ClCG03G008800 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTTTATAGTTCAAATTCAAGTACAGTAGAAGAATCTTCACGTCCTACTTCTACAGCTATAGTTAGTTCTTCAACTACAAGGCGAGATGGATCGGAAGTAGTAGTTTAACTTCTCTTGTTCATAGGAAAGATCGATATCTCAAGTTTGAAGAGTTTGTTAACAATGTGGAAAATGTTGACAATGTCAAATCAGAGCTAGATCATTATTTACTGAGACTCTTCTACCGCGTTCGAATGACTTTAACATTTTGCAATGGTAGAAGTTGAATAGAGTACAGTATCCTACTTTGTATCAAATTGCTAAAGATATTCTTGCTATTCTTGTCACTACTTTATGAATCTGCATTTAGAATTGGTTGTAGACATGTAGGTCCTCATCGTTCTCAAATCCATGCAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCCATGGGCTGAAGGTATGAATTAATATTATCACTTAATTTATTTGAAATTTTTTTTTTATTACCATTTAATGAACTCTTACTGATGCACATTTACCTAATTATATTTGTACGTGTCTTAATAGATAAGCATACTACCATAGATGCTAGAGTTTTGAAAAATGTTCTTGAAGATCGAGATCCAGATGATGTGAGTTATTAGTTTGTGTATTCTTATTGTTTTTTTTTTTTTTTTAATATTGACTTCTAATAATTTGTACAATGTTTATTTCTTTTTTTTTTTTTTTTTCCAGAATCATCTCTTACAAAGTTGGATGAAATTCATTGATGGTTTAACTTGGCTATATTGTAAGTTGTGACTTGTCTTAAAATAAACTATGTTGTTGTAACTTAGACTTGTGATTTATGAACCTTTGTTATAATTGAAGACTTTGTTAGGATTATTATGGATGTTATAATTATGTAAGTTTAGGATTTTATTTGCTTTAATTGCTTAAATGTTGTAATATCTAAAGATAGTATATTCTAATCTTTGAATTCTAATTTTTATAAATCATGAGAATTTAGCATTTTAATTATATCTTTTTTAAATAACATATGTATTATTGTTTTTATTAGTAAAATTGATCGTTTTTTATTTAAATGAAAATTGTAAAGGAAGTGCTTAAATTAAATAATTGTTAAAAAAAAAAAAAAAACTTAATTGAACTAAAAAAAATTGTTAAATTTCTCCAAAAAAAAATGTTAAAAAAATTAAGGCGGAGAAATTTTCCCCGTGGGGAATGATTCCGCGAGGATGGGGAATGGAATGGGGGGCAGGGACGGGGATGGGGACGGGGAAGGCTTTCCCATCCCCGCCCCATCCCATGGACATCTCTACTCGGGGGTCGATTGTTGATCGCCTTAAACATGTAGGTGTTGAGAATTTCTCTGACAAAAATGTGTCTTGCGAGATGAAAGCTAAAAAAGGAAGTGTCCATAGTGCAACCATAAAGAGGAGGGGGTCGATATCCCCCGTGTCAATTTGGCATCGCATTAGGCACGAAGATGCCGAAAATCATTCAAGTGAGAAGCCACCTCATGAGACAAAGGGGGAAGGAGAGATTCACAATGTCGTCCCTTAA ATGAAGTTTTATAGTTCAAATTCAAGTACAGTAGAAGAATCTTCACGTCCTACTTCTACAGCTATAGTTAGTTCTTCAACTACAAGGCGAGATGGATCGGAATTTGAAGAGTTTGTTAACAATGTGGAAAATGTTGACAATGTCAAATCAGAGCTAGATCATTATTTACTGAGACTCTTCTACCGCGTTCGAATGACTTTAACATTTTGCAATGGTCCTCATCGTTCTCAAATCCATGCAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCCATGGGCTGAAGATAAGCATACTACCATAGATGCTAGAGTTTTGAAAAATGTTCTTGAAGATCGAGATCCAGATGATGCGGAGAAATTTTCCCCGTGGGGAATGATTCCGCGAGGATGGGGAATGGAATGGGGGGCAGGGACGGGGATGGGGACGGGGAAGGCTTTCCCATCCCCGCCCCATCCCATGGACATCTCTACTCGGGGGTCGATTGTTGATCGCCTTAAACATGTAGGTGTTGAGAATTTCTCTGACAAAAATGTGTCTTGCGAGATGAAAGCTAAAAAAGGAAGTGTCCATAGTGCAACCATAAAGAGGAGGGGGTCGATATCCCCCGTGTCAATTTGGCATCGCATTAGGCACGAAGATGCCGAAAATCATTCAAGTGAGAAGCCACCTCATGAGACAAAGGGGGAAGGAGAGATTCACAATGTCGTCCCTTAA ATGAAGTTTTATAGTTCAAATTCAAGTACAGTAGAAGAATCTTCACGTCCTACTTCTACAGCTATAGTTAGTTCTTCAACTACAAGGCGAGATGGATCGGAATTTGAAGAGTTTGTTAACAATGTGGAAAATGTTGACAATGTCAAATCAGAGCTAGATCATTATTTACTGAGACTCTTCTACCGCGTTCGAATGACTTTAACATTTTGCAATGGTCCTCATCGTTCTCAAATCCATGCAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCCATGGGCTGAAGATAAGCATACTACCATAGATGCTAGAGTTTTGAAAAATGTTCTTGAAGATCGAGATCCAGATGATGCGGAGAAATTTTCCCCGTGGGGAATGATTCCGCGAGGATGGGGAATGGAATGGGGGGCAGGGACGGGGATGGGGACGGGGAAGGCTTTCCCATCCCCGCCCCATCCCATGGACATCTCTACTCGGGGGTCGATTGTTGATCGCCTTAAACATGTAGGTGTTGAGAATTTCTCTGACAAAAATGTGTCTTGCGAGATGAAAGCTAAAAAAGGAAGTGTCCATAGTGCAACCATAAAGAGGAGGGGGTCGATATCCCCCGTGTCAATTTGGCATCGCATTAGGCACGAAGATGCCGAAAATCATTCAAGTGAGAAGCCACCTCATGAGACAAAGGGGGAAGGAGAGATTCACAATGTCGTCCCTTAA MKFYSSNSSTVEESSRPTSTAIVSSSTTRRDGSEFEEFVNNVENVDNVKSELDHYLLRLFYRVRMTLTFCNGPHRSQIHANLLEALMCTQDWPWAEDKHTTIDARVLKNVLEDRDPDDAEKFSPWGMIPRGWGMEWGAGTGMGTGKAFPSPPHPMDISTRGSIVDRLKHVGVENFSDKNVSCEMKAKKGSVHSATIKRRGSISPVSIWHRIRHEDAENHSSEKPPHETKGEGEIHNVVP Homology
BLAST of ClCG03G008800 vs. NCBI nr
Match: TYJ98100.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]) HSP 1 Score: 116.3 bits (290), Expect = 3.6e-22 Identity = 80/175 (45.71%), Postives = 94/175 (53.71%), Query Frame = 0
BLAST of ClCG03G008800 vs. NCBI nr
Match: KAA0043375.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 1.8e-21 Identity = 79/173 (45.66%), Postives = 92/173 (53.18%), Query Frame = 0
BLAST of ClCG03G008800 vs. NCBI nr
Match: XP_038892387.1 (uncharacterized protein LOC120081507 [Benincasa hispida] >XP_038892394.1 uncharacterized protein LOC120081507 [Benincasa hispida]) HSP 1 Score: 90.1 bits (222), Expect = 2.8e-14 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of ClCG03G008800 vs. NCBI nr
Match: XP_038902461.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Benincasa hispida]) HSP 1 Score: 56.6 bits (135), Expect = 3.4e-04 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of ClCG03G008800 vs. NCBI nr
Match: KAF1881813.1 (hypothetical protein Lal_00042522 [Lupinus albus]) HSP 1 Score: 55.1 bits (131), Expect = 9.8e-04 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of ClCG03G008800 vs. ExPASy TrEMBL
Match: A0A5D3BE31 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00110 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22 Identity = 80/175 (45.71%), Postives = 94/175 (53.71%), Query Frame = 0
BLAST of ClCG03G008800 vs. ExPASy TrEMBL
Match: A0A5A7TPN2 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00380 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 8.6e-22 Identity = 79/173 (45.66%), Postives = 92/173 (53.18%), Query Frame = 0
BLAST of ClCG03G008800 vs. ExPASy TrEMBL
Match: A0A6A5NEK9 (Dimer_Tnp_hAT domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00042522 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of ClCG03G008800 vs. ExPASy TrEMBL
Match: A0A2N9G3A3 (TIR domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21835 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.1e-04 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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