ClCG03G008390 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G008390
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr03: 9799792 .. 9800257 (-)
RNA-Seq ExpressionClCG03G008390
SyntenyClCG03G008390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGAGCTACACCAACATTTTGGAGAAAGAGCGAAGCTGCAATAGCATTTTGGATAGGAGTCGAAGCTACACCCACATTTTGGAGAAGTGAAGCTACATCAGTATATTAGAGAGGGAGCAAAGTTGCACTAACAATTTAGAGAGGAGGTGGAGCTGTAGCAACATTTTGATAAGAAGCTAAGTTGAACTACCATTTTCGATAGGAAATGAAGCTGCACCAGCATTTTAGAGTTGAAGCAAAACCACATTAGCATGTTAGAGAGGGAGCGAAGCTACACCAACAATTTAGAGAGGGGGCAGAGCTGCACCAACATTTTGGAGAAGGAGCTAAGCTGCACTACCATTTTGGAAAGGAGACGAAGTTGCACCACCATTTTGGAGTTGAAGCGAAGTCGCACCAACATTTTGGAAAGGAGGCGAAGTTGTACCAACATTTTGGAGAGGAGGTGAAGTTGCGCTAA

mRNA sequence

ATGAGCCGGAGCTACACCAACATTTTGGAGAAAGAGCGAAGCTGCAATAGCATTTTGGATAGGAGTCGAAGCTACACCCACATTTTGGAGAAAGAGGGAGCGAAGCTACACCAACAATTTAGAGAGGGGGCAGAGCTGCACCAACATTTTGGAGAAGGAGCTAAGCTGCACTACCATTTTGGAAAGGAGACGAAGTTGCACCACCATTTTGGAGTTGAAGCGAAGTCGCACCAACATTTTGGAAAGGAGGCGAAGTTGTACCAACATTTTGGAGAGGAGGTGAAGTTGCGCTAA

Coding sequence (CDS)

ATGAGCCGGAGCTACACCAACATTTTGGAGAAAGAGCGAAGCTGCAATAGCATTTTGGATAGGAGTCGAAGCTACACCCACATTTTGGAGAAAGAGGGAGCGAAGCTACACCAACAATTTAGAGAGGGGGCAGAGCTGCACCAACATTTTGGAGAAGGAGCTAAGCTGCACTACCATTTTGGAAAGGAGACGAAGTTGCACCACCATTTTGGAGTTGAAGCGAAGTCGCACCAACATTTTGGAAAGGAGGCGAAGTTGTACCAACATTTTGGAGAGGAGGTGAAGTTGCGCTAA

Protein sequence

MSRSYTNILEKERSCNSILDRSRSYTHILEKEGAKLHQQFREGAELHQHFGEGAKLHYHFGKETKLHHHFGVEAKSHQHFGKEAKLYQHFGEEVKLR
Homology
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BLAST of ClCG03G008390 vs. NCBI nr
Match: XP_038887242.1 (LWamide neuropeptides-like [Benincasa hispida])

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-05
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0 

Query: 32  EGAKLHQQFREGAELHQHFGEGAKLHYHFGKETKLHHHFGVEAKSHQHFGKEAKLYQHFG 91
           E AK HQ F + A+LHQ+  + AK H + G E KLH + G E KSHQ+ G EAK +Q+ G
Sbjct: 53  EKAKPHQYFGDEAKLHQYLEDKAKPHQYLGDEVKLHQYLGDETKSHQYLGDEAKPHQYLG 112

Query: 92  EEVK 96
           +E K
Sbjct: 113 DEAK 116

The following BLAST results are available for this feature:
BLAST of ClCG03G008390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887242.12.1e-0550.00LWamide neuropeptides-like [Benincasa hispida][more]
BLAST of ClCG03G008390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG03G008390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG03G008390 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G008390.1ClCG03G008390.1mRNA