ClCG03G011650 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G011650
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr03: 23005038 .. 23006539 (-)
RNA-Seq ExpressionClCG03G011650
SyntenyClCG03G011650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGGAGAGGAACATCTCTATGGTTCAACGAGCCCAGGTTGACTTCTCTGCTGAAGTCATAAATGAGGCCTATGTGGTCCCTGACGAAGAGGGAGAGGAGTGTAGAAGGAGGATGTACGGACCCACTGAGGAGCAAGTGGCAAATGCACTCAAGTTGGTCGCTCTCAAAGGAGCTGAGTGGTCATATCACCCACGCGTAGTAGGACACTCAGACCAGGAAATATTAGAGATAACTTGGCTATCTTGTTGTACTTCGCTAAGCATAGGATCATGCGCACCACACATGACTCCATTATATCACTAGAGAGGATCATGTTCTTGTACAACCTGCAAAAGGTGCTCCCTATCAACTTAGGAGTTATTATCAAAAGGGAGCTGGTGGAGTACGGCCTGCGAGCAAGGGGAAGGTTGTTCTTCCCATCCTTGATAGCCAAGTTATGAGTCAGAGATGGAGTAGTGGTTGCAATGATGAAGAAAAGTGCAAGGTCAAACCTGCCATTGACCTCACATTGATTAAGAGGCTCAAAGACAACATGGAACACAAGAAGAGTCAAGCCTTCTCTAGAAAGAGTGCACGATCACCTACTGAGGCCACTCCCACATCCTCACAAAGTTGCATATTGAGGCCATACGACATTTTCTCACCTGAGGTGTCAAAACAACACAACCCAAGGGTAGAGACTCAACCTCCCACAACAGACATGTAGTGGCAATCTGATGCGCCAGCCAATGCAATCGCATCACCTACTTAGCAAACATTTGGAGCAGTTGCACCATCCGTGCAGGCCAGGACCGTGGTTGGTTACTCGGCTGACCAGCTGGAGAAGTTCATGGCTTAGTTCCATGATTATTGGCATTATGCTAAGGCTCGGGATAATGCATTTAGGAGATTTCTGAGCTCCGCCAAGCCCGACCATTATCTTGTAGTCCCTCCTTTTCCCGATCATATCCTCCATAACCCACTTGACCTTAAAGAAGAAGTAAAGAAGAATGATGATGATGATAATGCTCCTGCTCAAACCTAGTACTATGTTCCTTTTATTCGCTTTCTATAGATAGGTTTTAGTTTGTTTTTGCTTTCTTTCTCTTGGTTTGCTTAATTAGAATTGATGTTGGAAATAGACACAAAAACAATGAAAATATTATGATCACGTAAAATAGTTGCATGCTAGTCTTTTTGTGGTGCAAAGTAGCTTTTAATGACGATATCTAAAGCATATTTCGTTATGGCATGCCTTGAATCATTAATTCCCAAAAGATGTACAAAATCAAGCGTTCTAACTATTTTTATGAGCAAAACATCATTAGGGCGATCTATCACATGTTCAAAAGACTTAATTCACTAGGTTGGAAGTTTTTAACGAAGCTGTAAAGCATTTAGGATCACACTAGGTTTGATGACTGGTAGATAGGTTAGTTGGCATTTTGATTAGTCAGCTAAGGAGGTTGAGCCAAAACTCTGCTAAACCTCTTGTGAGGGCATTTTGGGAGGATTGA

mRNA sequence

ATGCAGCTGGAGAGGAACATCTCTATGGTTCAACGAGCCCAGGTTGACTTCTCTGCTGAAGTCATAAATGAGGCCTATGTGGTCCCTGACGAAGAGGGAGAGGAGTGTAGAAGGAGGATGTACGGACCCACTGAGGAGCAAGTGGCAAATGCACTCAAGTTGGTCGCTCTCAAAGGAGCTGAACCAGGAAATATTAGAGATAACTTGGCTATCTTGTTGTACTTCGCTAAGCATAGGATCATGCGCACCACACATGACTCCATTATATCACTAGAGAGGATCATGTTCTTGTACAACCTGCAAAAGGGAGCTGGTGGAGTACGGCCTGCGAGCAAGGGGAAGGTTGTTCTTCCCATCCTTGATAGCCAAGTTATGAGTCAGAGATGGAGTAGTGGTTGCAATGATGAAGAAAAGTGCAAGGTCAAACCTGCCATTGACCTCACATTGATTAAGAGGCTCAAAGACAACATGGAACACAAGAAGAGTCAAGCCTTCTCTAGAAAGAGTGCACGATCACCTACTGAGGCCACTCCCACATCCTCACAAAGTTGCATATTGAGGCCATACGACATTTTCTCACCTGAGACATGTAGTGGCAATCTGATGCGCCAGCCAATGCAATCGCATCACCTACTTAGCAAACATTTGGAGCAGTTGCACCATCCGTGCAGGCCAGGACCGTGGTTGTTCCATGATTATTGGCATTATGCTAAGGCTCGGGATAATGCATTTAGGAGATTTCTGAGCTCCGCCAAGCCCGACCATTATCTTGTAGTCCCTCCTTTTCCCGATCATATCCTCCATAACCCACTTGACCTTAAAGAAGAAGTAAAGAAGAATGATGATGATGATAATGCTCCTGCTCAAACCTATCAGCTAAGGAGGTTGAGCCAAAACTCTGCTAAACCTCTTGTGAGGGCATTTTGGGAGGATTGA

Coding sequence (CDS)

ATGCAGCTGGAGAGGAACATCTCTATGGTTCAACGAGCCCAGGTTGACTTCTCTGCTGAAGTCATAAATGAGGCCTATGTGGTCCCTGACGAAGAGGGAGAGGAGTGTAGAAGGAGGATGTACGGACCCACTGAGGAGCAAGTGGCAAATGCACTCAAGTTGGTCGCTCTCAAAGGAGCTGAACCAGGAAATATTAGAGATAACTTGGCTATCTTGTTGTACTTCGCTAAGCATAGGATCATGCGCACCACACATGACTCCATTATATCACTAGAGAGGATCATGTTCTTGTACAACCTGCAAAAGGGAGCTGGTGGAGTACGGCCTGCGAGCAAGGGGAAGGTTGTTCTTCCCATCCTTGATAGCCAAGTTATGAGTCAGAGATGGAGTAGTGGTTGCAATGATGAAGAAAAGTGCAAGGTCAAACCTGCCATTGACCTCACATTGATTAAGAGGCTCAAAGACAACATGGAACACAAGAAGAGTCAAGCCTTCTCTAGAAAGAGTGCACGATCACCTACTGAGGCCACTCCCACATCCTCACAAAGTTGCATATTGAGGCCATACGACATTTTCTCACCTGAGACATGTAGTGGCAATCTGATGCGCCAGCCAATGCAATCGCATCACCTACTTAGCAAACATTTGGAGCAGTTGCACCATCCGTGCAGGCCAGGACCGTGGTTGTTCCATGATTATTGGCATTATGCTAAGGCTCGGGATAATGCATTTAGGAGATTTCTGAGCTCCGCCAAGCCCGACCATTATCTTGTAGTCCCTCCTTTTCCCGATCATATCCTCCATAACCCACTTGACCTTAAAGAAGAAGTAAAGAAGAATGATGATGATGATAATGCTCCTGCTCAAACCTATCAGCTAAGGAGGTTGAGCCAAAACTCTGCTAAACCTCTTGTGAGGGCATTTTGGGAGGATTGA

Protein sequence

MQLERNISMVQRAQVDFSAEVINEAYVVPDEEGEECRRRMYGPTEEQVANALKLVALKGAEPGNIRDNLAILLYFAKHRIMRTTHDSIISLERIMFLYNLQKGAGGVRPASKGKVVLPILDSQVMSQRWSSGCNDEEKCKVKPAIDLTLIKRLKDNMEHKKSQAFSRKSARSPTEATPTSSQSCILRPYDIFSPETCSGNLMRQPMQSHHLLSKHLEQLHHPCRPGPWLFHDYWHYAKARDNAFRRFLSSAKPDHYLVVPPFPDHILHNPLDLKEEVKKNDDDDNAPAQTYQLRRLSQNSAKPLVRAFWED
Homology
BLAST of ClCG03G011650 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-05
Identity = 55/242 (22.73%), Postives = 101/242 (41.74%), Query Frame = 0

Query: 60  AEPGNIRDNLAILLYFAKHRIMRTTHDSIISLERIMFLYNLQKGAG------------GV 119
           AE G +     +  +F K R++ TTH   +S +R++ LY++  G                
Sbjct: 36  AEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRAC 95

Query: 120 RPASKGKVVLPILDSQVMSQRWSSGCNDEEKCKVKPAIDLTLIKRLKDNMEHKKSQAFSR 179
                G +  P L +Q+     +    +EEK  +   ID   + R+    + + +Q   +
Sbjct: 96  AARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQ---Q 155

Query: 180 KSARSPTEATPTSSQSCILRPYDIFSPETCSGNLMRQPMQSHHLLSKHLEQLHHPCRPGP 239
            S   PT A+ + +   IL+       +     L +Q +Q +H++S  L+  H   +   
Sbjct: 156 PSTSRPTVASSSRANGDILQQL-----KALEQRLSQQEVQQYHMMSL-LQHTHKQQQ--- 215

Query: 240 WLFHDYWHYAKARDNAFRRFLSSAKPDHYLVVPPFPDHILHNPLDLKEEVKKNDDDDNAP 290
                +W Y+K RD A ++ L +         P FP  +L + LD + E + + D  N  
Sbjct: 216 ----QFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELLQD-LDYEYEAESDKDGSNEA 260

BLAST of ClCG03G011650 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-04
Identity = 77/310 (24.84%), Postives = 124/310 (40.00%), Query Frame = 0

Query: 4   ERNISMVQRAQVDFSAEVINEAYVVPDEEGEECRRRMYGPTEEQVANALKLVALKGAEPG 63
           E N   V+  QV +S E IN  + + D   +E    +   TE ++   L+ VA  GAE  
Sbjct: 28  EENTIYVRGVQVSWSEEAINAVFGLGDPV-DEHSEFIENITEPELITVLETVAAAGAEWN 87

Query: 64  --------NIRDNLA----ILLYFAKHRIMRTTHDSIISLERIMFLYNLQKGAG------ 123
                    IR  L     +  +F K R++ TTH  I+S +R++ L+++  G        
Sbjct: 88  VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRM 147

Query: 124 ------GVRPASKGKVVLPILDSQVMSQRWSSGCNDEEKCKVKPAIDLTLIKRLKDNMEH 183
                        G +  P L +++   R +    +EEK      ID   + R+      
Sbjct: 148 IHSEIRACAAQKTGALFFPSLITRLC--RNAPFLVNEEKLHNTGEIDAIAVARI------ 207

Query: 184 KKSQAFSRKSARSPTEATPTSSQSCILRPYDIFSPETCSGNLMRQPMQSHHLLSKHLEQL 243
                    +   PTE+T   S S   RP    S  T +G++++Q       L + L Q 
Sbjct: 208 ---------TQEGPTESTQQPSSS---RPAAASSSRT-NGDVLQQ----LKALEQRLSQQ 267

Query: 244 HHPCRPGPWLFHDYWHYAKARDNAFRRFLSSAKPDHYLVVPPFPDHILHNPLDLKEEVKK 290
            H  +        +W Y+K RD A ++ L +         P FP  IL + LD + E + 
Sbjct: 268 EHTHKQQ----QQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD-LDYEYEAES 306

BLAST of ClCG03G011650 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05
Identity = 55/242 (22.73%), Postives = 101/242 (41.74%), Query Frame = 0

Query: 60  AEPGNIRDNLAILLYFAKHRIMRTTHDSIISLERIMFLYNLQKGAG------------GV 119
           AE G +     +  +F K R++ TTH   +S +R++ LY++  G                
Sbjct: 36  AEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRAC 95

Query: 120 RPASKGKVVLPILDSQVMSQRWSSGCNDEEKCKVKPAIDLTLIKRLKDNMEHKKSQAFSR 179
                G +  P L +Q+     +    +EEK  +   ID   + R+    + + +Q   +
Sbjct: 96  AARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQ---Q 155

Query: 180 KSARSPTEATPTSSQSCILRPYDIFSPETCSGNLMRQPMQSHHLLSKHLEQLHHPCRPGP 239
            S   PT A+ + +   IL+       +     L +Q +Q +H++S  L+  H   +   
Sbjct: 156 PSTSRPTVASSSRANGDILQQL-----KALEQRLSQQEVQQYHMMSL-LQHTHKQQQ--- 215

Query: 240 WLFHDYWHYAKARDNAFRRFLSSAKPDHYLVVPPFPDHILHNPLDLKEEVKKNDDDDNAP 290
                +W Y+K RD A ++ L +         P FP  +L + LD + E + + D  N  
Sbjct: 216 ----QFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELLQD-LDYEYEAESDKDGSNEA 260

BLAST of ClCG03G011650 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 77/310 (24.84%), Postives = 124/310 (40.00%), Query Frame = 0

Query: 4   ERNISMVQRAQVDFSAEVINEAYVVPDEEGEECRRRMYGPTEEQVANALKLVALKGAEPG 63
           E N   V+  QV +S E IN  + + D   +E    +   TE ++   L+ VA  GAE  
Sbjct: 28  EENTIYVRGVQVSWSEEAINAVFGLGDPV-DEHSEFIENITEPELITVLETVAAAGAEWN 87

Query: 64  --------NIRDNLA----ILLYFAKHRIMRTTHDSIISLERIMFLYNLQKGAG------ 123
                    IR  L     +  +F K R++ TTH  I+S +R++ L+++  G        
Sbjct: 88  VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRM 147

Query: 124 ------GVRPASKGKVVLPILDSQVMSQRWSSGCNDEEKCKVKPAIDLTLIKRLKDNMEH 183
                        G +  P L +++   R +    +EEK      ID   + R+      
Sbjct: 148 IHSEIRACAAQKTGALFFPSLITRLC--RNAPFLVNEEKLHNTGEIDAIAVARI------ 207

Query: 184 KKSQAFSRKSARSPTEATPTSSQSCILRPYDIFSPETCSGNLMRQPMQSHHLLSKHLEQL 243
                    +   PTE+T   S S   RP    S  T +G++++Q       L + L Q 
Sbjct: 208 ---------TQEGPTESTQQPSSS---RPAAASSSRT-NGDVLQQ----LKALEQRLSQQ 267

Query: 244 HHPCRPGPWLFHDYWHYAKARDNAFRRFLSSAKPDHYLVVPPFPDHILHNPLDLKEEVKK 290
            H  +        +W Y+K RD A ++ L +         P FP  IL + LD + E + 
Sbjct: 268 EHTHKQQ----QQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD-LDYEYEAES 306

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON59596.13.0e-0522.73hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
PON78020.12.6e-0424.84hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5CEY21.5e-0522.73Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A2P5DXM31.2e-0424.84Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G011650.1ClCG03G011650.1mRNA