ClCG03G011680 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATTTGTCCGTCTACATTCACTGCTCTTACCAGTTGGCAACCACCTGAGGAGATGTTTTGGAAGCTAAACACTGATGTTGCTTGGAGCTCTGTTTCTAAGGCATGCGGAAGGCCTAGGGTGGGTGCTTGGGACCACTAGGGTCATGTTCGTCTTGTGGGATCAAAGTTCATTCCTAGATGTGGTGAGGTTAAGACACTTGAAGCAATGACAATTTGTCTTGGGCTTAAGAGGATTTCTCAAATTCTTAATTCAAACCTTTTGGTTGAATCTGATGGCTTAGAGGTGACCAAATTGCTAGACAACATTGTGGATGATATCACAGAGGTCTCTTACTTTATTGACGAGGCAAAGATGCAGGGAGGTGATTTAGGTGTTATCTCTTTCTCCCATGTTCGTTGA ATGGTGATTTGTCCGTCTACATTCACTGCTCTTACCAGTTGGCAACCACCTGAGGAGATGTTTTGGAAGCTAAACACTGATGTTGCTTGGAGCTCTGTTTCTAAGGCATGCGGAAGGCCTAGGGGTCATGTTCGTCTTGTGGGATCAAAGTTCATTCCTAGATGTGGTGAGGTTAAGACACTTGAAGCAATGACAATTTGTCTTGGGCTTAAGAGGATTTCTCAAATTCTTAATTCAAACCTTTTGGTTGAATCTGATGGCTTAGAGGTGACCAAATTGCTAGACAACATTGTGGATGATATCACAGAGGTCTCTTACTTTATTGACGAGGCAAAGATGCAGGGAGGTGATTTAGGTGTTATCTCTTTCTCCCATGTTCGTTGA ATGGTGATTTGTCCGTCTACATTCACTGCTCTTACCAGTTGGCAACCACCTGAGGAGATGTTTTGGAAGCTAAACACTGATGTTGCTTGGAGCTCTGTTTCTAAGGCATGCGGAAGGCCTAGGGGTCATGTTCGTCTTGTGGGATCAAAGTTCATTCCTAGATGTGGTGAGGTTAAGACACTTGAAGCAATGACAATTTGTCTTGGGCTTAAGAGGATTTCTCAAATTCTTAATTCAAACCTTTTGGTTGAATCTGATGGCTTAGAGGTGACCAAATTGCTAGACAACATTGTGGATGATATCACAGAGGTCTCTTACTTTATTGACGAGGCAAAGATGCAGGGAGGTGATTTAGGTGTTATCTCTTTCTCCCATGTTCGTTGA MVICPSTFTALTSWQPPEEMFWKLNTDVAWSSVSKACGRPRGHVRLVGSKFIPRCGEVKTLEAMTICLGLKRISQILNSNLLVESDGLEVTKLLDNIVDDITEVSYFIDEAKMQGGDLGVISFSHVR Homology
BLAST of ClCG03G011680 vs. NCBI nr
Match: XP_038886170.1 (uncharacterized protein LOC120076417 [Benincasa hispida]) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20 Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of ClCG03G011680 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06 Identity = 37/119 (31.09%), Postives = 55/119 (46.22%), Query Frame = 0
BLAST of ClCG03G011680 vs. NCBI nr
Match: XP_022148737.1 (uncharacterized protein LOC111017329 [Momordica charantia]) HSP 1 Score: 61.2 bits (147), Expect = 7.3e-06 Identity = 35/124 (28.23%), Postives = 61/124 (49.19%), Query Frame = 0
BLAST of ClCG03G011680 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 58.2 bits (139), Expect = 6.2e-05 Identity = 37/119 (31.09%), Postives = 58/119 (48.74%), Query Frame = 0
BLAST of ClCG03G011680 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia]) HSP 1 Score: 54.7 bits (130), Expect = 6.8e-04 Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of ClCG03G011680 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 9.3e-07 Identity = 37/119 (31.09%), Postives = 55/119 (46.22%), Query Frame = 0
BLAST of ClCG03G011680 vs. ExPASy TrEMBL
Match: A0A6J1D5W1 (uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017329 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06 Identity = 35/124 (28.23%), Postives = 61/124 (49.19%), Query Frame = 0
BLAST of ClCG03G011680 vs. ExPASy TrEMBL
Match: A0A5B7BU49 (RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041820 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04 Identity = 36/121 (29.75%), Postives = 57/121 (47.11%), Query Frame = 0
BLAST of ClCG03G011680 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04 Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of ClCG03G011680 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 7.4e-04 Identity = 32/87 (36.78%), Postives = 41/87 (47.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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