ClCG03G004820 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G004820
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	15.4 kDa class V heat shock protein
Location	CG_Chr03: 5094632 .. 5095723 (+)
RNA-Seq Expression	ClCG03G004820
Synteny	ClCG03G004820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCAAGGCTGCCGCAACTTGCAAAAAGATCCAAATTTGTATTTAAAGGTTGGAAGAGCATCTTAAGAACCCTATCCACTCCGAGTCTCGCCGGCCCCGCCGAAAAAAACCGCGAAACAAAAATCTTCCTATCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACTACTCATTTCCTCCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCACAATTACGTTCACTGGGTTCAAACCTCCGATTCTCATCTCTTCTCCGCCGATCTCCCCGGTACGTTCAATTTTTCCGATTCCTTTCTTCTTCTAGGTTTCTCGTGCTCATTAAATTTCTTAATCTTTTTTTTTTCTTTTTTCTGGTTGGTTAATTTGATGTGTAGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGGTTCCGGCGAAGAGTTTCTCCAGGAAGTTTCGTCTTCCGGTTTTGGTGGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTTAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTGCTTGCTAGGGCTGCTTGATCAATAGCTGATTGATCATTTGGGATTTCGAGTTTGCTGCCTCCGCCTTCTCTTTTCCGTTTCGTTGGCTGCAAATGGCGAAATTTCAAGCTCTGTATTGTTGATTTGTGATGAATAGGAAGAATTTTATGTAGTAGTAGTATCAACAGATTGTTGGGTTTGGAAGTGTAGGATTGATCTTTCATTGACCGAAGTGGAATTTGGACTGCTTGATGTTTATTCAAATACGTTTTATGAGTTCTCTCTGTCAAGTGGATTACGTTACTTTATTAACTGCCATTGAAGGGATGAAACTTGTCTTTGTTATCGATTTGATGGAGCAGCCTTTTTGGAACGAGACAACATGTAATATTTTGATTTTACAAGACTTTACACATTACCAATGAGATGGTGAGTTTTCTCTAAGGATATTAATCAATTAAAATTATTATTATTATTATTATTAT

mRNA sequence

ATGCCCTCAAGGCTGCCGCAACTTGCAAAAAGATCCAAATTTGTATTTAAAGGTTGGAAGAGCATCTTAAGAACCCTATCCACTCCGAGTCTCGCCGGCCCCGCCGAAAAAAACCGCGAAACAAAAATCTTCCTATCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACTACTCATTTCCTCCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCACAATTACGTTCACTGGGTTCAAACCTCCGATTCTCATCTCTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGGTTCCGGCGAAGAGTTTCTCCAGGAAGTTTCGTCTTCCGGTTTTGGTGGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTTAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTGCTTGCTAGGGCTGCTTGATCAATAGCTGATTGATCATTTGGGATTTCGAGTTTGCTGCCTCCGCCTTCTCTTTTCCGTTTCGTTGGCTGCAAATGGCGAAATTTCAAGCTCTGTATTGTTGATTTGTGATGAATAGGAAGAATTTTATGTAGTAGTAGTATCAACAGATTGTTGGGTTTGGAAGTGTAGGATTGATCTTTCATTGACCGAAGTGGAATTTGGACTGCTTGATGTTTATTCAAATACGTTTTATGAGTTCTCTCTGTCAAGTGGATTACGTTACTTTATTAACTGCCATTGAAGGGATGAAACTTGTCTTTGTTATCGATTTGATGGAGCAGCCTTTTTGGAACGAGACAACATGTAATATTTTGATTTTACAAGACTTTACACATTACCAATGAGATGGTGAGTTTTCTCTAAGGATATTAATCAATTAAAATTATTATTATTATTATTATTAT

Coding sequence (CDS)

ATGCCCTCAAGGCTGCCGCAACTTGCAAAAAGATCCAAATTTGTATTTAAAGGTTGGAAGAGCATCTTAAGAACCCTATCCACTCCGAGTCTCGCCGGCCCCGCCGAAAAAAACCGCGAAACAAAAATCTTCCTATCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACTACTCATTTCCTCCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCACAATTACGTTCACTGGGTTCAAACCTCCGATTCTCATCTCTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGGTTCCGGCGAAGAGTTTCTCCAGGAAGTTTCGTCTTCCGGTTTTGGTGGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTTAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTGCTTGCTAGGGCTGCTTGA

Protein sequence

MPSRLPQLAKRSKFVFKGWKSILRTLSTPSLAGPAEKNRETKIFLSTMEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSVIHSPDQLLARAA

Homology

[Close]

BLAST of ClCG03G004820 vs. NCBI nr
Match: ADU55781.1 (HSP15 [Citrullus lanatus])

HSP 1 Score: 265.0 bits (676), Expect = 4.7e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 168 IHSPDQLLARAA 180
           IHSPDQLLARAA
Sbjct: 121 IHSPDQLLARAA 132

[Close]

BLAST of ClCG03G004820 vs. NCBI nr
Match: XP_038894889.1 (15.4 kDa class V heat shock protein [Benincasa hispida])

HSP 1 Score: 254.6 bits (649), Expect = 6.3e-64
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTSNPSSLH SFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHNSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVL+DVD ISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLIDVDGISAGFENGVLEITVPRSFRRSSV 120

Query: 168 IHSPD--QLLARAA 180
           IHSPD  QLLARAA
Sbjct: 121 IHSPDQLQLLARAA 134

[Close]

BLAST of ClCG03G004820 vs. NCBI nr
Match: XP_022933175.1 (15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kDa class V heat shock protein [Cucurbita pepo subsp. pepo] >KAG6584081.1 15.4 kDa class V heat shock protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019683.1 15.4 kDa class V heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 114/137 (83.21%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS+P+SLH S  PRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 168 IHSPD-----QLLARAA 180
           IH  D     QLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of ClCG03G004820 vs. NCBI nr
Match: XP_023001317.1 (15.4 kDa class V heat shock protein [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-54
Identity = 117/137 (85.40%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS+ +SLH S PPRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFR  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 168 IH---SPD--QLLARAA 180
           IH   SPD  QLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of ClCG03G004820 vs. NCBI nr
Match: XP_004145106.1 (15.4 kDa class V heat shock protein [Cucumis sativus] >KGN64532.1 hypothetical protein Csa_013988 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS P          LLFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 167
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120

Query: 168 VIHSPD--QLLARAA 180
           V+HSPD  QLLARAA
Sbjct: 121 VVHSPDQHQLLARAA 127

[Close]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot
Match: O49710 (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 78  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTVPAKSFSRKFR 137
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 138 LPVLVDVDAISAGFENGVLEITVPRSFRRSSVIHSPD-----QLLARAA 180
           LP  +D+  ISAG+E+GVL + VP+      +I   D     QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot
Match: Q7EZ57 (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 78  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTVPA------KSFS 137
           ++V W +T+ +HL+SA LPGVRKEEI+VEVED+ YL+IRTE  DG           +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFA 114

Query: 138 RKFRLPVLVDVDAISAGFENGVLEITVPRSFRRS 166
           RKFRLP +VD D ISA + +GVL +TVPR   R+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPRLHTRA 148

[Close]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot
Match: P27777 (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 162
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKA 136

[Close]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot
Match: Q943E6 (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 162
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKA 136

[Close]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot
Match: Q05832 (18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-14
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           + W +T ++H+F ADLPGV+KEE+KVEVED   L I          + +    V   +  
Sbjct: 57  IDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQ 116

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 162
           F RKFRLP    VD + AG ENGVL +TVP++
Sbjct: 117 FMRKFRLPENAKVDQVKAGMENGVLTVTVPKN 148

[Close]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL
Match: H6TB34 (HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.3e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 168 IHSPDQLLARAA 180
           IHSPDQLLARAA
Sbjct: 121 IHSPDQLLARAA 132

[Close]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL
Match: A0A6J1F477 (15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111440034 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.8e-55
Identity = 114/137 (83.21%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS+P+SLH S  PRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 168 IHSPD-----QLLARAA 180
           IH  D     QLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL
Match: A0A6J1KG72 (15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 117/137 (85.40%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS+ +SLH S PPRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 167
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFR  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 168 IH---SPD--QLLARAA 180
           IH   SPD  QLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL
Match: A0A0A0LUT8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.8e-52
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 48  MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 107
           MEISTS P          LLFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 108 EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 167
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120

Query: 168 VIHSPD--QLLARAA 180
           V+HSPD  QLLARAA
Sbjct: 121 VVHSPDQHQLLARAA 127

[Close]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL
Match: A0A6J1CFU3 (15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC111010826 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.7e-51
Identity = 116/140 (82.86%), Postives = 120/140 (85.71%), Query Frame = 0


Query: 45  LSTMEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIK 104
           LSTMEI  SN  SL   FPP LL+PY+HY IP NYVHWVQT DSH+FSADLPGVRKEEIK
Sbjct: 23  LSTMEI--SNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIK 82

Query: 105 VEVEDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRR 164
           VEVEDSRYLIIRTEAVDGV   AKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRR
Sbjct: 83  VEVEDSRYLIIRTEAVDGVEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRR 142

Query: 165 SSVI---HSPD--QLLARAA 180
           +SVI    SPD  QLLARAA
Sbjct: 143 ASVILPTDSPDQLQLLARAA 160

[Close]

BLAST of ClCG03G004820 vs. TAIR 10
Match: AT4G21870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 8.1e-25
Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 78  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTVPAKSFSRKFR 137
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 138 LPVLVDVDAISAGFENGVLEITVPRSFRRSSVIHSPD-----QLLARAA 180
           LP  +D+  ISAG+E+GVL + VP+      +I   D     QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of ClCG03G004820 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-15
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  
Sbjct: 48  VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGG 107

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPR 161
           FSRKFRLP  V +D + A  ENGVL +TVP+
Sbjct: 108 FSRKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of ClCG03G004820 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  
Sbjct: 50  VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 109

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPR 161
           FSRKF+LP  V +D + A  ENGVL +TVP+
Sbjct: 110 FSRKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of ClCG03G004820 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVTVPAKS 139
           V W +T ++H+F ADLPG+RKEE+KVEVED   L I  E  +           V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSVIHSPD 173
           F+R+FRLP    ++ I A  ENGVL +TVP+   +   + S D
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSID 154

[Close]

BLAST of ClCG03G004820 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 80  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTVPAKS 139
           V W +T ++H+F ADLPG++KEE+KVE+E+   L I          + +    V   +  
Sbjct: 48  VDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQ 107

Query: 140 FSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSVIHS 171
           F+R+FRLP  V +D + A  ENGVL +TVP++  + + + S
Sbjct: 108 FTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKS 148

The following BLAST results are available for this feature:

BLAST of ClCG03G004820 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55781.1	4.7e-67	100.00	HSP15 [Citrullus lanatus]	[more]
XP_038894889.1	6.3e-64	96.27	15.4 kDa class V heat shock protein [Benincasa hispida]	[more]
XP_022933175.1	1.2e-54	83.21	15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kD...	[more]
XP_023001317.1	3.5e-54	85.40	15.4 kDa class V heat shock protein [Cucurbita maxima]	[more]
XP_004145106.1	1.6e-51	84.44	15.4 kDa class V heat shock protein [Cucumis sativus] >KGN64532.1 hypothetical p...	[more]

BLAST of ClCG03G004820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49710	1.1e-23	55.96	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 P...	[more]
Q7EZ57	1.2e-20	54.26	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P27777	2.1e-14	43.48	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q943E6	2.1e-14	43.48	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q05832	2.8e-14	44.57	18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1	[more]

BLAST of ClCG03G004820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB34	2.3e-67	100.00	HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1F477	5.8e-55	83.21	15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC11144003...	[more]
A0A6J1KG72	1.7e-54	85.40	15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 ...	[more]
A0A0A0LUT8	7.8e-52	84.44	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 S...	[more]
A0A6J1CFU3	1.7e-51	82.86	15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]

BLAST of ClCG03G004820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21870.1	8.1e-25	55.96	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	5.8e-15	43.96	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.3e-14	42.86	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	2.9e-14	40.78	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	6.4e-14	37.62	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 82..162 e-value: 7.3E-15 score: 55.0
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 71..177 score: 19.320559
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 54..168 e-value: 6.1E-22 score: 79.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 59..161
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 48..171
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 48..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G004820.2	ClCG03G004820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding