ClCG03G012460 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G012460
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCCHC-type domain-containing protein
LocationCG_Chr03: 25406235 .. 25407955 (+)
RNA-Seq ExpressionClCG03G012460
SyntenyClCG03G012460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGGTTCAAATCTAGTTCTCTTGTGTAAATCTGGAGGGACATAACGAAAGTAAGGTCGAGATCGATCAAACTGAGAATAGGGATCTCCAAAAGAATCCAGTTCTAAGAAAGGAAAATCCAATGGATTAAGCCCCTATCGACGCTACCAAGGGAAGCAACGGAGTAACAGAGATGAACTGAGGCGGATCCAAGAAGACGAGGGGCGTATCCCGAGGAACAGTAACTTGGTCTGATGTGCGGTTGATGGGACAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGGTCAGAACATGGAATTGAAAGGACAAAATAAATCTGAAATCATTTCTGATCAAAAGAAAGGTTTAGACTCTAGTGGATTTCCTTTGTCTCAAAAAAGGATCTGCACAGGAGAGGGGATTTTAAGTGAGATATCGACGAAGGTTGCACTTCACCCTGCCAAATGTCATGAAAATCTAAAGTTGGAATGTTCGGGGAGCGAGCAACCCCCCAACATTCCGTCAACTGAAACAAGTTGTGGAGAGACAGAAGCTACAACTTGTTTTTCTTTCAGAGACTAGAATTAAACATGACATGGAGGAAAAGTTGAAAAAAGGTTTGAATTTGAGTGGCTGATTTAGTGTTTTCAGTTGCGGCAGAAGGGATGGCCTTTCCATTCTTTGGGAAGATGATCTTTAGGTTGAGGTTTTATCTTCGTCCTTTGGGCACATTAATGTTCTTGTCAACAGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA

mRNA sequence

ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA

Coding sequence (CDS)

ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA

Protein sequence

MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEMDKEDQVKDKDCCQPGEKAKDNGEWGQQVEEEIGISEKPYMDLAHENISGSTKGKGSKEEVGLSPSEKGLNWISPFSGKALQEGKNTPKRSVEIYWVLWKSGDKLKEGFVEAPRKACGRRKLSLASWRGFQ
Homology
BLAST of ClCG03G012460 vs. NCBI nr
Match: XP_024955847.1 (uncharacterized protein LOC112498636 [Citrus sinensis])

HSP 1 Score: 116.7 bits (291), Expect = 3.9e-22
Identity = 94/339 (27.73%), Postives = 158/339 (46.61%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           M  G W FD AL++  + KG   I+N  F +  FW+H  N+P+    R +V  LG  +G 
Sbjct: 94  MGGGPWHFDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGS 153

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           +E++D +EE     K   +R+ +DI+KPLR+ + V+      +  IPI YE+L DFC+  
Sbjct: 154 VEEIDTDEEGNCIGKIARLRISVDITKPLRKFLEVETEDEGSI-PIPILYERLPDFCFCC 213

Query: 121 GLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQ 180
           GLI H  K+C  ++G  +KDL Y   +          K  ++ GK K   R+ W+ ++ Q
Sbjct: 214 GLIGHQYKECIEYKGQPKKDLPYGYWM----------KATTRFGKLKQNCRDKWQREQNQ 273

Query: 181 LQQKGEPSQTPKEGRRKDDRSRLNLGAQLEMDKEDQ-VKDKDCCQPGEKAKDNGEWGQQV 240
            ++    S T  + + ++ +       + E   E   +K  +   P    K+    G+ +
Sbjct: 274 FKKGDGASDTQSQQKMQNSQR----DPETEYGSESSPLKSGEPLDPMVHGKNGKVDGEHL 333

Query: 241 EEEIGISEK----PYMDLAHENISGSTKGKGSKEE--VGLSPSEKGLNW------ISPFS 300
            ++ G S +    P +++A  + +  T  +   E   V      K   W      IS  S
Sbjct: 334 MQKAGNSRRQLKLPAVEVAEADTTEQTSAEEEVENGPVASQSKPKRKKWKLQAREIS--S 393

Query: 301 GKALQEGKNTPKRSVEIYWVLWKSGDKLKEGFVEAPRKA 327
               Q+G    KR  E   + W+S D+ K+  + +PR A
Sbjct: 394 SSKAQKGLGATKRKGET--ISWRSPDRKKKR-LNSPRAA 412

BLAST of ClCG03G012460 vs. NCBI nr
Match: XP_015382410.1 (uncharacterized protein LOC107175497 [Citrus sinensis])

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-21
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           M  G W FD AL++  + KG   I+N  F +  FW+H  N+P+    R +V  LG  +G 
Sbjct: 94  MGGGPWHFDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGS 153

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           +E +D ++E     +   +R+ +DI+KPLR+ + V+      +  IPI YE+L DFC+  
Sbjct: 154 VEDIDTDKEGNCIGEIARLRISVDITKPLRKFLEVETEDECSI-PIPILYERLPDFCFCC 213

Query: 121 GLIRHLLKDCETHRGTMEKDLQY 144
           GLI H  K+C  ++G  +KDL Y
Sbjct: 214 GLIGHQYKECIEYKGQPKKDLPY 235

BLAST of ClCG03G012460 vs. NCBI nr
Match: XP_024037025.1 (uncharacterized protein LOC112096996 [Citrus clementina])

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-21
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           M  G W FD AL++  + KG   I+N  F +  FW+H  N+P+    R +V  LG  +G 
Sbjct: 94  MGGGPWHFDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGS 153

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           +E +D ++E     +   +R+ +DI+KPLR+ + V+      +  IPI YE+L DFC+  
Sbjct: 154 VEDIDTDKEGNCIGEIARLRISVDITKPLRKFLEVETEDECSI-PIPILYERLPDFCFCC 213

Query: 121 GLIRHLLKDCETHRGTMEKDLQY 144
           GLI H  K+C  ++G  +KDL Y
Sbjct: 214 GLIGHQYKECIEYKGQPKKDLPY 235

BLAST of ClCG03G012460 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-20
Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           M++G WFFDKALI+ +    +K+IS L+F   +FWIH  +LP+    + +   LGN +G 
Sbjct: 95  MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
              VD  E+   W  +L +RV +DI+KPLRR + + +        IPI YE+L DFCY  
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214

Query: 121 GLIRHLLKDCETHRGTMEKD----LQYSSILHFNGS---IQNGGKGGSKA------GKSK 180
           G+I H   DC+      + D     +Y   L F GS    Q G KG S A        S 
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSM 274

Query: 181 GKKRNGWRAKEQQLQQK 185
             K  G    +QQL ++
Sbjct: 275 NSKERGVEETKQQLSEQ 291

BLAST of ClCG03G012460 vs. NCBI nr
Match: TXG57565.1 (hypothetical protein EZV62_015394 [Acer yangbiense])

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-19
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           +  G W FD ALI+ E+  G  +I  L F    FW+H +NLPL+  T++I   LG ++GE
Sbjct: 96  LAGGPWSFDDALIVLEEPTGKGAIRGLKFDVVEFWVHISNLPLLCMTKEIAKFLGGIIGE 155

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           + ++D         K L +RV +DI KPLRR + V V    E + +PI +E+L +FC+  
Sbjct: 156 VREIDTGPIGDCLGKFLRVRVAIDIGKPLRRFLRVDVLGDGEETVMPIQHERLPNFCFYC 215

Query: 121 GLIRHLLKDCE---THRGTMEKDLQYSSIL----------------HFNGSIQNGGKGG 161
           G++ H+++ C         +  D QY S L                H+NG    GG GG
Sbjct: 216 GMLGHVVRGCPEICKQENVVVSDFQYGSWLRVASPVKVQNRRGWGPHYNG----GGDGG 270

BLAST of ClCG03G012460 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.0e-21
Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           M++G WFFDKALI+ +    +K+IS L+F   +FWIH  +LP+    + +   LGN +G 
Sbjct: 95  MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
              VD  E+   W  +L +RV +DI+KPLRR + + +        IPI YE+L DFCY  
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214

Query: 121 GLIRHLLKDCETHRGTMEKD----LQYSSILHFNGS---IQNGGKGGSKA------GKSK 180
           G+I H   DC+      + D     +Y   L F GS    Q G KG S A        S 
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSM 274

Query: 181 GKKRNGWRAKEQQLQQK 185
             K  G    +QQL ++
Sbjct: 275 NSKERGVEETKQQLSEQ 291

BLAST of ClCG03G012460 vs. ExPASy TrEMBL
Match: A0A5C7HLA0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015394 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-19
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           +  G W FD ALI+ E+  G  +I  L F    FW+H +NLPL+  T++I   LG ++GE
Sbjct: 96  LAGGPWSFDDALIVLEEPTGKGAIRGLKFDVVEFWVHISNLPLLCMTKEIAKFLGGIIGE 155

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           + ++D         K L +RV +DI KPLRR + V V    E + +PI +E+L +FC+  
Sbjct: 156 VREIDTGPIGDCLGKFLRVRVAIDIGKPLRRFLRVDVLGDGEETVMPIQHERLPNFCFYC 215

Query: 121 GLIRHLLKDCE---THRGTMEKDLQYSSIL----------------HFNGSIQNGGKGG 161
           G++ H+++ C         +  D QY S L                H+NG    GG GG
Sbjct: 216 GMLGHVVRGCPEICKQENVVVSDFQYGSWLRVASPVKVQNRRGWGPHYNG----GGDGG 270

BLAST of ClCG03G012460 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 44/130 (33.85%), Postives = 78/130 (60.00%), Query Frame = 0

Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           ++ G W F  +LI+ E   G  ++S L F  A FW+  +++P++   R+    L   +GE
Sbjct: 94  LQRGPWHFGNSLIVLEKSTGEGNVSKLGFNRADFWVQIHDIPILCMNRRTAKWLAKQIGE 153

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           + ++ P E +  W K +W++V++DI KPL+R + +K+    EV+ + + YEKL DFCY  
Sbjct: 154 VVEI-PSESRECWGKFMWVKVRIDILKPLKRWLKLKIGQTDEVTLVSLKYEKLPDFCYAC 213

Query: 121 GLIRHLLKDC 131
           G + + +K+C
Sbjct: 214 GRMGYGMKEC 222

BLAST of ClCG03G012460 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18
Identity = 48/130 (36.92%), Postives = 79/130 (60.77%), Query Frame = 0

Query: 4   GSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEK 63
           G W FD ALI+ E+ +G  +I++L F    FW+H  N+P++  T+ I   LG+++GE+ +
Sbjct: 85  GPWSFDGALIVLEEPEGKGAINSLLFNSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVRE 144

Query: 64  VDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLI 123
           VD         K + +RV +++ KPLRR + V V    E + +PI YE+L  FC+  GL+
Sbjct: 145 VDVGPSSDCLGKFMRVRVAVEVDKPLRRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLV 204

Query: 124 RHLLKDCETH 134
            HL+ +C ++
Sbjct: 205 GHLVHECTSY 214

BLAST of ClCG03G012460 vs. ExPASy TrEMBL
Match: A0A5C7IZA1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002521 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-18
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0

Query: 4   GSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEK 63
           G W FD+ LI+    +G   IS L F +  FW+  +N+P++  T KI  ++ N +G +  
Sbjct: 84  GPWHFDRCLIVLVKPQGLGEISKLSFNFVEFWVQVHNIPIICMTGKIARLIFNSIGPV-- 143

Query: 64  VD-PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGL 123
           +D P E K +W K L  ++++DISKPL+R V + +          + YE+L DFCY YGL
Sbjct: 144 IDFPMETKNYWGKFLRAKIRVDISKPLKRGVVIGLEENGVQITAALKYERLSDFCYVYGL 203

Query: 124 IRHLLKDCETHRG 136
           I H +++C    G
Sbjct: 204 IGHTIRECMDDEG 214

BLAST of ClCG03G012460 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 36/137 (26.28%), Postives = 63/137 (45.99%), Query Frame = 0

Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           WF   AL  +ED      ++ +D      W+H   +PL   + + V ++ + +GE+  +D
Sbjct: 102 WFI--ALQRWEDFPTEDFLTFID-----VWVHIRGIPLPYVSERTVEIIASTLGEVVAMD 161

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
             EE       + ++V+MD ++PLR    V+  S  E + I   YEKL   C     + H
Sbjct: 162 FNEETTSQITFIRVKVRMDFTEPLRFFRRVRFAS-RERAMIGFEYEKLQRVCTNCCRVNH 221

Query: 126 LLKDCE--THRGTMEKD 141
            +  C    H+  M+ +
Sbjct: 222 QVSHCPYVVHQEEMDNE 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024955847.13.9e-2227.73uncharacterized protein LOC112498636 [Citrus sinensis][more]
XP_015382410.15.7e-2137.06uncharacterized protein LOC107175497 [Citrus sinensis][more]
XP_024037025.15.7e-2137.06uncharacterized protein LOC112096996 [Citrus clementina][more]
XP_022156185.11.6e-2036.55uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
TXG57565.14.1e-1934.08hypothetical protein EZV62_015394 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU558.0e-2136.55uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7HLA02.0e-1934.08CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01539... [more]
A0A5C7HB599.8e-1933.85Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1[more]
A0A5C7GUN11.3e-1836.92Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1[more]
A0A5C7IZA13.7e-1836.84Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002521 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G36228.12.5e-0626.28nucleic acid binding;zinc ion binding [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 83..131
e-value: 1.1E-7
score: 31.5
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 1..82
e-value: 9.7E-10
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..236
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 4..275
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 4..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G012460.2ClCG03G012460.2mRNA