ClCG03G002330 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G002330
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr03: 2686797 .. 2692109 (+)
RNA-Seq ExpressionClCG03G002330
SyntenyClCG03G002330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGACGGCCGATCATGATTGAGCTGGAATCATGGACCATGTGGTCTTAGAAGGCAGGACTTACATGTGAAATTTGATATCAGAACCACAAAGCGTCTTAGTCAGACCAAGCAGATTGAAAACCAATCTGTTTTGATTTCTGTCTTCCCAAATGTAGTTGTGTATCCATTGAAGGTTTAAGACTGACAGGTGCCATCTACTAAAAAGTTAAAAACCTATGATTTATATAGTTCTACATTGAGAAGACTACTGGGGAATCGTCATTCAATTGTGGCTACTCGGCTTATAGCTGGTACATACCTTTTGTGGCTACACACGGCTTATAAATGCTACAAAAATTAATCAATCAGTGAGGTTAGCCTCTTGAGACTATTTTAATAGTTCTTTTCAATGACTTCAAAGAAATTTAAACAGTACTTGAAGCACTTTGACCTAGTTCTTTCACATTATAATAGGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGTACTTTTGCAAGCTGAGTTCATTTAACATTGATTTTTTGCTTGAAGAGCCAATAAAGAAAGTTATCCAAGTATAGGTTGTGTAAAAGATTACTCTCTGCACAGTGTGCACACTGACACATGGATTATCCCAAATACCAGTCCAGGAGGATAGTGCTCGATGTGTAGGTTCAATCTAGGTTAAATTGCATATTTGGTCTTTATGGTTTGGAAAAAGTGAGAATTTAGTCCTTATAGTTTATAACTAGAATTGAGTCCCTATGGTTTGATAAAGTCCTCGAAAATAGTCCCTACGCTAGGGACTTTCTATGATGATTTTATCAAATCATAGGAATCATTTATGAGGTTTCATCAAACCATTAGAACTAAATTCTAACTTTTAAAATTAATTATAGGGACTGTATTCCAACTTTCTTATAGGGATCAAATTTGTAATTTAACCTAGCGTTTACTAATCTGATCATGCTACTGAATGACTGTGAAGTGTGAAGATTAGTAACCTAGTGTACTAGTCATCAGCCAATCCCAAAATGGGCAAAGACATGTAATAAATATAGGACAAGTGCAGAAAGAAGAAAGCATTTATTAGAACTATATAATATCACAGGTAAAATTTTATTTGAGGATAATAAATTATGTATATCCGATTCCTTGGATAAAAAAAATTTGTATCACAGAATCTTGATGGTCATTTTGGCTGAAATAAATATTAGATTAGATTACCACTTGATTTTACTGGCCACAATCACCATTATCAACCTTTACAACAATTTGGGAAGATATTCTTAAAACCTAAGGAGGCAATGCATTGTTTCAATCTTTTACTAGTAGATTGGTGTCTAGTAGAATTTGCATTTAAGAACATGAAACATTGTAAGTAGACCAAATGTATGTTTATGATCTGAGAAATTGACCTCATTGTGTAAATTCAATTATGAAGTTAAACTTTGTATTGAGCGAATAAAAATGATACATGAAGACGATTTTATGTGTAGCAATAAGGCAATAGCAAATAATATTACCCATAAGAATTTGTATTTAATAACATGAAAAGTTGAAGTCAAGCTTGCTTATTTGGATATGTTTAAAACATATGGTTAAGACATCTTTTACTATCTATATCAATTATTTGAAGGGAAAGAAGGGTCAAACATTGGAATGAGAAGGTTATTTTTTAGGTGGGTAATTGTTATAAATGACAAAATTGTTGGAAATATTTATGAATATAGCAAAATGTCACTTCTATCAATGGTAGACAATGAAAGATATTGATGGACATCTATCAGTTTAATGGACAATGATATATGATAGTAGTTTAATTAGTGATAGACATGATATTTTGTTATATTTGTAAATATTTTGGCTCATTTTGCTATCTTTTAAAACAACACTTTGTATGTGATTAAAGTGGATAGAAATAACTACGAAGCAATAAAATCTCTTATTCTTTTTAAAATGGTGGTGGATTTGGTAATCAATTCAAAACCTAGGTTTTTGTGATTCAGTGAAGTTTAGATGTTTAATATTACAAGTCAACTATCTCTAACGAGTTTTTTCTTACCAAATAAATATGGTTAAACTACAATTTTCGTTTTTGAATTCTGCTTTCATTGACTACCCAAAATTTTGGGTCCAAATAAAATACAATGAAGTCTTTCCCAAGATTTTTTCTTTTTTTTTAAAAAAAGATCCGTCTCTCTTCTCTCTTTTCTTGCTCTCATATTTTCTACCTCCCCTTTTGACTTGTCTCTTCAGGGACATCCGATAAAATTAGAGTGATATCTCCCTTTTTGACTTTTCTCCCTCTCATCTCCTTCCTCCCACATTCTCATCTTTTCTATGTCCCCCTTTGTCTCCTCTCCCCAATTAGAAACAAGAAGTCGTTCAAGATCGAGAGCACGAAAAGAACATGGGTGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATTGAGAGCATGACTGCGATTTAGAGCAAGAGTGCGAGCAAGATTTGAGAGCGACAACAAAATTAAGGAGGTGTATATTAACGAGAGCCTCTAGTACATTTTTACTTGTTATTCACCATCACAAAATATTATACAACCTTATTTTCAAAACATGGGTCAGATTCCAATTCAACTAAAAAATTTGGGTCATCCATACAAAATCCCCTTTAAACTTTTAGCTTGTATCTAAACGGTTCTTGAACTTTAAAGTGTAGTGTATAACAAGTTTCTAAACTTTCAATTTTGTACCAAATAAGTCGCTGATATTCAAAAGTTTTAAAAATTAACTAATATATTAAATGTAAAATTGACTTTTATGTTCAACAAGACTCTTCACTTTCAATTTAGTGTTTAGTTGGTCAGTAAATTTTAAACTAGGTTAAATAGATCAAGAAACATATTTGACACAATTAAAATTTGAGAGACATGTTGGACATAAAGTTGAAAGTTTAAGGATTAATACCTTTTTAAAAAGTTCAATGATCTATTAAATGCTTTCTAAATTTCATGGATCAAATAGACACAAACGCCAAAATTTGGAAACCAAACTTGCAATTTAGCCAACAAATAATCTTTGCTTCCTTCTAGTGAATAGACCATTGGTTTATTAATCAGCCTGTTATATTGATATTCATTTCATTTTCATGTCAAATCTTGTTAGTTATCAAAAGATTGTTGTTACAAAAGGGAAGTCTAGGATTGAACCTTTCCTAAAGATTATGAGATAAAAATAGAAGTCCAAATACCAAGATGGAAACCATACAACAAGACTTAGCACCAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATGAACTTATCATGAATCTGTTCAATCCCTCAAAATCAATAGAGCCTCTCAATTCTGGTTTAGATGTAGATAAAAAAATTTAAGTTTAAATAACATTTTAGTCACGTTTGATCAATTTTAGTCTCTATACTTTTGTGCATCGAAAAGGCTTTCCTATTCAAGTTACATTTAGCTACCATTCATTGCCAAACTAAAGCTAGCTCACTCACAAAACACATACGTCATCATGTGGAAGACTAAGTGTTGTGAAGACTGGTTAACTAGATGATCCATTACTCAAAATTAGCTCATTCACAAAACACAAATCATCATGAATGACATAAATGCACTTCTCTTTGTTGGAATCAACTCCTAGTTCTTTAGTAGCAATCGGCTAAGGTTCAATGCTTCTTCTTTTGTCTAGATTGCCAAAAAAATCTTTAAGCTTAAAATACTCCGTAAAAAATTGTTAAGCACATTCAATAATTTCTACTTACAAAGCAACAAACAAAGAAAACAAAGCACCTTCCTGTTCAAATTTGGATTGTTTGCAAATTTAAAATATTGTTATTATGAGCTACAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

mRNA sequence

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

Coding sequence (CDS)

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

Protein sequence

MNLLLRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVYSSVIETSLWELNYKISSPKEACDPFMPLSHQVQGFKGAAAGLMER
Homology
[Close]
BLAST of ClCG03G002330 vs. NCBI nr
Match: XP_038893505.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 734.2 bits (1894), Expect = 6.7e-208
Identity = 363/390 (93.08%), Postives = 374/390 (95.90%), Query Frame = 0 

Query: 3   LLLRLCIQHSWRLN-THHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRR 62
           L LR    HSW LN  +HGN++HFLP SQI+S+PAPNL FTKFCLNFYSNRAPSRSFRRR
Sbjct: 28  LCLRRFSIHSWWLNELNHGNITHFLPPSQIRSHPAPNLFFTKFCLNFYSNRAPSRSFRRR 87

Query: 63  ASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRF 122
           ASKRLKSS+KPTLD+TQFQ AVSQIPPRFTSEELCNVISLQG+PLVCFELFNWASQQPRF
Sbjct: 88  ASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRF 147

Query: 123 RHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAIN 182
           RHDVSTY ITIKKLGEAKMYEEMDHVVNQVL+VPSIGSETLYNTMIYFFTEARKLTRAIN
Sbjct: 148 RHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAIN 207

Query: 183 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD 242
           IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD
Sbjct: 208 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD 267

Query: 243 IFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELC 302
           IFTLN MIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELC
Sbjct: 268 IFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELC 327

Query: 303 KEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQ 362
            EMKEKGF+PS ISYNSIVNAMALNGEVEEAVNYLWEMID+RRSPDFITYRTVLDE CRQ
Sbjct: 328 NEMKEKGFVPSGISYNSIVNAMALNGEVEEAVNYLWEMIDNRRSPDFITYRTVLDEQCRQ 387

Query: 363 GRVGEATSLLRELQEKDLVDGHTYRKLLYV 392
           GRVGEATSLLRELQEKDLVDGHTYRKLLYV
Sbjct: 388 GRVGEATSLLRELQEKDLVDGHTYRKLLYV 417

[Close]
BLAST of ClCG03G002330 vs. NCBI nr
Match: XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 703.0 bits (1813), Expect = 1.6e-198
Identity = 347/381 (91.08%), Postives = 362/381 (95.01%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HS  LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSNRAPSRSFRRRASKRLKS +
Sbjct: 38  HSLLLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+SQIPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALR+FHQMGVVYS LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCRQGRVGEATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of ClCG03G002330 vs. NCBI nr
Match: XP_008463631.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463637.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463644.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 699.9 bits (1805), Expect = 1.4e-197
Identity = 345/382 (90.31%), Postives = 361/382 (94.50%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HS  L NTHH NL+HFL +SQIQ+YPAPNLSFTKFCLNFYS  APSRSFRRRA+KRLK+S
Sbjct: 38  HSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKAS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKPTLDE QFQLAVS+IPPRFT EEL NVISLQ +PLVCFELFNWASQQPRF+HDVS+Y+
Sbjct: 98  LKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINH+YMETIRCLFRQMVNDDGIEPDIF LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+SYDYLIHGL AQ RTDNARELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNAMALNGEVE+AVNYLWEMID RRSPDFITY+TVLDELCR GRV EATS
Sbjct: 338 VPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of ClCG03G002330 vs. NCBI nr
Match: KAG6583499.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.1 bits (1803), Expect = 2.4e-197
Identity = 347/390 (88.97%), Postives = 363/390 (93.08%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HSW LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSN APSRSFRRRASKRLKS +
Sbjct: 38  HSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+SQIPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNK 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYIN MYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALRIFHQMGVVYS LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCR+GRVGEATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYVYSSVIETSL 401
           LRE+QEK+LVDGHTYRKLLYV       SL
Sbjct: 398 LREVQEKELVDGHTYRKLLYVLEDDYGNSL 426

[Close]
BLAST of ClCG03G002330 vs. NCBI nr
Match: XP_022965006.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 698.4 bits (1801), Expect = 4.0e-197
Identity = 345/381 (90.55%), Postives = 361/381 (94.75%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HSW LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSN APSRSFRRRASKRLKS +
Sbjct: 38  HSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+SQIPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNK 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYIN MYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALRIFHQMGVVYS LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCR+GRVGEATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match: Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 459.9 bits (1182), Expect = 3.2e-128
Identity = 219/343 (63.85%), Postives = 275/343 (80.17%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ +P +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++KGYVLSLH+NDALRIFHQM VVY C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
           CAQGRT NAREL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 349 ITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYV 392
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +Y KL+ V
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNV 437

[Close]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match: Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-47
Identity = 110/354 (31.07%), Postives = 193/354 (54.52%), Query Frame = 0 

Query: 38  NLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCN 97
           +LSF+    +  S+ +PSR   R            T  ETQF+  +  + P FT+ ++  
Sbjct: 33  SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSI 157
            +  Q +P +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V+A    
Sbjct: 93  ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152

Query: 158 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAY 217
            S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L R     
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212

Query: 218 INHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLP 277
           + ++Y+  +R L +QM   +G+ PD F LN +IK Y   L +++A+R+F +M  +Y   P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272

Query: 278 NSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYL 337
           N+++Y YL+ G+C +GR        KEM+ KG +P+   Y  ++ ++++   ++EAV  +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332

Query: 338 WEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDG-HTYRKLL 390
           ++M+ +  SPD +TY TVL ELCR GR  EA  ++ E +++D V G   YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-25
Identity = 76/248 (30.65%), Postives = 121/248 (48.79%), Query Frame = 0 

Query: 132 IKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRN 191
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 192 LNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKG 251
            +  P + TY  + + F   G       ++ E   C         G+EPD  T   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 252 YVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMP 311
           Y  + H+ DA R+ + M +   C PN  +Y  LI GLC +G  D+A EL  EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 312 SSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLL 371
           +  +YNSIVN +  +G +EEAV  + E   +  + D +TY T++D  C+ G + +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 372 RELQEKDL 380
           +E+  K L
Sbjct: 569 KEMLGKGL 557

[Close]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-24
Identity = 75/279 (26.88%), Postives = 143/279 (51.25%), Query Frame = 0 

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVV--NQVLAVP 157
           +I+ Q +PL+  E+F++ASQQP FRH  S++ I I KLG  + +  +D V+  ++    P
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 158 SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNA 217
             G   ++  +I  + EA+   + ++ F  M      N  P  +  N +    +S     
Sbjct: 117 LTGE--IFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVS----- 176

Query: 218 YINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCL 277
             +  Y++    LF+      G+ P+  + N +++ + L+  ++ A ++F +M +    +
Sbjct: 177 --HRGYLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVV 236

Query: 278 PNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNY 337
           P+  SY  LI G C +G+ + A EL  +M  KGF+P  +SY +++N++    ++ EA   
Sbjct: 237 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 296

Query: 338 LWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLREL 375
           L  M     +PD + Y T++   CR+ R  +A  +L ++
Sbjct: 297 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321

[Close]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.3e-24
Identity = 69/228 (30.26%), Postives = 115/228 (50.44%), Query Frame = 0 

Query: 163 YNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYM 222
           YN ++    +  +L  AI     M ++    C+P++ T+N++  +  S GR      +  
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSS---GCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 223 ETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYD 282
           + +R          G  P + T N +I        +  A+ I  +M   + C PNS SY+
Sbjct: 337 DMLR---------KGFSPSVVTFNILINFLCRKGLLGRAIDILEKM-PQHGCQPNSLSYN 396

Query: 283 YLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDS 342
            L+HG C + + D A E  + M  +G  P  ++YN+++ A+  +G+VE+AV  L ++   
Sbjct: 397 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 456

Query: 343 RRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDL-VDGHTYRKLL 390
             SP  ITY TV+D L + G+ G+A  LL E++ KDL  D  TY  L+
Sbjct: 457 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

[Close]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match: A0A6J1I0J8 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469407 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 8.0e-199
Identity = 347/381 (91.08%), Postives = 362/381 (95.01%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HS  LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSNRAPSRSFRRRASKRLKS +
Sbjct: 38  HSLLLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+SQIPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALR+FHQMGVVYS LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCRQGRVGEATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match: A0A1S3CJQ6 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 6.7e-198
Identity = 345/382 (90.31%), Postives = 361/382 (94.50%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HS  L NTHH NL+HFL +SQIQ+YPAPNLSFTKFCLNFYS  APSRSFRRRA+KRLK+S
Sbjct: 38  HSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKAS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKPTLDE QFQLAVS+IPPRFT EEL NVISLQ +PLVCFELFNWASQQPRF+HDVS+Y+
Sbjct: 98  LKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINH+YMETIRCLFRQMVNDDGIEPDIF LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+SYDYLIHGL AQ RTDNARELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNAMALNGEVE+AVNYLWEMID RRSPDFITY+TVLDELCR GRV EATS
Sbjct: 338 VPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match: A0A6J1HKI7 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464950 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 2.0e-197
Identity = 345/381 (90.55%), Postives = 361/381 (94.75%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HSW LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSN APSRSFRRRASKRLKS +
Sbjct: 38  HSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+SQIPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNK 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYIN MYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALRIFHQMGVVYS LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCR+GRVGEATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match: A0A0A0LS50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 7.4e-197
Identity = 340/382 (89.01%), Postives = 359/382 (93.98%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HSW L NTHH NL HFL +SQI  Y  PNLSFT F L FYS  APSRSFR+RA+KRLKSS
Sbjct: 38  HSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKP LDETQFQLAVS+IPPRFTSEELCNVISLQ +PLVCFELFNWASQQPRFRHD S+Y+
Sbjct: 98  LKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINHMYMETIRCLFRQMVNDDGIEPDIF+LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+S+DYLIHGLCAQ RTDNA+ELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNA+ALNGEVE+AVNYLWEMID+RRSPDFITY+TVLDELCRQG+V EATS
Sbjct: 338 VPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match: A0A6J1DY00 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024542 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 2.0e-194
Identity = 343/387 (88.63%), Postives = 362/387 (93.54%), Query Frame = 0 

Query: 5   LRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASK 64
           LR    HS  LN++HGN   FL LSQI++ P P +SFTKF LNF+S+RAPSRSFRRRASK
Sbjct: 29  LRTFSTHSSLLNSNHGNCRSFLLLSQIRNCPVPVVSFTKFRLNFFSSRAPSRSFRRRASK 88

Query: 65  RLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHD 124
           RLKSS+KP+LDET FQ AVSQIPPRF+ EELCNVISLQ +P+VCFELFNWASQQPRFRHD
Sbjct: 89  RLKSSIKPSLDETLFQAAVSQIPPRFSPEELCNVISLQEDPMVCFELFNWASQQPRFRHD 148

Query: 125 VSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK 184
           VSTY+ITIKKLGEAKM+EEMD VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK
Sbjct: 149 VSTYEITIKKLGEAKMFEEMDDVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK 208

Query: 185 HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFT 244
           HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFT
Sbjct: 209 HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFT 268

Query: 245 LNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEM 304
           LNCMIKGYVLSLHINDALRIFHQMGVVYS LPNSFSYDYLIHGLCAQGRTDNARELC EM
Sbjct: 269 LNCMIKGYVLSLHINDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQGRTDNARELCNEM 328

Query: 305 KEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRV 364
           KEKGF+PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRS DF+TYRTVLDE+CRQGRV
Sbjct: 329 KEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSADFVTYRTVLDEMCRQGRV 388

Query: 365 GEATSLLRELQEKDLVDGHTYRKLLYV 392
           GEAT+LLRELQEKDLVDGHTYRKL YV
Sbjct: 389 GEATNLLRELQEKDLVDGHTYRKLCYV 414

[Close]
BLAST of ClCG03G002330 vs. TAIR 10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.3e-129
Identity = 219/343 (63.85%), Postives = 275/343 (80.17%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ +P +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++KGYVLSLH+NDALRIFHQM VVY C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
           CAQGRT NAREL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 349 ITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYV 392
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +Y KL+ V
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNV 437

[Close]
BLAST of ClCG03G002330 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 302.8 bits (774), Expect = 4.6e-82
Identity = 174/393 (44.27%), Postives = 228/393 (58.02%), Query Frame = 0 

Query: 23  SHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLA 82
           S  LP SQI+      L+    C   YS   P+RS RRR S R KSS KP L+E++FQ  
Sbjct: 43  SSSLPQSQIEG----RLASVSMCTQ-YSTSVPTRSLRRRISSRKKSSTKPILNESKFQET 102

Query: 83  VSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYE 142
           +S++PPRFT EEL + I+L+ +P +CF LFNWASQQPRF H+  +Y I I+KLG AK   
Sbjct: 103 ISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK--- 162

Query: 143 EMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYN 202
                                         + KL RA+NIF+HM N+RNL CRP++RTY+
Sbjct: 163 ------------------------------SGKLIRAVNIFRHMVNSRNLECRPTMRTYH 222

Query: 203 LLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDAL 262
           +LF A L RG N++INH+YMET+R LFRQMV D GIEPD+F LNC++K            
Sbjct: 223 ILFKALLGRGNNSFINHLYMETVRSLFRQMV-DSGIEPDVFALNCLVK------------ 282

Query: 263 RIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNA 322
                                        GRT N REL  EMK KGF+P+  SYNS+VNA
Sbjct: 283 -----------------------------GRTINTRELLSEMKGKGFVPNGKSYNSLVNA 342

Query: 323 MALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDG 382
            AL+GE+++AV  LWEMI++ R  DFI+YRT++DE CR+G+  EAT LL  L+EK LVD 
Sbjct: 343 FALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDI 355

Query: 383 HTYRK--------LLYVYSSVIETSLWELNYKI 408
            +  K        L+ ++SS++ +   E  Y I
Sbjct: 403 DSDDKLKMYQMVILVLLFSSMLPSVCDESRYMI 355

[Close]
BLAST of ClCG03G002330 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 299.7 bits (766), Expect = 3.9e-81
Identity = 166/367 (45.23%), Postives = 218/367 (59.40%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+E++FQ  +S++PPRFT EEL + I+L+ +P +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AK                             
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
               + KL RA+NIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++K                                      
Sbjct: 269 FRQMV-DSGIEPDVFALNCLVK-------------------------------------- 328

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
              GRT N REL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 329 ---GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 380

Query: 349 ITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRK--------LLYVYSSVIETSL 408
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +  K        L+ ++SS++ +  
Sbjct: 389 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDIDSDDKLKMYQMVILVLLFSSMLPSVC 380

[Close]
BLAST of ClCG03G002330 vs. TAIR 10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-48
Identity = 110/354 (31.07%), Postives = 193/354 (54.52%), Query Frame = 0 

Query: 38  NLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCN 97
           +LSF+    +  S+ +PSR   R            T  ETQF+  +  + P FT+ ++  
Sbjct: 33  SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSI 157
            +  Q +P +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V+A    
Sbjct: 93  ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152

Query: 158 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAY 217
            S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L R     
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212

Query: 218 INHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLP 277
           + ++Y+  +R L +QM   +G+ PD F LN +IK Y   L +++A+R+F +M  +Y   P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272

Query: 278 NSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYL 337
           N+++Y YL+ G+C +GR        KEM+ KG +P+   Y  ++ ++++   ++EAV  +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332

Query: 338 WEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDG-HTYRKLL 390
           ++M+ +  SPD +TY TVL ELCR GR  EA  ++ E +++D V G   YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of ClCG03G002330 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-26
Identity = 76/248 (30.65%), Postives = 121/248 (48.79%), Query Frame = 0 

Query: 132 IKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRN 191
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 192 LNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKG 251
            +  P + TY  + + F   G       ++ E   C         G+EPD  T   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 252 YVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMP 311
           Y  + H+ DA R+ + M +   C PN  +Y  LI GLC +G  D+A EL  EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 312 SSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLL 371
           +  +YNSIVN +  +G +EEAV  + E   +  + D +TY T++D  C+ G + +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 372 RELQEKDL 380
           +E+  K L
Sbjct: 569 KEMLGKGL 557

The following BLAST results are available for this feature:
BLAST of ClCG03G002330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893505.16.7e-20893.08pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benin... [more]
XP_022970418.11.6e-19891.08pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_008463631.11.4e-19790.31PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
KAG6583499.12.4e-19788.97Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022965006.14.0e-19790.55pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
BLAST of ClCG03G002330 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUY13.2e-12863.85Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
Q9LSF52.8e-4731.07Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... [more]
Q0WVK73.9e-2530.65Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q8LDU51.5e-2426.88Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q3EDF83.3e-2430.26Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
BLAST of ClCG03G002330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I0J88.0e-19991.08pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A1S3CJQ66.7e-19890.31pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A6J1HKI72.0e-19790.55pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A0A0LS507.4e-19789.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1[more]
A0A6J1DY002.0e-19488.63pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordic... [more]
BLAST of ClCG03G002330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27800.12.3e-12963.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G27300.24.6e-8244.27pentatricopeptide (PPR) repeat-containing protein [more]
AT5G27300.13.9e-8145.23pentatricopeptide (PPR) repeat-containing protein [more]
AT3G25210.12.0e-4831.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.12.7e-2630.65Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 276..323
e-value: 4.7E-11
score: 42.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 345..373
e-value: 1.9E-7
score: 30.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 163..208
e-value: 2.1E-4
score: 21.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 349..379
e-value: 9.7E-5
score: 20.3
coord: 314..347
e-value: 5.3E-4
score: 18.0
coord: 279..312
e-value: 1.7E-7
score: 29.0
coord: 243..277
e-value: 2.2E-4
score: 19.2
coord: 162..189
e-value: 0.0023
score: 16.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 243..268
e-value: 0.023
score: 14.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 10.084454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 12.682281
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 9.88715
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 61..216
e-value: 2.4E-17
score: 65.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 217..414
e-value: 7.6E-39
score: 135.9
NoneNo IPR availablePANTHERPTHR47932:SF23PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEINcoord: 44..394
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 44..394

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G002330.1ClCG03G002330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051641 cellular localization
cellular_component GO:0031083 BLOC-1 complex
molecular_function GO:0005515 protein binding