ClCG03G013130 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCGGCGCTCGCGTTCTCTGTTCAGCGTCCATTCAACCGTTGGTCCGGCACCAGAAGCCCAGATCGGTCATCTGTTCACCAGCGTTCACAACAATGTTCTCCGTTCAGGTTCACCAGCCCTCATAGCTAAAATTTTGTCTGATTTTGTAGGAAAGCCGAGAGCATTTTCCCCGAGGAACTTCCGAAGTAAGTTTACCCACAAATTTCCCCCCCATTTAATTAGTGTCTTTCTACTGCATTGGTTGATTTCAGGTGGTGTTAATTGGGTTTTTGTTGCTTTCCTTCATAATGTGTGAAAGTTATTTTCTAGTTCACGGCCTCGTAGTAACCATTTCGTTTTTTCTTGTTTTTGAAAATTAAGTCAATGATTTGCCTCTTTTGAATTCTTAACCAAATACTAAAAACAAAAACTTGAAAAAGCTTTTTATTTAGTTTTCAAATTTAGACTTTGGTTTTAAAAACTAGATGCATGATAGCAAGGTGCTCCCCGATGTTTGAAAACCCACCCACGACTTTAATTGTTGTTACTTCTGTCGGAGCTATGACATTATTCCTTGCAACAACCACGAGAATATTATAAAACAATCTAAAGAGGGTCATAGCTTATTTAAAGTAAAAATTCTAAAGAGCGTCATAGCTTATTTAAAGTAAAAAATCTAGAGGTGAAAGAGGTGTTTGTAGGCTTAATTTTCAAAAACTAAAAACTAAAAATCAAATGATTATCCAATGGAGCCTTAACTTTAATGGAGATTTTTATATGGATACCAAATTTGGTTTTCTAATGCAAATGGCCCGAGTTCTGTAAATAATAAAAATTAACATTTTGCTTACGTATCAACATTAAATTTTCCCTTCACGATGTCAAACCTGATGCCATTTCACCTTTGAGAAAGGTCATAAGATCCCAAAATTTTAATGGATGAGAATTTTTACTTTTATAAAAATTGCAATGCACCCTGAAATCATGTTCGGGGTCTCATTGATTCGCGATTTGCCACGAATAAGCTCTAGGGAGAATGTAATGTTGGTTGGTGCTTTATGACGTAAGCAAAAGGTTAGTTGGGTCGTTAAGCACAACTAAATTTGGGTACAAAAATCTCTGTCCTGTCTGAATTAATTTTAAGGACTGTGGTTAGAATGGTTACAATGTTGTGCATTTGAACCTATTCGCTGATACGTTGAGATCTCTTTACTCGCTGCATATTGTAGAATGGCTTCTTATTTCTCTCTTTTTGGCTGTATCACTTTTTCTTATATATGTAAACTGATCTTCCAGCATGTCAATATATCATAGCTCTTGAATCATTCATTATATGACTTATCCTTTTCTGCCTTAAATTTTCAATTAATGTAGAAATGATAGCGGTGTTCATTGTTTGTTGAACTTTTGATGTTTAAGATGGTTAGCAAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGACACAGAAGAAGCCTTTGCTAATGAGAATTTTAATTGA CCTCCGGCGCTCGCGTTCTCTGTTCAGCGTCCATTCAACCGTTGGTCCGGCACCAGAAGCCCAGATCGGTCATCTGTTCACCAGCGTTCACAACAATGTTCTCCGTTCAGGAAAGCCGAGAGCATTTTCCCCGAGGAACTTCCGAAATGGTTAGCAAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGACACAGAAGAAGCCTTTGCTAATGAGAATTTTAATTGA CCTCCGGCGCTCGCGTTCTCTGTTCAGCGTCCATTCAACCGTTGGTCCGGCACCAGAAGCCCAGATCGGTCATCTGTTCACCAGCGTTCACAACAATGTTCTCCGTTCAGGAAAGCCGAGAGCATTTTCCCCGAGGAACTTCCGAAATGGTTAGCAAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGACACAGAAGAAGCCTTTGCTAATGAGAATTTTAATTGA PPALAFSVQRPFNRWSGTRSPDRSSVHQRSQQCSPFRKAESIFPEELPKWLARAIKSFAMAELEARKLKYPNTDTEEAFANENFN Homology
BLAST of ClCG03G013130 vs. NCBI nr
Match: XP_008439115.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 68.2 bits (165), Expect = 4.0e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. NCBI nr
Match: KAA0033572.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] >TYK30329.1 ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 4.0e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. NCBI nr
Match: XP_022968478.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 67.4 bits (163), Expect = 6.8e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. NCBI nr
Match: XP_022945169.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 67.4 bits (163), Expect = 6.8e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. NCBI nr
Match: KAG6574124.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.4 bits (163), Expect = 6.8e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy Swiss-Prot
Match: Q93WL3 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.8e-07 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy Swiss-Prot
Match: Q8GW78 (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06 Identity = 25/29 (86.21%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy TrEMBL
Match: A0A5D3E3F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00010 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy TrEMBL
Match: A0A1S3AY13 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484006 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy TrEMBL
Match: A0A6J1HY47 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467707 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy TrEMBL
Match: A0A6J1G082 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449490 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08 Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. ExPASy TrEMBL
Match: A0A6J1J1K1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482587 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.3e-08 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of ClCG03G013130 vs. TAIR 10
Match: AT4G25370.1 (Double Clp-N motif protein ) HSP 1 Score: 54.3 bits (129), Expect = 5.6e-08 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of ClCG03G013130 vs. TAIR 10
Match: AT4G12060.1 (Double Clp-N motif protein ) HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07 Identity = 25/29 (86.21%), Postives = 25/29 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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