ClCG03G005420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G005420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	B-box type zinc finger protein
Location	CG_Chr03: 5652925 .. 5653344 (+)
RNA-Seq Expression	ClCG03G005420
Synteny	ClCG03G005420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCATCACAAGAATCCGAATCCAATCCACGAGACTTGGAGTTGAAAATTATGAAGAAGATCAAGTGCGAGCTTTGCAATTGTAGAGCCAATGCGTATTGTGAATCGGACGAAGCCAGTTTGTGTTGGAGGTGCGACGCCAATGTTCATTCAGCCAATTTCATTGTGGAAAAGCATTCAAGGATTTTGCTATGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACCCTTTCCCTTTGTCAGTTTTGTGTTATTCCCCAAAATGTTGCCTCTCTACAAATTCATCATCATCAGGACAATCGCCATTCTGCTTCCCCCACCAGCAGAGACCTTGCTGACGATGATGAAGACAATCAAGTGGTTCCGTTGTCGCCGCCGCCAATTTCCAGCTAG

mRNA sequence

ATGCCCTCATCACAAGAATCCGAATCCAATCCACGAGACTTGGAGTTGAAAATTATGAAGAAGATCAAGTGCGAGCTTTGCAATTGTAGAGCCAATGCGTATTGTGAATCGGACGAAGCCAGTTTGTGTTGGAGGTGCGACGCCAATGTTCATTCAGCCAATTTCATTGTGGAAAAGCATTCAAGGATTTTGCTATGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACCCTTTCCCTTTGTCAGTTTTGTGTTATTCCCCAAAATGTTGCCTCTCTACAAATTCATCATCATCAGGACAATCGCCATTCTGCTTCCCCCACCAGCAGAGACCTTGCTGACGATGATGAAGACAATCAAGTGGTTCCGTTGTCGCCGCCGCCAATTTCCAGCTAG

Coding sequence (CDS)

ATGCCCTCATCACAAGAATCCGAATCCAATCCACGAGACTTGGAGTTGAAAATTATGAAGAAGATCAAGTGCGAGCTTTGCAATTGTAGAGCCAATGCGTATTGTGAATCGGACGAAGCCAGTTTGTGTTGGAGGTGCGACGCCAATGTTCATTCAGCCAATTTCATTGTGGAAAAGCATTCAAGGATTTTGCTATGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACCCTTTCCCTTTGTCAGTTTTGTGTTATTCCCCAAAATGTTGCCTCTCTACAAATTCATCATCATCAGGACAATCGCCATTCTGCTTCCCCCACCAGCAGAGACCTTGCTGACGATGATGAAGACAATCAAGTGGTTCCGTTGTCGCCGCCGCCAATTTCCAGCTAG

Protein sequence

MPSSQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDLADDDEDNQVVPLSPPPISS

Homology

[Close]

BLAST of ClCG03G005420 vs. NCBI nr
Match: XP_038895968.1 (zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 9.3e-63
Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKH 60
           MPSSQES+SNPRDLE KIMKKIKCELC+CRANAYCESD+ASLCW CDANVHSANFIVEKH
Sbjct: 1   MPSSQESDSNPRDLEFKIMKKIKCELCDCRANAYCESDQASLCWSCDANVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL 120
           SRILLCQICQSPTPWTATGPKLGPT+SLCQFCVIPQNV SLQI HHQ++RHSAS +SRD 
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTISLCQFCVIPQNVGSLQI-HHQNHRHSASSSSRDF 120

Query: 121 -----ADDDEDNQVVPLSPPPISS 140
                A DDE NQVVP+SPPP SS
Sbjct: 121 HHHHHAADDEQNQVVPMSPPPTSS 143

[Close]

BLAST of ClCG03G005420 vs. NCBI nr
Match: XP_008441923.1 (PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa] >TYK26363.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 120/142 (84.51%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMK IKCELC+CRANAYCESDEASLCW CD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCV+PQNVASLQ  HHQD+ HS S T+RD 
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQF-HHQDHLHSGSSTTRDF 120

Query: 121 ------ADDDEDNQVVPLSPPP 137
                 + DDE+NQVVPLSPPP
Sbjct: 121 DHRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of ClCG03G005420 vs. NCBI nr
Match: KAE8652697.1 (hypothetical protein Csa_014317 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 7.6e-57
Identity = 112/140 (80.00%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 4   SQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRI 63
           ++ESESNP DLELK MK IKCELC+CRANAYCESDE+SLCW CDANVHSANFIVEKHSRI
Sbjct: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185

Query: 64  LLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL--- 123
           LLCQICQSPTPWTATGPKLGPTLSLCQ CV+PQNVASL+   HQD  HS S T+RD    
Sbjct: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRF-RHQDPLHSGSSTTRDFDHH 245

Query: 124 -ADDDEDNQVVPLSPPPISS 140
             +DDE+NQVVPLSPPP+SS
Sbjct: 246 PNEDDEENQVVPLSPPPVSS 264

[Close]

BLAST of ClCG03G005420 vs. NCBI nr
Match: XP_023542180.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 21  KIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTATGP 80
           K KCELC  RAN YCESD+A+LCW CDANVHSANFIVEKHSR LLC ICQSPTPWTATG 
Sbjct: 2   KNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGR 61

Query: 81  KLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDLADDDEDNQVVPLSPPPISS 140
           KL PT+S+CQ C+  QN  +    +HQD   S+    RD  +DD++NQVVPLSPPP+SS
Sbjct: 62  KLSPTISVCQSCLNAQNNVA---DNHQD---SSDGYRRDNDNDDDENQVVPLSPPPVSS 114

[Close]

BLAST of ClCG03G005420 vs. NCBI nr
Match: KAG6573228.1 (putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012401.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.5 bits (410), Expect = 2.5e-36
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 19  MKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MKK KCELC  RAN YCESD+A+LCW CDANVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 1   MKK-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDLADDDEDNQVVPLSPPPIS 138
           G KL PT+S+CQ C+  QN  +    +HQD+ H      R   +DD++NQVVPLSPPP+S
Sbjct: 61  GRKLSPTISVCQSCLNAQNNVA---DNHQDSSHG----YRHDDNDDDENQVVPLSPPPVS 113

Query: 139 S 140
           S
Sbjct: 121 S 113

[Close]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 22 IKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPT 74
          + CELC   A  YCE+D A LC +CD  VHSANF+  +H R ++C  C+  T
Sbjct: 30 VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 23 KCELCNC-RANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQ-SPTPWTATGP 82
          +C+ C   +A  YC+SD A LC  CD NVHSAN + ++H+R LLC+ C   PT       
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC--- 63

Query: 83 KLGPTLSLCQFC 93
           +   +SLCQ C
Sbjct: 64 -MNENVSLCQGC 71

[Close]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 22 IKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPT 74
          ++CELC+  A+ +CE+D A LC +CD  VH ANF+  +H R +LC  CQ  T
Sbjct: 29 VRCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 24  CELC-NCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 83
           C+ C   R+  YC SD A LC  CD NVHSAN + ++HSR L+C+ C +         + 
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE- 64

Query: 84  GPTLSLCQFCVIP----QNVASLQIHHHQD-NRHSASPTSRDLA 122
              +SLCQ C       +N  +   H  Q  N +S  P+S +L+
Sbjct: 65  --RVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELS 105

[Close]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 40/125 (32.00%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 24  CELCNCRA-NAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQS-PTPWTATGPK 83
           C+ C   A   YCE+D A LC  CDA VH+AN +  +H R+ +CQ C+S P  +      
Sbjct: 16  CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK--- 75

Query: 84  LGPTLSLCQFCVIPQNVASLQIHHHQ---------DNRHSASPTSRDLADDDEDNQVVP- 137
                SLC  C    + A+     HQ         ++  S +P+  D  +D++D +V   
Sbjct: 76  -ADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSETDADNDEDDREVASW 135

[Close]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL
Match: A0A5A7UTR2 (B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00230 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 120/142 (84.51%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMK IKCELC+CRANAYCESDEASLCW CD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCV+PQNVASLQ  HHQD+ HS S T+RD 
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQF-HHQDHLHSGSSTTRDF 120

Query: 121 ------ADDDEDNQVVPLSPPP 137
                 + DDE+NQVVPLSPPP
Sbjct: 121 DHRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL
Match: A0A1S3B4I3 (B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 120/142 (84.51%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMK IKCELC+CRANAYCESDEASLCW CD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCV+PQNVASLQ  HHQD+ HS S T+RD 
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQF-HHQDHLHSGSSTTRDF 120

Query: 121 ------ADDDEDNQVVPLSPPP 137
                 + DDE+NQVVPLSPPP
Sbjct: 121 DHRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL
Match: A0A0A0LS80 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 101/125 (80.80%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 19  MKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MK IKCELC+CRANAYCESDE+SLCW CDANVHSANFIVEKHSRILLCQICQSPTPWTAT
Sbjct: 1   MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDL----ADDDEDNQVVPLSP 138
           GPKLGPTLSLCQ CV+PQNVASL+   HQD  HS S T+RD      +DDE+NQVVPLSP
Sbjct: 61  GPKLGPTLSLCQLCVLPQNVASLRF-RHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSP 120

Query: 139 PPISS 140
           PP+SS
Sbjct: 121 PPVSS 124

[Close]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL
Match: A0A6J1GR34 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111456702 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.6e-34
Identity = 79/121 (65.29%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 19  MKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MKK KCELC  RAN YCESD+A+LCW CDANVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 1   MKK-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDLADDDEDNQVVPLSPPPIS 138
           G KL PT+S+CQ C+  QN  +    +HQD+            DDDE+ QVVPLSP P+S
Sbjct: 61  GRKLSPTISVCQSCLNAQNNVA---DNHQDS-----------GDDDEEYQVVPLSPLPVS 106

Query: 139 S 140
           S
Sbjct: 121 S 106

[Close]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL
Match: A0A6J1JY69 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489941 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.8e-34
Identity = 78/121 (64.46%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 19  MKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MKK KCELC  RAN YCESD+A+LCW CDANVHSANFIVEKHSR LLC ICQS TPWTAT
Sbjct: 1   MKK-KCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVIPQNVASLQIHHHQDNRHSASPTSRDLADDDEDNQVVPLSPPPIS 138
           G KL PT+S+CQ C+  QN  +    +HQD+         D  ++D++NQVVPLSPPP+S
Sbjct: 61  GRKLSPTISVCQSCLNAQNNVA---DNHQDSSDGYRRDDDD--NNDDENQVVPLSPPPVS 115

Query: 139 S 140
           S
Sbjct: 121 S 115

[Close]

BLAST of ClCG03G005420 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-25
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 23 KCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
          KC+LCN  A  YCESD+ASLCW CD  VH ANF+V KH+R LLC  CQS TPW ATG +L
Sbjct: 4  KCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63

Query: 83 GPTLSLCQFCVIPQN 98
          GPT S+C+ CV  +N
Sbjct: 64 GPTFSVCESCVALKN 78

[Close]

BLAST of ClCG03G005420 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 59/127 (46.46%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 19  MKKIKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           M K KCELC   A  YCESD+ASLCW CD  VH ANF+V KH R LLC  CQS TPW A+
Sbjct: 1   MGKKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKAS 60

Query: 79  GPKLGPTLSLCQFCVI--PQNVASLQIHHHQDNR-------HSASPTSRDLADDDE---- 132
           G  LGPT+S+C+ C+     N +SL       N+       +  + +  + +D+DE    
Sbjct: 61  GLNLGPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEE 120

[Close]

BLAST of ClCG03G005420 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 61.2 bits (147), Expect = 7.4e-10
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 22 IKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPT 74
          + CELC   A  YCE+D A LC +CD  VHSANF+  +H R ++C  C+  T
Sbjct: 30 VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of ClCG03G005420 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 60.8 bits (146), Expect = 9.7e-10
Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 23 KCELCNC-RANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQ-SPTPWTATGP 82
          +C+ C   +A  YC+SD A LC  CD NVHSAN + ++H+R LLC+ C   PT       
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC--- 63

Query: 83 KLGPTLSLCQFC 93
           +   +SLCQ C
Sbjct: 64 -MNENVSLCQGC 71

[Close]

BLAST of ClCG03G005420 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 22 IKCELCNCRANAYCESDEASLCWRCDANVHSANFIVEKHSRILLCQICQSPT 74
          ++CELC+  A+ +CE+D A LC +CD  VH ANF+  +H R +LC  CQ  T
Sbjct: 29 VRCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

The following BLAST results are available for this feature:

BLAST of ClCG03G005420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895968.1	9.3e-63	84.72	zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida]	[more]
XP_008441923.1	1.0e-61	84.51	PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box ...	[more]
KAE8652697.1	7.6e-57	80.00	hypothetical protein Csa_014317 [Cucumis sativus]	[more]
XP_023542180.1	1.1e-36	67.23	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573228.1	2.5e-36	66.94	putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma s...	[more]

BLAST of ClCG03G005420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3I2	1.0e-08	48.08	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
O23379	1.4e-08	43.06	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LRM4	1.8e-08	48.08	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9LUA9	3.0e-08	35.58	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q96502	3.0e-08	32.00	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]

BLAST of ClCG03G005420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTR2	5.0e-62	84.51	B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4I3	5.0e-62	84.51	B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 S...	[more]
A0A0A0LS80	5.1e-51	80.80	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 ...	[more]
A0A6J1GR34	2.6e-34	65.29	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JY69	9.8e-34	64.46	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of ClCG03G005420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27310.1	2.8e-25	64.00	B-box type zinc finger family protein	[more]
AT5G54470.1	1.2e-23	46.46	B-box type zinc finger family protein	[more]
AT4G15248.1	7.4e-10	48.08	B-box type zinc finger family protein	[more]
AT4G15250.1	9.7e-10	43.06	B-box type zinc finger protein with CCT domain	[more]
AT3G21890.1	1.3e-09	48.08	B-box type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 19..65 e-value: 3.1E-7 score: 40.1
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 20..63 e-value: 1.2E-5 score: 25.4
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 19..65 score: 9.015373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..139
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 19..137
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 19..137
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 23..65 e-value: 1.10199E-10 score: 51.5295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G005420.1	ClCG03G005420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding