ClCG03G009460 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G009460
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr03: 12708618 .. 12709899 (-)
RNA-Seq Expression	ClCG03G009460
Synteny	ClCG03G009460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGGTTAGATTTGTATTTCTTCTTCCGCTTGTATTTTTGTATTCATAATAATTGATCGCTTAGATATAATAAGCGATCGTTCAATAATTATAAGCGATCGCTTAGTATACTATGCTACCGCTTAATAGTTATATGCGATTGCCCACGAGTTACAAACAATCGCTTAGAAATCATACGCTTATGACTGCTAAGCAATCGCTTGGAAACTGCTAAACGATTGCTTAGATATGCTAAACAATCGCTTAGCAGTTGTATGCGATCGTTTAGTTTTTTTTATGCGATCGCTTAGCAATTATCTAACCTATTGATATATTTGTCTGATTCAGGGTAATGAAGATGAAGAAGACAATCAAAAAAGTTACCTCGACGATAATGGAAACGACAACGGGGAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCGTCTGATCTAACTTAAACCAAAGGAAACGATGACAGTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGCTCCCCACTCAATCATTAACATGAGAAGCATTGTTGACTTGAACACGCCAGCCGAAGTGGCTGGGGTATTTCTTTAATTTGATGTACATATCATTTGCATGTATATGTATACTAACTGAGTTTCCATTTTGTATAAGAAAAGAAGGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGGTTTTCACCTGAGGATGTGAAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC

mRNA sequence

CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC

Coding sequence (CDS)

CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC

Protein sequence

HPTSIRHKHSQTYKVLKEEISATRNDLANFTTMVLEQHDHLSKQIDNLRMFIERLHQNEGGGGDRQAEEGCGRGHEGSGEAMAIMVYNQPTEEETNIASDQEVPPIDPPTTQPPPSVEEIHSEVIPDCRKRNKPTRDRRGSQRTLSLTQHPPIPSQPHPNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNFPNLNPNPCPNLNLNLNPNLPNQLYLNPNLPNQL

Homology

[Close]

BLAST of ClCG03G009460 vs. NCBI nr
Match: REF06767.1 (hypothetical protein C7428_3562 [Pantoea ananatis])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-05
Identity = 47/75 (62.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 154 PSQPHPNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNFPNLNPNPCPNLNLNLNP 213
           P+ P+PN     NP+  +PNPNLN +LNPNLNPNLN +LNPN PNLNPNP  N NLN NP
Sbjct: 12  PANPNPNP----NPN-LNPNPNLNPNLNPNLNPNLNPNLNPN-PNLNPNPNLNPNLNPNP 71

Query: 214 NLPNQLYLNPNL-PN 228
           N      LNPNL PN
Sbjct: 72  NPNPNPNLNPNLNPN 80

[Close]

BLAST of ClCG03G009460 vs. NCBI nr
Match: XP_022919441.1 (angiotensin-converting enzyme [Onthophagus taurus])

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-05
Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 173 NPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLNPNL-PNQLYLNPNL-PNQL 230
           NPNLN +LNPNLNPNLN +LNPN  PNLNPN  PNLN NLNPN  PN    NPNL PN L
Sbjct: 49  NPNLNPNLNPNLNPNLNPNLNPNLNPNLNPNLNPNLNRNLNPNFNPN---FNPNLNPNTL 105

[Close]

BLAST of ClCG03G009460 vs. NCBI nr
Match: VWU48761.1 (conserved protein, unknown function [Hepatocystis sp. ex Piliocolobus tephrosceles])

HSP 1 Score: 58.5 bits (140), Expect = 8.5e-05
Identity = 41/64 (64.06%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 165  LNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLNPNLPNQL--YL 224
            LNP+    NPN+N ++NPN+NPNLN +LNPN  PNLNPN  PNLN NLNPNL   L   L
Sbjct: 1203 LNPNM---NPNMNPNMNPNMNPNLNPNLNPNLNPNLNPNLNPNLNPNLNPNLNPSLNPSL 1262

Query: 225  NPNL 226
            NPNL
Sbjct: 1263 NPNL 1263

[Close]

BLAST of ClCG03G009460 vs. NCBI nr
Match: VWU51126.1 (conserved protein, unknown function [Hepatocystis sp. ex Piliocolobus tephrosceles])

HSP 1 Score: 56.6 bits (135), Expect = 3.2e-04
Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 159 PNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLNPNL-P 218
           PN    LNPS    NPNLN +LNP+LNPNLN +LNPN  PNLNPN   NLN NLNP+L P
Sbjct: 863 PNVYTNLNPSL---NPNLNPNLNPSLNPNLNSNLNPNLNPNLNPNLNSNLNPNLNPSLNP 922

Query: 219 NQLYLNPNL-PN 228
           N   LNPNL PN
Sbjct: 923 N---LNPNLNPN 928

[Close]

BLAST of ClCG03G009460 vs. NCBI nr
Match: PWK06027.1 (hypothetical protein C7421_11123 [Pantoea ananatis])

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-04
Identity = 44/76 (57.89%), Postives = 51/76 (67.11%), Query Frame = 0


Query: 154 PSQPHPNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLN 213
           P+ P+PN     NP+  +PNPN N + NPNLNPNLN +LNPN  PNLNPN  PN NLN N
Sbjct: 12  PANPNPNPNPNPNPN-PNPNPNPNPNPNPNLNPNLNPNLNPNLNPNLNPNLNPNPNLNPN 71

Query: 214 PNLPNQLYLNPNLPNQ 229
           PNL      NPN PN+
Sbjct: 72  PNLNPNPNPNPN-PNR 85

[Close]

BLAST of ClCG03G009460 vs. ExPASy TrEMBL
Match: A0A653GY85 (Uncharacterized protein OS=Hepatocystis sp. ex Piliocolobus tephrosceles OX=2600580 GN=HEP_00069100 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.1e-05
Identity = 41/64 (64.06%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 165  LNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLNPNLPNQL--YL 224
            LNP+    NPN+N ++NPN+NPNLN +LNPN  PNLNPN  PNLN NLNPNL   L   L
Sbjct: 1203 LNPNM---NPNMNPNMNPNMNPNLNPNLNPNLNPNLNPNLNPNLNPNLNPNLNPSLNPSL 1262

Query: 225  NPNL 226
            NPNL
Sbjct: 1263 NPNL 1263

[Close]

BLAST of ClCG03G009460 vs. ExPASy TrEMBL
Match: A0A653HKW5 (Uncharacterized protein OS=Hepatocystis sp. ex Piliocolobus tephrosceles OX=2600580 GN=HEP_00308300 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-04
Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 159 PNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNF-PNLNPNPCPNLNLNLNPNL-P 218
           PN    LNPS    NPNLN +LNP+LNPNLN +LNPN  PNLNPN   NLN NLNP+L P
Sbjct: 863 PNVYTNLNPSL---NPNLNPNLNPSLNPNLNSNLNPNLNPNLNPNLNSNLNPNLNPSLNP 922

Query: 219 NQLYLNPNL-PN 228
           N   LNPNL PN
Sbjct: 923 N---LNPNLNPN 928

The following BLAST results are available for this feature:

BLAST of ClCG03G009460 vs. NCBI nr


Match Name	E-value	Identity	Description
REF06767.1	1.7e-05	62.67	hypothetical protein C7428_3562 [Pantoea ananatis]	[more]
XP_022919441.1	6.5e-05	71.67	angiotensin-converting enzyme [Onthophagus taurus]	[more]
VWU48761.1	8.5e-05	64.06	conserved protein, unknown function [Hepatocystis sp. ex Piliocolobus tephroscel...	[more]
VWU51126.1	3.2e-04	65.28	conserved protein, unknown function [Hepatocystis sp. ex Piliocolobus tephroscel...	[more]
PWK06027.1	4.2e-04	57.89	hypothetical protein C7421_11123 [Pantoea ananatis]	[more]

BLAST of ClCG03G009460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG03G009460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A653GY85	4.1e-05	64.06	Uncharacterized protein OS=Hepatocystis sp. ex Piliocolobus tephrosceles OX=2600...	[more]
A0A653HKW5	1.6e-04	65.28	Uncharacterized protein OS=Hepatocystis sp. ex Piliocolobus tephrosceles OX=2600...	[more]

BLAST of ClCG03G009460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G009460.1	ClCG03G009460.1	mRNA