Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA
mRNA sequence
ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA
Coding sequence (CDS)
ATGGCAAAGCTTTTCAAGTGTGGGAGAAGTTCATGTTCCAGATTATCCTCATCCCACACTTTAGACAACAATGAATATGACAAAGTGGAGAAAGGCAAAGATCTTCTAACATGGAACATCCCAACTCTCCCCACTTCCAAAATCTACAAAACAAACCTCCTCACTCACATCTCATCTCACAGTTCCCTCATCATAACCAAACAAAAAAACTGCTCTCTAAGCCATGGTGGTGGATGTCTAAACCTGTTTTGTGGAGCTGACTTGTGGGTCAAAGAATGCAATTACGCATGGCTCCTCTCAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACAAGAAAGCCCTTAAATGCCAAAGTGCTTTTGTGTCTTAGAGATGCAAGACATAGCAATTTACAAGACTCTCTTTTAGGGATGGTGGAGGCCAATTTGAGAGATGGCCCATTTTATTTCAATGTCTTTCCTAACATTGTGGAGTCTCTATTTGATTCTGATTTGGACAATATGTTGTTTCTGAGTGCTGAAGTTAGAGACTTTGAGCTCCTCCCTGAAGGTCCCAATAACATTGTTTTGATGTATAGGGTTTGTTACAAAGCCATAAAACTTGGGTTCAAGACTCGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACCGTGTTTTTCCAAAATGATAATGGGAGTTCGAATAATAAGAATGTTTTGGATCAACGAGTTACTGTATGGGATGAAGTTCAGCTGCCGGAAAACTGGCCGCCGCCTCCGCCCGGACCGGATCGGACTCGGGTGGAATTTCAATAA
Protein sequence
MAKLFKCGRSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEVQLPENWPPPPPGPDRTRVEFQ
Homology
BLAST of ClCG03G013180 vs. NCBI nr
Match:
KAG6588193.1 (hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 338.2 bits (866), Expect = 6.6e-89
Identity = 177/257 (68.87%), Postives = 205/257 (79.77%), Query Frame = 0
Query: 7 CG--RSSCSRLSSSHTLDNNEYDKVEKGK-DLLTWNIPTLPTSKIYKTNLLTHISSHSSL 66
CG RSSCS+ +SSHTLD +EYD VEKGK DLLTWNIPTLPTSKIYKTNL TH S +SL
Sbjct: 3 CGRRRSSCSKSASSHTLDTDEYDIVEKGKDDLLTWNIPTLPTSKIYKTNLFTHF-SRNSL 62
Query: 67 IITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRKPL 126
+ TK+ N LS+GGG LNL ++E + W L NKY +IHIGMVQIGVKALTR PL
Sbjct: 63 LKTKEGNSPLSNGGGYLNL-------IREDDDLWHLQNKYRTIHIGMVQIGVKALTRGPL 122
Query: 127 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 186
NAKVLLCLRDARH NLQDSLLGMVEANL+DGP YFNVFPNIVESL LD++LFL+A+V
Sbjct: 123 NAKVLLCLRDARHRNLQDSLLGMVEANLKDGPLYFNVFPNIVESLSAPRLDDLLFLNAKV 182
Query: 187 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 246
R+FE LPEGP NIV+MYRVCYK +K G +TR LL++P NG+T+FFQ D ++ N +Q
Sbjct: 183 REFEQLPEGPKNIVVMYRVCYKVLKPGVETRVLLKTPSNGRTIFFQTDFETAMND--FEQ 242
Query: 247 RVTVWDEVQLPENWPPP 261
VTVW+EVQLPENWP P
Sbjct: 243 GVTVWNEVQLPENWPTP 249
BLAST of ClCG03G013180 vs. NCBI nr
Match:
KAG6590198.1 (hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 182.2 bits (461), Expect = 6.1e-42
Identity = 110/263 (41.83%), Postives = 153/263 (58.17%), Query Frame = 0
Query: 9 RSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIY----KTNLLTHISSHSSLI 68
RS S+ H+L++ EY VEKG +L+ W +P +P K+Y K L T + I
Sbjct: 6 RSCSSKFVDDHSLEDEEY--VEKGNNLVKWTMPNVPIHKLYEHQTKKKLFTFSTKIDRSI 65
Query: 69 ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSI-HIGMVQIGVKALTRK-P 128
+ S +GGG L+ K+ ++ K++S+ +IG+VQIGVK +TRK P
Sbjct: 66 RITEGQISFGNGGGSFKLY-------KQAPSSYGQKGKFYSVMNIGLVQIGVKTITRKIP 125
Query: 129 LNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDL-DNMLFLSA 188
NA ++LC+RD R ++DS++ MVE+ L DGPFYFNVFPN+ SLF++ L N+L +
Sbjct: 126 SNASIILCVRDNRIEKVEDSIIAMVESKLGDGPFYFNVFPNMNFSLFEASLIMNVLSVHV 185
Query: 189 EVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQND-----NGSSN 248
V+ F+ L +G IV+ R CYK + F ALLESP GKTVFFQ NG
Sbjct: 186 LVKGFDQLAKGSEPIVVSCRTCYKLNQTKFGPEALLESPV-GKTVFFQTQIVGKLNGGGG 245
Query: 249 NKNVLDQRVTVWDEVQLPENWPP 260
+ Q+VT WD+VQLP NWPP
Sbjct: 246 GGGDVVQKVTQWDQVQLPSNWPP 258
BLAST of ClCG03G013180 vs. NCBI nr
Match:
KGN66493.1 (hypothetical protein Csa_007053 [Cucumis sativus])
HSP 1 Score: 178.3 bits (451), Expect = 8.8e-41
Identity = 111/268 (41.42%), Postives = 157/268 (58.58%), Query Frame = 0
Query: 11 SCS--RLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHI----SSHSSLI 70
SCS H+L+ EY VEKGK L+ W +P +P KIY+ H S + I
Sbjct: 7 SCSSKNFVGDHSLEEEEY--VEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSI 66
Query: 71 ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PL 130
T + S + GG L+ C + + +++++IG+VQIGVK LT+K P
Sbjct: 67 RTTEGQISFGNEGGSFKLY--GQTPSSYCRRRRI--SFFNTMNIGLVQIGVKTLTKKIPP 126
Query: 131 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 190
NA ++LCLRD R L+DSLL +VE+ L DGPFYFNVFPNI SLF S + N+L + V
Sbjct: 127 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 186
Query: 191 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 250
+ + +P+G IV+ R CYK + F + AL+ESP GKTVFFQ + ++ +V+ Q
Sbjct: 187 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPV-GKTVFFQIEIFEDDDDDVV-Q 246
Query: 251 RVTVWDEVQLPENWPPPPPGPDRTRVEF 272
+VT+W++VQLP +WPP P R+ F
Sbjct: 247 KVTMWNQVQLPSDWPPRLHIPTVPRLVF 266
BLAST of ClCG03G013180 vs. NCBI nr
Match:
KGN66494.1 (hypothetical protein Csa_006902 [Cucumis sativus])
HSP 1 Score: 171.4 bits (433), Expect = 1.1e-38
Identity = 102/235 (43.40%), Postives = 138/235 (58.72%), Query Frame = 0
Query: 18 SHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGG 77
SH+LD+ EY ++KGK+LL W IP +PT+KIYK+N S I TK++ +G
Sbjct: 14 SHSLDSEEY--IKKGKNLLKWKIPKIPTTKIYKSNPFIFFS--DPFIKTKEETMPCENGS 73
Query: 78 GCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PLNAKVLLCLRDARH 137
L G + + Y +++GM+QIGVK LT K P NA ++LC+ D R+
Sbjct: 74 QVFRLISGNPMVDN-----FQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIILCVFDTRN 133
Query: 138 SNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNI 197
N +DS+LG+VE+ L DGP +FN+FPNI +F L L A V+ FE LP+G + I
Sbjct: 134 DNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQGTSPI 193
Query: 198 VLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEV 252
LM+R CYK T AL+ES P GKTVFFQ + N V DQ+V+ WDEV
Sbjct: 194 SLMWRTCYKLQASALPT-ALIES-PQGKTVFFQT---NFENSKVADQKVSQWDEV 234
BLAST of ClCG03G013180 vs. NCBI nr
Match:
KAG6656908.1 (hypothetical protein CIPAW_04G053800 [Carya illinoinensis])
HSP 1 Score: 147.9 bits (372), Expect = 1.3e-31
Identity = 93/261 (35.63%), Postives = 148/261 (56.70%), Query Frame = 0
Query: 1 MAKLFKCGRSSCSRLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYK----TNLLTH 60
M LFK S+ + + ++ +Y ++ ++L W IP +P ++IYK ++ L+
Sbjct: 1 MNSLFKPETSTVNTPLETENVNQEDYSIIDIERNLQDWTIPNVPKNQIYKYSTFSSKLSF 60
Query: 61 ISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVK 120
+++++ I T +K SL+ N + L KE KY IHIG+VQ+ VK
Sbjct: 61 LTNYT--IKTVEKTISLN------NDYESLQLLTKEA-IKHHKEQKYSFIHIGLVQVAVK 120
Query: 121 ALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNM 180
LTR LNA VLLCLRD RH N DSLLGMVE++L GP YFN +PN SLFDS++ +
Sbjct: 121 PLTRNGLNASVLLCLRDGRHYNFHDSLLGMVESSLFQGPVYFNCYPNYSLSLFDSNILHA 180
Query: 181 LFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSN 240
L L+ + + ++ +G + + ++YR+ YK +K + +AL+ S P G T+ Q+ S+
Sbjct: 181 LTLNIKTNGYHMM-KGSHPLTVVYRIHYKLMKTTLEPQALITS-PKGYTLLLQS---STP 240
Query: 241 NKNVLDQRVTVWDEVQLPENW 258
