ClCG03G008060 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G008060
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ethylene-responsive transcription factor 12
Location	CG_Chr03: 9201424 .. 9201894 (-)
RNA-Seq Expression	ClCG03G008060
Synteny	ClCG03G008060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACTCGCGATGGGCACTACAGAGGCGTTCGAAAGAGGCCATGGGGTCGTTACGCCGCTGAAATACGCGATCCTTGGAAGAAAACCCGTGTCTGGTTAGGCACTTTCGATACTCCGGAAGAAGCCGCCCTTGCTTACGACGGCGCCGCCAGATCTCTCCGCGGCTCCAAAGCCAAAACCAACTTCCCTCCTCCCGTCACCGGTCTGTCCCTCGACCTCAACGTTTCCGGTCCTTGGCCAAACGTCACCACCGCCGCCTCCGCACCTTCCTCTTCTGCTCGTTTTCTCCTCGGAGATTTCCTCCGCCATGGGGCCCGAAATGACATGTGCAATCTCAATGTGGAAGCCTCTTCGGTACTGGTGGACTCGAGCGCTCCAGTGACCACCGCTACGGCGTCGTTTATTGGGCACGTGCGACGGGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGA

mRNA sequence

ATGGCTTCCACTCGCGATGGGCACTACAGAGGCGTTCGAAAGAGGCCATGGGGTCGTTACGCCGCTGAAATACGCGATCCTTGGAAGAAAACCCGTGTCTGGTTAGGCACTTTCGATACTCCGGAAGAAGCCGCCCTTGCTTACGACGGCGCCGCCAGATCTCTCCGCGGCTCCAAAGCCAAAACCAACTTCCCTCCTCCCGTCACCGGTCTGTCCCTCGACCTCAACGTTTCCGGTCCTTGGCCAAACGTCACCACCGCCGCCTCCGCACCTTCCTCTTCTGCTCGTTTTCTCCTCGGAGATTTCCTCCGCCATGGGGCCCGAAATGACATGTGCAATCTCAATGTGGAAGCCTCTTCGGTACTGGTGGACTCGAGCGCTCCAGTGACCACCGCTACGGCGTCGTTTATTGGGCACGTGCGACGGGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGA

Coding sequence (CDS)

ATGGCTTCCACTCGCGATGGGCACTACAGAGGCGTTCGAAAGAGGCCATGGGGTCGTTACGCCGCTGAAATACGCGATCCTTGGAAGAAAACCCGTGTCTGGTTAGGCACTTTCGATACTCCGGAAGAAGCCGCCCTTGCTTACGACGGCGCCGCCAGATCTCTCCGCGGCTCCAAAGCCAAAACCAACTTCCCTCCTCCCGTCACCGGTCTGTCCCTCGACCTCAACGTTTCCGGTCCTTGGCCAAACGTCACCACCGCCGCCTCCGCACCTTCCTCTTCTGCTCGTTTTCTCCTCGGAGATTTCCTCCGCCATGGGGCCCGAAATGACATGTGCAATCTCAATGTGGAAGCCTCTTCGGTACTGGTGGACTCGAGCGCTCCAGTGACCACCGCTACGGCGTCGTTTATTGGGCACGTGCGACGGGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGA

Protein sequence

MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPVTGLSLDLNVSGPWPNVTTAASAPSSSARFLLGDFLRHGARNDMCNLNVEASSVLVDSSAPVTTATASFIGHVRRGLPFDLNEPPPVWL

Homology

[Close]

BLAST of ClCG03G008060 vs. NCBI nr
Match: XP_038895107.1 (ethylene-responsive transcription factor 12 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTAASAPSSSARFLLGDFLRHGARNDMCNLNVEASS 120
           KTNFPPPV GLSLDLNVS PWP VT+AA+APSSSARFLLGDFLRHGARNDMCNLN EAS 
Sbjct: 61  KTNFPPPVPGLSLDLNVSSPWPTVTSAAAAPSSSARFLLGDFLRHGARNDMCNLNAEASP 120

Query: 121 VLVDSSAPVT-TATASFIGHVRRGLPFDLNEPPPVWL 157
           VL+DSSA  T TAT SFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 VLLDSSAASTATATTSFIGHVRRGLPFDLNEPPPVWL 157

[Close]

BLAST of ClCG03G008060 vs. NCBI nr
Match: XP_008442801.1 (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA0057008.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa] >TYK26435.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 7.2e-72
Identity = 139/163 (85.28%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA-----ASAPSSSARFLLGDFLRHGARNDMCNLN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A     +S+ SSSARFLLGDFLRHG RNDMCNLN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNLN 120

Query: 121 VEASS-VLVDSSAPV-TTATASFIGHVRRGLPFDLNEPPPVWL 157
           V+A+S VLVD+SA   +TA+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 VDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of ClCG03G008060 vs. NCBI nr
Match: XP_004146616.1 (ethylene-responsive transcription factor 12 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA------ASAPS-SSARFLLGDFLRHGARNDMCN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A      +S+PS SS RFLLGDFLRHG RND+CN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120

Query: 121 LNVEASSVLVDSSAP-VTTATASFIGHVRRGLPFDLNEPPPVWL 157
           LNV+AS VLVDSSA   +TA+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of ClCG03G008060 vs. NCBI nr
Match: KAE8652722.1 (hypothetical protein Csa_014191 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 2.6e-69
Identity = 136/161 (84.47%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA------ASAPS-SSARFLLGDFLRHGARNDMCN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A      +S+PS SS RFLLGDFLRHG RND+CN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120

Query: 121 LNVEASSVLVDSSAP-VTTATASFIGHVRRGLPFDLNEPPP 154
           LNV+AS VLVDSSA   +TA+ASFIGHVRRGLPFDLNEPPP
Sbjct: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 161

[Close]

BLAST of ClCG03G008060 vs. NCBI nr
Match: XP_023001756.1 (ethylene-responsive transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 130/163 (79.75%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGP-----WPNVTTA--ASAPSSSARFLLGDFLRHGARNDMCN 120
           KTNFPPP   LSLDLNVS       WP+ + A  +S+ SSSAR LLGDFLRHGARND+CN
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLCN 120

Query: 121 LNVEASSVLVDSSAPVTTATASFIGHVRRGLPFDLNEPPPVWL 157
           +NVEAS  LVDS  P    TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 VNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-38
Identity = 103/193 (53.37%), Postives = 113/193 (58.55%), Query Frame = 0


Query: 1   MAST---RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   R+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPVTGLSLDLNVSGPWPNVTTAAS-----------------APSSSARFLLG 120
            KAKTNFP P   LSLDLN     P+  TAA+                  P SS      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 D--FLRHGARNDMCNLNVEASSVLVDSSAPVTTATAS----FIGH-----------VRRG 157
              FLR G  ND  +      + L  +S+P  TAT+S     +G            VRRG
Sbjct: 121 HRIFLRTGVLNDKTSDYSSTEAPLYFTSSP-NTATSSPGYQVVGFPMMNSSPSPVTVRRG 180

[Close]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 5   RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           ++ H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65  PPPVTGLSLDLNVSG---PWPNVTTAASA 91
           P P  G S  +N  G    + N TT  +A
Sbjct: 89  PLP--GESTTVNDGGENDSYVNRTTVTTA 115

[Close]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-24
Identity = 76/196 (38.78%), Postives = 98/196 (50.00%), Query Frame = 0


Query: 4   TRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           +++  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPV----------------------------------TGLSLDLNV---SGPWPNVTT 123
           FP P                                   T  S+   V   SGP P    
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRPPPAP 142

Query: 124 AASAPSSSARFLLGDFLRHGARNDMCNLNVEASSVLVD--------SSAPVTTATASFIG 155
                +SS ++            D C+ + ++SS +VD         +     A++SF  
Sbjct: 143 RQQTTASSRKYTRSP----PVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSF-- 202

[Close]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 52/68 (76.47%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPPVTGLS 73
          P P    S
Sbjct: 83 PSPTENQS 90

[Close]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-23
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPP 68
          P P
Sbjct: 83 PLP 85

[Close]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 139/163 (85.28%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA-----ASAPSSSARFLLGDFLRHGARNDMCNLN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A     +S+ SSSARFLLGDFLRHG RNDMCNLN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNLN 120

Query: 121 VEASS-VLVDSSAPV-TTATASFIGHVRRGLPFDLNEPPPVWL 157
           V+A+S VLVD+SA   +TA+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 VDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 139/163 (85.28%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA-----ASAPSSSARFLLGDFLRHGARNDMCNLN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A     +S+ SSSARFLLGDFLRHG RNDMCNLN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNLN 120

Query: 121 VEASS-VLVDSSAPV-TTATASFIGHVRRGLPFDLNEPPPVWL 157
           V+A+S VLVD+SA   +TA+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 VDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72
Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGPWPNVTTA------ASAPS-SSARFLLGDFLRHGARNDMCN 120
           KTNFPPP+ GLSLDLNVSGPWP  T+A      +S+PS SS RFLLGDFLRHG RND+CN
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDICN 120

Query: 121 LNVEASSVLVDSSAP-VTTATASFIGHVRRGLPFDLNEPPPVWL 157
           LNV+AS VLVDSSA   +TA+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL
Match: A0A6J1KJH9 (ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111495799 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 130/163 (79.75%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGP-----WPNVTTA--ASAPSSSARFLLGDFLRHGARNDMCN 120
           KTNFPPP   LSLDLNVS       WP+ + A  +S+ SSSAR LLGDFLRHGARND+CN
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLCN 120

Query: 121 LNVEASSVLVDSSAPVTTATASFIGHVRRGLPFDLNEPPPVWL 157
           +NVEAS  LVDS  P    TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 VNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL
Match: A0A6J1EKE1 (ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111434133 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 133/169 (78.70%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPVTGLSLDLNVSGP-----WPNVTT---AASAPSSS-----ARFLLGDFLRHGA 120
           KTNFPPP   LSLDLNVS       WP+ ++   AA+APSSS     AR LLGDFLRHGA
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHGA 120

Query: 121 RNDMCNLNVEASSVLVDSSAPVTTATASFIGHVRRGLPFDLNEPPPVWL 157
           RND+CN+NVEAS  LVDSS P    TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 RNDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 166

[Close]

BLAST of ClCG03G008060 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39
Identity = 103/193 (53.37%), Postives = 113/193 (58.55%), Query Frame = 0


Query: 1   MAST---RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   R+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPVTGLSLDLNVSGPWPNVTTAAS-----------------APSSSARFLLG 120
            KAKTNFP P   LSLDLN     P+  TAA+                  P SS      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 D--FLRHGARNDMCNLNVEASSVLVDSSAPVTTATAS----FIGH-----------VRRG 157
              FLR G  ND  +      + L  +S+P  TAT+S     +G            VRRG
Sbjct: 121 HRIFLRTGVLNDKTSDYSSTEAPLYFTSSP-NTATSSPGYQVVGFPMMNSSPSPVTVRRG 180

[Close]

BLAST of ClCG03G008060 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25
Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 5   RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           ++ H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65  PPPVTGLSLDLNVSG---PWPNVTTAASA 91
           P P  G S  +N  G    + N TT  +A
Sbjct: 89  PLP--GESTTVNDGGENDSYVNRTTVTTA 115

[Close]

BLAST of ClCG03G008060 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24
Identity = 70/159 (44.03%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 9   YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFP--- 68
           YRGVRKRPWGRYAAEIRDP+KK+RVWLGTFDTPEEAA AYD  A   RG+KAKTNFP   
Sbjct: 20  YRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYN 79

Query: 69  ------PPVTGLSLDLNVSGPWPNVTTAASAPSSSARFLLGDFLRHGARNDMCNLNVEAS 128
                      LS    V   +PN+   + + SS              R     + V+A 
Sbjct: 80  INAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSS--------------RFPFPKIQVKAG 139

Query: 129 SVLVD-----SSAPVTTATASFIGHVRRGLPFDLNEPPP 154
            ++ D      S+ V      + G  R  L  DLN PPP
Sbjct: 140 MMVFDERSESDSSSVVMDVVRYEGR-RVVLDLDLNFPPP 163

[Close]

BLAST of ClCG03G008060 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 3  STRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S ++  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP 66
          NFP
Sbjct: 82 NFP 84

[Close]

BLAST of ClCG03G008060 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 3  STRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          + ++  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19 NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63 NFP 66
          NFP
Sbjct: 79 NFP 81

The following BLAST results are available for this feature:

BLAST of ClCG03G008060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895107.1	4.4e-77	91.72	ethylene-responsive transcription factor 12 [Benincasa hispida]	[more]
XP_008442801.1	7.2e-72	85.28	PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA005700...	[more]
XP_004146616.1	1.2e-71	84.76	ethylene-responsive transcription factor 12 [Cucumis sativus]	[more]
KAE8652722.1	2.6e-69	84.47	hypothetical protein Csa_014191 [Cucumis sativus]	[more]
XP_023001756.1	2.2e-65	79.75	ethylene-responsive transcription factor 12 [Cucurbita maxima]	[more]

BLAST of ClCG03G008060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID6	4.1e-38	53.37	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9FE67	4.4e-24	67.42	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9SXS8	9.9e-24	38.78	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q40477	2.2e-23	76.47	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	3.8e-23	80.95	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of ClCG03G008060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSV2	3.5e-72	85.28	Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B631	3.5e-72	85.28	ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
A0A0A0LSE4	5.9e-72	84.76	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=...	[more]
A0A6J1KJH9	1.1e-65	79.75	ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EKE1	1.1e-65	78.70	ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of ClCG03G008060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28360.1	2.9e-39	53.37	ERF domain protein 12	[more]
AT5G44210.1	3.2e-25	67.42	erf domain protein 9	[more]
AT1G28370.1	2.7e-24	44.03	ERF domain protein 11	[more]
AT1G50640.1	3.5e-24	77.78	ethylene responsive element binding factor 3	[more]
AT3G15210.1	1.0e-23	79.37	ethylene responsive element binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 9..20 score: 66.67 coord: 31..47 score: 70.59
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 8..71 e-value: 2.3E-36 score: 136.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..57 e-value: 1.5E-14 score: 54.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 8..65 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 8..65 e-value: 5.14921E-31 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 8..66 e-value: 2.2E-27 score: 96.9
None	No IPR available	PANTHER	PTHR31677:SF116	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE	coord: 1..146
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..146
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G008060.1	ClCG03G008060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity