ClCG03G006670 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCAAGAAAACATTGCGACAAACGAGTTGCACGAGATTCAGATTGGAATCGATTATGTGATATCAATGGGAAAGAGAAGACCATCAGCATATTTTTGAAGCAAATACTAATTAAGGCTCGAGTTACTTCACCATTCACACATAGAGGTGGCATTATGACATTTTTACGCCATAAACAAAGAAAGGTATGCAACTCATTTGGTATCTCAATCTATTAACTTCACATCCTATAACTTTAGCTATAAACATGCAGAAAGAAGAAGACAAGAATTTAAGTGATATTGAGTTATTTGCGCTCACTCACAGTAGTGAGAAGAAGGGATGGGTGGATGATACTAAAAAAAGGAATTTA GCAAGAAAACATTGCGACAAACGAGTTGCACGAGATTCAGATTGGAATCGATTATGTGATATCAATGGGAAAGAGAAGACCATCAGCATATTTTTGAAGCAAATACTAATTAAGGCTCGAGTTACTTCACCATTCACACATAGAGGTGGCATTATGACATTTTTACGCCATAAACAAAGAAAGAAAGAAGAAGACAAGAATTTAAGTGATATTGAGTTATTTGCGCTCACTCACAGTAGTGAGAAGAAGGGATGGGTGGATGATACTAAAAAAAGGAATTTA GCAAGAAAACATTGCGACAAACGAGTTGCACGAGATTCAGATTGGAATCGATTATGTGATATCAATGGGAAAGAGAAGACCATCAGCATATTTTTGAAGCAAATACTAATTAAGGCTCGAGTTACTTCACCATTCACACATAGAGGTGGCATTATGACATTTTTACGCCATAAACAAAGAAAGAAAGAAGAAGACAAGAATTTAAGTGATATTGAGTTATTTGCGCTCACTCACAGTAGTGAGAAGAAGGGATGGGTGGATGATACTAAAAAAAGGAATTTA ARKHCDKRVARDSDWNRLCDINGKEKTISIFLKQILIKARVTSPFTHRGGIMTFLRHKQRKKEEDKNLSDIELFALTHSSEKKGWVDDTKKRNL Homology
BLAST of ClCG03G006670 vs. NCBI nr
Match: KAE8651942.1 (hypothetical protein Csa_006405 [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 1.7e-20 Identity = 56/92 (60.87%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of ClCG03G006670 vs. NCBI nr
Match: KAE8647269.1 (hypothetical protein Csa_018247 [Cucumis sativus]) HSP 1 Score: 67.4 bits (163), Expect = 7.5e-08 Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of ClCG03G006670 vs. NCBI nr
Match: KAA0032292.1 (hypothetical protein E6C27_scaffold219G001360 [Cucumis melo var. makuwa] >TYK13514.1 hypothetical protein E5676_scaffold745G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 4.6e-05 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of ClCG03G006670 vs. NCBI nr
Match: RVW68393.1 (hypothetical protein CK203_061681 [Vitis vinifera]) HSP 1 Score: 54.7 bits (130), Expect = 5.0e-04 Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 0
BLAST of ClCG03G006670 vs. NCBI nr
Match: RVX00842.1 (hypothetical protein CK203_026402 [Vitis vinifera]) HSP 1 Score: 54.7 bits (130), Expect = 5.0e-04 Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of ClCG03G006670 vs. ExPASy TrEMBL
Match: A0A0A0KDT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383550 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.9e-10 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of ClCG03G006670 vs. ExPASy TrEMBL
Match: A0A0A0LM17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G294860 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of ClCG03G006670 vs. ExPASy TrEMBL
Match: A0A5D3CR62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold745G00100 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.2e-05 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of ClCG03G006670 vs. ExPASy TrEMBL
Match: A0A438G848 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.4e-04 Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 0
BLAST of ClCG03G006670 vs. ExPASy TrEMBL
Match: A0A438IVS2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_026402 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.4e-04 Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|