ClCG03G013080 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G013080
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	exosome complex component RRP45A-like
Location	CG_Chr03: 26971635 .. 26979039 (-)
RNA-Seq Expression	ClCG03G013080
Synteny	ClCG03G013080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAGAAACCCTAAAACTTTGAATTATTCTGCATTCCCTCTCCCTCGCGCGCAAGTCCTAGCAGTAGCACTCCATTGATCTTCCAACCTCACTCGGACGGCGGCAGAACAATCGGACCACGACGGCAGAACGATCGGACGGGTTGGACAGCAGCAGCTGCGGCGGCGGCGCGTTTCCTTGACGTGGACAACGGTGAACACGCGTTTCGGCGACGTGGACAACCACTTCTTGGCAACTTCTTACTCAAACTTCAACTATTGTAAGGAACTTAACCCTTCATTTTGACTTGTTATAAAATTTCTATTTCTTTTAGAAATTTGGGTTTACTGATTTTTGTTATTTTTTTAAGATTATTCTTTCCTGATTTTTGTTGTATTTTTTTTTTTCTTTTTGGTGGTTTCTGATTTTTTTTTTTTTATTGAGTTTTCTGATTAGTATATTTATATTGGCTGTCAAAATGGAAGCGTAAGGTTTACTTTGCTTTGCCTGTTGTGAATATTATTGTTGGTTAGTGTTCTTTTGTAAACACAACCGCTGCTCCACATTTAGGTGTTATTTTTTATCTTTCAAATATCTCACCCAAACACAAAAACTTGTAACCACCACTTCTAACTCATTGTGGGCACATTTATATGCATCTTTTAAGTGATTTAGAGTGGGTATAGAAGACATTAGGAAGGTTTTCAAAATCATTTTAGGTTCTATTTTTTATCCTGCAACATCTCGCAACAACTTCCAAACTTGAACCACTCAATTTGAAATCATTTTTAAACTCATTTTTATACATGTTTTAGGTGATTTAGGATGGATATGAGCATTTTTAGCTAGCCATTTAGGTATTACTTTTTATCTCACAAGCTAGCTTTTTAGTTATTATTTTTTATCTCGCAACAACTTTTAAATTTGAAACACTCAGTTGGAACTCATTTATATAGGTGTTTTATGGTGGGTATGGACACTTTTAGGTTGTTTTTTATCTCGCAACTTGCAAACTTGAAACACTCAATTGAAATTCGTTTTTACAGTTGCTTTAGGGTGGGTATGCACATGTTTTAGGTAGTTTCTTAGCTATTGTTTTTTTTTATCTTGGAACATATCACACTATCTCGCAACAACTTCCAAACTTGAAACTCTCAATTGGAACTCATTTTTATAAGTGTTTTAGGTGATTTGGGGTAGGTTTAGACATGTTTTAGATGGTTGTTTGGGTATTGTCTTTTATTTCGCTAACATCTCACAACAACTTTCCATCTTCCAAACTTGAAATGCTCAACCCTAAATCATTTTTGTTTACTTTTTATAGATGGGTAATTAGTGTGAACTTACTGCTAATTCATTACGTTATTTTTTATCGTTAAGTTTGGGTTGGAAATTTAGTGTTGGACTGATATTATTATTATTATTATTTGTTTTTTCTGGATAAGAAACAATTTCATTGATTGAATGAAATATCCAAAGATGTCCAAAGGTACATGAGGAGCCCGTTCAATGGAAATACAAAAGGAACCCAGTCAAAGGGTGTACAAAAGATGTTTCCAATTAGCAACAAGGAAAGAAAAATTATGACAATATATAGCCGGTATATCTTTGCACCAAAAAAAAAGCATTATGAATGATAGTGTCAATAATATCCGTTGCTGTCTTGTTCTTATCCTGGAAGATTCTTTCATTCCTTTCATCCCGTATCTTCCACAAAACAACACAAATAATGCTAAGCCACAGACGTTCTTTGTTGGCTTTGAAAGGTGTCCAAAAAATCAATAAGTGAAGCCAACTCTGTATATGATTGCGGCAAGCAACAGTTCAATTGGACGCAGTAAAAAATTCTGTCCAAATCCCTCTAGAATGTGGGACAATCAAAGAAGACATGTCGGATAGTTTCATTGTTGGTATGGCAAAGGCTGCACCATGAGGGAGATAGGTTGATCCATGGGCAACGTTTCTGTAACCTGTCCATGGTGTTGAGACAGGAATTTGAGATTTCCCAAATGGAAAATTTCACTCTTTTTGGACAGGGGCAACTCCAAAGTTTTTTGTTCAAAACAACCGTAGATGTGTGTCTATTGGATGAGAGGAAAGTGTAGTATTGAAGCCATTAGAATCAAGCTTCCATGTCCATTTGTCCCTTCTGTTGGTGAGGTTCAGATTTGGAAGGAGATGGGTGAATTCAGCCCATTCCAAGATCTCATTATCCTTTAAATTTCTTCTAAAATTAAGGGACCAAAAGCAATGATCAGTGTTCCACACCTCTTCAATAGATGCATTTTTTGAACCTGCTAGCCGATAGAGCTTGGGAAATTTCTGTTGAAAAGTGTAGTCTGCAAACCAAGAGTCATGCCAAGAAGCTGTAGTTGATCCATTCCCGATGGCACATTGAATATTCCCATAAACAAGATCTTTCTGTACTAGAATGTATTTCCATGGACTTGAAAATACTTTTAGAGGAATTGTGTTTATATTCAGTTGCAATAAGGTCAAAATGTTGAGAACCATACTTGGCTTAGATCAATATCCTCCATAGAGCCTCTTTTTCAAGATGAAAATGCCAAATCCATTTTTCAAGAAGGGCATTGTTTTGCTGTTTAATATCTGTGATCCCCAGCTCTCCTTCAACCAAGGGTTTCTTCAATTATCCCACTTTAGTAAATGAGAAAGCTTGCTGTCTCTATGCCCTGACCATAGGAAATTTCTAAACCTCCTTTCAATGCCATCAATAATTATAACAGGGGCTTTGTAAAGAGACAAAAATTATATAGGTTGATTGGATAATGTGTCCTTCAATAGGGTTAGTCTAACACCTTTGGAGAGAAATCTATGTTGCCATGAGTGGAGTCTGTTGTCAGTTTTGTCCATGACCGGCTGCCAAAAAGATAAAGATGTAGGTTTACCAAATAATGGAAGCCCCAGGTAAGTGGTCCTTAGTGGTTTAATTAAATTGAATGTTTCCTTTAAGTTAAGTTGGATCACATCAGTTATTCAGGTGTTTTGTTTAATCTTGTAAGTTTCAAAATATTTGGTCTTGTTCAGGTTAGATTAGTATGTAAGTTTGTTCCAGTTGCCTCTGAATGGTGAACTTGAGTTAATTAGGTAAAAAGTTTGGTAATGTCTCCTTAATTCAATACAAAGTTTGGGGGCGTTACATAGGAAGTTGGGTTGTTACGAAATCAGACCCACAAGAAATCCTTACTTGTTCCTTCAATTGTTCGGTTGTTTTAGTCTGTGGTGTGCTCTTCTTCATCACCTTAACATAATACTGATAGAATACCTCTCTAATGTCATAGTTTGAATTTGCAGTAAAAAGGGTGTACTAAATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATTGAAACAGCCCTACTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGTAATGTTTCTCATATGTTTTGTTTTGTTTCACACTATGTATTTTCCCCTTCTGGTGTGGTTTTTGTGGTTGGTGATAATAATGAATTTTGTGCAGGGATGATGGCTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGATTTGTGACTGCTCAGCTAGTTCAGCCGTATAGGGATCGTCCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCTATGGCTGATCCCTCATTTGAGCCTGGCCGTCCGGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGTAATTATCTTTTTGGTTCCTTAACTATCAATCTAAATCCTGTTGTGTTGACTAACTAATAGATAGAGAATAAATTAAGCACAATCCTTTTCTCAAGCTTCACAGTCAACAAGTAACCTATTACATCAATCCATACACAGCAATCTAAGGTTGGAAGTATTAATGTAGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGGTAAGCTTTTGAATTTTTATTTTATTTTGTTTTGCACATTGTTATAATGGTGCTAATTTATGGTATTTAACAATCCTGCAAGCAGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTGTCAACTTTTCGAAGACCCGAGTGTTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATCCCCCTGAGGTAATCTCTTCAAAATTTTCTTGGAAGTTAACTTGAAGTGCATCCTGTTCAAAGGATGTGACATTATTTACTTAAATACATGATGTTATATACAAACACAACTATCCCATATCTGAGCAGTTTTATGTACTGTAAATGTCAAACATTCTGCTTGACATCTTCATGTTTATCCATGGTCTTAGATTTATTTATTTATTTATTTTCTTGTGAAACAAACAATAACGTTTGGGTTTATCTTCTATCATAGCTGCCTGTATCCTTGAATGTATTATAGGGATGTTGCTGTTTGACAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTGTTGCAGTAACCTTTGCATTTTTCCGTAGTGAGAGCACTCTGGTAAGCTCAAGTTCTTTCAATGTGTTGTGTAAAGAGTTCAGTTATATAGCAGGGTTTTTTAAATTTTGGGGTGCTGTGCAGGTGATAGATCCTACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACTGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCATGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTGAGATTCTTTTTGAATAAGACTTAATGATGTAGCATCCTACTCTTTTTTCCCTTTTACTCATTTCAACCACAATTTTATGTTAGGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAACGTCACCCTTCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAGGGCATATCTGATGATCGAAAGAGTATCAATGATCTTTCTGAAAGATTGAAATTAAATTCTGAAGAGAGTATCGCCAGTCAAAGCGGGAGTATTAAGAGTGATGTATCAACAAATCAAGGACAAATAAACAAGAGAGATTTTGATGATAAGAATTTCATCGGGGGCCCTTCATGCTGGTAAGGTGTTACCTTGATTATGGTGCATATAAGTTTTAGCCAATTTATGTTCACAGTATGACTTTTTCTCTTATTTAATGTGTTCTTCCCCAAAAGGAAATCTTAGGTATGAGCTGAAGTTTTGCAATCAATATTTTACACGGTACACTGATATATATGCCATTTGACAGTGTTGTCTTCAGAATTTTTTTTGTAACCTCCCTTTTCTTTTTCCTAGGGACCCATACTCGAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGTACTTCTTCACTGAGACCCTATAATTTTTATTTTTGCTTTAATTTTTTTAAAAAGATCATTTTTATACTTTTCTCTAAAACAGCTCCTCCATATCCATTTTCTCCCTGTAGTATATATGAATTAAGTATGGATGTTATCTTAATTAGTCTTCAATATTATTGGCTGCAACTTCATTTGGTGACTGATGCAGGAAAGTTTTAAAATTTGTGCTCTATGGCTGTCTTGAGGGATACTTTTTTGCAATTATGGCTTTCAATAATGCAGAAAAGTCATATAAAGAGCATGCAAGAAGAATGAACATTGAGAGAGGGAAGTTATAGGCATAAACAATTAATACTTCAATGCGATTCATCTTTTTTTTATTGAATCTTAATTTTGATTAGTTGAAATATGCTTATTTTATTTTATAAAGGCTCACCACGTGTTACCAACCTGAGTATCACTCAATTGATTAAGAAGAGGTTAGAGGCTTAAATCTCCGCTCCAAATGTTGCATTGAGCCCAGGGAAAATAAAAAACCTTGCCTGTTCCCTTGAGAGGATTGTGAAAGAAGACCACCAAAGCAACTGGAAAATCTGCAGGCATTATGATTTTGGAATGGTTAGGTTGAAGACTTTTTGAACAAAAAATTCCTATTCAGGCTAAATCTTAGAAAAGTTGGTTAAAGTAAAATTTATGAGAAAATCAATTGAAATGAGGATGGATGAAAATAAATGTTAACTTTGGAAACTTCATACCTTCTCTGTTCTTCTAAAGATAGAGAGAGGGCACAAAAACTGTGGAAGAGCTGGAAGGACTATTCGTTGGAGGCATTTCTATTTCAGGAACAAAATCTAAGCAGATTAGATGTTATTCAGTAAAATTTATTCTTTTATTCGCTTAGTTTCAATTTAGTCATCTTGCACTAGCATAGCTTCCTTTGTGTGCACAAGTACAGAAGTTTACTTTCAATCAACTGGTCTACCTTTTCTTATGCTAGCTTGTTGCAGGAAATCTAACTGCGACAAAGAAACAGAACCTAAGTGATGAAATGATATCCTCCGAGACTAAGGGTGATGAACAAGAAGCCAAAGTTGATCAGACAAATTTACCTGCTGTTGCTGCTAAAACTTTGTCAGAAGAAGACGGGAAGAAGACTTTGAAAGATGCTGTGAAGCCAAAGAATAAGAGGAAAAAGAAGAAGACCACCACCCCTAACGATGCAGATTAGTTCACTGGTGACATAATCTTTTGAAATGTATGTTTTGGAAATTGACCTATTAACCTCAACCAACAACCCCCCTGTTCTTTTCCTTCTCATGATTCTTCCATATATGTTTGTTTTGTGTTCTTTGGTTTTTGAAAATATCTCTCAATTGCAATTTTCTTTTTATAGTTTTGTGAAGATGTAAATTTTGAAGCTCAACTTCAAAGTACTTAGAAGGGTGATATCAATTGAAGCAAAGAGAAGCATCGAGAAGGTTTGTGCCAGGTTTCATCAATGTTCGTCGGAAAAATTCAGAACTTGAGCTTGTTGAGATCCAATGAAATCTGGATTTGGTTGAGTTCTATTCACTGAGAAATCTATATGATGATGCTGTTGAAAAAGGCATTATACCATGGATATGCAATTTCAGGATCTTTACTTAGAGTAACATAGAGTGTTTAGTTTCTAAAGAATCTTAGAAAGTTTTGAATTTCTCTCTTCTAACTATTGTTATTTATTATTATTATTGTAAGTTTTGGATTTTCAGTAATGTTGAGGGAACTTTATTTCCTCATATTATATTGATTGTAAACCTTTTCATAGGCATATTTAAGGGAAAAACAATGCTAGTCATTGAAATTTCTCTCCCCACCCAGATGGAGTTGACTTGCAACTTAACTTGTAAGTTATATGCAATAATATTTTTAAGACAAT

mRNA sequence

CGAAAGAAACCCTAAAACTTTGAATTATTCTGCATTCCCTCTCCCTCGCGCGCAAGTCCTAGCAGTAGCACTCCATTGATCTTCCAACCTCACTCGGACGGCGGCAGAACAATCGGACCACGACGGCAGAACGATCGGACGGGTTGGACAGCAGCAGCTGCGGCGGCGGCGCGTTTCCTTGACGTGGACAACGGTGAACACGCGTTTCGGCGACGTGGACAACCACTTCTTGGCAACTTCTTACTCAAACTTCAACTATTTAAAAAGGGTGTACTAAATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATTGAAACAGCCCTACTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGGATGATGGCTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGATTTGTGACTGCTCAGCTAGTTCAGCCGTATAGGGATCGTCCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCTATGGCTGATCCCTCATTTGAGCCTGGCCGTCCGGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTGTCAACTTTTCGAAGACCCGAGTGTTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATCCCCCTGAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTGTTGCAGTAACCTTTGCATTTTTCCGTAGTGAGAGCACTCTGGTGATAGATCCTACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACTGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCATGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAACGTCACCCTTCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAGGGCATATCTGATGATCGAAAGAGTATCAATGATCTTTCTGAAAGATTGAAATTAAATTCTGAAGAGAGTATCGCCAGTCAAAGCGGGAGTATTAAGAGTGATGTATCAACAAATCAAGGACAAATAAACAAGAGAGATTTTGATGATAAGAATTTCATCGGGGGCCCTTCATGCTGGGACCCATACTCGAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGAAATCTAACTGCGACAAAGAAACAGAACCTAAGTGATGAAATGATATCCTCCGAGACTAAGGGTGATGAACAAGAAGCCAAAGTTGATCAGACAAATTTACCTGCTGTTGCTGCTAAAACTTTGTCAGAAGAAGACGGGAAGAAGACTTTGAAAGATGCTGTGAAGCCAAAGAATAAGAGGAAAAAGAAGAAGACCACCACCCCTAACGATGCAGATTAGTTCACTGGTGACATAATCTTTTGAAATTTTTGTGAAGATGTAAATTTTGAAGCTCAACTTCAAAGTACTTAGAAGGGTGATATCAATTGAAGCAAAGAGAAGCATCGAGAAGGTTTGTGCCAGGTTTCATCAATGTTCGTCGGAAAAATTCAGAACTTGAGCTTGTTGAGATCCAATGAAATCTGGATTTGGTTGAGTTCTATTCACTGAGAAATCTATATGATGATGCTGTTGAAAAAGGCATTATACCATGGATATGCAATTTCAGGATCTTTACTTAGAGTAACATAGAGTGTTTAGTTTCTAAAGAATCTTAGAAAGTTTTGAATTTCTCTCTTCTAACTATTGTTATTTATTATTATTATTGTAAGTTTTGGATTTTCAGTAATGTTGAGGGAACTTTATTTCCTCATATTATATTGATTGTAAACCTTTTCATAGGCATATTTAAGGGAAAAACAATGCTAGTCATTGAAATTTCTCTCCCCACCCAGATGGAGTTGACTTGCAACTTAACTTGTAAGTTATATGCAATAATATTTTTAAGACAAT