N ++ + W++V LP W
Sbjct: 241 NSSIQIPKQIHWNQVTLPNEW 247
BLAST of ClCG03G013180 vs. ExPASy Swiss-Prot
Match:
P05396 (Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 3.5e-08
Identity = 32/99 (32.32%), Postives = 50/99 (50.51%), Query Frame = 0
Query: 106 IHIGMVQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIV 165
IH G +++ +KA R+ +N+ + + L D R ++ QDS+LG NL G F F V+P
Sbjct: 119 IHFGAIKVLIKARFREGINSPIKMALIDDRITDRQDSILGAAHGNLVYGKFMFTVYPKYT 178
Query: 166 ESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCY 205
S+ D LD L +L+ +G + Y V Y
Sbjct: 179 TSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAY 217
BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match:
A0A0A0LXM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 111/268 (41.42%), Postives = 157/268 (58.58%), Query Frame = 0
Query: 11 SCS--RLSSSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHI----SSHSSLI 70
SCS H+L+ EY VEKGK L+ W +P +P KIY+ H S + I
Sbjct: 7 SCSSKNFVGDHSLEEEEY--VEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSI 66
Query: 71 ITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PL 130
T + S + GG L+ C + + +++++IG+VQIGVK LT+K P
Sbjct: 67 RTTEGQISFGNEGGSFKLY--GQTPSSYCRRRRI--SFFNTMNIGLVQIGVKTLTKKIPP 126
Query: 131 NAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEV 190
NA ++LCLRD R L+DSLL +VE+ L DGPFYFNVFPNI SLF S + N+L + V
Sbjct: 127 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 186
Query: 191 RDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQ 250
+ + +P+G IV+ R CYK + F + AL+ESP GKTVFFQ + ++ +V+ Q
Sbjct: 187 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPV-GKTVFFQIEIFEDDDDDVV-Q 246
Query: 251 RVTVWDEVQLPENWPPPPPGPDRTRVEF 272
+VT+W++VQLP +WPP P R+ F
Sbjct: 247 KVTMWNQVQLPSDWPPRLHIPTVPRLVF 266
BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match:
A0A0A0LZS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 5.2e-39
Identity = 102/235 (43.40%), Postives = 138/235 (58.72%), Query Frame = 0
Query: 18 SHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTNLLTHISSHSSLIITKQKNCSLSHGG 77
SH+LD+ EY ++KGK+LL W IP +PT+KIYK+N S I TK++ +G
Sbjct: 14 SHSLDSEEY--IKKGKNLLKWKIPKIPTTKIYKSNPFIFFS--DPFIKTKEETMPCENGS 73
Query: 78 GCLNLFCGADLWVKECNYAWLLSNKYHSIHIGMVQIGVKALTRK-PLNAKVLLCLRDARH 137
L G + + Y +++GM+QIGVK LT K P NA ++LC+ D R+
Sbjct: 74 QVFRLISGNPMVDN-----FQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIILCVFDTRN 133
Query: 138 SNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFDSDLDNMLFLSAEVRDFELLPEGPNNI 197
N +DS+LG+VE+ L DGP +FN+FPNI +F L L A V+ FE LP+G + I
Sbjct: 134 DNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQGTSPI 193
Query: 198 VLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQNDNGSSNNKNVLDQRVTVWDEV 252
LM+R CYK T AL+ES P GKTVFFQ + N V DQ+V+ WDEV
Sbjct: 194 SLMWRTCYKLQASALPT-ALIES-PQGKTVFFQT---NFENSKVADQKVSQWDEV 234
BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match:
A0A5D3D5V1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE=4 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30
Identity = 79/151 (52.32%), Postives = 99/151 (65.56%), Query Frame = 0
Query: 106 IHIGMVQIGVKALTRK-PLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNI 165
+++GM+QIGVK LT K P NA ++LC+ D R+ N +DS+LG+VEA L DGP +FN+FPNI
Sbjct: 31 LNMGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFEDSILGLVEAKLSDGPMFFNIFPNI 90
Query: 166 VESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGK 225
SLF L L L A V+ FE LP+G + I LM+R CYK F T AL+ES P GK
Sbjct: 91 TMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISLMWRTCYKLQGSAFPT-ALIES-PQGK 150
Query: 226 TVFFQNDNGSSNNKNVLDQRVTVWDEVQLPE 256
TVFFQ D N V Q+V+ WDEV E
Sbjct: 151 TVFFQTD---FENSKVAVQKVSEWDEVVCKE 176
BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match:
A0A5A7U9X3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29
Identity = 78/151 (51.66%), Postives = 98/151 (64.90%), Query Frame = 0
Query: 106 IHIGMVQIGVKALTRK-PLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNI 165
+++GM+QIGVK LT K NA ++LC+ D R+ N +DS+LG+VEA L DGP +FN+FPNI
Sbjct: 31 LNMGMIQIGVKTLTTKISSNASIILCVFDTRNDNFEDSILGLVEAKLSDGPMFFNIFPNI 90
Query: 166 VESLFDSDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGK 225
SLF L L L A V+ FE LP+G + I LM+R CYK F T AL+ES P GK
Sbjct: 91 TMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISLMWRTCYKLQGSAFPT-ALIES-PQGK 150
Query: 226 TVFFQNDNGSSNNKNVLDQRVTVWDEVQLPE 256
TVFFQ D N V Q+V+ WDEV E
Sbjct: 151 TVFFQTD---FENSKVAVQKVSEWDEVVCKE 176
BLAST of ClCG03G013180 vs. ExPASy TrEMBL
Match:
A0A7N2M3N6 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 92/278 (33.09%), Postives = 144/278 (51.80%), Query Frame = 0
Query: 1 MAKLFKCGRSSCSRLS--------SSHTLDNNEYDKVEKGKDLLTWNIPTLPTSKIYKTN 60
M KL++ S SR S HT+D+NE D W IP + T IYKT+
Sbjct: 1 MDKLWRSNSSISSRTSCPPDIVNEEDHTIDDNELI-----PDFRKWTIPKVDTKTIYKTS 60
Query: 61 LL--THISSHSSLIITKQKNCSLSHGGGCLNLFCGADLWVKECNYAWLLSNKYHSIHIGM 120
+ T S++ + I + + S H C L+ K+ +L + K++ +HIGM
Sbjct: 61 FVESTFHSAYKARTIEQIFSISRIHEKCC--------LFTKKNINDFLPAKKFYYLHIGM 120
Query: 121 VQIGVKALTRKPLNAKVLLCLRDARHSNLQDSLLGMVEANLRDGPFYFNVFPNIVESLFD 180
VQ+ +K LTRK +NA VL+CLRDAR +DS+LGM+ A+L DGP YFN +P++ +L D
Sbjct: 121 VQVAIKPLTRKGINASVLMCLRDARFKIFKDSILGMITASLYDGPVYFNCYPDLTLALDD 180
Query: 181 SDLDNMLFLSAEVRDFELLPEGPNNIVLMYRVCYKAIKLGFKTRALLESPPNGKTVFFQN 240
++ L L+ + + EG L+YR+ YK + A++ P+GKT+ Q
Sbjct: 181 PNIVKALTLNIASSGYH-MEEGSKPFALIYRIYYKLMGTQMNPCAIMPREPSGKTMLIQ- 240
Query: 241 DNGSSNNKNVLDQRVTVWDEVQLPENW------PPPPP 263
S+ + + ++ W +V+LP++W PP P
Sbjct: 241 --CSTPDAKIQVPKMIQWQDVKLPKDWLLEQETPPTKP 261
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6588193.1 | 6.6e-89 | 68.87 | hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6590198.1 | 6.1e-42 | 41.83 | hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN66493.1 | 8.8e-41 | 41.42 | hypothetical protein Csa_007053 [Cucumis sativus] | [more] |
KGN66494.1 | 1.1e-38 | 43.40 | hypothetical protein Csa_006902 [Cucumis sativus] | [more] |
KAG6656908.1 | 1.3e-31 | 35.63 | hypothetical protein CIPAW_04G053800 [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
P05396 | 3.5e-08 | 32.32 | Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LXM3 | 4.2e-41 | 41.42 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1 | [more] |
A0A0A0LZS0 | 5.2e-39 | 43.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1 | [more] |
A0A5D3D5V1 | 3.4e-30 | 52.32 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE... | [more] |
A0A5A7U9X3 | 2.9e-29 | 51.66 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 P... | [more] |
A0A7N2M3N6 | 1.1e-28 | 33.09 | Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |