Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAGAAAAAAGAAAAAAAAAGTGTGAGATGAAGAAAACTCAAGCCAAACGACAGCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAAGAAGGCGGCGGCGGTGACGGCGGTGCCGGCCAAGGTCATGACTCCTTCATCACTCAATTTCAAGACATTTCGCCATCGCCGTCGTTAAACCCTCCCCGGCCGCCACCGCCGCCGCCTCCTCCGCCACTTGTTCCAATAATCACGCCGCCGTGTGACTATGCTTCTTGGTCAAATAATCTTCCGTTATTCCCAACTCTTGAATTCATTCCCCCGCCTTTACCAACCGCCGCCGCCGCCGCTTCCTCCGCCAAAAAACCCTTGTTTCCAACAACCCGAATATCCGATTCCCAATTGAATTTTCCTTCGCATTTTTTCCCTAGCTTTCAATATTCTGCTTCTTCTCTCAATCTTGAATATTGTAATTCAATGGTGAGACAAGATGGAAAAAATTGTGAAATATTTTATGGATCTTCAAAATGAATTATATTAAATTACTGGAAATAAATTTTTCAGGTGAATATTAATCCAGGATCTGCCTCTTCGTATCCGTCAGCCACGTCATCGGCGGCGAGATATTTTCGTCAAATAGAGCACCCTTCAAGCCAAATATCAACTGATTTCAACAACATATGGACCTCACCGGAAGAACAAGAAAAGGCAAAATTACTTCTCACCTCTTTTTCTTTTAATTTTTATTTATTTCCAAAATGTCCAAACATATTTTTAAATTTACCAACCTAAAATACTCTCTCATTGGTTAATTAATATATGATTTTGTTTAATAATAGTTACTAATAAGTATATATATACGTGTGTGTGTGTGTGTGTGTGTTTAAATGTTAATTGACAGATGGTTAGTGCAAAGAGAGTGAGACCCTTTTTGGAAGAAAGCCATAGGGAAGGAAATGTAGAGAGCAGAGATCCAATTTTGACAAACATGGCAACAAAAGACTCATCTCCCTCTTCTTCTTCTTCTTCAATGGAAATGAATCCTTCTCCATTTCATTTCGATTCAAACTTCAGGTTGTCTTATTTCTTTCAATATCTCCTCTTTTTAGTTTTACTTTTAATTCAATAATGTTTTGTTTTAATCAAAATTTTGGGTACATTTGATCGAAGAATTTTTGGAAGTGGATTATGATTTATGCGCAATAAACCAAAGTGTTAATAGAGAGGCTAGAGTATTAAAAATCAAATCTTTATGCAAAATATTTTTTTTTTTTTTTAAATCTTTTGCACAATATAAATGATAAAAAGTATATTGTGTATTTAGTTTTAAATGTTGGTTTGGAACGTTGCAGATATATTTAGAAAATGGAGGGAAAAAATGTAAATAAACAACCCAAAAAATAAAAAGCTAGTAGAAACATTAAAACTTGGGATAAACTACCGTTTTATAACTCAAATCATTAAGATTAAGATTTTAGTAAAAAACACATGGGATTAGAGTTATTGATGTATGATATATGTCTAAACGAATTAAGGTATGCTCTTGTTCGTGAATAAAACATTTAATCTTTATTTATTTTTTTTTTTCAATTAATAGTGATAAATGTGTAAACAAGGGAAAGGGAAAAGATAAAGGTTGGTTATTTGGCTATTAATTTTGTTATTAGTATTATTATTATTTTGTGTGTGTAGGGGTACAAAAAGGGGTTTTGTTGGGCAGTTAATGAGCTCTATCAAAAGTAGTGGAAGCTATCAATTAGCAGAAGACAACAAATTGATGGTATTAGGATCTTCATCATCATCAGCTCCTAATGAAATTGCACCATTCAATTTCCATCTCCCCCAAGTAAGAATTATGTTTTCAACATTTTTTCTTCTTTTAACTTTATTTAACCTATGCATAATATGATCAACTCAGTTGAATTTGTGAATTTAATCTTGGAAAAGCTATAATTTCATCCATTAAACCCTAGTCTTAAATTAGGCAACCAAAATTTCAATACCCTTCTTTAAATCTTAATTTTAAAAACCCCAAAATTTGACCAAACAAAATATTCCAAATCAAGCCAGCTAGAAAAATGCTTAAACCTAAAAACATATGTCTAATCCAATACCAAAATGTCTGAAATCCAACCAAAAACAAACACCCAACATAGCTACAAAATGCACCTAAAAAATTAGCATCTCCCAGATTACTATAAGGAAAGTTTTCATTTTTTTTTTCAATCTTTATTCTAAATCAAAATTAAATTTTTATTGAATTGAATTGAATTCTAGACTTAGACTAAATGGTAGTATTAATAATTTTCTAAAATATTAGACAAAGTAATGGCTAATTAATTAAATTATAATCATTGATATATATTTAGTATGTTCTTTTCCTTTTTTAAATATTTGGAATTATTCTAAATATTTGCCGTCACGCCCTTTCTATTGTTAAGTTTGTGAGCATTATTTTATCTGATTTCATGATTATTTTCGGGTTTAAATATTTCAAGCATTTTCTAATTTAGTTTTTAAAGAGTGTTAATTTTTTAATACTACTTTGGTAATTCTACTTTGAAATCTGGTTTATTTTAGTTTTTGTACTTTCAAAATGTCCACATTAGTCCTTATGTTTTTAATTTTAGTTCATTCATTTTCATTTTTTAGGAGAAATTATCACCTTTTAGAAGTATAGGGACTAAAACGAACTAAGTCAAAAGTATAAGGATCAAATTGAACATTTTGAAAGTATAGGGGCCAAAATGATGATCCCTTCATTTTCATTTTTAAGGAAAAAAATTATCACTTTTTAGAAATATAGGGACCAAAATGAACTAAAGTTGATGTTACAAAAATTAAAATAGACATTTTAAAAGTACAAGATCCAAAATGAACCGAAATTAAAATTACAGGGACCAAAATCGAAAATACAAAAATTAAAGTAGTATTTAAATCTAAAATTAAAAGCGATAAATATTTAGTTTAAATAATATATATGAAGAGGGCAAGAATGGAAATTAACTAAGTGGAGAAATTATTTTGAAGGAAACTATGGAGGCTTCACAGCATATAGATGAAGGAGGATGTGCCTCAGATTACTACAAAGTTACATTTAACTCCTCCTCCTTTTATGAATCAAACTCAAACTCAAACTCAAAGGGCAACAAAGGCATTACCATCGGCTCTAAAGCCGGAGCCCGAGCCGAAGTCGAAGCCGAAGCTGAAGCCGAAGGCATCGATCTGAATTTGAAGCTGTAATTGTTTGTTTTGAACGAAAAAGCTTTGACAAAAGAGAGATTGCGATGCAATTTTATACCCAAAAATATAAGCATACATACAAACTAAGGCTCTTAATTTCTCCAATATTTAGTTGTAGACTACTTGTAGTTTTAGTTTTAGAGAGCTACATTTTAATAGACGGTTCCATGTGTTAACTTTAGAGCTAATTTAAGATAAATTATATGCAAAATCGTAAGTGGTGGGAGTCAAACGTGAGTATACTCCAACGATAATTGACTTGTATTTTGAGGTCAGATAATTAAGTTTACATGTTCTACATTTGACGT
mRNA sequence
AAAAAAAAAAGAAAAAAGAAAAAAAAAGTGTGAGATGAAGAAAACTCAAGCCAAACGACAGCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAAGAAGGCGGCGGCGGTGACGGCGGTGCCGGCCAAGGTCATGACTCCTTCATCACTCAATTTCAAGACATTTCGCCATCGCCGTCGTTAAACCCTCCCCGGCCGCCACCGCCGCCGCCTCCTCCGCCACTTGTTCCAATAATCACGCCGCCGTGTGACTATGCTTCTTGGTCAAATAATCTTCCGTTATTCCCAACTCTTGAATTCATTCCCCCGCCTTTACCAACCGCCGCCGCCGCCGCTTCCTCCGCCAAAAAACCCTTGTTTCCAACAACCCGAATATCCGATTCCCAATTGAATTTTCCTTCGCATTTTTTCCCTAGCTTTCAATATTCTGCTTCTTCTCTCAATCTTGAATATTGTAATTCAATGGTGAATATTAATCCAGGATCTGCCTCTTCGTATCCGTCAGCCACGTCATCGGCGGCGAGATATTTTCGTCAAATAGAGCACCCTTCAAGCCAAATATCAACTGATTTCAACAACATATGGACCTCACCGGAAGAACAAGAAAAGATGGTTAGTGCAAAGAGAGTGAGACCCTTTTTGGAAGAAAGCCATAGGGAAGGAAATGTAGAGAGCAGAGATCCAATTTTGACAAACATGGCAACAAAAGACTCATCTCCCTCTTCTTCTTCTTCTTCAATGGAAATGAATCCTTCTCCATTTCATTTCGATTCAAACTTCAGGGGTACAAAAAGGGGTTTTGTTGGGCAGTTAATGAGCTCTATCAAAAGTAGTGGAAGCTATCAATTAGCAGAAGACAACAAATTGATGGTATTAGGATCTTCATCATCATCAGCTCCTAATGAAATTGCACCATTCAATTTCCATCTCCCCCAAGAAACTATGGAGGCTTCACAGCATATAGATGAAGGAGGATGTGCCTCAGATTACTACAAAGTTACATTTAACTCCTCCTCCTTTTATGAATCAAACTCAAACTCAAACTCAAAGGGCAACAAAGGCATTACCATCGGCTCTAAAGCCGGAGCCCGAGCCGAAGTCGAAGCCGAAGCTGAAGCCGAAGGCATCGATCTGAATTTGAAGCTGTAATTGTTTGTTTTGAACGAAAAAGCTTTGACAAAAGAGAGATTGCGATGCAATTTTATACCCAAAAATATAAGCATACATACAAACTAAGGCTCTTAATTTCTCCAATATTTAGTTGTAGACTACTTGTAGTTTTAGTTTTAGAGAGCTACATTTTAATAGACGGTTCCATGTGTTAACTTTAGAGCTAATTTAAGATAAATTATATGCAAAATCGTAAGTGGTGGGAGTCAAACGTGAGTATACTCCAACGATAATTGACTTGTATTTTGAGGTCAGATAATTAAGTTTACATGTTCTACATTTGACGT
Coding sequence (CDS)
ATGAAGAAAACTCAAGCCAAACGACAGCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAAGAAGGCGGCGGCGGTGACGGCGGTGCCGGCCAAGGTCATGACTCCTTCATCACTCAATTTCAAGACATTTCGCCATCGCCGTCGTTAAACCCTCCCCGGCCGCCACCGCCGCCGCCTCCTCCGCCACTTGTTCCAATAATCACGCCGCCGTGTGACTATGCTTCTTGGTCAAATAATCTTCCGTTATTCCCAACTCTTGAATTCATTCCCCCGCCTTTACCAACCGCCGCCGCCGCCGCTTCCTCCGCCAAAAAACCCTTGTTTCCAACAACCCGAATATCCGATTCCCAATTGAATTTTCCTTCGCATTTTTTCCCTAGCTTTCAATATTCTGCTTCTTCTCTCAATCTTGAATATTGTAATTCAATGGTGAATATTAATCCAGGATCTGCCTCTTCGTATCCGTCAGCCACGTCATCGGCGGCGAGATATTTTCGTCAAATAGAGCACCCTTCAAGCCAAATATCAACTGATTTCAACAACATATGGACCTCACCGGAAGAACAAGAAAAGATGGTTAGTGCAAAGAGAGTGAGACCCTTTTTGGAAGAAAGCCATAGGGAAGGAAATGTAGAGAGCAGAGATCCAATTTTGACAAACATGGCAACAAAAGACTCATCTCCCTCTTCTTCTTCTTCTTCAATGGAAATGAATCCTTCTCCATTTCATTTCGATTCAAACTTCAGGGGTACAAAAAGGGGTTTTGTTGGGCAGTTAATGAGCTCTATCAAAAGTAGTGGAAGCTATCAATTAGCAGAAGACAACAAATTGATGGTATTAGGATCTTCATCATCATCAGCTCCTAATGAAATTGCACCATTCAATTTCCATCTCCCCCAAGAAACTATGGAGGCTTCACAGCATATAGATGAAGGAGGATGTGCCTCAGATTACTACAAAGTTACATTTAACTCCTCCTCCTTTTATGAATCAAACTCAAACTCAAACTCAAAGGGCAACAAAGGCATTACCATCGGCTCTAAAGCCGGAGCCCGAGCCGAAGTCGAAGCCGAAGCTGAAGCCGAAGGCATCGATCTGAATTTGAAGCTGTAA
Protein sequence
MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHDSFITQFQDISPSPSLNPPRPPPPPPPPPLVPIITPPCDYASWSNNLPLFPTLEFIPPPLPTAAAAASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSATSSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPILTNMATKDSSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLAEDNKLMVLGSSSSSAPNEIAPFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYESNSNSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL
Homology
BLAST of ClCG03G007900 vs. NCBI nr
Match:
XP_038895159.1 (uncharacterized protein DDB_G0271670-like [Benincasa hispida])
HSP 1 Score: 517.7 bits (1332), Expect = 8.5e-143
Identity = 306/388 (78.87%), Postives = 318/388 (81.96%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHDSFITQFQDISPSPSLNPP 60
MKK QAKRQRIPRRGPGVAELEKILKEQEG A Q S Q + P SLNPP
Sbjct: 1 MKKAQAKRQRIPRRGPGVAELEKILKEQEG----AAAAQDIIS-PPQPTNTHPLSSLNPP 60
Query: 61 RPPPPPPPPPLVPIITPPCDY-ASWSNNLPLFPTLEFIPPPLP-TAAAAASSAKKPLFPT 120
RPPPPPPPPPLV P DY ASWSNNLPLFPTLEFIPPPLP +AAA +SAKKPLFPT
Sbjct: 61 RPPPPPPPPPLV----PTTDYNASWSNNLPLFPTLEFIPPPLPNSAAAVTASAKKPLFPT 120
Query: 121 TRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSATSSAARYFRQIEH 180
TRISDSQL F HFFPSFQYSASSLN+E NSMVNINPGSASS PSATSSA RYFR+IEH
Sbjct: 121 TRISDSQLKFAPHFFPSFQYSASSLNVECYNSMVNINPGSASSCPSATSSAGRYFREIEH 180
Query: 181 PSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPILTNMATKD----- 240
PSSQIS+DFNNIWTSPEEQEKMVSAKRVR FLEESHRE N+ES+ PI NMATKD
Sbjct: 181 PSSQISSDFNNIWTSPEEQEKMVSAKRVRAFLEESHREANIESKGPIFKNMATKDSSSSS 240
Query: 241 --SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLAEDNKLMVLGSS 300
SS SSSSSSMEMN SPF+FDSNFRGTKRGF GQLMSS K SGSYQLAED+ LM LGSS
Sbjct: 241 SSSSSSSSSSSMEMNHSPFNFDSNFRGTKRGFAGQLMSSTKRSGSYQLAEDSNLMALGSS 300
Query: 301 SSSAPNEIAPFNFHLPQETMEASQHIDEGGCASDYYKVTFN-SSSFYESNSNSNSKGNKG 360
SSSAPNEIA FNFHLPQETMEASQH D GGC SDYYKVTFN SSS YE SNSNSKGNK
Sbjct: 301 SSSAPNEIAAFNFHLPQETMEASQHRD-GGCVSDYYKVTFNSSSSMYE--SNSNSKGNKE 360
Query: 361 ITIGSKAGARAEVEAEAEAEGIDLNLKL 379
IGS AGA A+VE EAEA+GIDLNLKL
Sbjct: 361 TVIGSGAGAGAQVEDEAEADGIDLNLKL 376
BLAST of ClCG03G007900 vs. NCBI nr
Match:
XP_023001726.1 (trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima] >XP_023001727.1 trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima])
HSP 1 Score: 419.9 bits (1078), Expect = 2.4e-113
Identity = 270/397 (68.01%), Postives = 292/397 (73.55%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGH-------DSFITQFQDISP 60
MKKT KR RIPRRGPGVAELEKILKEQEGG G G GQ SF + SP
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQEGGNGGGNGGQDQADISSLPPSFFQHRRRHSP 60
Query: 61 S---PSLNPPRPPPPPPPPPLVPIITPPC--DYASWSNNLPLFPTLEFIPP--PLPTAAA 120
S SLNPPRPPPPPPPPPL+P PP DYASWS NLPLFPTL+FIPP P PT AA
Sbjct: 61 SNTPSSLNPPRPPPPPPPPPLLP---PPLTRDYASWS-NLPLFPTLDFIPPALPTPTPAA 120
Query: 121 AASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSAT 180
AA++A+KPLFPTTR SD+Q+N P HFFP+FQYSASS NL M+NI PG SAT
Sbjct: 121 AAAAAEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNL-----MMNIIPG------SAT 180
Query: 181 SSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPIL 240
S A RY+RQIEHPSSQIST FN+ WTSPEEQ+KMVSAKRVRPFL+E HR+ N ESR P
Sbjct: 181 SPATRYYRQIEHPSSQISTQFNHTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFF 240
Query: 241 TNMATKD---SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLA-ED 300
TNMATK+ SS SSSSSSM+MN SPF+ DSN RGTKRGF G+LM K S YQLA E
Sbjct: 241 TNMATKESSSSSSSSSSSSMDMNRSPFNLDSNSRGTKRGFGGELMRCSKRSERYQLAGEV 300
Query: 301 NKLMVLGSSSSSAPNEI-APFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYESNS 360
+ LM LG SSSSAPNE+ A FN H PQETMEASQ+ DEGG ASDY KVTFNSSS S
Sbjct: 301 SHLMALG-SSSSAPNEVAAAFNIHHPQETMEASQYRDEGGSASDYNKVTFNSSS--SSLY 360
Query: 361 NSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
S SKGNK I IGS EVEAEAEAEGIDLNLKL
Sbjct: 361 ESKSKGNKEIVIGS----AFEVEAEAEAEGIDLNLKL 375
BLAST of ClCG03G007900 vs. NCBI nr
Match:
XP_031738182.1 (uncharacterized protein LOC105434463 [Cucumis sativus] >XP_031738184.1 uncharacterized protein LOC105434463 [Cucumis sativus] >KGN64713.1 hypothetical protein Csa_013361 [Cucumis sativus])
HSP 1 Score: 411.4 bits (1056), Expect = 8.5e-111
Identity = 263/401 (65.59%), Postives = 293/401 (73.07%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDG--GAGQGHDSFITQFQDISPSP-SL 60
M+KTQAKRQRIPRRGPGVAELEKILKEQE G H + + + P SL
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHQHTSSPHTNSTSTAATTTTHPLSL 60
Query: 61 NPPRPPPPPPPPPLVPIITP-----PCDYASWSNNLPLFPTLEFIPPP-LPTAAAAASSA 120
NPPRPPPPPPPPPLV I+TP P DY +WSNNLPLFPTLEFIPPP LPT
Sbjct: 61 NPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPTVV-----T 120
Query: 121 KKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNL-EYCNSMVNINPGSASSYPSATSSAA 180
+KPLFPTTR+S+SQLN +F PSFQYSASS N +Y N MVN+N GS SS PSATSS+A
Sbjct: 121 EKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSA 180
Query: 181 -RYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHRE-------GNVESR 240
R+FR+IEHPSSQISTDFNNIW SPEE+EKMV+AKRV PFLEESHRE N+ +
Sbjct: 181 GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEESHREEANNNNNNNIIEK 240
Query: 241 DPILTN-MATKDSSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQ-LMSSIKSSGSYQLA 300
+ N M TKDSS SSSSSSME N SPFHF SNFRGTKRG GQ MS+ K SG YQL
Sbjct: 241 MRVENNIMGTKDSS-SSSSSSMETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLG 300
Query: 301 -EDNKLMVLGSSSSSAPNEIAPFN-FHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYE 360
+++ LM LGSSSSSAPNEI FN FHLPQETME QH DEGGC SDYYK+ FNSS +
Sbjct: 301 DQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLY-- 360
Query: 361 SNSNSNSKGNKGI-TIGSKAGARAEVEAEAEAEGIDLNLKL 379
SNSN+KGN+ + I S AG+ EAEAEAEGIDLNLKL
Sbjct: 361 -ESNSNTKGNREVGMISSGAGS----EAEAEAEGIDLNLKL 388
BLAST of ClCG03G007900 vs. NCBI nr
Match:
XP_022927210.1 (nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927212.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927213.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata])
HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-109
Identity = 265/397 (66.75%), Postives = 286/397 (72.04%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHD---------SFITQFQDI 60
MKKTQ KR RIPRRGPGVAELEKILKEQEGG G G G D SF +
Sbjct: 1 MKKTQPKRHRIPRRGPGVAELEKILKEQEGGDGGGNGNGGQDQADISSLPPSFFQHRRRH 60
Query: 61 SPS---PSLNPPRPPPPPPPPPLVPIITPPC--DYASWSNNLPLFPTLEFIPPPLPTAAA 120
SPS SLNPPRPPPPPPPPPL+P PP DYASWS NLPLFPTL+FIPP LPT
Sbjct: 61 SPSNTPSSLNPPRPPPPPPPPPLLP---PPLTRDYASWS-NLPLFPTLDFIPPALPTPTP 120
Query: 121 AASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSAT 180
AA++ +KPLFPTTR SD+Q+N P HFFP+FQYSASS N M+NI PG SAT
Sbjct: 121 AAAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASS-----HNPMMNIIPG------SAT 180
Query: 181 SSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPIL 240
S AARY+RQIEHPSSQIST FNN WTSPEEQ+KMVSAKRVRPFL+E HR+ N ESR P
Sbjct: 181 SPAARYYRQIEHPSSQISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFF 240
Query: 241 TNMATKD---SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLA-ED 300
TNMATK+ SS SSSSSSM+MN SPF DSN RGTKRGF G+LM K S YQLA E
Sbjct: 241 TNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEV 300
Query: 301 NKLMVLGSSSSSAPNEI-APFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYESNS 360
+ LM LG SSSSAPNE+ A FN H PQET EASQ+ D GG ASDY KVTFNSSS S
Sbjct: 301 SHLMALG-SSSSAPNEVAAAFNIHHPQETTEASQYRD-GGSASDYNKVTFNSSS--SSLY 360
Query: 361 NSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
S KGNK I IGS EVEAEAEAEGIDL+LKL
Sbjct: 361 ESKLKGNKEIVIGS----GFEVEAEAEAEGIDLSLKL 374
BLAST of ClCG03G007900 vs. NCBI nr
Match:
KAG6583971.1 (hypothetical protein SDJN03_19903, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 403.7 bits (1036), Expect = 1.8e-108
Identity = 265/399 (66.42%), Postives = 290/399 (72.68%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEG--GGGDGGAGQGHDS------FITQFQDIS 60
MKKT KR RIPRRGPGVAELEKILKEQ+G GGG+GG Q H S F + + S
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGHGGGNGGQDQAHISSLPPSFFQHRRRRHS 60
Query: 61 PS---PSLNPPRPPPPPPPPPLVPIITPPC--DYASWSNNLPLFPTLEFIPPPLPT---A 120
PS SLNPPRPPPPPPPPPL+P PP DYASWS NLPLFPTL+FIPP LPT
Sbjct: 61 PSNTPSSLNPPRPPPPPPPPPLLP---PPLTRDYASWS-NLPLFPTLDFIPPALPTPTPT 120
Query: 121 AAAASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPS 180
AAA++ +KPLFPTTR SD+Q+N P HFFP+FQYSASS NL M+NI PG S
Sbjct: 121 PAAAAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNL-----MMNIIPG------S 180
Query: 181 ATSSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDP 240
ATS AARY+RQIEHPSSQIST FNN WTSPEEQ+KMVSAKRVRPFL+E HR+ N ESR P
Sbjct: 181 ATSPAARYYRQIEHPSSQISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAP 240
Query: 241 ILTNMATKD---SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLA- 300
TNMATK+ SS SSSSSSM+MN SP DSN RGTKRGF G+LM K S YQLA
Sbjct: 241 FFTNMATKESSSSSSSSSSSSMDMNRSPLDLDSNSRGTKRGFGGELMRCSKRSERYQLAG 300
Query: 301 EDNKLMVLGSSSSSAPNEI-APFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYES 360
E + LM LG SSSSAPNE+ A FN H PQETMEASQ+ D GG ASDY +VTFNSSS S
Sbjct: 301 EVSHLMALG-SSSSAPNEVAAAFNIHHPQETMEASQYRDGGGSASDYNRVTFNSSS--SS 360
Query: 361 NSNSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
S KGNK I IGS EVE EAEAEGIDL+LKL
Sbjct: 361 LYESKLKGNKEIVIGS----GFEVEVEAEAEGIDLSLKL 377
BLAST of ClCG03G007900 vs. ExPASy TrEMBL
Match:
A0A6J1KHF7 (trinucleotide repeat-containing gene 18 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495777 PE=4 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 1.2e-113
Identity = 270/397 (68.01%), Postives = 292/397 (73.55%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGH-------DSFITQFQDISP 60
MKKT KR RIPRRGPGVAELEKILKEQEGG G G GQ SF + SP
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQEGGNGGGNGGQDQADISSLPPSFFQHRRRHSP 60
Query: 61 S---PSLNPPRPPPPPPPPPLVPIITPPC--DYASWSNNLPLFPTLEFIPP--PLPTAAA 120
S SLNPPRPPPPPPPPPL+P PP DYASWS NLPLFPTL+FIPP P PT AA
Sbjct: 61 SNTPSSLNPPRPPPPPPPPPLLP---PPLTRDYASWS-NLPLFPTLDFIPPALPTPTPAA 120
Query: 121 AASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSAT 180
AA++A+KPLFPTTR SD+Q+N P HFFP+FQYSASS NL M+NI PG SAT
Sbjct: 121 AAAAAEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNL-----MMNIIPG------SAT 180
Query: 181 SSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPIL 240
S A RY+RQIEHPSSQIST FN+ WTSPEEQ+KMVSAKRVRPFL+E HR+ N ESR P
Sbjct: 181 SPATRYYRQIEHPSSQISTQFNHTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFF 240
Query: 241 TNMATKD---SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLA-ED 300
TNMATK+ SS SSSSSSM+MN SPF+ DSN RGTKRGF G+LM K S YQLA E
Sbjct: 241 TNMATKESSSSSSSSSSSSMDMNRSPFNLDSNSRGTKRGFGGELMRCSKRSERYQLAGEV 300
Query: 301 NKLMVLGSSSSSAPNEI-APFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYESNS 360
+ LM LG SSSSAPNE+ A FN H PQETMEASQ+ DEGG ASDY KVTFNSSS S
Sbjct: 301 SHLMALG-SSSSAPNEVAAAFNIHHPQETMEASQYRDEGGSASDYNKVTFNSSS--SSLY 360
Query: 361 NSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
S SKGNK I IGS EVEAEAEAEGIDLNLKL
Sbjct: 361 ESKSKGNKEIVIGS----AFEVEAEAEAEGIDLNLKL 375
BLAST of ClCG03G007900 vs. ExPASy TrEMBL
Match:
A0A0A0LSF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1)
HSP 1 Score: 411.4 bits (1056), Expect = 4.1e-111
Identity = 263/401 (65.59%), Postives = 293/401 (73.07%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDG--GAGQGHDSFITQFQDISPSP-SL 60
M+KTQAKRQRIPRRGPGVAELEKILKEQE G H + + + P SL
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHQHTSSPHTNSTSTAATTTTHPLSL 60
Query: 61 NPPRPPPPPPPPPLVPIITP-----PCDYASWSNNLPLFPTLEFIPPP-LPTAAAAASSA 120
NPPRPPPPPPPPPLV I+TP P DY +WSNNLPLFPTLEFIPPP LPT
Sbjct: 61 NPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPTVV-----T 120
Query: 121 KKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNL-EYCNSMVNINPGSASSYPSATSSAA 180
+KPLFPTTR+S+SQLN +F PSFQYSASS N +Y N MVN+N GS SS PSATSS+A
Sbjct: 121 EKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSA 180
Query: 181 -RYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHRE-------GNVESR 240
R+FR+IEHPSSQISTDFNNIW SPEE+EKMV+AKRV PFLEESHRE N+ +
Sbjct: 181 GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEESHREEANNNNNNNIIEK 240
Query: 241 DPILTN-MATKDSSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQ-LMSSIKSSGSYQLA 300
+ N M TKDSS SSSSSSME N SPFHF SNFRGTKRG GQ MS+ K SG YQL
Sbjct: 241 MRVENNIMGTKDSS-SSSSSSMETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLG 300
Query: 301 -EDNKLMVLGSSSSSAPNEIAPFN-FHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYE 360
+++ LM LGSSSSSAPNEI FN FHLPQETME QH DEGGC SDYYK+ FNSS +
Sbjct: 301 DQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLY-- 360
Query: 361 SNSNSNSKGNKGI-TIGSKAGARAEVEAEAEAEGIDLNLKL 379
SNSN+KGN+ + I S AG+ EAEAEAEGIDLNLKL
Sbjct: 361 -ESNSNTKGNREVGMISSGAGS----EAEAEAEGIDLNLKL 388
BLAST of ClCG03G007900 vs. ExPASy TrEMBL
Match:
A0A6J1EGJ1 (nuclear envelope pore membrane protein POM 121-like OS=Cucurbita moschata OX=3662 GN=LOC111434129 PE=4 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 1.0e-109
Identity = 265/397 (66.75%), Postives = 286/397 (72.04%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHD---------SFITQFQDI 60
MKKTQ KR RIPRRGPGVAELEKILKEQEGG G G G D SF +
Sbjct: 1 MKKTQPKRHRIPRRGPGVAELEKILKEQEGGDGGGNGNGGQDQADISSLPPSFFQHRRRH 60
Query: 61 SPS---PSLNPPRPPPPPPPPPLVPIITPPC--DYASWSNNLPLFPTLEFIPPPLPTAAA 120
SPS SLNPPRPPPPPPPPPL+P PP DYASWS NLPLFPTL+FIPP LPT
Sbjct: 61 SPSNTPSSLNPPRPPPPPPPPPLLP---PPLTRDYASWS-NLPLFPTLDFIPPALPTPTP 120
Query: 121 AASSAKKPLFPTTRISDSQLNFPSHFFPSFQYSASSLNLEYCNSMVNINPGSASSYPSAT 180
AA++ +KPLFPTTR SD+Q+N P HFFP+FQYSASS N M+NI PG SAT
Sbjct: 121 AAAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASS-----HNPMMNIIPG------SAT 180
Query: 181 SSAARYFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHREGNVESRDPIL 240
S AARY+RQIEHPSSQIST FNN WTSPEEQ+KMVSAKRVRPFL+E HR+ N ESR P
Sbjct: 181 SPAARYYRQIEHPSSQISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFF 240
Query: 241 TNMATKD---SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLMSSIKSSGSYQLA-ED 300
TNMATK+ SS SSSSSSM+MN SPF DSN RGTKRGF G+LM K S YQLA E
Sbjct: 241 TNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEV 300
Query: 301 NKLMVLGSSSSSAPNEI-APFNFHLPQETMEASQHIDEGGCASDYYKVTFNSSSFYESNS 360
+ LM LG SSSSAPNE+ A FN H PQET EASQ+ D GG ASDY KVTFNSSS S
Sbjct: 301 SHLMALG-SSSSAPNEVAAAFNIHHPQETTEASQYRD-GGSASDYNKVTFNSSS--SSLY 360
Query: 361 NSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
S KGNK I IGS EVEAEAEAEGIDL+LKL
Sbjct: 361 ESKLKGNKEIVIGS----GFEVEAEAEAEGIDLSLKL 374
BLAST of ClCG03G007900 vs. ExPASy TrEMBL
Match:
A0A1S3B6J8 (uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC103486731 PE=4 SV=1)
HSP 1 Score: 403.3 bits (1035), Expect = 1.1e-108
Identity = 264/402 (65.67%), Postives = 291/402 (72.39%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHDSFITQFQDISPSPSLNPP 60
M+KTQAKRQRIPRRGPGVAELEKILKEQE GG + T P SLNPP
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQHISPHTNSTSTATTHPL-SLNPP 60
Query: 61 RPPPPPPPPPLVPIIT-----PPCDYASWSNNLPLFPTLEFIPPP-LPTAAAAASSAKKP 120
PPPPPPPPPLV I+T PP DY SW+NNLPLFPTLEFIPPP LPT A A+KP
Sbjct: 61 LPPPPPPPPPLVQIMTPSPTPPPRDYVSWTNNLPLFPTLEFIPPPYLPTVA-----AEKP 120
Query: 121 LFPTTRISD-SQLNFPSHFFPSFQYSASSLNL-EYCNSMVNINPGSASSYPSATSSAA-R 180
LFPTTRIS+ SQLN +F P+FQ+SASS N +Y N MVNIN GS SS PSATSS+A R
Sbjct: 121 LFPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGR 180
Query: 181 YFRQIEHPSSQISTDFNNIWTSPEEQEKMVSAKRVRPFLEESHR-EGNVESRDPIL---- 240
Y R+IEHPSSQISTDFNNIWTSPEEQEKMV+AKRV PFLEESHR E N + + I+
Sbjct: 181 YLREIEHPSSQISTDFNNIWTSPEEQEKMVNAKRVIPFLEESHREEANNNNNNNIIEKMR 240
Query: 241 ---TNMATKD----SSPSSSSSSMEMNPSPFHFDSNFRGTKRGFVGQLM-SSIKSSGSYQ 300
M TKD SS SSSSSSME+N SPFH SNFRGTKRG GQLM ++ K SG YQ
Sbjct: 241 VENNTMGTKDSSSSSSSSSSSSSMEINCSPFHSHSNFRGTKRGSAGQLMKNNTKRSGRYQ 300
Query: 301 LA-EDNKLMVLGSSSSSAPNEIAPFN-FHLPQETMEASQHIDEGGCASDYYKVTFNSSSF 360
L +++ LM LGSSSSSAPNEI FN FHLP+ETME QH D GGC SD YK+ FNSS +
Sbjct: 301 LGDQESNLMALGSSSSSAPNEIPTFNIFHLPKETMEVPQHRD-GGCPSDNYKLNFNSSLY 360
Query: 361 YESNSNSNSKGNKGITIGSKAGARAEVEAEAEAEGIDLNLKL 379
SNSN+KGN+ I I S AGA EAEAE EGIDLNLKL
Sbjct: 361 ---ESNSNTKGNREIAISSGAGA----EAEAETEGIDLNLKL 388
BLAST of ClCG03G007900 vs. ExPASy TrEMBL
Match:
A0A5A7UM91 (CREB-regulated transcription coactivator 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002080 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 3.4e-57
Identity = 144/208 (69.23%), Postives = 156/208 (75.00%), Query Frame = 0
Query: 1 MKKTQAKRQRIPRRGPGVAELEKILKEQEGGGGDGGAGQGHDSFITQFQDISPSPSLNPP 60
M+KTQAKRQRIPRRGPGVAELEKILKEQE GG + T P SLNPP
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQHISPHTNSTSTATTHPL-SLNPP 60
Query: 61 RPPPPPPPPPLVPIIT-----PPCDYASWSNNLPLFPTLEFIPPP-LPTAAAAASSAKKP 120
PPPPPPPPPLV I+T PP DY SW+NNLPLFPTLEFIPPP LPT A A+KP
Sbjct: 61 LPPPPPPPPPLVQIMTPSPTPPPRDYVSWTNNLPLFPTLEFIPPPYLPTVA-----AEKP 120
Query: 121 LFPTTRISD-SQLNFPSHFFPSFQYSASSLNL-EYCNSMVNINPGSASSYPSATSSAA-R 180
LFPTTRIS+ SQLN +F P+FQ+SASS N +Y N MVNIN GS SS PSATSS+A R
Sbjct: 121 LFPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGR 180
Query: 181 YFRQIEHPSSQISTDFNNIWTSPEEQEK 200
Y R+IEHPSSQISTDFNNIWTSPEEQEK
Sbjct: 181 YLREIEHPSSQISTDFNNIWTSPEEQEK 202
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895159.1 | 8.5e-143 | 78.87 | uncharacterized protein DDB_G0271670-like [Benincasa hispida] | [more] |
XP_023001726.1 | 2.4e-113 | 68.01 | trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima] >XP_0230... | [more] |
XP_031738182.1 | 8.5e-111 | 65.59 | uncharacterized protein LOC105434463 [Cucumis sativus] >XP_031738184.1 uncharact... | [more] |
XP_022927210.1 | 2.1e-109 | 66.75 | nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022... | [more] |
KAG6583971.1 | 1.8e-108 | 66.42 | hypothetical protein SDJN03_19903, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KHF7 | 1.2e-113 | 68.01 | trinucleotide repeat-containing gene 18 protein-like OS=Cucurbita maxima OX=3661... | [more] |
A0A0A0LSF6 | 4.1e-111 | 65.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1 | [more] |
A0A6J1EGJ1 | 1.0e-109 | 66.75 | nuclear envelope pore membrane protein POM 121-like OS=Cucurbita moschata OX=366... | [more] |
A0A1S3B6J8 | 1.1e-108 | 65.67 | uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC10348673... | [more] |
A0A5A7UM91 | 3.4e-57 | 69.23 | CREB-regulated transcription coactivator 1-like OS=Cucumis melo var. makuwa OX=1... | [more] |
Match Name | E-value | Identity | Description | |