Coding sequence (CDS)

ATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATTGAAACAGCCCTACTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGGATGATGGCTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGATTTGTGACTGCTCAGCTAGTTCAGCCGTATAGGGATCGTCCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCTATGGCTGATCCCTCATTTGAGCCTGGCCGTCCGGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTGTCAACTTTTCGAAGACCCGAGTGTTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATCCCCCTGAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTGTTGCAGTAACCTTTGCATTTTTCCGTAGTGAGAGCACTCTGGTGATAGATCCTACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACTGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCATGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAACGTCACCCTTCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAGGGCATATCTGATGATCGAAAGAGTATCAATGATCTTTCTGAAAGATTGAAATTAAATTCTGAAGAGAGTATCGCCAGTCAAAGCGGGAGTATTAAGAGTGATGTATCAACAAATCAAGGACAAATAAACAAGAGAGATTTTGATGATAAGAATTTCATCGGGGGCCCTTCATGCTGGGACCCATACTCGAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGAAATCTAACTGCGACAAAGAAACAGAACCTAAGTGATGAAATGATATCCTCCGAGACTAAGGGTGATGAACAAGAAGCCAAAGTTGATCAGACAAATTTACCTGCTGTTGCTGCTAAAACTTTGTCAGAAGAAGACGGGAAGAAGACTTTGAAAGATGCTGTGAAGCCAAAGAATAAGAGGAAAAAGAAGAAGACCACCACCCCTAACGATGCAGATTAG

Protein sequence

MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVGGGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDVSTNQGQINKRDFDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD

Homology

[Close]

BLAST of ClCG03G013080 vs. NCBI nr
Match: XP_038879556.1 (exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879557.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879558.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 842.4 bits (2175), Expect = 1.8e-240
Identity = 431/453 (95.14%), Postives = 441/453 (97.35%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQ+VQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQIVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDVSTNQGQINKRDFDDK 360
            GAANLK SQGISD RKSIND+S+RLKLNSEESIAS S SIKSDVSTNQGQ+NKRDFD K
Sbjct: 301 EGAANLKHSQGISDGRKSINDVSDRLKLNSEESIASPSRSIKSDVSTNQGQLNKRDFDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQT 420
           NFIGGPSCWDPYSKGVDSDFLKATLASRGNLT TKK+N SDEM+SSET+ DEQE KVDQT
Sbjct: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKENPSDEMMSSETEVDEQETKVDQT 420

Query: 421 NLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKK 454
           NLP  AAKTLSE++GKKTLKDAVKPKNKRKKKK
Sbjct: 421 NLPPAAAKTLSEDNGKKTLKDAVKPKNKRKKKK 453

[Close]

BLAST of ClCG03G013080 vs. NCBI nr
Match: XP_022988100.1 (exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome complex component RRP45A-like [Cucurbita maxima])

HSP 1 Score: 816.2 bits (2107), Expect = 1.4e-232
Identity = 419/462 (90.69%), Postives = 438/462 (94.81%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGS+EVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDV-STNQGQINKRDFDD 360
              AN KDSQG+SDD+KSIN+ S+RLKLNSEE+IA QS SI+SDV STNQGQ+NKRD D 
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ++SDE +SSETK DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
            NLP VAAK LSEE+ KKTLKDAVKPKNKRKKKKTT PN AD
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of ClCG03G013080 vs. NCBI nr
Match: KAG7023846.1 (Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 805.1 bits (2078), Expect = 3.2e-229
Identity = 418/462 (90.48%), Postives = 433/462 (93.72%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDV-STNQGQINKRDFDD 360
              AN+KDSQ      KSIN+ S+RLKLNSEESIA QS SI+SDV STNQGQ+NKRD D 
Sbjct: 301 RAVANMKDSQ------KSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSETK DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
            NLP VAAK LSEE+ KKTLKDAVKPKNKRKKKKTT PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 456

[Close]

BLAST of ClCG03G013080 vs. NCBI nr
Match: KAG6590195.1 (Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 800.4 bits (2066), Expect = 8.0e-228
Identity = 418/463 (90.28%), Postives = 433/463 (93.52%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDV-STNQGQINKRDFDD 360
              AN+KDSQ      KSIN+ S+RLKLNSEESIA QS SI+SDV STNQGQ+NKRD D 
Sbjct: 301 RAVANMKDSQ------KSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSETK DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTT-TPNDAD 462
            NLP VAAK LSEE+ KKTLKDAVKPKNKRKKKKTT  PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of ClCG03G013080 vs. NCBI nr
Match: XP_004139042.1 (exosome complex component RRP45A isoform X1 [Cucumis sativus] >XP_011660140.1 exosome complex component RRP45A isoform X1 [Cucumis sativus] >XP_031745436.1 exosome complex component RRP45A isoform X1 [Cucumis sativus] >KGN66502.1 hypothetical protein Csa_006963 [Cucumis sativus])

HSP 1 Score: 798.9 bits (2062), Expect = 2.3e-227
Identity = 412/461 (89.37%), Postives = 431/461 (93.49%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLSANEKKFIETALLSDLRVDGR PFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAAN+AALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLP+AVTFAFFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDVSTNQGQINKRDFDDK 360
           GG  +LKDSQGISD +KSIND         +ES+ SQSGSIK+D STNQGQ++KRD D K
Sbjct: 301 GGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKNDASTNQGQLDKRDSDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQT 420
           NFIGGPSCWDP+SKG DSDFLKATLASRGNLTATKK++LSDEM+SSE+  DEQEAKVD+ 
Sbjct: 361 NFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDEV 420

Query: 421 NLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
           NL  VAAKTLSEE+GKKTLKDAVKPKNKRKKKKTTTP D D
Sbjct: 421 NLSPVAAKTLSEENGKKTLKDAVKPKNKRKKKKTTTPIDVD 452

[Close]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot
Match: Q9M209 (Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.8e-142
Identity = 276/464 (59.48%), Postives = 338/464 (72.84%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLP+A TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDDRKSINDLS----ERLKLNSEESIASQSGSIKSDVSTNQGQINKR 360
            G    +K+    S D++   ++S    ERLKL++EE  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTATKKQNLSDEMISSETKGD 420
           + +  NF GGPS WDPYS+ +D D LK +LASRG+     ++TKK N S         G+
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGS---------GN 420

Query: 421 EQEAKVD---QTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKK 453
            Q+  V+   +     +  K    +DG+ TLKDAVKPK KRK K
Sbjct: 421 AQKVGVEISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot
Match: Q9LDM2 (Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.8e-121
Identity = 210/292 (71.92%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLP+A TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot
Match: Q06265 (Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-67
Identity = 126/275 (45.82%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+ GD   EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGD---EVTLYTPEERDP 185

Query: 191 LPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+P+ V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  +++C +IA VK  +IT  I  A+E     R+
Sbjct: 246 LKDQVLRCSKIAGVKVAEITELILKALENDQKVRK 277

[Close]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot
Match: Q9JHI7 (Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-67
Identity = 125/275 (45.45%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+    G+EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSV---QGEEVTLYTPEERDP 185

Query: 191 LPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+P+ V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot
Match: Q4QR75 (Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-67
Identity = 125/275 (45.45%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+    G+EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSV---QGEEVTLYTPEERDP 185

Query: 191 LPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+P+ V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL
Match: A0A6J1JG94 (exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC111485448 PE=3 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 6.8e-233
Identity = 419/462 (90.69%), Postives = 438/462 (94.81%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGS+EVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDV-STNQGQINKRDFDD 360
              AN KDSQG+SDD+KSIN+ S+RLKLNSEE+IA QS SI+SDV STNQGQ+NKRD D 
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ++SDE +SSETK DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
            NLP VAAK LSEE+ KKTLKDAVKPKNKRKKKKTT PN AD
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL
Match: A0A0A0M072 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227
Identity = 412/461 (89.37%), Postives = 431/461 (93.49%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLSANEKKFIETALLSDLRVDGR PFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAAN+AALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLP+AVTFAFFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDVSTNQGQINKRDFDDK 360
           GG  +LKDSQGISD +KSIND         +ES+ SQSGSIK+D STNQGQ++KRD D K
Sbjct: 301 GGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKNDASTNQGQLDKRDSDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQT 420
           NFIGGPSCWDP+SKG DSDFLKATLASRGNLTATKK++LSDEM+SSE+  DEQEAKVD+ 
Sbjct: 361 NFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDEV 420

Query: 421 NLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
           NL  VAAKTLSEE+GKKTLKDAVKPKNKRKKKKTTTP D D
Sbjct: 421 NLSPVAAKTLSEENGKKTLKDAVKPKNKRKKKKTTTPIDVD 452

[Close]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL
Match: A0A6J1HA43 (exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461486 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227
Identity = 416/463 (89.85%), Postives = 433/463 (93.52%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESA+ELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAIELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLP+AVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDV-STNQGQINKRDFDD 360
              AN+KDSQ      KSIN+ S+RLKLNSE+SIA QS SI+SDV STNQGQ+NKRD D 
Sbjct: 301 RAVANMKDSQ------KSINEFSDRLKLNSEDSIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSETK DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTT-TPNDAD 462
            NLP VAAK LSEE+ KKTLKDAVKPKNKRKKKKTT  PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL
Match: A0A1S3BP69 (exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492017 PE=3 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.5e-224
Identity = 412/461 (89.37%), Postives = 430/461 (93.28%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLS NEKKFIETALLSDLRVDGR PFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSVNEKKFIETALLSDLRVDGRCPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLP+AVTFAFFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSDVSTNQGQINKRDFDDK 360
           GGA +LKDSQGISD  KSIND         +ESI SQSGSIK+D STNQGQ++KRDFD K
Sbjct: 301 GGAGSLKDSQGISDGEKSIND---------QESIVSQSGSIKNDESTNQGQLDKRDFDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQNLSDEMISSETKGDEQEAKVDQT 420
           NFIGGPSCWDP+SKGVDS+FLKATLASRGNLTA KK+++SDEM+SSE+  DEQEAKV + 
Sbjct: 361 NFIGGPSCWDPHSKGVDSNFLKATLASRGNLTAMKKEDMSDEMMSSESMVDEQEAKVGEV 420

Query: 421 NLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
           NL  VAAKTLSEE+GKKTLKDAVK KNKRKKKKTTT  DAD
Sbjct: 421 NLSPVAAKTLSEENGKKTLKDAVKRKNKRKKKKTTT-IDAD 451

[Close]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL
Match: A0A6J1DLD8 (exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021616 PE=3 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.6e-218
Identity = 406/466 (87.12%), Postives = 429/466 (92.06%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEHRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLEGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLP+AVTFAFFRSESTLV+DPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVVDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQS+IMQCLRIA VKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSMIMQCLRIASVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 G---GAANLKDSQGISDDRKSINDLSERLKLNSEESIASQSGSIKSD-VSTNQGQINKRD 360
           G   G AN+K+SQG+SD +KSIN+ S+RLKLNS+ES+ASQSGS +SD VSTNQGQI KRD
Sbjct: 301 GGVAGVANMKNSQGVSDGQKSINEFSDRLKLNSQESMASQSGSTESDIVSTNQGQIIKRD 360

Query: 361 FDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTATKKQ-NLSDEMISSETKGDEQEA 420
            D KNFIGGPS WDPYSKGVDSD+LK+TLASRGN T  KKQ + S E +SSE  G  ++ 
Sbjct: 361 LDAKNFIGGPSSWDPYSKGVDSDYLKSTLASRGNPTMMKKQKDSSVETMSSEELG--EQV 420

Query: 421 KVDQTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKKKTTTPNDAD 462
           K +Q +LP  AAKTLSEE+ KKTLKDAVKPKNKRKKK  +TPN AD
Sbjct: 421 KDNQADLPLAAAKTLSEENRKKTLKDAVKPKNKRKKK--STPNVAD 462

[Close]

BLAST of ClCG03G013080 vs. TAIR 10
Match: AT3G60500.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 507.3 bits (1305), Expect = 1.3e-143
Identity = 276/464 (59.48%), Postives = 338/464 (72.84%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLP+A TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDDRKSINDLS----ERLKLNSEESIASQSGSIKSDVSTNQGQINKR 360
            G    +K+    S D++   ++S    ERLKL++EE  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTATKKQNLSDEMISSETKGD 420
           + +  NF GGPS WDPYS+ +D D LK +LASRG+     ++TKK N S         G+
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGS---------GN 420

Query: 421 EQEAKVD---QTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKK 453
            Q+  V+   +     +  K    +DG+ TLKDAVKPK KRK K
Sbjct: 421 AQKVGVEISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of ClCG03G013080 vs. TAIR 10
Match: AT3G60500.2 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 507.3 bits (1305), Expect = 1.3e-143
Identity = 276/464 (59.48%), Postives = 338/464 (72.84%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLP+A TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDDRKSINDLS----ERLKLNSEESIASQSGSIKSDVSTNQGQINKR 360
            G    +K+    S D++   ++S    ERLKL++EE  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTATKKQNLSDEMISSETKGD 420
           + +  NF GGPS WDPYS+ +D D LK +LASRG+     ++TKK N S         G+
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGS---------GN 420

Query: 421 EQEAKVD---QTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKK 453
            Q+  V+   +     +  K    +DG+ TLKDAVKPK KRK K
Sbjct: 421 AQKVGVEISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of ClCG03G013080 vs. TAIR 10
Match: AT3G60500.3 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 507.3 bits (1305), Expect = 1.3e-143
Identity = 276/464 (59.48%), Postives = 338/464 (72.84%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLP+A TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDDRKSINDLS----ERLKLNSEESIASQSGSIKSDVSTNQGQINKR 360
            G    +K+    S D++   ++S    ERLKL++EE  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDDKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTATKKQNLSDEMISSETKGD 420
           + +  NF GGPS WDPYS+ +D D LK +LASRG+     ++TKK N S         G+
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGS---------GN 420

Query: 421 EQEAKVD---QTNLPAVAAKTLSEEDGKKTLKDAVKPKNKRKKK 453
            Q+  V+   +     +  K    +DG+ TLKDAVKPK KRK K
Sbjct: 421 AQKVGVEISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of ClCG03G013080 vs. TAIR 10
Match: AT3G12990.1 (ribonuclease PH45A )

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-122
Identity = 210/292 (71.92%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLP+A TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of ClCG03G013080 vs. TAIR 10
Match: AT3G12990.2 (ribonuclease PH45A )

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-122
Identity = 210/292 (71.92%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPVAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLP+A TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

The following BLAST results are available for this feature:

BLAST of ClCG03G013080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879556.1	1.8e-240	95.14	exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_0388795...	[more]
XP_022988100.1	1.4e-232	90.69	exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome...	[more]
KAG7023846.1	3.2e-229	90.48	Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590195.1	8.0e-228	90.28	Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_004139042.1	2.3e-227	89.37	exosome complex component RRP45A isoform X1 [Cucumis sativus] >XP_011660140.1 ex...	[more]

BLAST of ClCG03G013080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M209	1.8e-142	59.48	Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 ...	[more]
Q9LDM2	1.8e-121	71.92	Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 ...	[more]
Q06265	1.5e-67	45.82	Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3	[more]
Q9JHI7	1.9e-67	45.45	Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1	[more]
Q4QR75	1.9e-67	45.45	Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=...	[more]

BLAST of ClCG03G013080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JG94	6.8e-233	90.69	exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC11148544...	[more]
A0A0A0M072	1.1e-227	89.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1	[more]
A0A6J1HA43	1.1e-227	89.85	exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A1S3BP69	1.5e-224	89.37	exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1DLD8	3.6e-218	87.12	exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of ClCG03G013080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60500.1	1.3e-143	59.48	3'-5'-exoribonuclease family protein	[more]
AT3G60500.2	1.3e-143	59.48	3'-5'-exoribonuclease family protein	[more]
AT3G60500.3	1.3e-143	59.48	3'-5'-exoribonuclease family protein	[more]
AT3G12990.1	1.3e-122	71.92	ribonuclease PH45A	[more]
AT3G12990.2	1.3e-122	71.92	ribonuclease PH45A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 5..296 e-value: 7.1E-98 score: 329.5
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 197..262 e-value: 1.1E-11 score: 44.5
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 37..168 e-value: 5.3E-22 score: 78.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..357
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 4..340
None	No IPR available	PANTHER	PTHR11097:SF26	EXOSOME COMPLEX COMPONENT RRP45A-LIKE	coord: 4..340
IPR033100	Exosome complex component RRP45	CDD	cd11368	RNase_PH_RRP45	coord: 11..270 e-value: 1.19073E-131 score: 378.794
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 193..291
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 10..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G013080.1	ClCG03G013080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process
biological_process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
biological_process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0034473	U1 snRNA 3'-end processing
biological_process	GO:0034475	U4 snRNA 3'-end processing
biological_process	GO:0034476	U5 snRNA 3'-end processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0000178	exosome (RNase complex)