ClCG03G005140 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCCTCTCATCTCTGTAACTCCACATCGCCGCGGCTTCTCGGGTCGATCTTCATCCTCGTCGAAGCTTTTCCACAAATAAGCTGACATTTTCTCCAAGACGGTGATCGACGGAAGGTGAATCAGAAACAGAGTACCTCTCCCTTCTCCTACATACGCAAAATTTTGACATATTTACAAATAATTGCTTCACTTTTTCCATTTGTTTCTTTCCGAAACTTTGAGCTCTTTCTAGAACTATTTTCCTTTCCTTTCTTGCCCTTACCCTCCAACTTCACACGTCACACGTGTCATAATTAGTTCTATACTGATGTTTTGTTTCGTTTCCACTTTTCAATTATTTTTGTAGTACAACTATTGAAACAGATAGATCTAATCTCCGATTTTAAACGACTCCGAACTAAGTTTATTTGAAGGGTTGAATTACAATTTTAATTAAACTTTCTAACTTTTTACTTTTCTAATTAATATATATTTTAAGAGTGGTTTTGGATCAAAATCATAAATTTAATTAATAAAGAAAAAAGAAATTTGAATCGGAATCAAGATAGGATCATAACAAGCCAAGAAAGGGATCCAACTCCCTACCAGCCTCGACCTACCCCACCTCCTTGGCCTCGACCTTTTGTTTAGAAAACAAATGTGTTCTTTGATGCCTAAATATCATTTAATTCTTTCAATATTCTTACACATATTCTACTTTGTTTCAAATATTTTTCTTGGGTAGTTTGTTATCATAAGAAGGAGGAGATTGTTAGTTTTATGAGCTTCAATCATACCGCGAGTTTTCATTATAATGAACATTTATGTATTGATGACTTTGTCCAACTGTGGAACTCGAATGAACATTTTCAACACATTTTAAATCACTCAAATTAAACATTAAAAAAAAAAAAAAGTTGATGACATGACACTTGGATCAATTCGTGCATGACATGGCGGTTAGATCAATTTGTGCATATAATTTGAATGCTACCATCAAACCCTTTAGCTTCCGCCTCTCTCTGCATGGGACTTAATTATTAAAATTTATACAAAGTTATTAGAATTTGAAAAATTATCTTATGACGTCAAGTATAATTAATTTCTTCGCTTATTTAAATGAAGCAATTCAGTTATTGTACAGAATAAAAAACTTTGATATCTTTCTTCCTTGCTGATTTCATCTCAGAGCTCTGTTATTAGGCTTACAGTAGGGCGGCACCGATTTTAAAAGAATCTGAAAGCGTTAGAAAATTTCTTCGGATCCTGTTCATTCCTTAACTCCCATGGAAGGCATCTGCATCCAAAAATAGAAGAAGAAAAAAAAAAAGAAAAGAAAAAAGGAGTTCTACAGAAAGCAAAGAAGCTTTTTTGAAAAATTTGTCGCCAAAGATGATTCCTTTCATTTATGTAATAGTGCAAGCCTGGGTTTCCTTTATTCCATCTTCCCTGTCTCCAATTCAGAGCTTTAAACCCTTTTCCCGCAATTACAAATCTCGGGGAAAGCTCTGAATCCGCTACAGAAATGGCGCGAAACTATGGCTTTCTAGTCTGCATTTTGGTCATGGCAATCGACGCTGTTGCCGGAATACTTGGCATTCAAGCTGAAAAGGCTCAGAATCGGGTATTGCTGAAGTAAAGTGAAAAGAAGTAGTCATGTATGGCTCGCTGGTGATGTTTATCAAAATATGCATATAAATTGTTCGACGTATTTCCTATTTCAGGTGGTACTAAATTCGGTGAGTATATGGGTGCGTGAATGCCGGAGAAAGCCGAGAGACGATGCTTTTAGTCAGGGGCTGGCTGCAACCATTCTCCTTGGCCTTGCTCATGTCATTGCTAAAGTACTTGGTGGATGCATTTGCATTAGGAATAAGCAACATTTCCAAGAATCATCTGCAAACAAGCGATTGGGATTGCTCTTCATGATTCTCTCATGGTGAGTCTTATCCTCTCCTAGCCTTTTAAGCATTACCATTTGAAGTTTTGTTGAAAAATAGTTTTTCAGATATTATTCAACCTACGGAGTTATTCAATTCAATTTAGGTAATCTTGGATGATTTTAAATAAAACCCAAATTTGATGGAAGTGTTCTTCTCTTTGGCTGAAATATTAGGATTACTTTGGCTATTGGGTTATCATTGTTGATAGCTGGGACGGTGGACAATTCCAAGTGGAAAAACTCGTGTGAGATATCAAGTCATGGCCTGTTTTTGGGTGGTGGGATAGTGTGTTTCATTCATGGGCTCTCTACTGTCGCTTATTACGTTTCTGCAACAGCAGCTTATAGAGAAGAACAGAGGAAGCCCAAAGCAAATCCTTCTGAACCACAACATGTATAA ATGAGGGCCTCTCATCTCTGTAACTCCACATCGCCGCGGCTTCTCGGGTCGATCTTCATCCTCTGCAAGCCTGGGTTTCCTTTATTCCATCTTCCCTGTCTCCAATTCAGAGCTTTAAACCCTTTTCCCGCAATTACAAATCTCGGGGAAAGCTCTGAATCCGCTACAGAAATGGCGCGAAACTATGGCTTTCTAGTCTGCATTTTGGTCATGGCAATCGACGCTGTTGCCGGAATACTTGGCATTCAAGCTGAAAAGGCTCAGAATCGGGTGGTACTAAATTCGGTGAGTATATGGGTGCGTGAATGCCGGAGAAAGCCGAGAGACGATGCTTTTAGTCAGGGGCTGGCTGCAACCATTCTCCTTGGCCTTGCTCATGTCATTGCTAAAGTACTTGGTGGATGCATTTGCATTAGGAATAAGCAACATTTCCAAGAATCATCTGCAAACAAGCGATTGGGATTGCTCTTCATGATTCTCTCATGGATTACTTTGGCTATTGGGTTATCATTGTTGATAGCTGGGACGGTGGACAATTCCAAGTGGAAAAACTCGTGTGAGATATCAAGTCATGGCCTGTTTTTGGGTGGTGGGATAGTGTGTTTCATTCATGGGCTCTCTACTGTCGCTTATTACGTTTCTGCAACAGCAGCTTATAGAGAAGAACAGAGGAAGCCCAAAGCAAATCCTTCTGAACCACAACATGTATAA ATGAGGGCCTCTCATCTCTGTAACTCCACATCGCCGCGGCTTCTCGGGTCGATCTTCATCCTCTGCAAGCCTGGGTTTCCTTTATTCCATCTTCCCTGTCTCCAATTCAGAGCTTTAAACCCTTTTCCCGCAATTACAAATCTCGGGGAAAGCTCTGAATCCGCTACAGAAATGGCGCGAAACTATGGCTTTCTAGTCTGCATTTTGGTCATGGCAATCGACGCTGTTGCCGGAATACTTGGCATTCAAGCTGAAAAGGCTCAGAATCGGGTGGTACTAAATTCGGTGAGTATATGGGTGCGTGAATGCCGGAGAAAGCCGAGAGACGATGCTTTTAGTCAGGGGCTGGCTGCAACCATTCTCCTTGGCCTTGCTCATGTCATTGCTAAAGTACTTGGTGGATGCATTTGCATTAGGAATAAGCAACATTTCCAAGAATCATCTGCAAACAAGCGATTGGGATTGCTCTTCATGATTCTCTCATGGATTACTTTGGCTATTGGGTTATCATTGTTGATAGCTGGGACGGTGGACAATTCCAAGTGGAAAAACTCGTGTGAGATATCAAGTCATGGCCTGTTTTTGGGTGGTGGGATAGTGTGTTTCATTCATGGGCTCTCTACTGTCGCTTATTACGTTTCTGCAACAGCAGCTTATAGAGAAGAACAGAGGAAGCCCAAAGCAAATCCTTCTGAACCACAACATGTATAA MRASHLCNSTSPRLLGSIFILCKPGFPLFHLPCLQFRALNPFPAITNLGESSESATEMARNYGFLVCILVMAIDAVAGILGIQAEKAQNRVVLNSVSIWVRECRRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESSANKRLGLLFMILSWITLAIGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLSTVAYYVSATAAYREEQRKPKANPSEPQHV Homology
BLAST of ClCG03G005140 vs. NCBI nr
Match: XP_038894860.1 (uncharacterized protein LOC120083260 [Benincasa hispida]) HSP 1 Score: 341.3 bits (874), Expect = 6.8e-90 Identity = 171/179 (95.53%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of ClCG03G005140 vs. NCBI nr
Match: XP_022139993.1 (uncharacterized protein LOC111010766 [Momordica charantia]) HSP 1 Score: 318.2 bits (814), Expect = 6.1e-83 Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0
BLAST of ClCG03G005140 vs. NCBI nr
Match: KAG6573220.1 (hypothetical protein SDJN03_27107, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 299.7 bits (766), Expect = 2.3e-77 Identity = 151/179 (84.36%), Postives = 162/179 (90.50%), Query Frame = 0
BLAST of ClCG03G005140 vs. NCBI nr
Match: XP_023542772.1 (uncharacterized protein LOC111802580 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.7 bits (761), Expect = 8.6e-77 Identity = 150/181 (82.87%), Postives = 162/181 (89.50%), Query Frame = 0
BLAST of ClCG03G005140 vs. NCBI nr
Match: XP_022994470.1 (uncharacterized protein LOC111490180 [Cucurbita maxima]) HSP 1 Score: 296.2 bits (757), Expect = 2.5e-76 Identity = 149/181 (82.32%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of ClCG03G005140 vs. ExPASy TrEMBL
Match: A0A0A0LRQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066490 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.8e-89 Identity = 176/221 (79.64%), Postives = 190/221 (85.97%), Query Frame = 0
BLAST of ClCG03G005140 vs. ExPASy TrEMBL
Match: A0A6J1CGZ6 (uncharacterized protein LOC111010766 OS=Momordica charantia OX=3673 GN=LOC111010766 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 3.0e-83 Identity = 165/208 (79.33%), Postives = 175/208 (84.13%), Query Frame = 0
BLAST of ClCG03G005140 vs. ExPASy TrEMBL
Match: A0A6J1K198 (uncharacterized protein LOC111490180 OS=Cucurbita maxima OX=3661 GN=LOC111490180 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 1.2e-76 Identity = 149/181 (82.32%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of ClCG03G005140 vs. ExPASy TrEMBL
Match: A0A6J1GRM8 (uncharacterized protein LOC111456841 OS=Cucurbita moschata OX=3662 GN=LOC111456841 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.9e-75 Identity = 147/178 (82.58%), Postives = 159/178 (89.33%), Query Frame = 0
BLAST of ClCG03G005140 vs. ExPASy TrEMBL
Match: A0A1S3B4I4 (uncharacterized protein LOC103485708 OS=Cucumis melo OX=3656 GN=LOC103485708 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 3.8e-70 Identity = 144/181 (79.56%), Postives = 155/181 (85.64%), Query Frame = 0
BLAST of ClCG03G005140 vs. TAIR 10
Match: AT4G21310.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 176.8 bits (447), Expect = 2.1e-44 Identity = 89/165 (53.94%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of ClCG03G005140 vs. TAIR 10
Match: AT2G32280.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 151.4 bits (381), Expect = 9.3e-37 Identity = 73/164 (44.51%), Postives = 109/164 (66.46%), Query Frame = 0
BLAST of ClCG03G005140 vs. TAIR 10
Match: AT1G11500.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33 Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of ClCG03G005140 vs. TAIR 10
Match: AT1G05291.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 73.2 bits (178), Expect = 3.2e-13 Identity = 55/178 (30.90%), Postives = 86/178 (48.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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