ClCG03G011460 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCAGAAATAGCCACTCAAGTAATGGGATATGAGAAATCGAAGGACCTATGGGAAGCAATCCAAAAGTTGTTCGATGTTCAATCCAAAACTGAAGAGGATTTCCTCAGGCAAACATTCCAACAGACTAGAAAAGGTAATTTTCGTATGTCTGAATATCTACGATTGATGAAAATGCACTCTGATAATCTGGGTCAAGCAGAAAGTCATGTTCCCACTAGACCGCTTGTATCTCAAGTCCTTTTAGGGCTTGATGAAGATTACAATCCAGTAGTTGCTACCTTACAAGGAAAACCAGAAACAACTTGGCTAGAAATGCAATTGGAGCTATTAACCTATGAAAGATGA ATGACACCAGAAATAGCCACTCAAGTAATGGGATATGAGAAATCGAAGGACCTATGGGAAGCAATCCAAAAGTTGTTCGATGTTCAATCCAAAACTGAAGAGGATTTCCTCAGGCAAACATTCCAACAGACTAGAAAAGGTAATTTTCGTATGTCTGAATATCTACGATTGATGAAAATGCACTCTGATAATCTGGGTCAAGCAGAAAGTCATGTTCCCACTAGACCGCTTGTATCTCAAGTCCTTTTAGGGCTTGATGAAGATTACAATCCAGTAGTTGCTACCTTACAAGGAAAACCAGAAACAACTTGGCTAGAAATGCAATTGGAGCTATTAACCTATGAAAGATGA ATGACACCAGAAATAGCCACTCAAGTAATGGGATATGAGAAATCGAAGGACCTATGGGAAGCAATCCAAAAGTTGTTCGATGTTCAATCCAAAACTGAAGAGGATTTCCTCAGGCAAACATTCCAACAGACTAGAAAAGGTAATTTTCGTATGTCTGAATATCTACGATTGATGAAAATGCACTCTGATAATCTGGGTCAAGCAGAAAGTCATGTTCCCACTAGACCGCTTGTATCTCAAGTCCTTTTAGGGCTTGATGAAGATTACAATCCAGTAGTTGCTACCTTACAAGGAAAACCAGAAACAACTTGGCTAGAAATGCAATTGGAGCTATTAACCTATGAAAGATGA MTPEIATQVMGYEKSKDLWEAIQKLFDVQSKTEEDFLRQTFQQTRKGNFRMSEYLRLMKMHSDNLGQAESHVPTRPLVSQVLLGLDEDYNPVVATLQGKPETTWLEMQLELLTYER Homology
BLAST of ClCG03G011460 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia]) HSP 1 Score: 161.8 bits (408), Expect = 3.6e-36 Identity = 78/110 (70.91%), Postives = 94/110 (85.45%), Query Frame = 0
BLAST of ClCG03G011460 vs. NCBI nr
Match: XP_038896600.1 (uncharacterized protein LOC120084860 [Benincasa hispida]) HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34 Identity = 76/116 (65.52%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of ClCG03G011460 vs. NCBI nr
Match: KAA0057475.1 (uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa] >TYK30171.1 uncharacterized protein E5676_scaffold216G001590 [Cucumis melo var. makuwa]) HSP 1 Score: 154.1 bits (388), Expect = 7.5e-34 Identity = 72/115 (62.61%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of ClCG03G011460 vs. NCBI nr
Match: KGN65684.1 (hypothetical protein Csa_019689 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33 Identity = 70/116 (60.34%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of ClCG03G011460 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of ClCG03G011460 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 78/110 (70.91%), Postives = 94/110 (85.45%), Query Frame = 0
BLAST of ClCG03G011460 vs. ExPASy TrEMBL
Match: A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34 Identity = 72/115 (62.61%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of ClCG03G011460 vs. ExPASy TrEMBL
Match: A0A0A0LXB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496800 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.2e-34 Identity = 70/116 (60.34%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of ClCG03G011460 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30 Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 0
BLAST of ClCG03G011460 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.2e-30 Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|