ClCG03G003200 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGATTATCCTGAGCAAAATAAGTTGTGCCTTTCCGAAGTAGATTCAGACTCTCATCAAGATTTGAAGTCAAATTTGACAGGTTTTTTAATCTTATTCGTGAATCATACAATCACCAACTTTAACATTAGTGTTTCCTTCCTCCAAAATCAAGTAAATTCAGGCAAGTTAGATCGTGATATAAAGGATATATGTTTGAGGCTTGTATTGGAGATTTTCAATTAGGGATTGATGATTTACGAGAAACTTTTGCATATGTTACTAACAGAAAATAGTATAATTATTGATCATTTACCACTTCTTAATATTGTTGATATGTAAGTGGGTGTGATCAAGATTTTGATGGACATCCAGTGCCTCGTTATAAAACTTCAAGGGCATTCTTGGATCTTGGATTGGCAATGACGAATCTCATGTTATGTAATCGTGTAGAGGCATGTATACCAACCTCTTTTTGGTTCAACCATATGTTGTTACCAATAAATTTATATAAATGAAATATAAATTGTGTTGTATGAACCTATGTAGTTTAGTTGAACTAAAAAAGTCAATTAAATGAATGCGTTCTTCAAAAGGTATGTGGTTCGAATCTCCCTACCTCTACCATATTTAAAAAGTTGGACTAATATATATATATATATAACAGTATTGCGTATATATTTGTTAAAAAAAATTCATTTTCTTTTTAAAGTTTATTCGTGATACGCTCAATTGTGATCATTATTTCCATCATACTTAATTAAGTCATTCAAGGAACATCTTCAGCATTATTTGAGTTAATTAACTCAAGGGTAGAATCAAACCGAATATAACTCAATTGGTATACAAATGTGTTAGTAACCACGAAATATGTGATTCGAATCTTCTTGTACTAAAGAAACCTTATATTAAAAATGCAAATGCAGGAACATTTAGGTTAAAATAACAATTATTTTTTTTTTCAAAAGGTTAGGAAGTTGAATCCGAAGTGAATCGAACACACAATCTTCTGATTTGGAGTTAGACGCGCTACCATTGCGCCACGGATCCAATTGGGTGTCTAATTGAAATTTGTTCAATTATTTTAGCCCACTTGGAGTGGAGAGGGAGGAGAGAGAGTTCCTTTTTTCAGAATAAGGTGTGATTTTTTTTTCTTTTTTCTATTATTAGTTTTTAA ATGATTGATTATCCTGAGCAAAATAAGTTGTGCCTTTCCGAAGTAGATTCAGACTCTCATCAAGATTTGAAGTCAAATTTGACAGGTTTTTTAATCTTATTCGTGAATCATACAATCACCAACTTTAACATTAGTGTTTCCTTCCTCCAAAATCAAGTAAATTCAGGCAAGTTAGATCGTGATATAAAGGATATATGTTTGAGGCTTGGATTGATGATTTACGAGAAACTTTTGCATATGTTACTAACAGAAAATAGTATAATTATTGATCATTTACCACTTCTTAATATTGTTGATATTGGGTGTGATCAAGATTTTGATGGACATCCAGTGCCTCGTTATAAAACTTCAAGGGCATTCTTGGATCTTGGATTGGCAATGACGAATCTCATTTTTTAA ATGATTGATTATCCTGAGCAAAATAAGTTGTGCCTTTCCGAAGTAGATTCAGACTCTCATCAAGATTTGAAGTCAAATTTGACAGGTTTTTTAATCTTATTCGTGAATCATACAATCACCAACTTTAACATTAGTGTTTCCTTCCTCCAAAATCAAGTAAATTCAGGCAAGTTAGATCGTGATATAAAGGATATATGTTTGAGGCTTGGATTGATGATTTACGAGAAACTTTTGCATATGTTACTAACAGAAAATAGTATAATTATTGATCATTTACCACTTCTTAATATTGTTGATATTGGGTGTGATCAAGATTTTGATGGACATCCAGTGCCTCGTTATAAAACTTCAAGGGCATTCTTGGATCTTGGATTGGCAATGACGAATCTCATTTTTTAA MIDYPEQNKLCLSEVDSDSHQDLKSNLTGFLILFVNHTITNFNISVSFLQNQVNSGKLDRDIKDICLRLGLMIYEKLLHMLLTENSIIIDHLPLLNIVDIGCDQDFDGHPVPRYKTSRAFLDLGLAMTNLIF Homology
BLAST of ClCG03G003200 vs. NCBI nr
Match: KAG6572380.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 2.1e-19 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of ClCG03G003200 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 102.1 bits (253), Expect = 3.9e-18 Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 0
BLAST of ClCG03G003200 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.9 bits (250), Expect = 8.6e-18 Identity = 61/136 (44.85%), Postives = 82/136 (60.29%), Query Frame = 0
BLAST of ClCG03G003200 vs. NCBI nr
Match: KAA0055284.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative invertase inhibitor [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.9e-17 Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of ClCG03G003200 vs. NCBI nr
Match: KAG6572388.1 (hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-15 Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 0
BLAST of ClCG03G003200 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 9.3e-18 Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of ClCG03G003200 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.0e-08 Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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