMNFSLFEASLIMNVLSVHV 185

Query: 189 EVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQND-----NGSSN 248
            V+ F+ L +G   IV+  R CYK  +  F   ALLESP  GKTVFFQ       NG   
Sbjct: 186 LVKGFDQLAKGSEPIVVSCRTCYKLNQTKFGPEALLESPV-GKTVFFQTQIVGKLNGGGG 245

Query: 249 NKNVLDQRVTVWDEVQLPENWPP 260
               + Q+VT WD+VQLP NWPP
Sbjct: 246 GGGDVVQKVTQWDQVQLPSNWPP 258

BLAST of ClCG03G013180 vs. NCBI nr
Match: KGN66493.1 (hypothetical protein Csa_007053 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 8.8e-41
Identity = 111/268 (41.42%), Postives = 157/268 (58.58%), Query Frame = 0

Query: 11  SCS--RLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHI----SSHSSLI 70
           SCS       H+L+  EY  VEKGK L+ W +P +P  KIY+     H     S +   I
Sbjct: 7   SCSSKNFVGDHSLEEEEY--VEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSI 66

Query: 71  ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PL 130
            T +   S  + GG   L+         C    +  + +++++IG+VQIGVK LT+K P 
Sbjct: 67  RTTEGQISFGNEGGSFKLY--GQTPSSYCRRRRI--SFFNTMNIGLVQIGVKTLTKKIPP 126

Query: 131 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 190
           NA ++LCLRD R   L+DSLL +VE+ L DGPFYFNVFPNI  SLF S + N+L +   V
Sbjct: 127 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 186

Query: 191 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 250
           +  + +P+G   IV+  R CYK  +  F + AL+ESP  GKTVFFQ +    ++ +V+ Q
Sbjct: 187 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPV-GKTVFFQIEIFEDDDDDVV-Q 246

Query: 251 RVTVWDEVQLPENWPPPPPGPDRTRVEF 272
           +VT+W++VQLP +WPP    P   R+ F
Sbjct: 247 KVTMWNQVQLPSDWPPRLHIPTVPRLVF 266

BLAST of ClCG03G013180 vs. NCBI nr
Match: KGN66494.1 (hypothetical protein Csa_006902 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-38
Identity = 102/235 (43.40%), Postives = 138/235 (58.72%), Query Frame = 0

Query: 18  SHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGG 77
           SH+LD+ EY  ++KGK+LL W IP +PT+KIYK+N     S     I TK++     +G 
Sbjct: 14  SHSLDSEEY--IKKGKNLLKWKIPKIPTTKIYKSNPFIFFS--DPFIKTKEETMPCENGS 73

Query: 78  GCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PLNAKVLLCLRDARH 137
               L  G  +        +     Y  +++GM+QIGVK LT K P NA ++LC+ D R+
Sbjct: 74  QVFRLISGNPMVDN-----FQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIILCVFDTRN 133

Query: 138 SNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNI 197
            N +DS+LG+VE+ L DGP +FN+FPNI   +F   L     L A V+ FE LP+G + I
Sbjct: 134 DNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQGTSPI 193

Query: 198 VLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEV 252
            LM+R CYK       T AL+ES P GKTVFFQ    +  N  V DQ+V+ WDEV
Sbjct: 194 SLMWRTCYKLQASALPT-ALIES-PQGKTVFFQT---NFENSKVADQKVSQWDEV 234

BLAST of ClCG03G013180 vs. NCBI nr
Match: KAG6656908.1 (hypothetical protein CIPAW_04G053800 [Carya illinoinensis])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-31
Identity = 93/261 (35.63%), Postives = 148/261 (56.70%), Query Frame = 0

Query: 1   MAKLFKCGRSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYK----TNLLTH 60
           M  LFK   S+ +    +  ++  +Y  ++  ++L  W IP +P ++IYK    ++ L+ 
Sbjct: 1   MNSLFKPETSTVNTPLETENVNQEDYSIIDIERNLQDWTIPNVPKNQIYKYSTFSSKLSF 60

Query: 61  ISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVK 120
           +++++  I T +K  SL+      N +    L  KE         KY  IHIG+VQ+ VK
Sbjct: 61  LTNYT--IKTVEKTISLN------NDYESLQLLTKEA-IKHHKEQKYSFIHIGLVQVAVK 120

Query: 121 ALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNM 180
            LTR  LNA VLLCLRD RH N  DSLLGMVE++L  GP YFN +PN   SLFDS++ + 
Sbjct: 121 PLTRNGLNASVLLCLRDGRHYNFHDSLLGMVESSLFQGPVYFNCYPNYSLSLFDSNILHA 180

Query: 181 LFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSN 240
           L L+ +   + ++ +G + + ++YR+ YK +K   + +AL+ S P G T+  Q+   S+ 
Sbjct: 181 LTLNIKTNGYHMM-KGSHPLTVVYRIHYKLMKTTLEPQALITS-PKGYTLLLQS---STP 240

Query: 241 NKNVLDQRVTVWDEVQLPENW 258
           N ++   +   W++V LP  W
Sbjct: 241 NSSIQIPKQIHWNQVTLPNEW 247

BLAST of ClCG03G013180 vs. ExPASy Swiss-Prot
Match: P05396 (Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.5e-08
Identity = 32/99 (32.32%), Postives = 50/99 (50.51%), Query Frame = 0

Query: 106 IHIGMVQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIV 165
           IH G +++ +KA  R+ +N+ + + L D R ++ QDS+LG    NL  G F F V+P   
Sbjct: 119 IHFGAIKVLIKARFREGINSPIKMALIDDRITDRQDSILGAAHGNLVYGKFMFTVYPKYT 178

Query: 166 ESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCY 205
            S+ D  LD  L         +L+ +G     + Y V Y
Sbjct: 179 TSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAY 217

BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match: A0A0A0LXM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 111/268 (41.42%), Postives = 157/268 (58.58%), Query Frame = 0

Query: 11  SCS--RLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHI----SSHSSLI 70
           SCS       H+L+  EY  VEKGK L+ W +P +P  KIY+     H     S +   I
Sbjct: 7   SCSSKNFVGDHSLEEEEY--VEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSI 66

Query: 71  ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PL 130
            T +   S  + GG   L+         C    +  + +++++IG+VQIGVK LT+K P 
Sbjct: 67  RTTEGQISFGNEGGSFKLY--GQTPSSYCRRRRI--SFFNTMNIGLVQIGVKTLTKKIPP 126

Query: 131 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 190
           NA ++LCLRD R   L+DSLL +VE+ L DGPFYFNVFPNI  SLF S + N+L +   V
Sbjct: 127 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 186

Query: 191 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 250
           +  + +P+G   IV+  R CYK  +  F + AL+ESP  GKTVFFQ +    ++ +V+ Q
Sbjct: 187 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPV-GKTVFFQIEIFEDDDDDVV-Q 246

Query: 251 RVTVWDEVQLPENWPPPPPGPDRTRVEF 272
           +VT+W++VQLP +WPP    P   R+ F
Sbjct: 247 KVTMWNQVQLPSDWPPRLHIPTVPRLVF 266

BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match: A0A0A0LZS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.2e-39
Identity = 102/235 (43.40%), Postives = 138/235 (58.72%), Query Frame = 0

Query: 18  SHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGG 77
           SH+LD+ EY  ++KGK+LL W IP +PT+KIYK+N     S     I TK++     +G 
Sbjct: 14  SHSLDSEEY--IKKGKNLLKWKIPKIPTTKIYKSNPFIFFS--DPFIKTKEETMPCENGS 73

Query: 78  GCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PLNAKVLLCLRDARH 137
               L  G  +        +     Y  +++GM+QIGVK LT K P NA ++LC+ D R+
Sbjct: 74  QVFRLISGNPMVDN-----FQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIILCVFDTRN 133

Query: 138 SNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNI 197
            N +DS+LG+VE+ L DGP +FN+FPNI   +F   L     L A V+ FE LP+G + I
Sbjct: 134 DNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQGTSPI 193

Query: 198 VLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEV 252
            LM+R CYK       T AL+ES P GKTVFFQ    +  N  V DQ+V+ WDEV
Sbjct: 194 SLMWRTCYKLQASALPT-ALIES-PQGKTVFFQT---NFENSKVADQKVSQWDEV 234

BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match: A0A5D3D5V1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30
Identity = 79/151 (52.32%), Postives = 99/151 (65.56%), Query Frame = 0

Query: 106 IHIGMVQIGVKALTRK-PLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNI 165
           +++GM+QIGVK LT K P NA ++LC+ D R+ N +DS+LG+VEA L DGP +FN+FPNI
Sbjct: 31  LNMGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFEDSILGLVEAKLSDGPMFFNIFPNI 90

Query: 166 VESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGK 225
             SLF   L   L L A V+ FE LP+G + I LM+R CYK     F T AL+ES P GK
Sbjct: 91  TMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISLMWRTCYKLQGSAFPT-ALIES-PQGK 150

Query: 226 TVFFQNDNGSSNNKNVLDQRVTVWDEVQLPE 256
           TVFFQ D     N  V  Q+V+ WDEV   E
Sbjct: 151 TVFFQTD---FENSKVAVQKVSEWDEVVCKE 176

BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match: A0A5A7U9X3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29
Identity = 78/151 (51.66%), Postives = 98/151 (64.90%), Query Frame = 0

Query: 106 IHIGMVQIGVKALTRK-PLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNI 165
           +++GM+QIGVK LT K   NA ++LC+ D R+ N +DS+LG+VEA L DGP +FN+FPNI
Sbjct: 31  LNMGMIQIGVKTLTTKISSNASIILCVFDTRNDNFEDSILGLVEAKLSDGPMFFNIFPNI 90

Query: 166 VESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGK 225
             SLF   L   L L A V+ FE LP+G + I LM+R CYK     F T AL+ES P GK
Sbjct: 91  TMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISLMWRTCYKLQGSAFPT-ALIES-PQGK 150

Query: 226 TVFFQNDNGSSNNKNVLDQRVTVWDEVQLPE 256
           TVFFQ D     N  V  Q+V+ WDEV   E
Sbjct: 151 TVFFQTD---FENSKVAVQKVSEWDEVVCKE 176

BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match: A0A7N2M3N6 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 92/278 (33.09%), Postives = 144/278 (51.80%), Query Frame = 0

Query: 1   MAKLFKCGRSSCSRLS--------SSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTN 60
           M KL++   S  SR S          HT+D+NE        D   W IP + T  IYKT+
Sbjct: 1   MDKLWRSNSSISSRTSCPPDIVNEEDHTIDDNELI-----PDFRKWTIPKVDTKTIYKTS 60

Query: 61  LL--THISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGM 120
            +  T  S++ +  I +  + S  H   C        L+ K+    +L + K++ +HIGM
Sbjct: 61  FVESTFHSAYKARTIEQIFSISRIHEKCC--------LFTKKNINDFLPAKKFYYLHIGM 120

Query: 121 VQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFD 180
           VQ+ +K LTRK +NA VL+CLRDAR    +DS+LGM+ A+L DGP YFN +P++  +L D
Sbjct: 121 VQVAIKPLTRKGINASVLMCLRDARFKIFKDSILGMITASLYDGPVYFNCYPDLTLALDD 180

Query: 181 SDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQN 240
            ++   L L+     +  + EG     L+YR+ YK +       A++   P+GKT+  Q 
Sbjct: 181 PNIVKALTLNIASSGYH-MEEGSKPFALIYRIYYKLMGTQMNPCAIMPREPSGKTMLIQ- 240

Query: 241 DNGSSNNKNVLDQRVTVWDEVQLPENW------PPPPP 263
              S+ +  +   ++  W +V+LP++W      PP  P
Sbjct: 241 --CSTPDAKIQVPKMIQWQDVKLPKDWLLEQETPPTKP 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6588193.16.6e-8968.87hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590198.16.1e-4241.83hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN66493.18.8e-4141.42hypothetical protein Csa_007053 [Cucumis sativus][more]
KGN66494.11.1e-3843.40hypothetical protein Csa_006902 [Cucumis sativus][more]
KAG6656908.11.3e-3135.63hypothetical protein CIPAW_04G053800 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
P053963.5e-0832.32Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LXM34.2e-4141.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1[more]
A0A0A0LZS05.2e-3943.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1[more]
A0A5D3D5V13.4e-3052.32Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE... [more]
A0A5A7U9X32.9e-2951.66Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 P... [more]
A0A7N2M3N61.1e-2833.09Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028919Viral movement proteinPFAMPF01107MPcoord: 100..206
e-value: 3.5E-13
score: 49.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..272
NoneNo IPR availablePANTHERPTHR46249FAMILY NOT NAMEDcoord: 100..238
NoneNo IPR availablePANTHERPTHR46249:SF37VIRAL MOVEMENT PROTEINcoord: 100..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G013180.1ClCG03G013180.1mRNA