Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACAACACACAACCAACATGATCCCATTGACGATGACAATCAAAATGGCGATGATCACGGTCGTCATGAGGAGGATCCTACCACCATATCCACCATCGATCCCACCACCGAGCCCACCATCAAGCAGACCATTAAGCCCACCACCACCACCACCATTAAGCTTCCTACTACCATCCCTACCACCGAGATTCCTACCACCACCACCACCAAGCTTCCCACCACCACTGAGCTTCATACTACCACCATCGATCCCACCACCACCTCTGATCTACCTATCACCACCACCGAGCTACCTATCATCACCATAGAGCCTACCACCACCACTACCACCATTACTACCATTGATCGTACCGTTATAGTACTTGATCATCCCAAGCTACTCCCACTTCCACCTCTAGCAAAAAGATTGAAGGTCAAGAATGAGAACGATGCATCACAATTGAAGAAGTCGATGATTATTGGTGAACCTAAGCTATGA mRNA sequence ATGACAACACACAACCAACATGATCCCATTGACGATGACAATCAAAATGGCGATGATCACGGTCGTCATGAGGAGGATCCTACCACCATATCCACCATCGATCCCACCACCGAGCCCACCATCAAGCAGACCATTAAGCCCACCACCACCACCACCATTAAGCTTCCTACTACCATCCCTACCACCGAGATTCCTACCACCACCACCACCAAGCTTCCCACCACCACTGAGCTTCATACTACCACCATCGATCCCACCACCACCTCTGATCTACCTATCACCACCACCGAGCTACCTATCATCACCATAGAGCCTACCACCACCACTACCACCATTACTACCATTGATCGTACCGTTATAGTACTTGATCATCCCAAGCTACTCCCACTTCCACCTCTAGCAAAAAGATTGAAGGTCAAGAATGAGAACGATGCATCACAATTGAAGAAGTCGATGATTATTGGTGAACCTAAGCTATGA Coding sequence (CDS) ATGACAACACACAACCAACATGATCCCATTGACGATGACAATCAAAATGGCGATGATCACGGTCGTCATGAGGAGGATCCTACCACCATATCCACCATCGATCCCACCACCGAGCCCACCATCAAGCAGACCATTAAGCCCACCACCACCACCACCATTAAGCTTCCTACTACCATCCCTACCACCGAGATTCCTACCACCACCACCACCAAGCTTCCCACCACCACTGAGCTTCATACTACCACCATCGATCCCACCACCACCTCTGATCTACCTATCACCACCACCGAGCTACCTATCATCACCATAGAGCCTACCACCACCACTACCACCATTACTACCATTGATCGTACCGTTATAGTACTTGATCATCCCAAGCTACTCCCACTTCCACCTCTAGCAAAAAGATTGAAGGTCAAGAATGAGAACGATGCATCACAATTGAAGAAGTCGATGATTATTGGTGAACCTAAGCTATGA Protein sequence MTTHNQHDPIDDDNQNGDDHGRHEEDPTTISTIDPTTEPTIKQTIKPTTTTTIKLPTTIPTTEIPTTTTTKLPTTTELHTTTIDPTTTSDLPITTTELPIITIEPTTTTTTITTIDRTVIVLDHPKLLPLPPLAKRLKVKNENDASQLKKSMIIGEPKL
Homology
BLAST of ClCG03G009820 vs. ExPASy TrEMBL
Match: A0A421AW08 (Uncharacterized protein OS=Actinokineospora cianjurensis OX=585224 GN=CLV68_6095 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 9.2e-04 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 28 TTISTIDPTTEPTIKQTIKPTTTTTIKLPTTIPTTEIPTTTTTKL-PTTT--ELHTTTID 87 TT +T+ PTT T T+ PTTTTT PTT TT PTTTTT + PTTT E TTT++ Sbjct: 176 TTTTTVPPTTTTTTTTTVPPTTTTTTVEPTTTTTTVAPTTTTTTVEPTTTTVEPTTTTVE 235
Query: 88 PTTTSDLPITTTELP--IITIEPTTTTTTITTIDRT 119 PTTT+ P TTT +P TIEPTTTTTT+ T Sbjct: 236 PTTTTVEPTTTTVVPTTTTTIEPTTTTTTVAPTTTT 271
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A421AW08 | 9.2e-04 | 55.21 | Uncharacterized protein OS=Actinokineospora cianjurensis OX=585224 GN=CLV68_6095... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..29 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..39 |
Relationships
The following mRNA feature(s) are a part of this gene:
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